View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8773_low_7 (Length: 313)
Name: NF8773_low_7
Description: NF8773
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8773_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 14 - 295
Target Start/End: Original strand, 24984370 - 24984648
Alignment:
| Q |
14 |
tactacagtgtgtgtaagtcggccagtgatttgttcattctctaaaatggttgatttcgaaatgattttcatctcggccatttatgctcgacttctcatc |
113 |
Q |
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| T |
24984370 |
tactacagtgtgtgtaagtcggccagtgatttgttcattctctaaaatggttgatttcgaaatgattttcatctcggccatttatgctcgacttctcatc |
24984469 |
T |
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| Q |
114 |
tcattagacgccaattgtggctcgagttgtcttctaatctcatatcatttcttgttgcacttcagagaagtcaatctgaccattttcccgttggatattg |
213 |
Q |
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|||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
24984470 |
tcattagatgccaattgtggctcgagttgtctc---atctcatatcatttcttgttgcacttcagagaagtcaatctgaccattttccctttggatattg |
24984566 |
T |
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| Q |
214 |
aagaaatgtacacctttcctctttaaaattttataaaatgtggtttgatcatgcagatttcggaggcttgtagaagacgttt |
295 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24984567 |
aagaaatgtacacctttcctctttaaatttttataaaatgtggtttgatcatgcagatttcggaggcttgtagaagacgttt |
24984648 |
T |
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