View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8774_low_4 (Length: 355)

Name: NF8774_low_4
Description: NF8774
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8774_low_4
NF8774_low_4
[»] chr4 (97 HSPs)
chr4 (18-346)||(49218664-49218993)
chr4 (83-342)||(28330687-28330955)
chr4 (90-292)||(38319862-38320065)
chr4 (82-328)||(42132722-42132977)
chr4 (82-344)||(20964233-20964508)
chr4 (129-340)||(36047092-36047312)
chr4 (87-292)||(37315872-37316078)
chr4 (86-332)||(8759685-8759937)
chr4 (83-284)||(32949794-32949999)
chr4 (88-225)||(53848664-53848802)
chr4 (87-278)||(22872337-22872530)
chr4 (85-292)||(22020460-22020667)
chr4 (174-339)||(54217240-54217411)
chr4 (88-342)||(4360360-4360619)
chr4 (87-244)||(39052852-39053009)
chr4 (88-285)||(49448797-49448994)
chr4 (174-290)||(29550765-29550881)
chr4 (101-287)||(42051621-42051807)
chr4 (91-343)||(41436375-41436633)
chr4 (156-284)||(55360367-55360498)
chr4 (161-290)||(10099749-10099879)
chr4 (88-284)||(34790903-34791100)
chr4 (88-343)||(46958615-46958875)
chr4 (87-235)||(48400582-48400730)
chr4 (123-290)||(44633109-44633277)
chr4 (83-174)||(54217439-54217532)
chr4 (88-292)||(5499384-5499586)
chr4 (153-244)||(35998133-35998225)
chr4 (178-292)||(17236994-17237108)
chr4 (174-246)||(11583909-11583981)
chr4 (88-292)||(13529813-13530017)
chr4 (126-283)||(38160141-38160301)
chr4 (161-284)||(3685970-3686094)
chr4 (123-273)||(25149421-25149573)
chr4 (161-284)||(29644314-29644438)
chr4 (133-247)||(3505718-3505832)
chr4 (90-284)||(18849713-18849907)
chr4 (201-292)||(22129136-22129227)
chr4 (161-290)||(28279790-28279920)
chr4 (161-244)||(37309697-37309781)
chr4 (178-283)||(41710186-41710291)
chr4 (190-283)||(43335077-43335170)
chr4 (87-246)||(47277632-47277792)
chr4 (256-331)||(53848239-53848319)
chr4 (174-290)||(4354401-4354517)
chr4 (91-284)||(41203695-41203889)
chr4 (88-202)||(18872606-18872718)
chr4 (161-245)||(27977145-27977230)
chr4 (90-283)||(39979740-39979933)
chr4 (161-246)||(47846896-47846981)
chr4 (178-284)||(54729526-54729631)
chr4 (121-244)||(49306586-49306710)
chr4 (87-284)||(8294990-8295185)
chr4 (178-244)||(26799258-26799324)
chr4 (161-284)||(34020994-34021120)
chr4 (178-244)||(42544208-42544274)
chr4 (255-292)||(5291640-5291677)
chr4 (161-233)||(28974316-28974389)
chr4 (178-235)||(30568667-30568724)
chr4 (178-284)||(42185838-42185944)
chr4 (177-246)||(50714579-50714648)
chr4 (191-247)||(9052105-9052161)
chr4 (87-210)||(25902412-25902536)
chr4 (190-283)||(32323624-32323717)
chr4 (174-222)||(33093497-33093545)
chr4 (174-246)||(37786958-37787030)
chr4 (184-244)||(39976438-39976498)
chr4 (113-247)||(29990449-29990583)
chr4 (101-223)||(35029055-35029177)
chr4 (161-284)||(48740479-48740603)
chr4 (123-290)||(49401609-49401777)
chr4 (177-247)||(25250634-25250704)
chr4 (178-244)||(39258314-39258380)
chr4 (178-247)||(10309297-10309366)
chr4 (175-285)||(29136828-29136938)
chr4 (196-244)||(29815157-29815205)
chr4 (88-289)||(40020897-40021102)
chr4 (256-292)||(42738452-42738488)
chr4 (87-230)||(52676982-52677125)
chr4 (184-235)||(18509454-18509505)
chr4 (255-343)||(33047392-33047486)
chr4 (87-244)||(38976990-38977148)
chr4 (88-151)||(41594799-41594862)
chr4 (178-244)||(1796284-1796350)
chr4 (182-244)||(42024247-42024309)
chr4 (184-233)||(283525-283574)
chr4 (255-292)||(388539-388576)
chr4 (255-292)||(25902596-25902633)
chr4 (255-292)||(44022000-44022037)
chr4 (255-284)||(47386118-47386147)
chr4 (255-284)||(48400749-48400778)
chr4 (180-244)||(1825292-1825356)
chr4 (256-292)||(4727467-4727503)
chr4 (255-283)||(18873071-18873099)
chr4 (161-228)||(38614987-38615055)
chr4 (257-285)||(40293511-40293539)
chr4 (256-284)||(49812188-49812216)
[»] chr3 (60 HSPs)
chr3 (80-342)||(46194150-46194418)
chr3 (87-342)||(1922990-1923242)
chr3 (88-343)||(30261455-30261715)
chr3 (91-343)||(9218039-9218297)
chr3 (91-342)||(39329705-39329962)
chr3 (91-332)||(48409489-48409738)
chr3 (87-244)||(1334732-1334889)
chr3 (89-290)||(53050979-53051180)
chr3 (87-343)||(38600757-38601018)
chr3 (104-247)||(41287258-41287402)
chr3 (90-284)||(51164911-51165105)
chr3 (88-280)||(44218986-44219177)
chr3 (86-342)||(21585360-21585622)
chr3 (88-287)||(32977742-32977941)
chr3 (81-187)||(36790765-36790872)
chr3 (90-235)||(54021412-54021557)
chr3 (177-284)||(3862213-3862319)
chr3 (178-284)||(21296545-21296651)
chr3 (91-187)||(24618882-24618979)
chr3 (161-284)||(32023125-32023249)
chr3 (107-345)||(53754034-53754280)
chr3 (91-292)||(42547061-42547262)
chr3 (121-285)||(5245370-5245535)
chr3 (156-235)||(29858884-29858964)
chr3 (87-285)||(2868532-2868730)
chr3 (87-292)||(17776945-17777150)
chr3 (87-292)||(19078246-19078451)
chr3 (161-292)||(8498206-8498337)
chr3 (161-247)||(52325173-52325260)
chr3 (197-284)||(41031531-41031618)
chr3 (87-284)||(33994616-33994813)
chr3 (184-233)||(36097703-36097752)
chr3 (178-283)||(15280565-15280670)
chr3 (177-284)||(46627966-46628070)
chr3 (258-332)||(41286952-41287030)
chr3 (177-284)||(27668368-27668474)
chr3 (181-247)||(45746362-45746428)
chr3 (176-246)||(47496166-47496236)
chr3 (171-225)||(49122169-49122223)
chr3 (191-290)||(50736054-50736153)
chr3 (191-290)||(50776702-50776801)
chr3 (255-292)||(26479949-26479986)
chr3 (255-292)||(36790992-36791029)
chr3 (178-235)||(53876478-53876535)
chr3 (87-234)||(9017810-9017957)
chr3 (165-244)||(54458337-54458417)
chr3 (255-290)||(36317717-36317752)
chr3 (178-244)||(26134745-26134811)
chr3 (190-228)||(36317359-36317397)
chr3 (178-244)||(43639558-43639624)
chr3 (178-244)||(46786023-46786089)
chr3 (88-130)||(47684854-47684896)
chr3 (180-225)||(10855012-10855057)
chr3 (178-235)||(11529153-11529210)
chr3 (255-284)||(43640684-43640713)
chr3 (183-235)||(7885751-7885803)
chr3 (195-235)||(16276458-16276498)
chr3 (177-225)||(35300655-35300703)
chr3 (183-247)||(45241007-45241071)
chr3 (161-244)||(54122248-54122332)
[»] chr8 (85 HSPs)
chr8 (80-343)||(14689854-14690124)
chr8 (87-342)||(45420889-45421152)
chr8 (80-326)||(14748647-14748903)
chr8 (81-292)||(886392-886604)
chr8 (91-342)||(2195363-2195620)
chr8 (83-292)||(25174531-25174741)
chr8 (88-292)||(33743726-33743932)
chr8 (87-326)||(1494198-1494442)
chr8 (89-290)||(29638254-29638455)
chr8 (120-245)||(41759613-41759739)
chr8 (89-290)||(28791261-28791462)
chr8 (86-225)||(8394202-8394344)
chr8 (88-344)||(2796932-2797195)
chr8 (83-225)||(8566060-8566200)
chr8 (87-289)||(42412334-42412536)
chr8 (91-290)||(40077705-40077904)
chr8 (87-236)||(39998170-39998319)
chr8 (101-290)||(14117415-14117604)
chr8 (127-284)||(41726480-41726638)
chr8 (184-292)||(32231768-32231876)
chr8 (80-187)||(32231329-32231437)
chr8 (87-284)||(5392007-5392205)
chr8 (145-287)||(32678991-32679134)
chr8 (101-342)||(10728885-10729132)
chr8 (88-343)||(2875040-2875299)
chr8 (161-247)||(1230387-1230473)
chr8 (87-289)||(27868276-27868478)
chr8 (155-285)||(37459308-37459439)
chr8 (90-247)||(7258321-7258478)
chr8 (85-209)||(9734117-9734240)
chr8 (174-292)||(11637090-11637209)
chr8 (182-284)||(44615411-44615513)
chr8 (161-292)||(8618079-8618211)
chr8 (174-292)||(8418340-8418461)
chr8 (152-290)||(38201406-38201544)
chr8 (178-284)||(4274341-4274447)
chr8 (87-284)||(32967228-32967425)
chr8 (88-244)||(44790374-44790530)
chr8 (178-283)||(3384492-3384599)
chr8 (90-245)||(26677067-26677227)
chr8 (178-283)||(32241466-32241571)
chr8 (178-284)||(31410650-31410756)
chr8 (121-244)||(28802766-28802890)
chr8 (174-225)||(17005963-17006014)
chr8 (174-225)||(17571234-17571285)
chr8 (177-292)||(33826186-33826297)
chr8 (197-285)||(45197569-45197657)
chr8 (92-245)||(15559086-15559239)
chr8 (161-246)||(44225945-44226031)
chr8 (119-235)||(5423146-5423263)
chr8 (125-222)||(5878215-5878312)
chr8 (161-282)||(5962497-5962619)
chr8 (178-284)||(33190951-33191057)
chr8 (178-235)||(42558623-42558680)
chr8 (256-292)||(8566526-8566562)
chr8 (255-332)||(9734477-9734560)
chr8 (177-331)||(15020579-15020738)
chr8 (176-240)||(17790110-17790174)
chr8 (199-284)||(36012035-36012120)
chr8 (87-233)||(12653697-12653843)
chr8 (161-247)||(23764962-23765049)
chr8 (177-292)||(29451299-29451415)
chr8 (180-284)||(29615757-29615861)
chr8 (131-216)||(325110-325196)
chr8 (182-244)||(33925130-33925192)
chr8 (178-244)||(39171542-39171608)
chr8 (177-242)||(18725910-18725975)
chr8 (177-246)||(27987655-27987724)
chr8 (177-246)||(28044957-28045026)
chr8 (177-246)||(29567202-29567271)
chr8 (165-283)||(44975775-44975896)
chr8 (161-284)||(13084972-13085099)
chr8 (177-236)||(18733392-18733451)
chr8 (178-244)||(22490390-22490456)
chr8 (113-292)||(43844860-43845040)
chr8 (178-244)||(45425484-45425550)
chr8 (161-241)||(7042754-7042835)
chr8 (255-284)||(26570278-26570307)
chr8 (177-246)||(27875183-27875252)
chr8 (256-284)||(138809-138837)
chr8 (256-284)||(138992-139020)
chr8 (256-284)||(22325075-22325103)
chr8 (255-291)||(23550980-23551016)
chr8 (256-284)||(29730988-29731016)
chr8 (87-139)||(37459446-37459497)
[»] chr1 (114 HSPs)
chr1 (80-342)||(29756086-29756358)
chr1 (79-332)||(26583633-26583893)
chr1 (136-343)||(2886065-2886279)
chr1 (83-292)||(24131349-24131557)
chr1 (82-292)||(37925188-37925403)
chr1 (82-228)||(26924066-26924213)
chr1 (83-332)||(37541060-37541320)
chr1 (127-329)||(31798325-31798535)
chr1 (86-282)||(46363360-46363558)
chr1 (82-233)||(40754360-40754511)
chr1 (100-247)||(27932797-27932945)
chr1 (87-342)||(29225356-29225620)
chr1 (101-340)||(29225650-29225896)
chr1 (125-292)||(33149225-33149392)
chr1 (127-292)||(44580467-44580633)
chr1 (80-195)||(3160631-3160747)
chr1 (83-228)||(5503435-5503579)
chr1 (88-284)||(4466107-4466303)
chr1 (83-292)||(10587529-10587738)
chr1 (101-290)||(14352519-14352711)
chr1 (87-284)||(11425821-11426018)
chr1 (87-284)||(16040036-16040233)
chr1 (89-247)||(27209921-27210079)
chr1 (156-290)||(52382406-52382542)
chr1 (90-292)||(705303-705506)
chr1 (101-291)||(36232755-36232945)
chr1 (123-290)||(12267618-12267786)
chr1 (83-174)||(26760346-26760437)
chr1 (90-287)||(27831801-27831997)
chr1 (174-330)||(50333842-50334004)
chr1 (197-290)||(16451584-16451677)
chr1 (197-290)||(16460737-16460830)
chr1 (87-289)||(3718802-3719002)
chr1 (87-235)||(34813925-34814073)
chr1 (88-292)||(2219401-2219604)
chr1 (91-292)||(2571315-2571514)
chr1 (190-287)||(20988537-20988634)
chr1 (92-231)||(27391359-27391498)
chr1 (87-204)||(16956582-16956700)
chr1 (161-283)||(17342788-17342911)
chr1 (119-292)||(52146648-52146817)
chr1 (88-235)||(50267391-50267538)
chr1 (176-292)||(18186247-18186362)
chr1 (156-247)||(19349015-19349106)
chr1 (161-284)||(34877115-34877238)
chr1 (161-247)||(40988271-40988358)
chr1 (190-286)||(5359322-5359417)
chr1 (87-292)||(14090593-14090793)
chr1 (177-235)||(40061817-40061875)
chr1 (88-187)||(50773301-50773398)
chr1 (152-244)||(25983644-25983737)
chr1 (177-246)||(45305850-45305919)
chr1 (178-284)||(48242633-48242739)
chr1 (87-284)||(49494115-49494311)
chr1 (88-247)||(40019755-40019914)
chr1 (87-202)||(50926788-50926904)
chr1 (161-235)||(5115850-5115925)
chr1 (89-246)||(28706577-28706735)
chr1 (177-285)||(30903269-30903377)
chr1 (101-292)||(51049460-51049649)
chr1 (177-244)||(51749225-51749292)
chr1 (178-285)||(8327675-8327782)
chr1 (197-284)||(27698771-27698858)
chr1 (88-244)||(5442339-5442495)
chr1 (178-284)||(36784273-36784379)
chr1 (156-228)||(37281017-37281090)
chr1 (153-225)||(37495847-37495920)
chr1 (178-284)||(46536299-46536405)
chr1 (156-328)||(47293619-47293796)
chr1 (126-244)||(45889238-45889357)
chr1 (225-345)||(26760050-26760175)
chr1 (178-244)||(28839338-28839404)
chr1 (178-235)||(21304392-21304449)
chr1 (178-284)||(43895806-43895912)
chr1 (119-232)||(52146345-52146449)
chr1 (227-345)||(26924361-26924484)
chr1 (161-235)||(13500754-13500829)
chr1 (203-283)||(14358074-14358154)
chr1 (174-241)||(21304845-21304912)
chr1 (152-246)||(25842596-25842691)
chr1 (177-244)||(32587764-32587831)
chr1 (89-187)||(36326159-36326257)
chr1 (156-246)||(46273157-46273248)
chr1 (87-244)||(17724666-17724823)
chr1 (80-133)||(2886323-2886376)
chr1 (87-284)||(36467147-36467344)
chr1 (189-283)||(44657305-44657399)
chr1 (174-235)||(50086017-50086078)
chr1 (87-284)||(52830366-52830562)
chr1 (256-292)||(1859458-1859494)
chr1 (255-291)||(15290442-15290478)
chr1 (161-243)||(25819371-25819452)
chr1 (256-292)||(27932960-27932996)
chr1 (177-232)||(2246319-2246374)
chr1 (89-235)||(4659439-4659585)
chr1 (189-244)||(11324247-11324302)
chr1 (189-244)||(11482268-11482323)
chr1 (177-244)||(46496017-46496084)
chr1 (178-244)||(3555598-3555664)
chr1 (176-290)||(7075441-7075557)
chr1 (177-235)||(10707971-10708029)
chr1 (190-244)||(28908092-28908146)
chr1 (197-247)||(50926176-50926226)
chr1 (182-235)||(914755-914808)
chr1 (255-284)||(6784962-6784991)
chr1 (178-284)||(7785317-7785422)
chr1 (123-225)||(31634282-31634381)
chr1 (88-137)||(34332217-34332265)
chr1 (182-247)||(35622826-35622891)
chr1 (200-290)||(45048985-45049075)
chr1 (177-210)||(49662798-49662831)
chr1 (165-244)||(38664400-38664480)
chr1 (88-140)||(40988454-40988506)
chr1 (87-194)||(49944981-49945088)
[»] chr5 (83 HSPs)
chr5 (79-292)||(13087685-13087899)
chr5 (79-292)||(13016307-13016521)
chr5 (81-284)||(31090263-31090467)
chr5 (83-292)||(42818855-42819064)
chr5 (83-331)||(39060898-39061156)
chr5 (114-331)||(15898098-15898321)
chr5 (87-235)||(15564844-15564988)
chr5 (86-235)||(38978912-38979062)
chr5 (83-209)||(5147443-5147570)
chr5 (87-342)||(16926040-16926302)
chr5 (199-332)||(4194545-4194684)
chr5 (87-284)||(5357769-5357966)
chr5 (80-200)||(4194975-4195097)
chr5 (87-247)||(25111101-25111260)
chr5 (87-247)||(25170192-25170351)
chr5 (119-284)||(39035838-39036004)
chr5 (82-225)||(31196337-31196481)
chr5 (86-284)||(11099428-11099626)
chr5 (87-247)||(25108569-25108728)
chr5 (87-247)||(25167661-25167820)
chr5 (88-285)||(42575591-42575788)
chr5 (161-292)||(72130-72262)
chr5 (153-284)||(4044494-4044625)
chr5 (88-246)||(35988631-35988789)
chr5 (87-225)||(39060374-39060512)
chr5 (87-247)||(6172932-6173092)
chr5 (153-285)||(7871271-7871404)
chr5 (156-344)||(36006912-36007104)
chr5 (178-276)||(39183670-39183767)
chr5 (176-247)||(19889574-19889645)
chr5 (180-331)||(34534830-34534985)
chr5 (127-234)||(7311171-7311279)
chr5 (178-282)||(35585659-35585764)
chr5 (88-247)||(39212507-39212663)
chr5 (88-289)||(4475199-4475399)
chr5 (87-244)||(3725185-3725342)
chr5 (122-283)||(10044629-10044790)
chr5 (121-244)||(17242939-17243063)
chr5 (161-235)||(791984-792059)
chr5 (197-284)||(13422414-13422500)
chr5 (177-284)||(20189851-20189958)
chr5 (178-343)||(35334569-35334742)
chr5 (161-283)||(41184077-41184200)
chr5 (87-284)||(858294-858491)
chr5 (88-244)||(6610836-6610992)
chr5 (161-244)||(8369721-8369805)
chr5 (178-246)||(15254762-15254830)
chr5 (127-247)||(17741160-17741285)
chr5 (166-246)||(43525475-43525555)
chr5 (161-284)||(35646114-35646238)
chr5 (161-246)||(16283612-16283698)
chr5 (177-235)||(25344780-25344838)
chr5 (90-284)||(25814323-25814517)
chr5 (178-284)||(13135712-13135818)
chr5 (191-284)||(14184104-14184198)
chr5 (178-247)||(17699329-17699398)
chr5 (177-246)||(31956727-31956796)
chr5 (177-283)||(32659778-32659882)
chr5 (178-235)||(36446730-36446787)
chr5 (100-246)||(16883894-16884042)
chr5 (161-284)||(8692843-8692967)
chr5 (161-235)||(36469119-36469194)
chr5 (177-235)||(42158688-42158746)
chr5 (183-232)||(146748-146797)
chr5 (255-292)||(9426673-9426710)
chr5 (255-292)||(13597980-13598017)
chr5 (161-210)||(16954898-16954947)
chr5 (255-292)||(20369226-20369263)
chr5 (184-285)||(33012312-33012413)
chr5 (178-283)||(33988160-33988265)
chr5 (178-234)||(42211342-42211398)
chr5 (227-283)||(24534562-24534618)
chr5 (182-244)||(7179527-7179589)
chr5 (177-278)||(22982912-22983010)
chr5 (177-235)||(35666893-35666951)
chr5 (177-247)||(41268334-41268404)
chr5 (255-284)||(4412342-4412371)
chr5 (178-235)||(6735400-6735457)
chr5 (255-292)||(19889879-19889916)
chr5 (255-292)||(38978706-38978743)
chr5 (255-292)||(39212677-39212714)
chr5 (256-284)||(15814622-15814650)
chr5 (256-284)||(39008088-39008116)
[»] chr2 (91 HSPs)
chr2 (83-341)||(13221965-13222229)
chr2 (83-342)||(6972487-6972756)
chr2 (123-344)||(31348404-31348632)
chr2 (83-332)||(314340-314588)
chr2 (83-247)||(2048288-2048452)
chr2 (80-247)||(928482-928647)
chr2 (87-332)||(2427262-2427517)
chr2 (91-329)||(31592459-31592703)
chr2 (89-329)||(9472330-9472576)
chr2 (87-284)||(7213434-7213631)
chr2 (89-290)||(24356064-24356265)
chr2 (83-247)||(43427033-43427197)
chr2 (87-292)||(9724832-9725034)
chr2 (88-332)||(37529023-37529271)
chr2 (99-342)||(4282980-4283232)
chr2 (87-292)||(38872872-38873076)
chr2 (90-246)||(3199895-3200049)
chr2 (156-290)||(7931515-7931650)
chr2 (121-290)||(1908478-1908648)
chr2 (91-342)||(18181168-18181426)
chr2 (89-247)||(18460484-18460642)
chr2 (87-284)||(10069536-10069733)
chr2 (87-246)||(8550593-8550752)
chr2 (89-225)||(36748166-36748302)
chr2 (178-284)||(41436038-41436144)
chr2 (178-283)||(5212000-5212105)
chr2 (88-342)||(5425752-5426014)
chr2 (177-283)||(39095592-39095697)
chr2 (177-247)||(26273755-26273825)
chr2 (89-290)||(43182227-43182426)
chr2 (190-284)||(33880118-33880211)
chr2 (119-247)||(39166678-39166807)
chr2 (177-285)||(4794528-4794639)
chr2 (174-246)||(28844056-28844128)
chr2 (184-235)||(3487402-3487453)
chr2 (86-244)||(28108325-28108483)
chr2 (113-247)||(44424241-44424374)
chr2 (177-247)||(6213891-6213961)
chr2 (87-242)||(435027-435184)
chr2 (178-246)||(11726764-11726832)
chr2 (161-235)||(14384302-14384377)
chr2 (88-198)||(38280148-38280258)
chr2 (189-342)||(6075391-6075552)
chr2 (161-246)||(6723884-6723969)
chr2 (177-292)||(19515832-19515947)
chr2 (178-244)||(23684958-23685024)
chr2 (178-244)||(28301433-28301499)
chr2 (177-235)||(29937955-29938013)
chr2 (178-244)||(37247926-37247992)
chr2 (189-235)||(38282476-38282522)
chr2 (178-284)||(3100359-3100465)
chr2 (178-284)||(31546060-31546166)
chr2 (112-215)||(25604389-25604491)
chr2 (171-247)||(44024714-44024790)
chr2 (171-292)||(8385027-8385147)
chr2 (177-236)||(13026574-13026633)
chr2 (131-284)||(24451742-24451895)
chr2 (207-283)||(4043319-4043394)
chr2 (197-235)||(5711001-5711039)
chr2 (177-276)||(8031708-8031807)
chr2 (190-292)||(14887766-14887868)
chr2 (182-284)||(15859388-15859490)
chr2 (161-284)||(28572170-28572291)
chr2 (255-292)||(43427482-43427519)
chr2 (156-231)||(734031-734107)
chr2 (179-235)||(6685706-6685762)
chr2 (161-244)||(10818620-10818704)
chr2 (179-246)||(33602269-33602339)
chr2 (119-222)||(40710598-40710701)
chr2 (88-284)||(43077678-43077873)
chr2 (86-138)||(43950398-43950449)
chr2 (88-233)||(883105-883247)
chr2 (100-214)||(2882014-2882129)
chr2 (176-247)||(33275738-33275809)
chr2 (87-246)||(45464166-45464327)
chr2 (90-136)||(5007194-5007240)
chr2 (177-247)||(7420918-7420988)
chr2 (198-289)||(14136718-14136808)
chr2 (86-292)||(28925798-28926004)
chr2 (88-173)||(32556243-32556325)
chr2 (255-292)||(3199844-3199881)
chr2 (203-281)||(5007609-5007687)
chr2 (161-244)||(13375213-13375298)
chr2 (255-284)||(13375593-13375622)
chr2 (256-289)||(17154376-17154409)
chr2 (255-292)||(19009796-19009833)
chr2 (255-284)||(42881396-42881425)
chr2 (255-284)||(44534606-44534635)
chr2 (257-285)||(6723986-6724014)
chr2 (308-344)||(10394423-10394459)
chr2 (256-284)||(44194611-44194639)
[»] chr7 (76 HSPs)
chr7 (87-332)||(47238123-47238374)
chr7 (83-247)||(32971964-32972129)
chr7 (87-343)||(32775876-32776140)
chr7 (87-292)||(37264264-37264468)
chr7 (103-292)||(10355701-10355891)
chr7 (83-292)||(29996975-29997185)
chr7 (121-269)||(38589708-38589857)
chr7 (89-290)||(2849208-2849409)
chr7 (79-292)||(9602812-9603026)
chr7 (79-292)||(9830383-9830597)
chr7 (161-345)||(37496421-37496612)
chr7 (91-342)||(34064110-34064367)
chr7 (89-290)||(30659433-30659634)
chr7 (91-326)||(3667832-3668073)
chr7 (161-291)||(5068325-5068453)
chr7 (114-275)||(43007862-43008024)
chr7 (88-284)||(8149918-8150114)
chr7 (89-231)||(45218111-45218253)
chr7 (156-287)||(27337892-27338023)
chr7 (156-283)||(14648938-14649068)
chr7 (127-290)||(24288374-24288540)
chr7 (174-285)||(39343709-39343820)
chr7 (86-206)||(23111038-23111159)
chr7 (87-285)||(11616519-11616717)
chr7 (177-292)||(6591582-6591697)
chr7 (81-247)||(21446432-21446599)
chr7 (121-284)||(28333130-28333293)
chr7 (121-235)||(36070113-36070228)
chr7 (88-292)||(9658789-9658993)
chr7 (177-289)||(39498628-39498740)
chr7 (127-292)||(17265978-17266144)
chr7 (86-247)||(27621837-27621995)
chr7 (178-283)||(29257507-29257612)
chr7 (86-284)||(34963758-34963959)
chr7 (199-283)||(23111593-23111677)
chr7 (148-246)||(25778741-25778840)
chr7 (161-284)||(31581467-31581591)
chr7 (90-292)||(40023681-40023882)
chr7 (162-222)||(6838083-6838144)
chr7 (87-284)||(30462975-30463172)
chr7 (88-284)||(33773995-33774189)
chr7 (88-235)||(37490570-37490717)
chr7 (88-285)||(7425829-7426028)
chr7 (153-290)||(18731395-18731530)
chr7 (178-342)||(2846718-2846888)
chr7 (166-235)||(25940778-25940848)
chr7 (176-283)||(30462620-30462727)
chr7 (177-235)||(34001900-34001958)
chr7 (133-234)||(46095416-46095518)
chr7 (178-284)||(40590867-40590973)
chr7 (88-246)||(1101894-1102053)
chr7 (121-244)||(33584562-33584686)
chr7 (121-244)||(38181858-38181982)
chr7 (125-235)||(1643326-1643437)
chr7 (176-235)||(21412076-21412134)
chr7 (180-284)||(36117621-36117724)
chr7 (88-138)||(6697186-6697236)
chr7 (153-283)||(30459022-30459153)
chr7 (178-285)||(46288473-46288580)
chr7 (182-247)||(1099132-1099197)
chr7 (178-235)||(2842094-2842151)
chr7 (161-244)||(23186167-23186251)
chr7 (180-244)||(29434624-29434688)
chr7 (189-244)||(44604530-44604585)
chr7 (198-281)||(3781240-3781323)
chr7 (177-235)||(11726789-11726847)
chr7 (213-292)||(41059349-41059428)
chr7 (177-231)||(44682335-44682389)
chr7 (258-292)||(47453955-47453989)
chr7 (181-246)||(27242775-27242840)
chr7 (255-292)||(32345551-32345588)
chr7 (255-292)||(32972389-32972426)
chr7 (255-284)||(48981338-48981367)
chr7 (256-284)||(21412159-21412187)
chr7 (156-235)||(28923248-28923328)
chr7 (256-284)||(46095568-46095596)
[»] chr6 (31 HSPs)
chr6 (88-345)||(15371815-15372078)
chr6 (82-291)||(15325099-15325308)
chr6 (87-342)||(34803655-34803919)
chr6 (81-345)||(15351328-15351598)
chr6 (87-342)||(33921420-33921681)
chr6 (80-284)||(15321169-15321373)
chr6 (87-332)||(4552807-4553058)
chr6 (88-225)||(15355593-15355730)
chr6 (166-292)||(2310317-2310444)
chr6 (156-247)||(33017963-33018055)
chr6 (107-290)||(3166078-3166262)
chr6 (161-290)||(8232335-8232464)
chr6 (88-284)||(3604552-3604748)
chr6 (88-231)||(31075876-31076019)
chr6 (119-331)||(9354422-9354646)
chr6 (90-284)||(31265739-31265932)
chr6 (107-231)||(3874020-3874145)
chr6 (182-284)||(30063995-30064097)
chr6 (162-235)||(117087-117161)
chr6 (194-332)||(34441798-34441940)
chr6 (161-284)||(7301104-7301228)
chr6 (179-283)||(31723454-31723558)
chr6 (178-285)||(9755189-9755295)
chr6 (87-283)||(15081383-15081579)
chr6 (197-290)||(20027547-20027640)
chr6 (95-246)||(20383843-20383993)
chr6 (184-235)||(8569787-8569838)
chr6 (179-279)||(26356234-26356333)
chr6 (177-235)||(16126219-16126277)
chr6 (177-247)||(28538992-28539062)
chr6 (161-209)||(34915837-34915886)
[»] scaffold0221 (2 HSPs)
scaffold0221 (87-247)||(10740-10902)
scaffold0221 (161-244)||(8886-8970)
[»] scaffold0576 (1 HSPs)
scaffold0576 (88-225)||(583-720)
[»] scaffold0155 (2 HSPs)
scaffold0155 (158-292)||(7975-8110)
scaffold0155 (80-172)||(7865-7955)
[»] scaffold0685 (1 HSPs)
scaffold0685 (156-290)||(6419-6555)
[»] scaffold0086 (1 HSPs)
scaffold0086 (127-244)||(5817-5935)
[»] scaffold0262 (1 HSPs)
scaffold0262 (87-245)||(12386-12545)
[»] scaffold0009 (1 HSPs)
scaffold0009 (125-227)||(220009-220112)
[»] scaffold0003 (1 HSPs)
scaffold0003 (161-247)||(352485-352572)
[»] scaffold0007 (2 HSPs)
scaffold0007 (213-332)||(157932-158057)
scaffold0007 (169-284)||(230216-230331)
[»] scaffold0321 (1 HSPs)
scaffold0321 (87-283)||(9504-9696)
[»] scaffold0020 (1 HSPs)
scaffold0020 (177-281)||(171188-171292)
[»] scaffold0006 (1 HSPs)
scaffold0006 (91-244)||(229822-229974)
[»] scaffold0001 (1 HSPs)
scaffold0001 (178-244)||(394777-394843)
[»] scaffold0034 (1 HSPs)
scaffold0034 (88-244)||(98824-98980)
[»] scaffold0028 (1 HSPs)
scaffold0028 (178-235)||(26621-26678)
[»] scaffold0096 (1 HSPs)
scaffold0096 (199-244)||(4295-4340)
[»] scaffold0654 (1 HSPs)
scaffold0654 (189-247)||(2711-2769)
[»] scaffold0578 (2 HSPs)
scaffold0578 (90-136)||(4438-4484)
scaffold0578 (203-281)||(3991-4069)
[»] scaffold0058 (1 HSPs)
scaffold0058 (180-244)||(14455-14519)


Alignment Details
Target: chr4 (Bit Score: 257; Significance: 1e-143; HSPs: 97)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 18 - 346
Target Start/End: Original strand, 49218664 - 49218993
Alignment:
Q  18 cttgttgttaaagtatggttgttttagtgactggaaaatttggatatactccctccgtcccacccttgactcatttcacacttattaagaaaaggtgtat 117  Q
    |||||||||||| ||| |||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||    
T  49218664 cttgttgttaaattattgttgttttagtgactggaaaatttggttatactccctccttcccacccttggctcatttcacacttattaagaaaaagtgtat 49218763  T
Q  118 gagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctttatcataaattcaaagtagaatatattgaattgagagtgg 217  Q
     |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  49218764 aagtgaaagagagagaaaaatgggttagagtgcccttatcagctattggtgcattctctttatcataaattcaaagtataatatattgaattgagagtgg 49218863  T
Q  218 tgaaagtaatattaattaatgttataattg-nnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaattggacaatatttttgtgaaaatggc 316  Q
    ||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  49218864 tgaaagtaatattaattaatgttataattgaaaaaaaagtaattaatattgtattgaaaagtgaaatgagtcaattggacaatatttttgtgaaaatggc 49218963  T
Q  317 tcagttattatgggactgagagagtataat 346  Q
    |||||||||||||||||||| |||||||||    
T  49218964 tcagttattatgggactgagggagtataat 49218993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 83 - 342
Target Start/End: Complemental strand, 28330955 - 28330687
Alignment:
Q  83 ttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatc 181  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  28330955 ttgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcccttatcaactattggtgcattcttctttatc 28330856  T
Q  182 ataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg--nnnnnnngtaattaatattgtattgaaaagtg 279  Q
    |||||| ||||| ||| |||||||||||| |||||||||||||||||||||||| |||||||||||         |||||||||||||||||||||||||    
T  28330855 ataaatgcaaagcagattatattgaattgggagtggtgaaagtaatattaattagtgttataattgaaaaaaaaagtaattaatattgtattgaaaagtg 28330756  T
Q  280 aaatgggtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagta 342  Q
    |||||||||||||      ||||| ||||||| || |||||| |||||||||||||||| ||| |||||    
T  28330755 aaatgggtcaatttttatgggacagtatttttttgcaaatgggtcagttattatgggacggagggagta 28330687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 90 - 292
Target Start/End: Complemental strand, 38320065 - 38319862
Alignment:
Q  90 atttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataaatt 188  Q
    |||||||| |||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||     
T  38320065 atttcacatttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcccttatcaactattggtgcattcttctttatcataaatg 38319966  T
Q  189 caaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtc 288  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||       |||||||||||||||||||||||||||||| |||    
T  38319965 caaagtagaatatattgaattgagagtgatgaaagtagtattaattagtgttataattggaaaaaagtaattaatattgtattgaaaagtgaaatgagtc 38319866  T
Q  289 aatt 292  Q
    ||||    
T  38319865 aatt 38319862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 82 - 328
Target Start/End: Complemental strand, 42132977 - 42132722
Alignment:
Q  82 cttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgc--ccttatcaactattggtgcattct-cttt 178  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||  |||||| |||||||| |||||||| ||||    
T  42132977 cttgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcgcccttataaactattgatgcattcttcttt 42132878  T
Q  179 atcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagt 278  Q
    ||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||       ||||||||||||||||||||| ||    
T  42132877 atcataaatgcaaagtagaatatattgaattggaagtggtgaaagtaatattaattagtgttataattggaaaaaagtaattaatattgtattgaaatgt 42132778  T
Q  279 gaaatgggtcaatt------ggacaatatttttgtgaaaatggctcagttattatg 328  Q
    ||||   |||||||      |||||||| |||| || ||||| |||||||||||||    
T  42132777 gaaacaagtcaattttttcgggacaataattttttgcaaatgactcagttattatg 42132722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 82 - 344
Target Start/End: Original strand, 20964233 - 20964508
Alignment:
Q  82 cttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttat 180  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||| | ||| | ||||||||||||||||||||| |||||||    
T  20964233 cttgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgagtttgcgtgtctttatcaactattggtgcattcttctttat 20964332  T
Q  181 cataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt------gnnnnnnngtaattaatattgtattgaa 274  Q
    | ||||| ||||||||||||||| ||||||  ||||||||||||| ||||||||| | ||||||||      |       ||||||||||||||||||||    
T  20964333 cgtaaatgcaaagtagaatatatcgaattggaagtggtgaaagtagtattaattagtcttataattgaagaagaaaaaaagtaattaatattgtattgaa 20964432  T
Q  275 aagtgaaatgggtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagtata 344  Q
    ||||||||| ||||||||      ||||||||||||| || ||||| ||||||||||||||||| ||| |||||||    
T  20964433 aagtgaaataggtcaatttttctgggacaatatttttttgcaaatgactcagttattatgggacggagggagtata 20964508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 129 - 340
Target Start/End: Original strand, 36047092 - 36047312
Alignment:
Q  129 agagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaat 227  Q
    ||||||||||||||  |||||| ||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  36047092 agagaaaaatgggtatgagtgctcttatcaactattagtgcattcttctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagtaat 36047191  T
Q  228 attaattaatgttataatt-gnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaatt------ggacaatattttt-gtgaaaatggctca 319  Q
    |||||||||||||||| || |       |||||||||||||||||||||||||||||| |||||||       ||||||||||||  || ||||| ||||    
T  36047192 attaattaatgttatagttggaaaaaaagtaattaatattgtattgaaaagtgaaatgagtcaatttttctgagacaatatttttcttgcaaatgactca 36047291  T
Q  320 gttattatgggactgagagag 340  Q
    ||||||||||||| |||||||    
T  36047292 gttattatgggacggagagag 36047312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 87 - 292
Target Start/End: Original strand, 37315872 - 37316078
Alignment:
Q  87 ctcatttcacacttattaagaaaag-gtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcata 184  Q
    ||||||| ||||||||||||||||  ||| || |||||||||||||||||||||| || |  ||||||||| ||||||| ||||||| | ||||||||||    
T  37315872 ctcatttaacacttattaagaaaaaagtg-ataagtgaaagagagagaaaaatggttttggatgcccttattaactattagtgcatttttctttatcata 37315970  T
Q  185 aattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    ||| ||||||||||||| |||||||| |||||||||||||| ||||||||| |||||||||||       ||||||||||||||||||||||||||||||    
T  37315971 aatgcaaagtagaatatgttgaattgggagtggtgaaagtagtattaattagtgttataattggaaaaatgtaattaatattgtattgaaaagtgaaatg 37316070  T
Q  285 ggtcaatt 292  Q
    | ||||||    
T  37316071 gatcaatt 37316078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 86 - 332
Target Start/End: Complemental strand, 8759937 - 8759685
Alignment:
Q  86 actcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcata 184  Q
    |||||||||| ||||||||| |||| |||||| | |||||||||||||||||||||||  ||| | |||||||||||||| |||||| | ||||||||||    
T  8759937 actcatttcaaacttattaaaaaaaagtgtataaatgaaagagagagaaaaatgggtttcagttcacttatcaactattgatgcatttttctttatcata 8759838  T
Q  185 aattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    ||| |||||||||||||||||||||| |||| |||||| || ||||||||| |||||||| ||       |||||||||||| |||||| ||||||||||    
T  8759837 aatgcaaagtagaatatattgaattgggagttgtgaaattattattaattagtgttataagtggaaaaaagtaattaatatt-tattgataagtgaaatg 8759739  T
Q  285 ggtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggac 332  Q
    | ||||||      ||||| ||||||| || |||||||||  ||||||||||||    
T  8759738 gatcaatttttctgggacagtatttttttgcaaatggctccattattatgggac 8759685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 83 - 284
Target Start/End: Original strand, 32949794 - 32949999
Alignment:
Q  83 ttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggtta-gagtgcccttatcaactattggtgcattct-ctttat 180  Q
    ||||||||||||||||||||||| |||| |||||| | ||||| ||| |||||||||| ||  ||||| | |||||||||||||||||||| | ||||||    
T  32949794 ttgactcatttcacacttattaaaaaaaagtgtataaatgaaatagatagaaaaatggtttttgagtgtctttatcaactattggtgcatttttctttat 32949893  T
Q  181 cataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg--nnnnnnngtaattaatattgtattgaaaagt 278  Q
    |||||||  |||||||||||||||||||||||||| |||||| |||||||||||| ||| |||||||         ||||||||||||||||| ||||||    
T  32949894 cataaatgtaaagtagaatatattgaattgagagtagtgaaaataatattaattagtgtaataattggaaaaaaaagtaattaatattgtattaaaaagt 32949993  T
Q  279 gaaatg 284  Q
    ||||||    
T  32949994 gaaatg 32949999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 88 - 225
Target Start/End: Complemental strand, 53848802 - 53848664
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcatt-ctctttatcataaa 186  Q
    |||||||||  |||||||||||| |||||| |||| |||||||| |||||||  || ||||||||||||||||||||||||||||  | |||||||||||    
T  53848802 tcatttcacgtttattaagaaaaagtgtataagtgtaagagagaaaaaaatgattttgagtgcccttatcaactattggtgcattattatttatcataaa 53848703  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagta 225  Q
    | |||||||||||||||||||||||||||| ||||||||    
T  53848702 tgcaaagtagaatatattgaattgagagtgatgaaagta 53848664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 87 - 278
Target Start/End: Original strand, 22872337 - 22872530
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgccc--ttatcaactattggtgcattctct-ttatcat 183  Q
    |||||||||||| |||||||||||  ||||| ||||||  |||||||||||||| ||  ||||| |  || |||| |||||||||||||||  |||||||    
T  22872337 ctcatttcacacatattaagaaaaa-tgtataagtgaagaagagagaaaaatggttttaagtgctcgtttgtcaagtattggtgcattctccattatcat 22872435  T
Q  184 aaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagt 278  Q
    |||| |||||| ||||||||||||||||||||| ||||||||||||||||||  ||||||||||       ||||||||||||| ||||||||||    
T  22872436 aaatgcaaagtggaatatattgaattgagagtgatgaaagtaatattaattagagttataattggaaaaaagtaattaatattgcattgaaaagt 22872530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 85 - 292
Target Start/End: Original strand, 22020460 - 22020667
Alignment:
Q  85 gactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctttatcata 184  Q
    |||||||||||||||||||||||||| |||||| | ||| || ||||||||| ||| || |||| || || ||||||||| || |||| |  ||||||||    
T  22020460 gactcatttcacacttattaagaaaaagtgtataaatgagagtgagagaaaa-tggttttgagttcctttgtcaactatttgtacatttttcttatcata 22020558  T
Q  185 aattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt-gnnnnnnngtaattaatattgtattgaaaagtgaaat 283  Q
    ||| ||||||||||||||||||||||||| ||||||||||| || ||||||  ||||||||| |        ||||||||||||||||||||||| ||||    
T  22020559 aatgcaaagtagaatatattgaattgagaatggtgaaagtagtaataattagagttataattggaaaaaaaataattaatattgtattgaaaagtaaaat 22020658  T
Q  284 gggtcaatt 292  Q
     | ||||||    
T  22020659 tgatcaatt 22020667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 174 - 339
Target Start/End: Complemental strand, 54217411 - 54217240
Alignment:
Q  174 tctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattga 273  Q
    |||||||||||| | ||||||| |||||||||||||| |||||||||||||  |||||||||||||||||||||       |||||||||||||||||||    
T  54217411 tctttatcataactgcaaagtataatatattgaattgggagtggtgaaagtggtattaattaatgttataattggaaaaaagtaattaatattgtattga 54217312  T
Q  274 aaagtgaaatgggtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggactgagaga 339  Q
    ||| ||||||| |||||||      | ||||||||||| || ||||| ||||| ||||||||||| ||||||    
T  54217311 aaaatgaaatgagtcaatttttctagaacaatatttttttgtaaatgactcagctattatgggacggagaga 54217240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 88 - 342
Target Start/End: Original strand, 4360360 - 4360619
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataaa 186  Q
    ||||||||||| |||||||||||   |||| | |||| || |||||||||||| ||  |||||  || | || |||||||||||||||   || ||||||    
T  4360360 tcatttcacacatattaagaaaaaa-gtataaatgaatgaaagagaaaaatggttttaagtgcttttgttaagtattggtgcattctccactagcataaa 4360458  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatggg 286  Q
    | |||||| ||||||||||||||| || || |||||||| |||||||||  |||||| |||       ||||||||| ||||||||||||||||||| ||    
T  4360459 tgcaaagtggaatatattgaattgtgaatgatgaaagtagtattaattagagttatatttggaaaaaagtaattaatgttgtattgaaaagtgaaattgg 4360558  T
Q  287 tcaatt-----ggacaatatttttgtgaaaatggctcagttattatgggactgagagagta 342  Q
    ||||||      |||||||||||| || ||||||||||||||||||||||| ||| |||||    
T  4360559 tcaattttttgtgacaatatttttttgtaaatggctcagttattatgggacggagggagta 4360619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 87 - 244
Target Start/End: Original strand, 39052852 - 39053009
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataa 185  Q
    ||||||||||||  ||||||||||  ||||| | ||||||||| | ||||| |  || ||||| | ||||||| |||||||||||||| |||||||||||    
T  39052852 ctcatttcacacagattaagaaaaa-tgtataaatgaaagagaaaaaaaaaagaatttgagtgtctttatcaagtattggtgcattcttctttatcataa 39052950  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    ||  |||||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  39052951 atgtaaagtagaatatattgaattgagagtggtgaaagtagtattaattagagttataa 39053009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 88 - 285
Target Start/End: Complemental strand, 49448994 - 49448797
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaa 186  Q
    ||||||||||  |||||||||||  ||||| |||||| ||||||||||||||| ||  ||||| ||| |||| |||| ||||||||||| ||||||||||    
T  49448994 tcatttcaca--tattaagaaaaa-tgtataagtgaaggagagagaaaaatggttttaagtgctcttgtcaagtatttgtgcattctctattatcataaa 49448898  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt--gnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    | ||||||| ||||||||||||||||| || |||||||| |||||||||  |||||||||          |||||||||||| |||||||||||||||||    
T  49448897 tgcaaagtataatatattgaattgagaatgatgaaagtagtattaattagagttataattaaaaaaaaaagtaattaatattatattgaaaagtgaaatg 49448798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 174 - 290
Target Start/End: Original strand, 29550765 - 29550881
Alignment:
Q  174 tctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattga 273  Q
    ||||||||||||||  ||||||||||||||||||||| |||| ||||||||| |||||||||  ||||||||||       ||||||||| |||||||||    
T  29550765 tctttatcataaatgtaaagtagaatatattgaattgggagttgtgaaagtagtattaattagagttataattgaaaaaaggtaattaatgttgtattga 29550864  T
Q  274 aaagtgaaatgggtcaa 290  Q
    |||||||||||||||||    
T  29550865 aaagtgaaatgggtcaa 29550881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 101 - 287
Target Start/End: Original strand, 42051621 - 42051807
Alignment:
Q  101 attaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaat 199  Q
    ||||||||||| ||||| | ||||||||| |||||||||| ||  |||| | ||| ||| |||||||||||||| |||||||||||||  ||||||||||    
T  42051621 attaagaaaag-tgtataaatgaaagagatagaaaaatggtttttagtgtctttagcaagtattggtgcattcttctttatcataaatgtaaagtagaat 42051719  T
Q  200 atattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggt 287  Q
    ||| |||||||  |||||||||| ||||| ||||||   |||||||||       |||||||||||||||||||||| | ||||||||    
T  42051720 ataatgaattggaagtggtgaaaataataataattagaattataattgaaaaaaagtaattaatattgtattgaaaattaaaatgggt 42051807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 91 - 343
Target Start/End: Complemental strand, 41436633 - 41436375
Alignment:
Q  91 tttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataaattc 189  Q
    |||||||| |||||||||||| ||||| ||||| ||||||| |||||||| ||  |||||  || | |  |||||||||||||||   |||||||||| |    
T  41436633 tttcacacatattaagaaaag-tgtataagtgagagagagaaaaaaatggttttaagtgcttttgttatgtattggtgcattctccactatcataaatgc 41436535  T
Q  190 aaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtca 289  Q
    |||||||||||| |||||||| || || |||||||| |||||||||  |||||||||         |||||||||||||||||||||||||||| ||||     
T  41436534 aaagtagaatattttgaattgcgaatgatgaaagtagtattaattagagttataattagaaaaaaataattaatattgtattgaaaagtgaaattggtcg 41436435  T
Q  290 att------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagtat 343  Q
     ||      ||||||||||||| |  |||  |||||||||||||||||| ||| ||||||    
T  41436434 gttattttaggacaatatttttctacaaaaagctcagttattatgggacggagggagtat 41436375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 284
Target Start/End: Original strand, 55360367 - 55360498
Alignment:
Q  156 tcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg--nnnnn 252  Q
    |||| |||||| ||||||| |||||||||||||  |||||| |||||||||||||||||||| ||||||||||||||||||  ||||||||||           
T  55360367 tcaagtattggcgcattcttctttatcataaatgtaaagtacaatatattgaattgagagtgatgaaagtaatattaattagagttataattgaaaaaaa 55360466  T
Q  253 nngtaattaatattgtattgaaaagtgaaatg 284  Q
      ||||||||||||||||||||||||||||||    
T  55360467 aagtaattaatattgtattgaaaagtgaaatg 55360498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 161 - 290
Target Start/End: Original strand, 10099749 - 10099879
Alignment:
Q  161 tattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaat 259  Q
    |||||||||||| | |||||||||||||| ||||||||||||||||||||| |||| ||||||||| |||||||||  ||||||||||       || ||    
T  10099749 tattggtgcatttttctttatcataaatttaaagtagaatatattgaattgggagttgtgaaagtagtattaattagagttataattgaaaaaaagttat 10099848  T
Q  260 taatattgtattgaaaagtgaaatgggtcaa 290  Q
    |||| || ||||||||||| |||||||||||    
T  10099849 taatgttatattgaaaagtaaaatgggtcaa 10099879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 284
Target Start/End: Original strand, 34790903 - 34791100
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaa 186  Q
    ||||| ||||| |||||||||||| ||||| | |||||| ||||||||||||  || ||||||  ||||||| |||| ||||||||| ||||||||||||    
T  34790903 tcattgcacacatattaagaaaag-tgtataaatgaaagtgagagaaaaatgattttgagtgcttttatcaagtatttgtgcattcttctttatcataaa 34791001  T
Q  187 t-tcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
      | ||||||||||||||||||||||||||| | || ||| |||||||||  |||||||  |       ||||||||||||||||| |||||| |||||    
T  34791002 agtaaaagtagaatatattgaattgagagtgataaatgtagtattaattagagttataaaggaaaaaaagtaattaatattgtattaaaaagtaaaatg 34791100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 343
Target Start/End: Complemental strand, 46958875 - 46958615
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaa 186  Q
    ||||||||||| ||||||||||| |||||| ||||||||| ||||||| |  | || ||||| | || | || ||| |||||||||  | ||||||||||    
T  46958875 tcatttcacacatattaagaaaaagtgtataagtgaaagatagagaaata--gttttgagtgtc-ttgttaagtatcggtgcattccttcttatcataaa 46958779  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatggg 286  Q
      |||||||||||||||||||||||||||| | |||||| ||||||||    |||||||||       ||||||| | |||||  |||||||||||||||    
T  46958778 cgcaaagtagaatatattgaattgagagtgattaaagtagtattaatttgaattataattggaaaaaagtaattattgttgtaccgaaaagtgaaatggg 46958679  T
Q  287 tcaatt-------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagtat 343  Q
    ||||||       || |||||||||| || |||||||| |||||||||||||| ||| ||||||    
T  46958678 tcaattttttttggggcaatatttttatgcaaatggcttagttattatgggacggagggagtat 46958615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 235
Target Start/End: Original strand, 48400582 - 48400730
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataa 185  Q
    ||||||||||||  ||||||||||  ||||| | |||||||||||||||||||  ||  | |||  ||||||| ||||| || ||||| |||||||||||    
T  48400582 ctcatttcacacagattaagaaaaa-tgtataaatgaaagagagagaaaaatgatttttaatgcttttatcaagtattgatgtattcttctttatcataa 48400680  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    ||  |||||||||||||||||||||||||| |||||||| ||||||||||    
T  48400681 atgtaaagtagaatatattgaattgagagttgtgaaagtgatattaatta 48400730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 123 - 290
Target Start/End: Complemental strand, 44633277 - 44633109
Alignment:
Q  123 aaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaa 221  Q
    ||||| |||||||||| | || ||||| | || |||| |||||||||||||| |||||| ||||||  ||||||||| |||||||||||| |||||||||    
T  44633277 aaagaaagagaaaaatagttttgagtgtctttgtcaagtattggtgcattcttctttatgataaatgtaaagtagaa-atattgaattgaaagtggtgaa 44633179  T
Q  222 agtaatattaattaatgttataatt-gnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaa 290  Q
    |||| |||||||||  ||||||||| |       ||||||||| |||||||||||||||||||| |||||    
T  44633178 agtagtattaattagagttataattggaaaaaaagtaattaatgttgtattgaaaagtgaaatgagtcaa 44633109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 83 - 174
Target Start/End: Complemental strand, 54217532 - 54217439
Alignment:
Q  83 ttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagaga--aaaatgggttagagtgcccttatcaactattggtgcattct 174  Q
    ||||||||||||| |||||||||||||| |||||| |||||||||||||||  |||||||||| |||| ||||| ||||||||||||| |||||    
T  54217532 ttgactcatttcatacttattaagaaaaagtgtataagtgaaagagagagaaaaaaatgggtttgagtacccttgtcaactattggtgtattct 54217439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 292
Target Start/End: Original strand, 5499384 - 5499586
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaa 186  Q
    |||||| |||| ||||||||||| |||||| ||||||||||| |||||||| | || |||||    | |||| ||||| |||||||  | |||||||| |    
T  5499384 tcatttgacacatattaagaaaaagtgtataagtgaaagagaaagaaaaatagttttgagtg----tgtcaaatattgatgcattccttcttatcataga 5499479  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg-nnnnnnngtaattaatattgtattgaaaagtgaaatgg 285  Q
    | |||| ||||||||||||||||  ||||| ||||||||||||||||||  || |||||||        ||||||| |||||||||||||||||||||      
T  5499480 tgcaaaatagaatatattgaattaggagtgatgaaagtaatattaattagagtcataattgaaaaaaaagtaattattattgtattgaaaagtgaaattc 5499579  T
Q  286 gtcaatt 292  Q
    |||||||    
T  5499580 gtcaatt 5499586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 244
Target Start/End: Original strand, 35998133 - 35998225
Alignment:
Q  153 ttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    ||||||| ||||||| |||||| |||||||||||||  |||||| ||||||||||||||||||||||||||||| |||||||||  |||||||    
T  35998133 ttatcaagtattggtacattcttctttatcataaatgtaaagtaaaatatattgaattgagagtggtgaaagtagtattaattagagttataa 35998225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 292
Target Start/End: Complemental strand, 17237108 - 17236994
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    |||||||||| |||||| |||||||||||||||| || | |||||||| |||||||||  ||||||||||        ||||||||||| ||||||||||    
T  17237108 tatcataaatgcaaagtggaatatattgaattgaaagcgatgaaagtagtattaattagagttataattgaaaaaaattaattaatattatattgaaaag 17237009  T
Q  278 tgaaatgggtcaatt 292  Q
    |||||| ||||||||    
T  17237008 tgaaattggtcaatt 17236994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 174 - 246
Target Start/End: Original strand, 11583909 - 11583981
Alignment:
Q  174 tctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    ||||||| ||||||  |||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  11583909 tctttattataaatgtaaagtaaaatatattaaattgagagtgatgaaagtaatattaattaatgttataatt 11583981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 88 - 292
Target Start/End: Complemental strand, 13530017 - 13529813
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaa 186  Q
    ||||||||||| |||||||||||  ||||  || ||||||||||||||||||| || |||||  ||| | ||||||||||||||| | | |||| |||||    
T  13530017 tcatttcacacatattaagaaaaaatgtacaagcgaaagagagagaaaaatggttttgagtg-tcttgtgaactattggtgcattttcccttatgataaa 13529919  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatggg 286  Q
    |  ||||||||| |||| |||||  ||||| ||||| || || |||||||  ||||||||        |||||||||| ||||||||||||||||||  |    
T  13529918 tgtaaagtagaacatatcgaattaggagtgatgaaaatagtactaattaaaattataattagtaaaaagtaattaataatgtattgaaaagtgaaataag 13529819  T
Q  287 tcaatt 292  Q
    ||||||    
T  13529818 tcaatt 13529813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 126 - 283
Target Start/End: Original strand, 38160141 - 38160301
Alignment:
Q  126 gagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagt 224  Q
    ||||||||||||| | ||  |||| | || |||| ||||| |||||||||  ||||||||||| ||||||  |||||||||||||||||||| | |||||    
T  38160141 gagagagaaaaattgttttaagtgtctttgtcaaatattgatgcattctccattatcataaatacaaagtgaaatatattgaattgagagtgataaaagt 38160240  T
Q  225 aatattaattaatgttataattg--nnnnnnngtaattaatattgtattgaaaagtgaaat 283  Q
    |||||||||||  ||||||||||          ||||||||||||||||||||||||||||    
T  38160241 aatattaattagagttataattgaaaaaaaaaataattaatattgtattgaaaagtgaaat 38160301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 284
Target Start/End: Complemental strand, 3686094 - 3685970
Alignment:
Q  161 tattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaat 259  Q
    |||||||||||||||   ||| |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||  |||||||  |        ||||    
T  3686094 tattggtgcattctccactattataaatgcaaagttgaatatattgaattgagagtgatgaaagtaatattaattagagttataaaggggaaaaaataat 3685995  T
Q  260 taatattgtattgaaaagtgaaatg 284  Q
    ||||||||||||| |||||||||||    
T  3685994 taatattgtattggaaagtgaaatg 3685970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 273
Target Start/End: Complemental strand, 25149573 - 25149421
Alignment:
Q  123 aaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tcttt-atcataaattcaaagtagaatatattgaattgagagtggtga 220  Q
    |||||||||||||||| | || ||||||| || | || ||||||||||||| ||||| |||||||||  ||||| |||||||||||||||  ||| ||||    
T  25149573 aaagagagagaaaaatagttttgagtgccttttttaagtattggtgcattcctcttttatcataaatgtaaagtggaatatattgaattggaagttgtga 25149474  T
Q  221 aagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattga 273  Q
    ||||| |||||||||  ||||||||||       ||||||||| |||||||||    
T  25149473 aagtagtattaattagagttataattggaaaaaagtaattaatgttgtattga 25149421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 284
Target Start/End: Complemental strand, 29644438 - 29644314
Alignment:
Q  161 tattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaat 259  Q
    |||| |||||||||||  ||||||||||  |||||||||||||||||||||||| || |||||||| |||||||||  |||||||  |       || ||    
T  29644438 tattagtgcattctctactatcataaatgtaaagtagaatatattgaattgagaatgatgaaagtagtattaattatagttataaaaggaaaaaagttat 29644339  T
Q  260 taatattgtattgaaaagtgaaatg 284  Q
    |||||||||||||||||||||||||    
T  29644338 taatattgtattgaaaagtgaaatg 29644314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 3505832 - 3505718
Alignment:
Q  133 aaaaatgggttagagtgcccttatcaactattggtgcattctctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaa 232  Q
    |||||||| || ||||| | || | |||||||| |||||| | ||||||||||||  |||||||||||||||||||||||| | |||||||||  |||||    
T  3505832 aaaaatggctttgagtgtctttgttaactattgatgcattttttttatcataaatgtaaagtagaatatattgaattgagattagtgaaagtatgattaa 3505733  T
Q  233 ttaatgttataattg 247  Q
    |||  ||||||||||    
T  3505732 ttagagttataattg 3505718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 90 - 284
Target Start/End: Original strand, 18849713 - 18849907
Alignment:
Q  90 atttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataaatt 188  Q
    ||||||||| |||||||| ||  ||||| | |||| |||| ||||| |||| ||  ||||| ||| | || |||||||||||||||   ||||||||||     
T  18849713 atttcacacatattaagacaaa-tgtataaatgaaggagaaagaaatatggttttaagtgctcttgttaagtattggtgcattctccactatcataaatg 18849811  T
Q  189 caaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    ||||||  ||||||||||||||  ||| |||||||||||||||||||  |||||||  |       |||||||||||| |||||||||||||||||    
T  18849812 caaagtgaaatatattgaattggaagttgtgaaagtaatattaattagagttataaagggaaaaaagtaattaatattttattgaaaagtgaaatg 18849907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 22129136 - 22129227
Alignment:
Q  201 tattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    |||||||||| |||||||||||||| |||||||||  |||||||||        ||||||||||||||||||||||||||| ||||||||||    
T  22129136 tattgaattgtgagtggtgaaagtagtattaattagagttataattaagaaaaagtaattaatattgtattgaaaagtgaactgggtcaatt 22129227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 290
Target Start/End: Complemental strand, 28279920 - 28279790
Alignment:
Q  161 tattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaat 259  Q
    |||||||||||| | |||||||||||||  ||||||||||||||| |||||  ||  |||||| || |||||||||  ||||||||||       |||||    
T  28279920 tattggtgcatttttctttatcataaatataaagtagaatatatttaattggaagcagtgaaaatagtattaattagagttataattgaaaaaaagtaat 28279821  T
Q  260 taatattgtattgaaaagtgaaatgggtcaa 290  Q
    |||| |||||||||||||||||||| |||||    
T  28279820 taatgttgtattgaaaagtgaaatgagtcaa 28279790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 244
Target Start/End: Complemental strand, 37309781 - 37309697
Alignment:
Q  161 tattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    ||||| ||||||||||  |||||||||| ||||||  |||||||||||||||||||| ||||||||||||||||||  |||||||    
T  37309781 tattgatgcattctctactatcataaatgcaaagttaaatatattgaattgagagtgatgaaagtaatattaattagagttataa 37309697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 283
Target Start/End: Original strand, 41710186 - 41710291
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    |||||||||| |||||| ||||||||||||||| ||||| ||||||||||||||||||  |||||||  |       |||||||||  ||||||||||||    
T  41710186 tatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtaatattaattagagttataaagggaaaaaagtaattaatgatgtattgaaaag 41710285  T
Q  278 tgaaat 283  Q
    ||||||    
T  41710286 tgaaat 41710291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 190 - 283
Target Start/End: Original strand, 43335077 - 43335170
Alignment:
Q  190 aaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaat 283  Q
    ||||| |||||||||||||||||||||  ||||||| |||||||||  || |||||||       |||||||||||||||||||||||||||||    
T  43335077 aaagtggaatatattgaattgagagtgaagaaagtagtattaattatagtcataattgataaaaagtaattaatattgtattgaaaagtgaaat 43335170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 246
Target Start/End: Original strand, 47277632 - 47277792
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataa 185  Q
    |||||||||||| |||||||||||  ||||| ||| ||||| ||| ||||||   ||  | ||||||| |||  |||| || |||| | |||||||||||    
T  47277632 ctcatttcacacatattaagaaaaaatgtataagtaaaagatagataaaaatatttttcaatgcccttgtcaggtatttgtacatttttctttatcataa 47277731  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    ||  |||||| |||||||||||||||||||| | |||||| |||||||||  |||||||||    
T  47277732 atgtaaagtaaaatatattgaattgagagtgattaaagtagtattaattatagttataatt 47277792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 53848319 - 53848239
Alignment:
Q  256 taattaatattgtattgaaaagtgaaatgggtcaatt-----ggacaatatttttgtgaaaatggctcagttattatggga 331  Q
    |||||||||||||||||||||||||||||||||||||      |||||||||||| || ||||| ||||||||||||||||    
T  53848319 taattaatattgtattgaaaagtgaaatgggtcaattttctgagacaatatttttttgcaaatgactcagttattatggga 53848239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 174 - 290
Target Start/End: Complemental strand, 4354517 - 4354401
Alignment:
Q  174 tctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattga 273  Q
    ||||||||||||||  ||  ||||||||||| |||||||||| ||||||||| |||||||||  ||||||||||        |||||||| ||| |||||    
T  4354517 tctttatcataaatgtaatttagaatatattaaattgagagttgtgaaagtagtattaattatagttataattggagaaaaataattaatgttgcattga 4354418  T
Q  274 aaagtgaaatgggtcaa 290  Q
    |||||||||| ||||||    
T  4354417 aaagtgaaattggtcaa 4354401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 284
Target Start/End: Complemental strand, 41203889 - 41203695
Alignment:
Q  91 tttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattc 189  Q
    |||||||| |||||||||||  ||||| | |||| |||| |||||||||| ||  ||||| ||| | || ||||| |||||||| |  || ||||||| |    
T  41203889 tttcacacgtattaagaaaaa-tgtataaatgaaggagatagaaaaatggtttttagtgctcttgttaagtattgatgcattcttcactaccataaatac 41203791  T
Q  190 aaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttat-aattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    ||||| |||||||||||||||| |||| | |||||| |||||||||  ||||| || ||       ||||||||||||||||||| ||||||||||    
T  41203790 aaagtggaatatattgaattgaaagtgataaaagtagtattaattagagttataaaatgaaaaaaagtaattaatattgtattgataagtgaaatg 41203695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 88 - 202
Target Start/End: Original strand, 18872606 - 18872718
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgca-ttctctttatcataaa 186  Q
    ||||||||||| ||||||||||| |||||| |||||||||||| ||||||| | | || ||   |||||||| ||||| |||| ||||| ||||||||||    
T  18872606 tcatttcacacgtattaagaaaaagtgtataagtgaaagagagcgaaaaatagttgagtgt---cttatcaagtattgatgcatttctccttatcataaa 18872702  T
Q  187 ttcaaagtagaatata 202  Q
    | |||| |||||||||    
T  18872703 tgcaaaatagaatata 18872718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 161 - 245
Target Start/End: Complemental strand, 27977230 - 27977145
Alignment:
Q  161 tattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataat 245  Q
    |||||||||||||||   ||| |||||| |||||| ||||||||||||||||||||| ||||||| ||||||||||  ||||||||    
T  27977230 tattggtgcattctccactattataaatgcaaagtggaatatattgaattgagagtgatgaaagtgatattaattagagttataat 27977145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 90 - 283
Target Start/End: Complemental strand, 39979933 - 39979740
Alignment:
Q  90 atttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataaatt 188  Q
    ||||||||| |||||||||||  ||||| | ||||  ||| |||||||| | ||  ||||| ||| | || ||| |||||||||||   ||||||||||     
T  39979933 atttcacacgtattaagaaaaa-tgtataaatgaagtagaaagaaaaatagttttaagtgcacttgttaagtatcggtgcattctccactatcataaatg 39979835  T
Q  189 caaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaat 283  Q
     ||||| |||||||||||||||  | || ||||||||||||||||||  |||||||  |       |||||||||||||||||||||||||||||    
T  39979834 taaagtggaatatattgaattggaaatgatgaaagtaatattaattagagttataaaggggaaaaagtaattaatattgtattgaaaagtgaaat 39979740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 161 - 246
Target Start/End: Complemental strand, 47846981 - 47846896
Alignment:
Q  161 tattggtgcattctctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    |||| ||||||||||| |||||||||| ||||||  |||||||||||||  ||||| |||||||| |||||||||  |||||||||    
T  47846981 tatttgtgcattctctatatcataaatgcaaagtgaaatatattgaattaggagtgatgaaagtagtattaattagagttataatt 47846896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 284
Target Start/End: Original strand, 54729526 - 54729631
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    |||||||||| |||||| ||||||||||||||||| ||| |||||||| |||||||||  |||||||  |       |||||||||||||||||| ||||    
T  54729526 tatcataaatgcaaagtggaatatattgaattgag-gtgatgaaagtagtattaattagagttataaagggaaaaaagtaattaatattgtattggaaag 54729624  T
Q  278 tgaaatg 284  Q
    |||||||    
T  54729625 tgaaatg 54729631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 244
Target Start/End: Complemental strand, 49306710 - 49306586
Alignment:
Q  121 tgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtg 219  Q
    |||||||||||||||||||| ||  ||||| ||| | || |||||||  ||||||   |||||||||| |||||| ||||||||||||||  ||||| ||    
T  49306710 tgaaagagagagaaaaatggttttaagtgctcttgttaagtattggtctattctcccctatcataaatgcaaagtggaatatattgaattaggagtgatg 49306611  T
Q  220 aaagtaatattaattaatgttataa 244  Q
    |||||| |||||||||  |||||||    
T  49306610 aaagtagtattaattagagttataa 49306586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 87 - 284
Target Start/End: Complemental strand, 8295185 - 8294990
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataa 185  Q
    ||||||||||||  ||||||||||  ||||| | |||||||||||||||||| | ||  ||| | |||   || |||||||||||||||   ||||||||    
T  8295185 ctcatttcacacaaattaagaaaaa-tgtataaatgaaagagagagaaaaattgttttaagtcctcttgataagtattggtgcattctccactatcataa 8295087  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    || ||| ||| |||||||||||||| |||   |||||||| ||| |||||  |||||||  |       ||||||||||||||||||||||||||||||    
T  8295086 atgcaatgtataatatattgaattgggaga--tgaaagtagtataaattagagttataaagggaaaaaggtaattaatattgtattgaaaagtgaaatg 8294990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 26799258 - 26799324
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||||| |||| |||||||||||||||||||| || |||||||| |||||||||  |||||||    
T  26799258 tatcataaatgcaaaatagaatatattgaattgagaatgatgaaagtactattaattagagttataa 26799324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 284
Target Start/End: Complemental strand, 34021120 - 34020994
Alignment:
Q  161 tattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtgaaagta--atattaattaatgttataattgnnnnnnngta 257  Q
    ||||||||||||||||  |||||||||| ||||||  |||||||||||||||||||| |||| |||  ||||||||||  |||||||  |        ||    
T  34021120 tattggtgcattctctactatcataaatgcaaagtctaatatattgaattgagagtgatgaaggtaatatattaattagagttataaagggaaaaaaata 34021021  T
Q  258 attaatattgtattgaaaagtgaaatg 284  Q
    ||| |||||||||||||||||||||||    
T  34021020 atttatattgtattgaaaagtgaaatg 34020994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 42544274 - 42544208
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||||| |||||| ||||||||||||||| ||||| | ||||||||||||||||  |||||||    
T  42544274 tatcataaatgcaaagtggaatatattgaattgtgagtgataaaagtaatattaattagagttataa 42544208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 5291677 - 5291640
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    ||||||||||||||||||||||||||||||||||||||    
T  5291677 gtaattaatattgtattgaaaagtgaaatgggtcaatt 5291640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 28974389 - 28974316
Alignment:
Q  161 tattggtgcattctct-ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaat 233  Q
    |||||||||||||||  ||||||||||| |||||  |||||||||||| |||||||| |||||||| |||||||    
T  28974389 tattggtgcattctccattatcataaatgcaaaggggaatatattgaaatgagagtgatgaaagtagtattaat 28974316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 30568724 - 30568667
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    |||||||||| ||||||  |||||||||||||||||||| ||||| ||||||||||||    
T  30568724 tatcataaatgcaaagtgaaatatattgaattgagagtgatgaaaataatattaatta 30568667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 284
Target Start/End: Original strand, 42185838 - 42185944
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    |||||||||| ||| ||  |||||||||||||||||||| |||||||| |||||||||  ||||||| ||       |||||||||  ||||||||||||    
T  42185838 tatcataaatacaaggtgaaatatattgaattgagagtgatgaaagtagtattaattagagttataaatggaaaaaagtaattaatgatgtattgaaaag 42185937  T
Q  278 tgaaatg 284  Q
    | |||||    
T  42185938 taaaatg 42185944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 50714648 - 50714579
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    |||||||||||| ||||| |||||||||||||||||| || |||||||| ||| ||| | ||||||||||    
T  50714648 ttatcataaattgaaagtggaatatattgaattgagaatgatgaaagtagtataaatgagtgttataatt 50714579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 9052105 - 9052161
Alignment:
Q  191 aagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    ||||||||||||||||||| ||| || |||||||| ||||||||| |||||||||||    
T  9052105 aagtagaatatattgaattcagaatgatgaaagtagtattaattagtgttataattg 9052161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 87 - 210
Target Start/End: Original strand, 25902412 - 25902536
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataa 185  Q
    |||||||||||| ||||||||||| |||||| ||||||||||  || ||||||| || |||||   || | || |||| |||||||| ||||| | ||||    
T  25902412 ctcatttcacacatattaagaaaaagtgtataagtgaaagaggaagtaaaatggttttgagtgtttttgttaagtattagtgcattcttctttgttataa 25902511  T
Q  186 attcaaagtagaatatattgaattg 210  Q
    ||  ||||| |||||||||||||||    
T  25902512 atataaagttgaatatattgaattg 25902536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 190 - 283
Target Start/End: Complemental strand, 32323717 - 32323624
Alignment:
Q  190 aaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaat 283  Q
    |||||| |||||||||||||||||||| | ||| ||||||| ||| | |||||||||         ||||||||||||||||||||||||||||    
T  32323717 aaagtataatatattgaattgagagtgattaaaataatattcattgaagttataattaaaaaataataattaatattgtattgaaaagtgaaat 32323624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 33093497 - 33093545
Alignment:
Q  174 tctttatcataaattcaaagtagaatatattgaattgagagtggtgaaa 222  Q
    ||||||||||||||  ||||||| |||||||||||||||||||||||||    
T  33093497 tctttatcataaatgtaaagtaggatatattgaattgagagtggtgaaa 33093545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 37787030 - 37786958
Alignment:
Q  174 tctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    |||||| |||||||  ||| ||||||||||| |||||| |||||||||| |||||||||||||  ||||||||    
T  37787030 tctttaccataaatgtaaaatagaatatattaaattgaaagtggtgaaaataatattaattaaaattataatt 37786958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 39976438 - 39976498
Alignment:
Q  184 aaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||| |||||| ||||||||||||||||||||| |||||||| ||||||| | ||||||||    
T  39976438 aaatgcaaagtggaatatattgaattgagagtgatgaaagtagtattaatcagtgttataa 39976498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 247
Target Start/End: Original strand, 29990449 - 29990583
Alignment:
Q  113 tgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataaattcaaagtagaatatattgaattga 211  Q
    ||||| ||||||||||||| |||||| | || ||||| | || |||| ||||| |||||||| |  ||||||||||  ||||| ||||||||||||||||    
T  29990449 tgtataagtgaaagagagaaaaaaatagatttgagtgtc-ttgtcaagtattgatgcattctttcatatcataaatataaagttgaatatattgaattga 29990547  T
Q  212 gagtggtgaaagtaatattaattaatgttataattg 247  Q
     ||||   ||| || |||||||||| ||||||||||    
T  29990548 aagtgaaaaaaatagtattaattaaagttataattg 29990583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 223
Target Start/End: Complemental strand, 35029177 - 35029055
Alignment:
Q  101 attaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaat 199  Q
    ||||||||||| ||||| | ||||| |||||||||||| | || ||||| | || |||| |||| || |||||| |||||||||||||  ||||||||||    
T  35029177 attaagaaaag-tgtataaatgaaaaagagagaaaaatagtttcgagtgtctttgtcaagtattagtacattcttctttatcataaatgtaaagtagaat 35029079  T
Q  200 atattgaattgagagtggtgaaag 223  Q
    | ||| ||||  ||||||||||||    
T  35029078 aaattaaattaggagtggtgaaag 35029055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 284
Target Start/End: Complemental strand, 48740603 - 48740479
Alignment:
Q  161 tattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaat 259  Q
    |||||||||||||||   ||||||||||  ||||| |||||||||||||| | | || | ||||||||||||||||  |||||||  |       |||||    
T  48740603 tattggtgcattctccactatcataaatgtaaagtggaatatattgaattaaaaatgataaaagtaatattaattagagttataaagggaaaaaagtaat 48740504  T
Q  260 taatattgtattgaaaagtgaaatg 284  Q
    ||||||||| |||||||||||||||    
T  48740503 taatattgttttgaaaagtgaaatg 48740479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 290
Target Start/End: Complemental strand, 49401777 - 49401609
Alignment:
Q  123 aaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaa 221  Q
    |||||||||||||||| | || || || |||| |||| ||||| | |||| | |||||| ||||||  |||||||||||||||||||||  | |  ||||    
T  49401777 aaagagagagaaaaatagttttgaatgtccttttcaagtattgatacattgttctttattataaatgtaaagtagaatatattgaattggaaattatgaa 49401678  T
Q  222 agtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaa 290  Q
    |||  |||||||||  || |||||||       ||||||||| ||| |||||||||| |||||||||||    
T  49401677 agtggtattaattagagtcataattgaagaaaagtaattaatgttgcattgaaaagtaaaatgggtcaa 49401609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 25250634 - 25250704
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    ||||||||||| || ||||||||||||| |||| |||||| ||||| || |||||||||  ||||||||||    
T  25250634 ttatcataaatgcatagtagaatatattaaattaagagtgatgaaactagtattaattagagttataattg 25250704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 39258314 - 39258380
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    ||||||||||  ||| | ||||||||| ||||||||||| |||||||| |||||||||| |||||||    
T  39258314 tatcataaatgtaaaatggaatatattaaattgagagtgatgaaagtattattaattaaagttataa 39258380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 10309297 - 10309366
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    |||||||||| |||| || |||||||||||||||||    |||||||||||||||||||  |||||||||    
T  10309297 tatcataaatgcaaaataaaatatattgaattgagataaatgaaagtaatattaattaagattataattg 10309366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 175 - 285
Target Start/End: Original strand, 29136828 - 29136938
Alignment:
Q  175 ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaa 274  Q
    ||||||||||||| |||||| ||| ||||||||||  |||||   ||| || |||||||||  ||||||||||       ||||||||||||| ||||||    
T  29136828 ctttatcataaatgcaaagtggaagatattgaatttggagtgactaaaatattattaattagagttataattgaaaaaaagtaattaatattgcattgaa 29136927  T
Q  275 aagtgaaatgg 285  Q
    |||| ||||||    
T  29136928 aagtaaaatgg 29136938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 29815157 - 29815205
Alignment:
Q  196 gaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||||||||||  |||||||||||||||||||||||  |||||||    
T  29815157 gaatatattgaattggaagtggtgaaagtaatattaattagagttataa 29815205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 289
Target Start/End: Original strand, 40020897 - 40021102
Alignment:
Q  88 tcatttcacacttattaagaaaag-gtgta-tgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgca-ttctctttatcata 184  Q
    ||||||||||| |||||||||||  || || | |||||| ||||||||||||||| || || ||   || |||| |||||||||| ||  | ||||||||    
T  40020897 tcatttcacacatattaagaaaaatgtatactaagtgaatgagagagaaaaatggttttgaatgtttttgtcaagtattggtgcatttaccattatcata 40020996  T
Q  185 aattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg-nnnnnnngtaattaatattgtattgaaaagtgaaat 283  Q
     || ||||  |||||||||| ||||| ||||| ||| |||| |||||||||  ||||||||||        ||||||||||||| ||||| || ||||||    
T  40020997 gatgcaaaaaagaatatattaaattgggagtgatgacagtagtattaattagagttataattgaaaaaaaagtaattaatattgcattgagaactgaaat 40021096  T
Q  284 gggtca 289  Q
    ||||||    
T  40021097 gggtca 40021102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 42738452 - 42738488
Alignment:
Q  256 taattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    ||||||||||||||||||||||||||||| |||||||    
T  42738452 taattaatattgtattgaaaagtgaaatgagtcaatt 42738488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 52676982 - 52677125
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataa 185  Q
    ||||||||| | ||||||||||||  ||||| |||||| || |||||||||||  ||  ||||| |||   || ||||| ||||||  || |||||||||    
T  52676982 ctcatttcatatttattaagaaaaa-tgtattagtgaatgaaagagaaaaatgattttaagtgctcttgataagtattgatgcatttatcattatcataa 52677080  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatatt 230  Q
    ||  |||||| |||||||| ||||||||||| |||||||| ||||    
T  52677081 atgtaaagtaaaatatattaaattgagagtgatgaaagtactatt 52677125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 18509505 - 18509454
Alignment:
Q  184 aaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    |||| ||||||| |||||||||||||| ||||| |||||||| |||||||||    
T  18509505 aaatacaaagtataatatattgaattgggagtgatgaaagtattattaatta 18509454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 343
Target Start/End: Complemental strand, 33047486 - 33047392
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagtat 343  Q
    ||||||||||||||||||||||||||||||  ||| ||      ||||| | ||||| || |||||||||| |||||||||||| || |||||||    
T  33047486 gtaattaatattgtattgaaaagtgaaatgactcagttattttgggacactttttttttgcaaatggctcaattattatgggacggaaagagtat 33047392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 244
Target Start/End: Complemental strand, 38977148 - 38976990
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcatt-ctctt-tatcata 184  Q
    ||||||| |||| |||||||||||  ||||| | ||||  |||||||||||| | ||  ||||| ||| | || |||||||||||| |||   |||||||    
T  38977148 ctcattttacacgtattaagaaaaa-tgtataaatgaagaagagagaaaaatagttttaagtgcacttcttaagtattggtgcatttctcccctatcata 38977050  T
Q  185 aattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||  ||||| |||||||||||||||| | || |||||||| |||||||||  |||||||    
T  38977049 aatgtaaagtggaatatattgaattgaaaatgatgaaagtagtattaattagagttataa 38976990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 151
Target Start/End: Original strand, 41594799 - 41594862
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcc 151  Q
    ||||||||||  |||| |||||| |||| | |||||||||||||||||||||| || |||||||    
T  41594799 tcatttcacatatattgagaaaaagtgtttaagtgaaagagagagaaaaatggttttgagtgcc 41594862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 1796284 - 1796350
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||||| |||||| |||||||||||||||  ||| ||||||||| ||| |||||  |||||||    
T  1796284 tatcataaatgcaaagtggaatatattgaattggaagttgtgaaagtagtataaattagagttataa 1796350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 244
Target Start/End: Original strand, 42024247 - 42024309
Alignment:
Q  182 ataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||| |||||| |||||||||||||||  |||| |||||||| |||||||||  |||||||    
T  42024247 ataaatgcaaagtggaatatattgaattggaagtgatgaaagtagtattaattatagttataa 42024309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 283525 - 283574
Alignment:
Q  184 aaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaat 233  Q
    ||||||||||| |||||||| |||||| ||||| |||||||| |||||||    
T  283525 aaattcaaagtggaatatatagaattgggagtgatgaaagtagtattaat 283574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 388539 - 388576
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    |||||||||||||||||||||||||||||  |||||||    
T  388539 gtaattaatattgtattgaaaagtgaaataagtcaatt 388576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 25902596 - 25902633
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    |||||||||||||||||  |||||||||||||||||||    
T  25902596 gtaattaatattgtattcgaaagtgaaatgggtcaatt 25902633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 44022000 - 44022037
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  44022000 gtaattaatattgtattgaaaattgaaatggatcaatt 44022037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 284
Target Start/End: Complemental strand, 47386147 - 47386118
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatg 284  Q
    ||||||||||||||||||||||||||||||    
T  47386147 gtaattaatattgtattgaaaagtgaaatg 47386118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 284
Target Start/End: Original strand, 48400749 - 48400778
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatg 284  Q
    ||||||||||||||||||||||||||||||    
T  48400749 gtaattaatattgtattgaaaagtgaaatg 48400778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 1825292 - 1825356
Alignment:
Q  180 tcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    ||||||||  ||||| |||||||||||||||| | || ||||| ||||||||||||  |||||||    
T  1825292 tcataaatgtaaagtggaatatattgaattgaaaatgatgaaaataatattaattagagttataa 1825356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 4727503 - 4727467
Alignment:
Q  256 taattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  4727503 taattaatattgcattgaaaagtgaaatggatcaatt 4727467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 283
Target Start/End: Original strand, 18873071 - 18873099
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaat 283  Q
    |||||||||||||||||||||||||||||    
T  18873071 gtaattaatattgtattgaaaagtgaaat 18873099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 38614987 - 38615055
Alignment:
Q  161 tattggtgcattctct-ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaata 228  Q
    |||||||||||| | | ||||||||||| |||| || |||||||||||||| ||||| | |||||||||    
T  38614987 tattggtgcattttttcttatcataaatgcaaaataaaatatattgaattgggagtgattaaagtaata 38615055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 285
Target Start/End: Complemental strand, 40293539 - 40293511
Alignment:
Q  257 aattaatattgtattgaaaagtgaaatgg 285  Q
    |||||||||||||||||||||||||||||    
T  40293539 aattaatattgtattgaaaagtgaaatgg 40293511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 284
Target Start/End: Complemental strand, 49812216 - 49812188
Alignment:
Q  256 taattaatattgtattgaaaagtgaaatg 284  Q
    |||||||||||||||||||||||||||||    
T  49812216 taattaatattgtattgaaaagtgaaatg 49812188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 173; Significance: 6e-93; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 80 - 342
Target Start/End: Original strand, 46194150 - 46194418
Alignment:
Q  80 cccttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctcttta 179  Q
    ||||||||| ||||||||||||||||||||| |||||| ||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  46194150 cccttgactaatttcacacttattaagaaaaagtgtataagttaaagagagagaaaaatgggtttgagtgcccttatcaactgttggtgcattctcttta 46194249  T
Q  180 tcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtg 279  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||       |||||||||||||||||||||||||    
T  46194250 tcataaatgcaaagtagaatatattgaattgagagtggtgaaagtagtattaattagtgttataattggaaaaaagtaattaatattgtattgaaaagtg 46194349  T
Q  280 aaatgggtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagta 342  Q
    |||||||||||||      ||||||||||||| |||||||||||||||| ||||||||| ||| |||||    
T  46194350 aaatgggtcaatttttctgggacaatatttttctgaaaatggctcagttgttatgggacggagggagta 46194418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 87 - 342
Target Start/End: Complemental strand, 1923242 - 1922990
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataa 185  Q
    |||||||||||||||||||||||| |||||| ||||||| |||||  ||||||| ||   ||||||||||||||| |||||||||||| |||||||||||    
T  1923242 ctcatttcacacttattaagaaaaagtgtataagtgaaaaagaga--aaaatggttt---gtgcccttatcaactgttggtgcattcttctttatcataa 1923148  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgg 285  Q
    || |||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||       ||||||||||||||     ||||||||||||    
T  1923147 atgcaaagtagaatatattgaattgggagtggtgaaagtagtattaattagtgttataattggaaaaaagtaattaatattgt-----aaagtgaaatgg 1923053  T
Q  286 gtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagta 342  Q
     ||||||      ||||||||||| | || ||||||||||||||||||||||| ||| |||||    
T  1923052 atcaatttttctgggacaatatttctttgcaaatggctcagttattatgggacggagggagta 1922990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 88 - 343
Target Start/End: Original strand, 30261455 - 30261715
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaa 186  Q
    ||||||||| | ||||||||||  |||||  |||||||||||||||||||| | || || || | || |||| |||||||||||||  | ||||||||||    
T  30261455 tcatttcacgcatattaagaaagagtgta--agtgaaagagagagaaaaatagttttgactggc-ttgtcaagtattggtgcattccttcttatcataaa 30261551  T
Q  187 ttcaaagtagaatatattgaa-ttgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgg 285  Q
    |  ||||| |||||||||||| ||| ||||| |||||||| |||||||||  |||||||||        ||||||| |||||||||||||||||||||||    
T  30261552 tgtaaagtggaatatattgaatttgggagtgatgaaagtagtattaattagagttataattaggaaaaagtaattattattgtattgaaaagtgaaatgg 30261651  T
Q  286 gtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagtat 343  Q
    |||||||      ||||||||||||| || ||||||||||||||||||||||| ||| ||||||    
T  30261652 gtcaatttttttgggacaatatttttttgcaaatggctcagttattatgggacagagggagtat 30261715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 91 - 343
Target Start/End: Complemental strand, 9218297 - 9218039
Alignment:
Q  91 tttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaattc 189  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||| | || ||||| | |  | || |||||||||||||| | ||||||||||| |    
T  9218297 tttcacacatattaagaaaaagtgtataagtgaaagagagagaaaaatagttttgagtgtc-tcgttaagtattggtgcattctttcttatcataaatgc 9218199  T
Q  190 aaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggt-- 287  Q
    ||||||||||||| ||||||||||||| |||||||| |||||||||  ||||||| ||       |||| ||   |||| ||||||||||||||||||      
T  9218198 aaagtagaatataatgaattgagagtgatgaaagtagtattaattagagttataaatggaaaaaagtaagtatctttgtgttgaaaagtgaaatgggtaa 9218099  T
Q  288 ----caattggacaatatttttgtgaaaatggctcagttattatgggactgagagagtat 343  Q
         ||||||||||||||||| || ||||| ||||||||||| ||||| ||| ||||||    
T  9218098 aaaaaaattggacaatatttttttgcaaatgactcagttattacgggacggagggagtat 9218039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 91 - 342
Target Start/End: Original strand, 39329705 - 39329962
Alignment:
Q  91 tttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaattc 189  Q
    |||||||| |||||||||||  ||||| ||||||||||| ||| |||| | || || || | || | || |||||||||||||| | ||||||||||| |    
T  39329705 tttcacacatattaagaaaaaatgtataagtgaaagagaaagataaatagttttgaatgtc-ttgttaagtattggtgcattctttcttatcataaatgc 39329803  T
Q  190 aaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtca 289  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||   |||||||||       ||||||| | |||||||||||||||||||| ||||    
T  39329804 aaagtagaatatattgaattgagagtgatgaaagtagtattaattagaattataattggaaaaaagtaattattgttgtattgaaaagtgaaatgagtca 39329903  T
Q  290 a------ttggacaatatttttgtgaaaatggctcagttattatgggactgagagagta 342  Q
    |      | ||||||||||||| || ||||| |||| |||||||||||| ||| |||||    
T  39329904 acttttttaggacaatatttttttgcaaatgactcatttattatgggacggagggagta 39329962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 91 - 332
Target Start/End: Complemental strand, 48409738 - 48409489
Alignment:
Q  91 tttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaa--tgggttagagtgcccttatcaactattggtgcattct-ctttatcataaat 187  Q
    |||||||| |||||||||||  ||||| | ||||||||||||| |||  | | || ||||| | || |||| |||||||| ||||| |||||||||||||    
T  48409738 tttcacacatattaagaaaaa-tgtataaatgaaagagagagagaaagattgttttgagtgtctttgtcaagtattggtggattcttctttatcataaat 48409640  T
Q  188 tcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggt 287  Q
      |||||||||||| |||||||| |||||||||||||| |||||||||  ||||||||||       ||||||||| |||||||||||| ||||||||||    
T  48409639 gtaaagtagaatatgttgaattgggagtggtgaaagtagtattaattagagttataattggaaaaaagtaattaatgttgtattgaaaactgaaatgggt 48409540  T
Q  288 caa------ttggacaatatttttgtgaaaatggctcagttattatgggac 332  Q
    |||      | ||||||||||||| |  ||||||||||||||||| |||||    
T  48409539 caagattcctaggacaatatttttttacaaatggctcagttattacgggac 48409489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 87 - 244
Target Start/End: Original strand, 1334732 - 1334889
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataa 185  Q
    ||||||||||||  |||||||||||  |||| | ||||||||||||||||||   || || |||| ||||||| |||||||||||||| |||||||||||    
T  1334732 ctcatttcacacagattaagaaaagc-gtataaatgaaagagagagaaaaataattttgaatgcctttatcaagtattggtgcattcttctttatcataa 1334830  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    ||  ||||||||||||||||||||| |||||||||||||| |||||||||  |||||||    
T  1334831 atgtaaagtagaatatattgaattgggagtggtgaaagtagtattaattagagttataa 1334889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 53051180 - 53050979
Alignment:
Q  89 catttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctc-tttatcataaat 187  Q
    ||||||||||  ||||||||||| ||||| |   |||||||||||||||| | || ||||||| || |||| |||| |||||||||  ||||||||||||    
T  53051180 catttcacacagattaagaaaag-tgtataaagtaaagagagagaaaaatagttttgagtgcctttttcaagtatttgtgcattcttgtttatcataaat 53051082  T
Q  188 tcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggt 287  Q
      |||||| |||||||||||||| |||| ||||||||| |||||||||  ||||||||||       ||||||||||||| ||||||||||||||||| |    
T  53051081 gtaaagtataatatattgaattgggagttgtgaaagtagtattaattagagttataattggagaaaagtaattaatattgcattgaaaagtgaaatggat 53050982  T
Q  288 caa 290  Q
    |||    
T  53050981 caa 53050979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 87 - 343
Target Start/End: Original strand, 38600757 - 38601018
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataa 185  Q
    |||||||| |||  ||||||||||| ||||| | ||||| |||||||||||||  || |||| || ||||||| |||||||||||||| ||||| |||||    
T  38600757 ctcatttcgcacagattaagaaaag-tgtataaatgaaaaagagagaaaaatgattttgagtccctttatcaagtattggtgcattcttctttaccataa 38600855  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgg 285  Q
    ||  |||||| ||||||||||| || ||||| |||||||| |||||||||  ||||||| ||       ||||||||||||||||||||| ||||||||     
T  38600856 atgtaaagtataatatattgaactgggagtgatgaaagtagtattaattagagttataaatg-gaaagagtaattaatattgtattgaaaggtgaaatga 38600954  T
Q  286 gtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagtat 343  Q
     ||||||      | ||||| ||||| || ||||| ||||||||||||||||| ||| ||||||    
T  38600955 ctcaattattttagaacaatttttttttgcaaatgactcagttattatgggacggagggagtat 38601018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 104 - 247
Target Start/End: Complemental strand, 41287402 - 41287258
Alignment:
Q  104 aagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatata 202  Q
    |||||||  ||||| |||||||||||||||||||||| || || |  | || |||| ||||| |||||| | |||||||||||||  |||||||||||||    
T  41287402 aagaaaacatgtataagtgaaagagagagaaaaatggttttgactatctttgtcaagtattgatgcattattctttatcataaatgtaaagtagaatata 41287303  T
Q  203 ttgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    ||||||||||||| |||||| ||||||||||||  ||||||||||    
T  41287302 ttgaattgagagttgtgaaattaatattaattagagttataattg 41287258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 90 - 284
Target Start/End: Complemental strand, 51165105 - 51164911
Alignment:
Q  90 atttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaatt 188  Q
    |||||||||  ||||||||||| ||||| | | ||||||||||||||||   || ||||| | ||||||| |||||||||||||| |||||||||||||     
T  51165105 atttcacacaaattaagaaaag-tgtataaataaaagagagagaaaaataattttgagtgtctttatcaagtattggtgcattcttctttatcataaatg 51165007  T
Q  189 caaagtagaatatattgaattgagagtggtgaaagtaata-ttaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
     ||||||||||||||||||||  |||| ||||||||| || |||||||  |||||||  |       ||||||||||||||||||||||||||||||    
T  51165006 taaagtagaatatattgaatttggagtagtgaaagtagtacttaattagagttataa-agggaaaaagtaattaatattgtattgaaaagtgaaatg 51164911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 88 - 280
Target Start/End: Original strand, 44218986 - 44219177
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaa 186  Q
    ||||||||||| ||||||||||| |||||| ||| ||||| |||||||||||| || ||||| | || | || | ||||||||||| |  ||||||||||    
T  44218986 tcatttcacacatattaagaaaaagtgtataagtcaaagaaagagaaaaatggttttgagtgtc-ttgt-aagtgttggtgcattccccattatcataaa 44219083  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtga 280  Q
    | ||||||||||||||||||||||  |||  ||||| || |||||||||  ||||||||||       ||||||||||||| ||||||||||||    
T  44219084 tacaaagtagaatatattgaattggaagtaatgaaaatagtattaattagagttataattggaaaaaagtaattaatattgcattgaaaagtga 44219177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 86 - 342
Target Start/End: Original strand, 21585360 - 21585622
Alignment:
Q  86 actcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcata 184  Q
    ||||||| |||| ||||| ||||||  | ||| |||||| || |||||||||||  || ||||| | || | || ||||||| |||||| ||||||||||    
T  21585360 actcattccacatttattgagaaaaa-tatattagtgaaggacagagaaaaatgattttgagtgtctttgttaattattggttcattcttctttatcata 21585458  T
Q  185 aattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    |||  ||| |||||||||||| ||||  |||||||||||||||||||||||  ||||||||||        ||||||||||||||||| |||||||||||    
T  21585459 aatgtaaaatagaatatattgtattggaagtggtgaaagtaatattaattagagttataattgggaaaaaataattaatattgtattggaaagtgaaatg 21585558  T
Q  285 ggtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagta 342  Q
      ||| ||      ||||| | ||||  |||||||| |||||||||||||| || |||||||||    
T  21585559 actcagttattttgggacacttttttattgaaaatgactcagttattatggaacggagagagta 21585622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 88 - 287
Target Start/End: Original strand, 32977742 - 32977941
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaa 186  Q
    |||||||||||  ||||||||||| ||||| |   |||||| ||||||||| | || ||||||  || |||| ||||| |||||| | ||||||||||||    
T  32977742 tcatttcacacggattaagaaaag-tgtataaagtaaagagggagaaaaatagttttgagtgcatttttcaagtattgatgcatttttctttatcataaa 32977840  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatggg 286  Q
    |  ||  |||||||||||||||||||||| ||||||||| |||||||||  ||||||||||        |||||||| ||| ||||||||||||||||||    
T  32977841 tgtaatttagaatatattgaattgagagttgtgaaagtagtattaattagagttataattggagaaaaataattaatgttgcattgaaaagtgaaatggg 32977940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 81 - 187
Target Start/End: Original strand, 36790765 - 36790872
Alignment:
Q  81 ccttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tcttta 179  Q
    ||||||||||||| ||| ||||||| ||||  ||||| ||||||||||||||||||||| ||| ||| || ||||||||||||||||| |||| ||||||    
T  36790765 ccttgactcattttacatttattaaaaaaaattgtataagtgaaagagagagaaaaatgagtttgagcgcacttatcaactattggtgtattcttcttta 36790864  T
Q  180 tcataaat 187  Q
    ||||||||    
T  36790865 tcataaat 36790872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 235
Target Start/End: Original strand, 54021412 - 54021557
Alignment:
Q  90 atttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaatt 188  Q
    |||||||||  ||| ||||||| ||||| | | |||||||||||||||||  || ||||| | ||||||| ||||| |||||||| |||||| ||||||     
T  54021412 atttcacacagattgagaaaag-tgtataaataaaagagagagaaaaatgattttgagtgtctttatcaaatattgttgcattcttctttattataaatg 54021510  T
Q  189 caaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
     ||||||||||||||||||||  |||||||||||||| |||||||||    
T  54021511 taaagtagaatatattgaattcggagtggtgaaagtagtattaatta 54021557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 284
Target Start/End: Original strand, 3862213 - 3862319
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaa 276  Q
    ||||||||||| |||| || |||||| ||||||||||||| ||||||||||||||||||  ||||||||||       |||||||| |||||||||||||    
T  3862213 ttatcataaatgcaaattaaaatatactgaattgagagtgatgaaagtaatattaattagagttataattg-aaaaaagtaattaaaattgtattgaaaa 3862311  T
Q  277 gtgaaatg 284  Q
    ||||||||    
T  3862312 gtgaaatg 3862319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 284
Target Start/End: Original strand, 21296545 - 21296651
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    |||||||||| ||||||||||||||||||||||  ||| ||||||||| |||||||||  |||||||  |       |||||||||||||||||||||||    
T  21296545 tatcataaatgcaaagtagaatatattgaattggaagttgtgaaagtagtattaattagagttataaaaggaaaaaagtaattaatattgtattgaaaag 21296644  T
Q  278 tgaaatg 284  Q
    |||||||    
T  21296645 tgaaatg 21296651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 187
Target Start/End: Original strand, 24618882 - 24618979
Alignment:
Q  91 tttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataaat 187  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||||||| ||  |||||| |||||||||| ||||| |||| |||||| |||||||    
T  24618882 tttcacacttattaagaaaaagtgtataagtgaaagggagagaaaaatggttttaagtgcctttatcaactagtggtgtattcttctttagcataaat 24618979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 284
Target Start/End: Original strand, 32023125 - 32023249
Alignment:
Q  161 tattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaat 259  Q
    |||||||||||||||   ||| |||||| |||||| ||||||||||||||||||||| ||||||||||||||||||  |||||||  |        ||||    
T  32023125 tattggtgcattctccactattataaatgcaaagttgaatatattgaattgagagtgatgaaagtaatattaattagagttataaagggaaaaaaataat 32023224  T
Q  260 taatattgtattgaaaagtgaaatg 284  Q
    ||||||||||||| |||||||||||    
T  32023225 taatattgtattggaaagtgaaatg 32023249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 107 - 345
Target Start/End: Original strand, 53754034 - 53754280
Alignment:
Q  107 aaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattg 205  Q
    |||| |||||| | ||||| |||||||||||||  || ||||| | ||   || |||||||||||||| |||||||||||||  ||||||||||||||||    
T  53754034 aaaaagtgtataaatgaaatagagagaaaaatgattttgagtgtctttggtaagtattggtgcattcttctttatcataaatgtaaagtagaatatattg 53754133  T
Q  206 aattgagagtggtgaaagtaatattaattaatgttataattg-nnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaa------ttggacaa 298  Q
    |||| ||| | || |||||| |||||||||  ||||||||||         |||||||| |||||||||||| ||||||| |||||      |  |||||    
T  53754134 aattaagaatagtaaaagtagtattaattagagttataattgaaaaaaaaataattaatgttgtattgaaaactgaaatgagtcaagattactgtgacaa 53754233  T
Q  299 tatttttgtgaaaatggctcagttattatgggactgagagagtataa 345  Q
    || |||| |  ||||| ||||||||||||||||| ||| ||||||||    
T  53754234 taattttttataaatgactcagttattatgggacggagcgagtataa 53754280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 91 - 292
Target Start/End: Original strand, 42547061 - 42547262
Alignment:
Q  91 tttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaattc 189  Q
    |||||||| |||||||||||  | ||| ||| ||||||||| |||||| | || || || | || | || |||||||||||||| | ||||||||||| |    
T  42547061 tttcacacatattaagaaaaaatttataagtaaaagagagaaaaaaatagttttgaatgtc-ttgttaagtattggtgcattctttcttatcataaatgc 42547159  T
Q  190 aaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtca 289  Q
    |||  |||||||||||||||| ||||| |||||||| |||||||||  | |||||||         |||||| | |||||||||||||||||||| ||||    
T  42547160 aaaagagaatatattgaattgggagtgatgaaagtagtattaattagagctataatttgaataaaataattattgttgtattgaaaagtgaaatgagtca 42547259  T
Q  290 att 292  Q
    |||    
T  42547260 att 42547262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 285
Target Start/End: Complemental strand, 5245535 - 5245370
Alignment:
Q  121 tgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtg 219  Q
    |||| ||||||||||||| | ||  ||||| ||| | || |||||||| ||||||   |||||||||| |||||| ||||||||||||||||||||| ||    
T  5245535 tgaaggagagagaaaaatagttttaagtgctcttgttaagtattggtgtattctccaatatcataaatacaaagtggaatatattgaattgagagtgatg 5245436  T
Q  220 aaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgg 285  Q
    |||||  |||||||||  |||||||  |       |||||||||  ||||||||||||||||||||    
T  5245435 aaagtggtattaattagagttataaagggaaaaatgtaattaatcatgtattgaaaagtgaaatgg 5245370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 29858884 - 29858964
Alignment:
Q  156 tcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    |||| ||||||| |||||| |||||||||||||  ||||||||||||||||||||  |||||||||||||| |||||||||    
T  29858884 tcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattatgagtggtgaaagtagtattaatta 29858964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 285
Target Start/End: Complemental strand, 2868730 - 2868532
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataa 185  Q
    |||||||||||| |||||||||||  ||||| | |||| ||||||||||||||| ||  ||| |  || | |  ||||| |||||||||   | ||||||    
T  2868730 ctcatttcacacatattaagaaaaa-tgtataaatgaaggagagagaaaaatggttttaagttcttttgttatgtattgctgcattctccactgtcataa 2868632  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgg 285  Q
    || |||||| ||||| || |||||| ||||| ||||||||||||||||||  ||| |||||         ||||||||||||||||||||||||||||||    
T  2868631 atgcaaagtggaataaatcgaattgggagtgatgaaagtaatattaattagagttgtaattagaaaaaaataattaatattgtattgaaaagtgaaatgg 2868532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 87 - 292
Target Start/End: Original strand, 17776945 - 17777150
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataa 185  Q
    |||||||||||| |||||| ||||  ||||| | |||| ||||||||||||||| ||   ||||  || | || |||| ||||||||||   || |||||    
T  17776945 ctcatttcacacgtattaaaaaaaa-tgtataaatgaatgagagagaaaaatggttttaggtgctttttttaagtatttgtgcattctccactaccataa 17777043  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgg 285  Q
    || |||||| ||||||||||||| ||||||| ||||| ||||||||||||  |||||| |||        |||||||| || |||||||| |||||||||    
T  17777044 atgcaaagtggaatatattgaatcgagagtgatgaaaataatattaattagagttatatttgaaaaaaattaattaatgttatattgaaaggtgaaatgg 17777143  T
Q  286 gtcaatt 292  Q
     ||||||    
T  17777144 atcaatt 17777150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 87 - 292
Target Start/End: Original strand, 19078246 - 19078451
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataa 185  Q
    |||||||||||| |||||| ||||  ||||| | |||| ||||||||||||||| ||   ||||  || | || |||| ||||||||||   || |||||    
T  19078246 ctcatttcacacgtattaaaaaaaa-tgtataaatgaatgagagagaaaaatggttttaggtgctttttttaagtatttgtgcattctccactaccataa 19078344  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgg 285  Q
    || |||||| ||||||||||||| ||||||| ||||| ||||||||||||  |||||| |||        |||||||| || |||||||| |||||||||    
T  19078345 atgcaaagtggaatatattgaatcgagagtgatgaaaataatattaattagagttatatttgaaaaaaattaattaatgttatattgaaaggtgaaatgg 19078444  T
Q  286 gtcaatt 292  Q
     ||||||    
T  19078445 atcaatt 19078451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 292
Target Start/End: Complemental strand, 8498337 - 8498206
Alignment:
Q  161 tattggtgcattc-tctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaat 259  Q
    ||||||||||||| || ||| | ||||| || |||| |||||||||||||||||||||| ||||||  |||| |||  |||||| |||        ||||    
T  8498337 tattggtgcattcctccttaccttaaatgcagagtaaaatatattgaattgagagtggtaaaagtagaattacttatagttatagttggaaaaaa-taat 8498239  T
Q  260 taatattgtattgaaaagtgaaatgggtcaatt 292  Q
    |||||||||||||||||||||||||| ||||||    
T  8498238 taatattgtattgaaaagtgaaatggatcaatt 8498206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 52325260 - 52325173
Alignment:
Q  161 tattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    |||||||||||||| |  |||||||||| |||||| |||||||||||||||||| ||  ||||||| |||||||||  ||||||||||    
T  52325260 tattggtgcattctacgctatcataaatgcaaagtggaatatattgaattgagaatgacgaaagtagtattaattagagttataattg 52325173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 197 - 284
Target Start/End: Complemental strand, 41031618 - 41031531
Alignment:
Q  197 aatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    ||||||||||||||  | || |||||||| |||||||||| ||||||| ||       ||||||||||||||||||||||||||||||    
T  41031618 aatatattgaattggaaatgatgaaagtagtattaattaaagttataaatggaaaaaagtaattaatattgtattgaaaagtgaaatg 41031531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 284
Target Start/End: Complemental strand, 33994813 - 33994616
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataa 185  Q
    |||||||||||| ||| |||||||  ||||| | |||| |||||||||||||   ||  ||||| ||| | || |||||||||||||||   ||||||||    
T  33994813 ctcatttcacacgtatcaagaaaaa-tgtataaatgaaggagagagaaaaataattttaagtgcacttgttaagtattggtgcattctccactatcataa 33994715  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    ||  ||||| |||||||||||| ||||| || |||||||  |||||||||  |||||||  |        || ||||||||||||||||||||||||||    
T  33994714 atgtaaagtggaatatattgaactgagaatgatgaaagtggtattaattagagttataaagggaaaaaaatatttaatattgtattgaaaagtgaaatg 33994616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 36097703 - 36097752
Alignment:
Q  184 aaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaat 233  Q
    |||| |||||| ||||||||||||||||||||| ||||||||||||||||    
T  36097703 aaatgcaaagtggaatatattgaattgagagtgatgaaagtaatattaat 36097752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 178 - 283
Target Start/End: Complemental strand, 15280670 - 15280565
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    ||||||||||  ||||| ||||||||||||||| ||||| |||||||| |||||||||  |||||||  |       |||||||||  ||||||||||||    
T  15280670 tatcataaatggaaagtggaatatattgaattgggagtgatgaaagtagtattaattagggttataaaaggaaaaaagtaattaatgatgtattgaaaag 15280571  T
Q  278 tgaaat 283  Q
    ||||||    
T  15280570 tgaaat 15280565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 177 - 284
Target Start/End: Original strand, 46627966 - 46628070
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaa 276  Q
    ||||||||||| ||||||| |||||||||||| |||| || | |||||| |||||||||   |||||| ||       ||||||||||||| ||||||||    
T  46627966 ttatcataaatgcaaagtataatatattgaatagagaatgataaaagtagtattaatta---ttataaatgaaaaacagtaattaatattgcattgaaaa 46628062  T
Q  277 gtgaaatg 284  Q
    ||||||||    
T  46628063 gtgaaatg 46628070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 332
Target Start/End: Complemental strand, 41287030 - 41286952
Alignment:
Q  258 attaatattgtattgaaaagtgaaatgggtcaatt-----ggacaatatttttgtgaaaatggctcagttattatgggac 332  Q
    |||||||||||||||||||||||||||| ||||||     ||||||||||||| || ||||| |||| ||||||||||||    
T  41287030 attaatattgtattgaaaagtgaaatggatcaattttttgggacaatattttt-tgcaaatgactcatttattatgggac 41286952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 284
Target Start/End: Original strand, 27668368 - 27668474
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaa 276  Q
    ||||||||||| ||||||  ||||||||||||| |||||| | |||||| |||||||||  |||||||||         ||||||||||| |||||||||    
T  27668368 ttatcataaatgcaaagtgaaatatattgaattaagagtgataaaagtagtattaattagagttataatt-aaaacaaataattaatattatattgaaaa 27668466  T
Q  277 gtgaaatg 284  Q
    ||||||||    
T  27668467 gtgaaatg 27668474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 247
Target Start/End: Complemental strand, 45746428 - 45746362
Alignment:
Q  181 cataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    ||||||| ||||||||||||||| || || |||||| |||||||| |||||||||  ||||||||||    
T  45746428 cataaatgcaaagtagaatatatggagttaagagtgatgaaagtagtattaattagagttataattg 45746362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 47496236 - 47496166
Alignment:
Q  176 tttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    ||||||||||||  |||||  ||||||||||||| |||||| |||||||| |||||||||  |||||||||    
T  47496236 tttatcataaatgtaaagtctaatatattgaattaagagtgatgaaagtagtattaattagagttataatt 47496166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 225
Target Start/End: Original strand, 49122169 - 49122223
Alignment:
Q  171 ttctctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagta 225  Q
    |||| |||||||||||| |||||||||||||||||||||  ||||| ||||||||    
T  49122169 ttctatttatcataaatgcaaagtagaatatattgaattatgagtgatgaaagta 49122223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 290
Target Start/End: Complemental strand, 50736153 - 50736054
Alignment:
Q  191 aagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaa 290  Q
    ||||||||||||||||||||  ||| ||||||||| |||||||||  |||||| |||       ||||||||| || ||||||||| ||||||| |||||    
T  50736153 aagtagaatatattgaattggaagtagtgaaagtagtattaattagagttatagttggaaaaaagtaattaatgttctattgaaaactgaaatgagtcaa 50736054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 50776702 - 50776801
Alignment:
Q  191 aagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaa 290  Q
    ||||||||||||||||||||  ||| ||||||||| |||||||||  |||||| |||       ||||||||| || ||||||||| ||||||| |||||    
T  50776702 aagtagaatatattgaattggaagtagtgaaagtagtattaattagagttatagttggaaaaaagtaattaatgttctattgaaaactgaaatgagtcaa 50776801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 26479949 - 26479986
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    |||||||||||||||||||||||| |||||||||||||    
T  26479949 gtaattaatattgtattgaaaagtaaaatgggtcaatt 26479986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 36790992 - 36791029
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    |||||||||||||||||||||||||||||| |||||||    
T  36790992 gtaattaatattgtattgaaaagtgaaatgagtcaatt 36791029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 53876478 - 53876535
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    ||||||||||  |||||  |||||||||||||||||||| ||||||||| ||||||||    
T  53876478 tatcataaatgtaaagtgaaatatattgaattgagagtgatgaaagtaaaattaatta 53876535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 234
Target Start/End: Complemental strand, 9017957 - 9017810
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataa 185  Q
    |||||||||||| |||||| ||||  ||||| | |||||||||||||||||| | ||  |||||  || | || |||||||||||||||   ||| ||||    
T  9017957 ctcatttcacacatattaaaaaaaa-tgtataaatgaaagagagagaaaaatagttttaagtgcttttgttaagtattggtgcattctccactattataa 9017859  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaatt 234  Q
    || ||||||  ||||||||||||||  |||| |||||  ||||||||||    
T  9017858 atgcaaagtgaaatatattgaattggaagtgatgaaaacaatattaatt 9017810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 54458337 - 54458417
Alignment:
Q  165 ggtgcattctct-ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||||||  |||||||||||  ||||| |||||||||||||||||| ||  ||||  |||||||||||| |||||||    
T  54458337 ggtgcattctccattatcataaatgtaaagtggaatatattgaattgagaatgaggaaaacaatattaattaaggttataa 54458417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 290
Target Start/End: Original strand, 36317717 - 36317752
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaa 290  Q
    |||||||||||||||||| |||||||||||||||||    
T  36317717 gtaattaatattgtattggaaagtgaaatgggtcaa 36317752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 26134745 - 26134811
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||||| ||||||  |||||||||||||| ||||| |||||||| || ||||||  |||||||    
T  26134745 tatcataaatgcaaagtgaaatatattgaattgggagtgatgaaagtagtactaattagagttataa 26134811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 228
Target Start/End: Original strand, 36317359 - 36317397
Alignment:
Q  190 aaagtagaatatattgaattgagagtggtgaaagtaata 228  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  36317359 aaagcagaatatattgaattgagagtggtgaaagcaata 36317397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 43639558 - 43639624
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||||| ||||||  ||||||||||||||  ||| ||||||||| |||||||||  |||||||    
T  43639558 tatcataaatgcaaagtgaaatatattgaattggaagttgtgaaagtagtattaattagagttataa 43639624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 46786023 - 46786089
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||||| ||||||  |||||||||||||| ||| | |||||||| |||||| ||| |||||||    
T  46786023 tatcataaatgcaaagtgaaatatattgaattgggagcgatgaaagtagtattaactaaagttataa 46786089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 130
Target Start/End: Complemental strand, 47684896 - 47684854
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagag 130  Q
    ||||||||||| |||||||||||||||||  ||||||||||||    
T  47684896 tcatttcacacatattaagaaaaggtgtacaagtgaaagagag 47684854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 225
Target Start/End: Complemental strand, 10855057 - 10855012
Alignment:
Q  180 tcataaattcaaagtagaatatattgaattgagagtggtgaaagta 225  Q
    |||||||| |||||| |||||||||||||||| |||| ||||||||    
T  10855057 tcataaatgcaaagtggaatatattgaattgaaagtgatgaaagta 10855012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 11529153 - 11529210
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    |||||||||| |||||| ||||||||| ||||  ||||| | ||||||||||||||||    
T  11529153 tatcataaatgcaaagtggaatatattaaattatgagtgataaaagtaatattaatta 11529210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 284
Target Start/End: Original strand, 43640684 - 43640713
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatg 284  Q
    ||||||||||||||||||||||||||||||    
T  43640684 gtaattaatattgtattgaaaagtgaaatg 43640713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 7885803 - 7885751
Alignment:
Q  183 taaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    ||||| ||||||| |||| ||||||||||||||| |||||||  |||||||||    
T  7885803 taaatgcaaagtataatacattgaattgagagtgatgaaagttgtattaatta 7885751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 16276498 - 16276458
Alignment:
Q  195 agaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    ||||||||||||||   ||||||||||||||||||||||||    
T  16276498 agaatatattgaatctggagtggtgaaagtaatattaatta 16276458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 35300703 - 35300655
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagta 225  Q
    |||||||||||  |||||| |||||||||||| ||||||| ||||||||    
T  35300703 ttatcataaatgtaaagtaaaatatattgaatagagagtgatgaaagta 35300655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 45241071 - 45241007
Alignment:
Q  183 taaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    ||||| |||||||||||| |||||| | |||||| | |||||| |||||||||  ||||||||||    
T  45241071 taaatgcaaagtagaatacattgaactaagagtgataaaagtagtattaattatagttataattg 45241007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 161 - 244
Target Start/End: Original strand, 54122248 - 54122332
Alignment:
Q  161 tattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||||||||||   |||||||||| ||||||  ||||||||||||||  ||| ||||||||| |||| ||||  |||||||    
T  54122248 tattggtgcattctccactatcataaatgcaaagtgaaatatattgaattggaagttgtgaaagtagtattgattagagttataa 54122332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 159; Significance: 1e-84; HSPs: 85)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 80 - 343
Target Start/End: Complemental strand, 14690124 - 14689854
Alignment:
Q  80 cccttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tcttt 178  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| || ||||| ||||||||||||||||||||||| | |||    
T  14690124 cccttgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatggttttgagtgtccttatcaactattggtgcattctttttt 14690025  T
Q  179 atcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagt 278  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||       ||||||||||||||||||||||||    
T  14690024 atcataaatgcaaagtagaatatattgaattgggagtggtgaaagtagtattaattagtgttataattggaaaaaagtaattaatattgtattgaaaagt 14689925  T
Q  279 gaaatgggtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagtat 343  Q
    ||||||||||||||      ||||||||||||| || ||||| ||||||||||||||||| ||| ||||||    
T  14689924 gaaatgggtcaatttttctgggacaatatttttttgcaaatgactcagttattatgggacggagggagtat 14689854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 87 - 342
Target Start/End: Original strand, 45420889 - 45421152
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataa 185  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||| |||||| |||| |||||| ||||||||||||    
T  45420889 ctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcccttgtcaacttttggagcattcttctttatcataa 45420988  T
Q  186 attcaaagtagaatatattgaattgagagtggtg-aaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    || ||||||| ||||||||||||   |||||||| |||||| ||||||||| |||||||||||       ||||||||||||||||||||||||||||||    
T  45420989 atgcaaagtaaaatatattgaatcaggagtggtgaaaagtagtattaattagtgttataattggaaaaaagtaattaatattgtattgaaaagtgaaatg 45421088  T
Q  285 ggtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagta 342  Q
    ||| ||||      ||||||||||||| || ||||||||||||| |||||| || ||| |||||    
T  45421089 ggttaatttatctgggacaatatttttttgtaaatggctcagttgttatggaacggagggagta 45421152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 80 - 326
Target Start/End: Original strand, 14748647 - 14748903
Alignment:
Q  80 cccttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaat--gggttagagtgcccttatcaactattggtgcattct-ct 176  Q
    |||||||||||||| |||||||||||||||| |||||| ||||||||||||||| ||||  ||||| |||||| ||||||||||||| ||||||||| ||    
T  14748647 cccttgactcattttacacttattaagaaaaagtgtataagtgaaagagagagagaaatatgggtttgagtgctcttatcaactattagtgcattcttct 14748746  T
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt-gnnnnnnngtaattaatattgtattgaaa 275  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||| |       |||||||||||||||||||||    
T  14748747 ttatcataaatgcaaagtagaatatattgaattgagaatggtgaaagtagtattaattagtgttataattggaaaaaaagtaattaatattgtattgaaa 14748846  T
Q  276 agtgaaatgggtcaatt------ggacaatatttttgtgaaaatggctcagttatta 326  Q
    ||| |||||| ||||||      | ||||||||||| || ||||||||| |||||||    
T  14748847 agtaaaatggatcaatttttctggaacaatatttttttgcaaatggctcggttatta 14748903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 81 - 292
Target Start/End: Original strand, 886392 - 886604
Alignment:
Q  81 ccttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-cttta 179  Q
    ||||| |||||||||||||||||||||||| |||||  ||||||||||||||  ||||| ||| || || |||||||||||||  ||||||||| |||||    
T  886392 ccttggctcatttcacacttattaagaaaaagtgtacaagtgaaagagagagggaaatgagtttgattgtccttatcaactatctgtgcattcttcttta 886491  T
Q  180 tcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtg 279  Q
    |||||||| ||||||||||||||| ||||||||| || | |||||||||||||||| |||||||||||       |||||||||||||||||||||||||    
T  886492 tcataaatgcaaagtagaatatatcgaattgagaatgataaaagtaatattaattagtgttataattgaaaaaaagtaattaatattgtattgaaaagtg 886591  T
Q  280 aaatgggtcaatt 292  Q
    ||||| |||||||    
T  886592 aaatgagtcaatt 886604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 91 - 342
Target Start/End: Complemental strand, 2195620 - 2195363
Alignment:
Q  91 tttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaattc 189  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||| | || ||||| | || | || |||||||||||||| | ||||||||||| |    
T  2195620 tttcacacatattaagaaaaagtgtataagtgaaagagagagaaaaatagttttgagtgtc-ttgttaagtattggtgcattctttcttatcataaatgc 2195522  T
Q  190 aaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtca 289  Q
    ||||||||||||||||||||| ||||| |||||||| |||||||||  ||||||||||       ||||||| | |||||||||||||||||||||||||    
T  2195521 aaagtagaatatattgaattgggagtgatgaaagtagtattaattagagttataattggaaaaaagtaattattgttgtattgaaaagtgaaatgggtca 2195422  T
Q  290 att------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagta 342  Q
    |||      |||||| |||||| || ||||| ||||||||||||||||| |||||||||    
T  2195421 atttttttgggacaacatttttttgcaaatgactcagttattatgggacggagagagta 2195363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 83 - 292
Target Start/End: Original strand, 25174531 - 25174741
Alignment:
Q  83 ttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatc 181  Q
    ||||||||||||| | ||||||||||||  ||||| ||| ||||||||| || ||||  || |||||||||||| ||||||||||||||| | ||||||     
T  25174531 ttgactcatttcatatttattaagaaaaaatgtataagtaaaagagagaaaagaatgattttgagtgcccttattaactattggtgcattattctttatt 25174630  T
Q  182 ataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaa 281  Q
    |||||| ||||||||||||||||||||||||||| | ||||||||||||||||| ||||||| |||       |||||||||||| ||||||||||||||    
T  25174631 ataaatgcaaagtagaatatattgaattgagagtagggaaagtaatattaattagtgttatagttggaaaaatgtaattaatattatattgaaaagtgaa 25174730  T
Q  282 atgggtcaatt 292  Q
    |||||||||||    
T  25174731 atgggtcaatt 25174741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 88 - 292
Target Start/End: Complemental strand, 33743932 - 33743726
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataaa 186  Q
    ||||||||||||||||||||||| |||||| | ||||||||||||||||||||||| |||||  ||||||||||||| |||||||| |||||||||||||    
T  33743932 tcatttcacacttattaagaaaaagtgtataaatgaaagagagagaaaaatgggtttgagtgtacttatcaactatttgtgcattcttctttatcataaa 33743833  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataat-tgnnnnnnngtaattaatattgtattgaaaagtgaaatgg 285  Q
    | |||||||||||||||| ||||| ||||| |||||||||||||||||| || || |||  |        ||||||||||||||||||||||| |||||     
T  33743832 tacaaagtagaatatattaaattgtgagtgatgaaagtaatattaattagtggtaaaataggaaaaaaaataattaatattgtattgaaaagttaaatga 33743733  T
Q  286 gtcaatt 292  Q
    |||||||    
T  33743732 gtcaatt 33743726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 87 - 326
Target Start/End: Original strand, 1494198 - 1494442
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataa 185  Q
    |||||||||||||||||||| |||  |||||  ||||||||| ||||||||||  || ||||||||||||||| ||||| ||||||| ||||||||||||    
T  1494198 ctcatttcacacttattaaggaaaaatgtatatgtgaaagagtgagaaaaatgattttgagtgcccttatcaattattgatgcattcttctttatcataa 1494297  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgg 285  Q
    || ||||||||||||||||  |||   ||| ||||||||||||||||||| ||||||||||        |||||||||||||| | ||||||||||||||    
T  1494298 atgcaaagtagaatatatt--attagaagtagtgaaagtaatattaattagtgttataatt-aaaaaaagtaattaatattgtttagaaaagtgaaatgg 1494394  T
Q  286 gtcaatt-------ggacaatatttttgtgaaaatggctcagttatta 326  Q
    |||||||       ||||||||||||| || ||| |||||||||||||    
T  1494395 gtcaattttttctaggacaatatttttttgcaaaaggctcagttatta 1494442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 29638455 - 29638254
Alignment:
Q  89 catttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaat 187  Q
    ||||||||||  ||||||||||| ||||| | ||||||| |||||||||||| || || |||| || |||| ||||||| |||| | |||||||||||||    
T  29638455 catttcacacagattaagaaaag-tgtataaatgaaagaaagagaaaaatggttttgaatgcctttgtcaagtattggttcattattctttatcataaat 29638357  T
Q  188 tcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggt 287  Q
      |||||| |||||||||||||  ||||||||||||||||||||||||  ||||||||||       ||||||||| |||||||||||||||||||||||    
T  29638356 gtaaagtataatatattgaattaggagtggtgaaagtaatattaattagagttataattgagaaaaggtaattaatgttgtattgaaaagtgaaatgggt 29638257  T
Q  288 caa 290  Q
    |||    
T  29638256 caa 29638254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 41759613 - 41759739
Alignment:
Q  120 gtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggt 218  Q
    |||||||||||| ||||||| ||| ||||| |||| |||| |||||||||||||| ||||||||||||| ||||||| |||||||||||||| |||| ||    
T  41759613 gtgaaagagagaaaaaaatgagtttgagtgtccttgtcaattattggtgcattcttctttatcataaatacaaagtaaaatatattgaattgggagtagt 41759712  T
Q  219 gaaagtaatattaattaatgttataat 245  Q
    |||||||||||||||||||||||||||    
T  41759713 gaaagtaatattaattaatgttataat 41759739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 28791462 - 28791261
Alignment:
Q  89 catttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaat 187  Q
    ||||||||||  ||||||||||| ||||| |   |||||||||||||||| | || ||||||| || |||| |||||||||||||| |||||||||||||    
T  28791462 catttcacacagattaagaaaag-tgtataaagtaaagagagagaaaaatagttttgagtgcctttttcaagtattggtgcattcttctttatcataaat 28791364  T
Q  188 tcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggt 287  Q
      ||| ||||||||||||||||| |||| ||||||||| |||||||||  ||||||||||       ||||||||| ||| |||||||||||||||||||    
T  28791363 gtaaactagaatatattgaattgggagttgtgaaagtagtattaattagagttataattggagaaaagtaattaatgttgcattgaaaagtgaaatgggt 28791264  T
Q  288 caa 290  Q
    |||    
T  28791263 caa 28791261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 86 - 225
Target Start/End: Original strand, 8394202 - 8394344
Alignment:
Q  86 actcatttcacacttattaagaaaaggtgtatgagtgaaagaga--gagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatca 182  Q
    ||||||||||||||||||||||||| |||||| |||  ||||||  |||||||||| |||  | ||| ||||||||||||||||||||| | ||||||||    
T  8394202 actcatttcacacttattaagaaaaagtgtataagtataagagaaagagaaaaatgagtttaaatgctcttatcaactattggtgcattattctttatca 8394301  T
Q  183 taaattcaaagtagaatatattgaattgagagtggtgaaagta 225  Q
    ||||| ||||||| |||||||||||||||||||||||||||||    
T  8394302 taaatacaaagtaaaatatattgaattgagagtggtgaaagta 8394344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 88 - 344
Target Start/End: Complemental strand, 2797195 - 2796932
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaa 186  Q
    ||||||||||  ||||||||||| ||| || ||||||||| |||||||||||| || |||||   || |||  || || ||||||||   ||||||||||    
T  2797195 tcatttcacaactattaagaaaaagtgaataagtgaaagaaagagaaaaatggttttgagtgtt-ttgtcatttactgatgcattcttacttatcataaa 2797097  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt-gnnnnnnngtaattaatattgtattgaaaagtgaaatgg 285  Q
    | |||||||||||||||||||||| ||||  ||||||||||||||||||  ||||||||| |        |||||||||||||||||||||||||||||     
T  2797096 tgcaaagtagaatatattgaattgggagtaatgaaagtaatattaattagagttataattggtaaaaaaataattaatattgtattgaaaagtgaaatga 2796997  T
Q  286 gtcaa------ttggacaatatttttgtgaaaatggctcagttattatgggactgagagagtata 344  Q
    |||||      ||| ||||||||||| || |||||||||| |||||||||||| ||| |||||||    
T  2796996 gtcaagtttttttgaacaatatttttttgcaaatggctcacttattatgggacggagggagtata 2796932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 225
Target Start/End: Original strand, 8566060 - 8566200
Alignment:
Q  83 ttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgca---ttctcttta 179  Q
    |||||||||||||||||||||||||||| |||||| |||||||||| |||||||||| ||| ||||||||||||||||||||| ||||   || ||||||    
T  8566060 ttgactcatttcacacttattaagaaaacgtgtataagtgaaagagggagaaaaatgtgtttgagtgcccttatcaactattgatgcatttttttcttta 8566159  T
Q  180 tcataaattcaaagtagaatatattgaattgagagtggtgaaagta 225  Q
    ||||||||     | ||||||||||||||||  |||||||||||||    
T  8566160 tcataaat-----gcagaatatattgaattggaagtggtgaaagta 8566200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 87 - 289
Target Start/End: Original strand, 42412334 - 42412536
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataa 185  Q
    |||||||||||| |||||||||||  ||||| |||||| ||||||||||||| | ||  ||||| ||| |||  |||||||||||||||  |||||||||    
T  42412334 ctcatttcacacatattaagaaaaa-tgtataagtgaatgagagagaaaaatagttttaagtgctcttgtcatatattggtgcattctccattatcataa 42412432  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgg 285  Q
    || |||||| ||||||||||||||| ||||| |||||||| |||||||||  | ||||||||       ||||||||||||| ||| ||||||||||||     
T  42412433 atgcaaagtggaatatattgaattgggagtgatgaaagtagtattaattagagctataattggaaaaaagtaattaatattgcattaaaaagtgaaatga 42412532  T
Q  286 gtca 289  Q
    ||||    
T  42412533 gtca 42412536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 91 - 290
Target Start/End: Original strand, 40077705 - 40077904
Alignment:
Q  91 tttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattc 189  Q
    |||||| | |||||||||||| ||||| | ||||||||||| |||||||  || ||||| | || |||| |||||||||||||| |||||||||||||      
T  40077705 tttcactcatattaagaaaag-tgtataaatgaaagagagaaaaaaatgattttgagtgtctttgtcaagtattggtgcattcttctttatcataaatgt 40077803  T
Q  190 aaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtca 289  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||   ||||||||||       ||||||||| ||||||  |||| ||||||||||||    
T  40077804 aaagtagaatatattgaatttggagttgtgaaagtaatattaatttgagttataattgaaaaaaagtaattaatgttgtatcaaaaactgaaatgggtca 40077903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 87 - 236
Target Start/End: Complemental strand, 39998319 - 39998170
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataa 185  Q
    ||||||||| || ||||||||||||  |||| | |||||||||||||||||||  ||  |||| | ||||||| |||| | ||||||| |||||||||||    
T  39998319 ctcatttcatacatattaagaaaaga-gtataaatgaaagagagagaaaaatgattttaagtgtctttatcaagtatttgagcattcttctttatcataa 39998221  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaa 236  Q
    ||  |||||||||||||||||||||||||||||||||||| ||||||||||    
T  39998220 atgtaaagtagaatatattgaattgagagtggtgaaagtagtattaattaa 39998170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 101 - 290
Target Start/End: Complemental strand, 14117604 - 14117415
Alignment:
Q  101 attaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaat 199  Q
    ||||||||||| ||||| |  ||||||||||||||| | | || ||||||| || |||| |||||||| ||||| |||||||||||||  ||||| ||||    
T  14117604 attaagaaaag-tgtataaaggaaagagagagaaaattagttttgagtgcctttttcaagtattggtgtattcttctttatcataaatgtaaagttgaat 14117506  T
Q  200 atattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaa 290  Q
    |||||||||||| ||| |||||||||||||||||||  ||||||||||         ||||||| |||||||||||||||||||| |||||    
T  14117505 atattgaattgaaagttgtgaaagtaatattaattagagttataattgaaaaaaaaaaattaatgttgtattgaaaagtgaaatgagtcaa 14117415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 127 - 284
Target Start/End: Complemental strand, 41726638 - 41726480
Alignment:
Q  127 agagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagta 225  Q
    ||||||||| || | || ||||||| || |||| ||||| |||||||| |||||||||||||  ||||||||||||||||||||| |||| |||||| ||    
T  41726638 agagagaaatatagttttgagtgcctttttcaagtattgttgcattcttctttatcataaatgtaaagtagaatatattgaattgggagttgtgaaatta 41726539  T
Q  226 atattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
     |||||||||  ||||||||||       ||||||||||||||||||||||||||||||    
T  41726538 gtattaattacagttataattgaaaaaaagtaattaatattgtattgaaaagtgaaatg 41726480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 184 - 292
Target Start/End: Original strand, 32231768 - 32231876
Alignment:
Q  184 aaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaat 283  Q
    |||| ||||||| |||||||||||||| |||||||||||||| ||||||||| |||||||||||       |||||||||||||||||||||||||||||    
T  32231768 aaatgcaaagtaaaatatattgaattgggagtggtgaaagtattattaattagtgttataattggaaaaaagtaattaatattgtattgaaaagtgaaat 32231867  T
Q  284 gggtcaatt 292  Q
    | |||||||    
T  32231868 gagtcaatt 32231876  T

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Target: chr8; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 80 - 187
Target Start/End: Original strand, 32231329 - 32231437
Alignment:
Q  80 cccttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tcttt 178  Q
    |||||| ||||||||||| ||||||||||||  ||||| |||||||||||||| ||||||| || ||||||||||||||||||||| || |||| |||||    
T  32231329 cccttgtctcatttcacatttattaagaaaaaatgtataagtgaaagagagaggaaaatggttttgagtgcccttatcaactattgatgtattcttcttt 32231428  T
Q  179 atcataaat 187  Q
    |||||||||    
T  32231429 atcataaat 32231437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 87 - 284
Target Start/End: Complemental strand, 5392205 - 5392007
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataa 185  Q
    |||||||||||| |||||||| ||  ||||| | |||| ||||||||||||||| ||  |||||  || |||| |||||||||||||||   ||||||||    
T  5392205 ctcatttcacacctattaagacaaa-tgtataaatgaaggagagagaaaaatggttttaagtgcttttgtcaagtattggtgcattctccactatcataa 5392107  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttat-aattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    || |||||| ||||||||||||||| ||||| |||||||| |||||||||  ||||| ||  |       ||||||||||||||||||||||||||||||    
T  5392106 atgcaaagtggaatatattgaattgggagtgttgaaagtagtattaattagagttataaagggaaaaaaagtaattaatattgtattgaaaagtgaaatg 5392007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 145 - 287
Target Start/End: Complemental strand, 32679134 - 32678991
Alignment:
Q  145 gagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttata 243  Q
    ||||||| || |||| |||||||||||| | |||||||||||||  |||||| |||||||| |||||||||| || |||||| |||||||||  ||||||    
T  32679134 gagtgcctttttcaagtattggtgcattattctttatcataaatgtaaagtaaaatatattaaattgagagttgtaaaagtagtattaattagagttata 32679035  T
Q  244 attgnnnnnnngtaattaatattgtattgaaaagtgaaatgggt 287  Q
    ||||       ||||||||| |||||||||||||||||||||||    
T  32679034 attgaaaaaaggtaattaatgttgtattgaaaagtgaaatgggt 32678991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 342
Target Start/End: Original strand, 10728885 - 10729132
Alignment:
Q  101 attaagaaaaggtgtatgagtgaaagagagagaaaaa--tgggttagagtgcccttatcaactattggtgcattctct-ttatcataaattcaaagtaga 197  Q
    |||||||||| |||||| ||||||||||||| |||||  | | || ||||| | || | || |||| ||||||||| | ||||||||||| |||||| ||    
T  10728885 attaagaaaaagtgtataagtgaaagagagaaaaaaaaatagttttgagtgtc-ttgttaagtatttgtgcattctttcttatcataaatgcaaagtgga 10728983  T
Q  198 atatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaatt----- 292  Q
    ||||||||||||| ||||| | |||||| |||||||||  |||| |||||       ||||||| | ||  ||||||||||||||||||||||||         
T  10728984 atatattgaattgggagtgattaaagtagtattaattagagttacaattggaaaaatgtaattattgtttaattgaaaagtgaaatgggtcaattttttg 10729083  T
Q  293 ggacaatatttttgtgaaaatggctcagttattatgggactgagagagta 342  Q
    ||||||||||||| || ||||| ||||||||||||||||| ||| |||||    
T  10729084 ggacaatattttt-tgcaaatgactcagttattatgggacggagggagta 10729132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 88 - 343
Target Start/End: Original strand, 2875040 - 2875299
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaa 186  Q
    ||||||||||  ||||||||||||||| || ||||||||| |||||||||||| | || ||    || |||  ||||| | |||||| | ||||||||||    
T  2875040 tcatttcacaactattaagaaaaggtgaataagtgaaagaaagagaaaaatggttcagtgtt---ttgtcatttattgatacattcttccttatcataaa 2875136  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatggg 286  Q
    | ||||||||||||||||||||| ||||   |||||||| |||||||||  ||||||||||        ||||| ||||||||||||||||||||| |||    
T  2875137 tgcaaagtagaatatattgaatttagaggaatgaaagtagtattaattagagttataattggtaaaaaataattcatattgtattgaaaagtgaaacggg 2875236  T
Q  287 tcaa------ttggacaatatttttgtgaaaatggctcagttattatgggactgagagagtat 343  Q
    | ||       || ||||||||||| || |||||||||  |||||||||||| ||| ||||||    
T  2875237 taaagtttttctgaacaatatttttttgcaaatggctcgcttattatgggacggagggagtat 2875299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 1230387 - 1230473
Alignment:
Q  161 tattggtgcattctctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    ||||||||||||  | ||||||||||| |||||||||||||||||||||||||||| || || ||||||||||||| ||||||||||    
T  1230387 tattggtgcatttccattatcataaatgcaaagtagaatatattgaattgagagtgatggaaataatattaattaaagttataattg 1230473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 289
Target Start/End: Original strand, 27868276 - 27868478
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataa 185  Q
    ||||||||||||||||||||||||  ||||| |||||| ||  ||||||||||| ||   |||  ||| |||| ||||| | ||||  || |||||||||    
T  27868276 ctcatttcacacttattaagaaaaa-tgtattagtgaatgatggagaaaaatggttttacgtgttcttgtcaagtattgatccatttatcattatcataa 27868374  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgg 285  Q
    || ||||||||||||||||||||||||| || |||||||| ||||||||||  |||||||||       |||||||||||| |||| ||||  ||||| |    
T  27868375 atgcaaagtagaatatattgaattgagaatgatgaaagtagtattaattaaaattataattgaaaaaaagtaattaatattatattaaaaaacgaaatag 27868474  T
Q  286 gtca 289  Q
    ||||    
T  27868475 gtca 27868478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 155 - 285
Target Start/End: Complemental strand, 37459439 - 37459308
Alignment:
Q  155 atcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnn 253  Q
    ||||||||||| || ||||| ||||||||||||| |||||| ||||||||| ||||| |||||||||||||| ||| ||||| | ||||||||           
T  37459439 atcaactattgatgtattcttctttatcataaatgcaaagttgaatatattaaattgggagtggtgaaagtagtatcaattagtattataattagaaaaa 37459340  T
Q  254 ngtaattaatattgtattgaaaagtgaaatgg 285  Q
     ||||||||||||||||| |||||||||||||    
T  37459339 agtaattaatattgtattaaaaagtgaaatgg 37459308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 247
Target Start/End: Original strand, 7258321 - 7258478
Alignment:
Q  90 atttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataaatt 188  Q
    |||||||||||||||| ||||  | ||| | |||| || |||||||||||| ||  || || ||| |||| ||||||||||||  || |||||||||||     
T  7258321 atttcacacttattaaaaaaaa-tatattaatgaaggaaagagaaaaatggttttaagcgctcttgtcaagtattggtgcatttatcattatcataaatg 7258419  T
Q  189 caaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    |||| ||||||||||||||||| ||||| |||||||| |||||||||  ||||||||||    
T  7258420 caaactagaatatattgaattgggagtgatgaaagtagtattaattagagttataattg 7258478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 85 - 209
Target Start/End: Original strand, 9734117 - 9734240
Alignment:
Q  85 gactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcat 183  Q
    ||||||||||||| ||||||| ||||  ||||| | ||||||||  |||||||||| || ||||   |||||||||||||||||||||| ||||||||||    
T  9734117 gactcatttcacatttattaaaaaaaaatgtataaatgaaagag--agaaaaatggatttgagtattcttatcaactattggtgcattcttctttatcat 9734214  T
Q  184 aaattcaaagtagaatatattgaatt 209  Q
    |||| ||||||| |||||||| ||||    
T  9734215 aaatgcaaagtaaaatatattaaatt 9734240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 174 - 292
Target Start/End: Complemental strand, 11637209 - 11637090
Alignment:
Q  174 tctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt-gnnnnnnngtaattaatattgtattg 272  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||  |||||| ||         ||||||||||||||||||    
T  11637209 tctttatcataaatgtaaagtagaatatattgaattgagagtggtgaaagtagtattaattatagttatatttaaaaaaagagtaattaatattgtattg 11637110  T
Q  273 aaaagtgaaatgggtcaatt 292  Q
    |||| | |||||| ||||||    
T  11637109 aaaaataaaatggatcaatt 11637090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 182 - 284
Target Start/End: Original strand, 44615411 - 44615513
Alignment:
Q  182 ataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaa 281  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||  |||||||  |       |||||||||||||||||| ||||||||    
T  44615411 ataaatgcaaagtagaatatattgaattgagagtgatgaaaataatattaattagagttataaagggggaaaagtaattaatattgtattggaaagtgaa 44615510  T
Q  282 atg 284  Q
    |||    
T  44615511 atg 44615513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 292
Target Start/End: Complemental strand, 8618211 - 8618079
Alignment:
Q  161 tattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaat 259  Q
    |||||||||||| | |||||||||||||  ||| || ||||||||||||||  |||||| ||| || |||||||||| ||||||||||       |||||    
T  8618211 tattggtgcattattctttatcataaatgtaaaatataatatattgaattggaagtggtaaaaatagtattaattaaagttataattggataaaagtaat 8618112  T
Q  260 taatattgtattgaaaagtgaaatgggtcaatt 292  Q
    |||||| |||||| |||||||||| ||||||||    
T  8618111 taatatagtattggaaagtgaaattggtcaatt 8618079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 174 - 292
Target Start/End: Original strand, 8418340 - 8418461
Alignment:
Q  174 tctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaa---tattgtat 270  Q
    ||||||||||||||  ||||||||||||| ||||||||||||| |||||||| |||||||||  ||||||||||        |||||||   |||| |||    
T  8418340 tctttatcataaatgtaaagtagaatatactgaattgagagtgatgaaagtagtattaattagagttataattgaaaaaaaataattaatactattatat 8418439  T
Q  271 tgaaaagtgaaatgggtcaatt 292  Q
    |||||||||||||| |||||||    
T  8418440 tgaaaagtgaaatgagtcaatt 8418461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 152 - 290
Target Start/End: Original strand, 38201406 - 38201544
Alignment:
Q  152 cttatcaactattggtgcattc-tctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnn 250  Q
    |||||||| |||| |||||||| | |||||||||||| |||| |||| |||||||||||| ||||  ||||||||||||||||||  ||||||| ||       
T  38201406 cttatcaaatatttgtgcattcatttttatcataaatgcaaattagagtatattgaattgggagtaatgaaagtaatattaattagagttataaatgaaa 38201505  T
Q  251 nnnngtaattaatattgtattgaaaagtgaaatgggtcaa 290  Q
         |||||| |||||||||||||||||||||| |||||    
T  38201506 aaaa-taattattattgtattgaaaagtgaaatgagtcaa 38201544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 284
Target Start/End: Original strand, 4274341 - 4274447
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    |||||||||| ||||||  |||||||||||||||||||||||||| ||||||||||||  ||||||| ||       |||||||||  ||||||||||||    
T  4274341 tatcataaatgcaaagtgaaatatattgaattgagagtggtgaaaataatattaattagagttataaatgaaaaaaagtaattaatgatgtattgaaaag 4274440  T
Q  278 tgaaatg 284  Q
     ||||||    
T  4274441 cgaaatg 4274447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 284
Target Start/End: Original strand, 32967228 - 32967425
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataa 185  Q
    |||||||||||| ||||||| |||  ||||| | ||||  |||||||||||| | ||  ||||| ||| | || ||||||| |||||||   ||||||||    
T  32967228 ctcatttcacacgtattaagtaaaa-tgtataaatgaagaagagagaaaaatagttttaagtgcacttcttaagtattggtccattctccactatcataa 32967326  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    ||| ||||| |||||||||||||||||| || |||||||| |||||||||  |||||||  |       |||| ||||| |||||||||||||||||||    
T  32967327 atttaaagtggaatatattgaattgagaatgatgaaagtagtattaattagagttataaaggaaaaaaagtaactaatactgtattgaaaagtgaaatg 32967425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 88 - 244
Target Start/End: Original strand, 44790374 - 44790530
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataaa 186  Q
    ||||||||||| |||||||| ||  ||||| | |||| ||||||||||||| | ||  ||||| ||| | || |||||||||||||||   |||||||||    
T  44790374 tcatttcacacgtattaagacaaa-tgtataaatgaaggagagagaaaaatagttttaagtgcacttgttaagtattggtgcattctccactatcataaa 44790472  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |  ||||| ||||||||||||||| || ||||||||||| |||||||||  |||||||    
T  44790473 tgtaaagtggaatatattgaattgggaatggtgaaagtagtattaattagagttataa 44790530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 283
Target Start/End: Complemental strand, 3384599 - 3384492
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaat---attaattaatgttataattgnnnnnnngtaattaatattgtattgaa 274  Q
    |||||||||| |||||| |||||||||||||||| |||| ||||||||||   ||||||||| ||||||||||       ||||||||||||||||| ||    
T  3384599 tatcataaatgcaaagttgaatatattgaattgaaagtgatgaaagtaatattattaattaaagttataattg-aaaaaagtaattaatattgtattaaa 3384501  T
Q  275 aagtgaaat 283  Q
    |||||||||    
T  3384500 aagtgaaat 3384492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 245
Target Start/End: Complemental strand, 26677227 - 26677067
Alignment:
Q  90 atttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttaga-gtgcccttatcaactattggtgcattctct-ttatcataaat 187  Q
    ||||||||| |||||||||||  ||||| ||||||||||||||||||||  |||  | ||| | || | || ||||||||||||| |  |||||||||||    
T  26677227 atttcacacatattaagaaaaa-tgtataagtgaaagagagagaaaaatttgttttaagtgtcattgtaaaatattggtgcattcaccattatcataaat 26677129  T
Q  188 tcaaagtagaatatat----tgaattgagagtggtgaaagtaatattaattaatgttataat 245  Q
     |||||||||||||||    |||||| |||||| ||||| ||||||||||||| ||||||||    
T  26677128 gcaaagtagaatatataaattgaattaagagtgatgaaattaatattaattaaagttataat 26677067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 283
Target Start/End: Original strand, 32241466 - 32241571
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    |||||||||| |||||| ||||||| |||||||  ||| |||||||||||||||||||  |||||||  |       |||||||||||||||||||||||    
T  32241466 tatcataaatgcaaagtggaatataatgaattggaagttgtgaaagtaatattaattagagttataaagggaaaaaagtaattaatattgtattgaaaag 32241565  T
Q  278 tgaaat 283  Q
    ||||||    
T  32241566 tgaaat 32241571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 284
Target Start/End: Original strand, 31410650 - 31410756
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    |||||||||| |||||| |||||||||||||| |||||  |||||||| |||||||||| ||||||   |       |||||||||||||||||| ||||    
T  31410650 tatcataaatgcaaagtggaatatattgaattaagagtaatgaaagtagtattaattaaagttatagaagggaaaaagtaattaatattgtattggaaag 31410749  T
Q  278 tgaaatg 284  Q
    |||||||    
T  31410750 tgaaatg 31410756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 244
Target Start/End: Complemental strand, 28802890 - 28802766
Alignment:
Q  121 tgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtg 219  Q
    |||||||||||||||||||| ||  ||||| ||| | || ||||| |  ||||||   |||||||||| |||||| ||||||||||||||||||||| ||    
T  28802890 tgaaagagagagaaaaatggttttaagtgctcttgttaagtattgatctattctccactatcataaatgcaaagtggaatatattgaattgagagtgatg 28802791  T
Q  220 aaagtaatattaattaatgttataa 244  Q
    ||| || |||||||||  |||||||    
T  28802790 aaaatattattaattagagttataa 28802766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 225
Target Start/End: Complemental strand, 17006014 - 17005963
Alignment:
Q  174 tctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagta 225  Q
    |||||||||||||| |||||||||||||||||||||| ||||| ||||||||    
T  17006014 tctttatcataaatgcaaagtagaatatattgaattgggagtgatgaaagta 17005963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 17571234 - 17571285
Alignment:
Q  174 tctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagta 225  Q
    |||||||||||||| |||||||||||||||||||||| ||||| ||||||||    
T  17571234 tctttatcataaatgcaaagtagaatatattgaattgggagtgatgaaagta 17571285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 292
Target Start/End: Complemental strand, 33826297 - 33826186
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaa 276  Q
    |||||||||||  |||| ||||||||||||||||||| || |||||||| |||| ||||  ||||||||||         ||||||||||||||||||||    
T  33826297 ttatcataaatgtaaagcagaatatattgaattgagaatgatgaaagtagtattgattagagttataattgaaaaa----aattaatattgtattgaaaa 33826202  T
Q  277 gtgaaatgggtcaatt 292  Q
    |||||||  |||||||    
T  33826201 gtgaaataagtcaatt 33826186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 285
Target Start/End: Complemental strand, 45197657 - 45197569
Alignment:
Q  197 aatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgg 285  Q
    |||||||||||||||||||| ||||| || |||||||||  | |||||||        |||||||||||||||||||||||||||||||    
T  45197657 aatatattgaattgagagtgatgaaattactattaattagagctataatttaataaaagtaattaatattgtattgaaaagtgaaatgg 45197569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 245
Target Start/End: Original strand, 15559086 - 15559239
Alignment:
Q  92 ttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaattca 190  Q
    |||||| ||||||||||||  ||||| |||||| |||||| |||||||  ||  ||||  ||| |||| |||||||| |||  |  ||||||||||| ||    
T  15559086 ttcacatttattaagaaaaa-tgtattagtgaaggagagacaaaaatgattttaagtgttcttgtcaagtattggtgtatttaccattatcataaatgca 15559184  T
Q  191 aagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataat 245  Q
    |||||||||||||||||||  ||||| |||||||  |||||||||  ||||||||    
T  15559185 aagtagaatatattgaattaggagtgatgaaagtggtattaattagagttataat 15559239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 44225945 - 44226031
Alignment:
Q  161 tattggtgcattctcttt-atcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    |||||||||||||  ||| ||||||||| |||||||||||||||| ||| ||||| | ||||| ||||||||||||  |||||||||    
T  44225945 tattggtgcattcattttcatcataaatgcaaagtagaatatattaaatagagagcgatgaaaataatattaattagagttataatt 44226031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 235
Target Start/End: Original strand, 5423146 - 5423263
Alignment:
Q  119 agtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaattcaaagtagaatatattgaattgagagtgg 217  Q
    |||||||||||||||||||||  || ||||| |||| ||||  ||||||| |||  |  ||||||||||| |||||| ||| |||||||||||||| ||     
T  5423146 agtgaaagagagagaaaaatgattttgagtgtccttgtcaagcattggtgtatttaccattatcataaatacaaagtggaagatattgaattgagaatga 5423245  T
Q  218 tgaaagtaatattaatta 235  Q
    | |||||| |||||||||    
T  5423246 taaaagtagtattaatta 5423263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 222
Target Start/End: Original strand, 5878215 - 5878312
Alignment:
Q  125 agagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctttatcataaattcaaagtagaatatattgaattgagagtggtgaaa 222  Q
    |||||||||||||||| ||  | || | || |||| |||| || ||||||  |||||||||||  |||||||||||||||||||||||||| ||||||    
T  5878215 agagagagaaaaatggttttaaatgtctttgtcaagtattagttcattctacttatcataaatgtaaagtagaatatattgaattgagagttgtgaaa 5878312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 282
Target Start/End: Original strand, 5962497 - 5962619
Alignment:
Q  161 tattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaat 259  Q
    |||||||||||||||   ||| |||||| |||||| ||||||||||||||| ||||| ||||| ||||||||||||  |||||||  |       |||||    
T  5962497 tattggtgcattctccactattataaatgcaaagtggaatatattgaattgggagtgatgaaattaatattaattagagttataaaggggaaaaagtaat 5962596  T
Q  260 taatattgtattgaaaagtgaaa 282  Q
    ||||| ||||||| |||||||||    
T  5962597 taataatgtattggaaagtgaaa 5962619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 284
Target Start/End: Original strand, 33190951 - 33191057
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    |||||||||| || ||| |||||||||||||||  ||| ||||||||| || ||||||  |||||||  |       |||||||||||||||||||||||    
T  33190951 tatcataaatgcatagtggaatatattgaattggaagttgtgaaagtagtactaattagagttataaagggaaaaaagtaattaatattgtattgaaaag 33191050  T
Q  278 tgaaatg 284  Q
    |||||||    
T  33191051 tgaaatg 33191057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 42558623 - 42558680
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    |||||||||| |||||| |||||||||||||| |||||| |||||||| |||||||||    
T  42558623 tatcataaatgcaaagtggaatatattgaattaagagtgatgaaagtagtattaatta 42558680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 8566526 - 8566562
Alignment:
Q  256 taattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    |||||||||||||||||||||||||||||||||||||    
T  8566526 taattaatattgtattgaaaagtgaaatgggtcaatt 8566562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 332
Target Start/End: Original strand, 9734477 - 9734560
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggac 332  Q
    ||||||||||||||||| ||||||||||||||||||||       ||||||| |||| || |||||||||| ||||||||||||    
T  9734477 gtaattaatattgtattaaaaagtgaaatgggtcaatttttctaagacaatacttttttgcaaatggctcatttattatgggac 9734560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 177 - 331
Target Start/End: Complemental strand, 15020738 - 15020579
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaa 276  Q
    |||||||| || ||||||||||||||||||||||  |||| ||||| || |||||||||  ||| |||| |       | ||||| |||||||||| |||    
T  15020738 ttatcatacatgcaaagtagaatatattgaattggtagtgatgaaattattattaattatagttgtaatcggtaaaaagcaattattattgtattg-aaa 15020640  T
Q  277 gtgaaatgggtcaa------ttggacaatatttttgtgaaaatggctcagttattatggga 331  Q
    ||||||||| ||||      ||||||||||||||| || ||||| |||| |||||||||||    
T  15020639 gtgaaatggatcaattttttttggacaatatttttttgcaaatgactcacttattatggga 15020579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 17790110 - 17790174
Alignment:
Q  176 tttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgtt 240  Q
    ||||||||||||  ||||||||||||||||| |||  |||||||||| |||||||||||| ||||    
T  17790110 tttatcataaatataaagtagaatatattgatttggaagtggtgaaaataatattaattagtgtt 17790174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 199 - 284
Target Start/End: Original strand, 36012035 - 36012120
Alignment:
Q  199 tatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    |||||||||||| ||| |||||||||| |||||||||  ||||||| ||        |||||||||||||||||||||||||||||    
T  36012035 tatattgaattgtgagcggtgaaagtagtattaattagagttataagtggaaaaaaataattaatattgtattgaaaagtgaaatg 36012120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 233
Target Start/End: Complemental strand, 12653843 - 12653697
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataa 185  Q
    |||||||||||| |||||||||||  ||||| | ||||  |||||||||||| | ||  |||||  || | || |||||||||||| ||   ||| ||||    
T  12653843 ctcatttcacacgtattaagaaaaa-tgtataaatgaagtagagagaaaaatagttttaagtgcgtttgttaaatattggtgcattatccactattataa 12653745  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaat 233  Q
    ||  ||||| |||||||||||||||||| || ||||||||||||||||    
T  12653744 atgtaaagtggaatatattgaattgagaatgatgaaagtaatattaat 12653697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 23765049 - 23764962
Alignment:
Q  161 tattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    |||||||||| ||| |||||||||||||  |||||| |||||||||||||||||||| |||||  | || ||| ||| ||||||||||    
T  23765049 tattggtgcactcttctttatcataaatgtaaagtaaaatatattgaattgagagtgatgaaataagtactaactaaagttataattg 23764962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 292
Target Start/End: Complemental strand, 29451415 - 29451299
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt-gnnnnnnngtaattaatattgtattgaaa 275  Q
    ||||||||||| ||||||| |||||||||||||||| ||| |||||||| || ||||||   |||||||| |        |||||| | |||||||||||    
T  29451415 ttatcataaatccaaagtataatatattgaattgagggtgatgaaagtagtactaattagatttataattagaaaaaaaataattattgttgtattgaaa 29451316  T
Q  276 agtgaaatgggtcaatt 292  Q
    | |||||||||||||||    
T  29451315 aatgaaatgggtcaatt 29451299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 284
Target Start/End: Complemental strand, 29615861 - 29615757
Alignment:
Q  180 tcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtg 279  Q
    ||||||||  ||||| ||||||||||||||| || || |||||||| |||||||||| |||||||  |        |||||||||||||||||||||||     
T  29615861 tcataaatgtaaagtggaatatattgaattgggaatgatgaaagtagtattaattaaagttataaagggaaaaaaataattaatattgtattgaaaagta 29615762  T
Q  280 aaatg 284  Q
    |||||    
T  29615761 aaatg 29615757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 216
Target Start/End: Original strand, 325110 - 325196
Alignment:
Q  131 agaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaattcaaagtagaatatattgaattgagagtg 216  Q
    |||||||||| || || |||| || |||| ||||||||||||| |  |||||||||||  ||||| |||||||||||||||||||||    
T  325110 agaaaaatggttttgattgcctttgtcaagtattggtgcattcaccgttatcataaatataaagtggaatatattgaattgagagtg 325196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 244
Target Start/End: Original strand, 33925130 - 33925192
Alignment:
Q  182 ataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||| |||||| |||||||||||||||| ||| ||||||||| |||||||||  |||||||    
T  33925130 ataaatgcaaagtggaatatattgaattgaaagttgtgaaagtagtattaattagagttataa 33925192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 39171608 - 39171542
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||||| |||||| ||||||||||||||| ||||| ||||| || |||||||||  |||||||    
T  39171608 tatcataaatgcaaagtggaatatattgaattgtgagtgatgaaaatagtattaattagagttataa 39171542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 18725975 - 18725910
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttat 242  Q
    |||| ||||||  ||||||||||||||| |||| |||||  ||||||||||||||||||| |||||    
T  18725975 ttattataaatgtaaagtagaatatatttaattaagagtaatgaaagtaatattaattaaagttat 18725910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 27987724 - 27987655
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    ||||||||||| |||| |  |||||||||||||| ||||| |||||||| |||||||||  |||||||||    
T  27987724 ttatcataaatgcaaaatgaaatatattgaattgtgagtgatgaaagtagtattaattatagttataatt 27987655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 28045026 - 28044957
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    ||||||||||| |||| |  |||||||||||||| ||||| |||||||| |||||||||  |||||||||    
T  28045026 ttatcataaatgcaaaatgaaatatattgaattgtgagtgatgaaagtagtattaattatagttataatt 28044957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 29567271 - 29567202
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    ||||||||||| ||||||| ||||||||| ||| |||||  |||||||| ||||||||||  ||||||||    
T  29567271 ttatcataaatacaaagtaaaatatattgcattaagagttatgaaagtagtattaattaaatttataatt 29567202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 283
Target Start/End: Original strand, 44975775 - 44975896
Alignment:
Q  165 ggtgcattc-tctttatcataaattcaaagtagaatat--attgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaatta 261  Q
    ||||||||| |||||||| |||||  || |||||||||  ||||||||||| ||| |||||||| |||||||||  ||||||||||        ||||||    
T  44975775 ggtgcattcctctttatcgtaaatgtaatgtagaatatgtattgaattgagcgtgatgaaagtagtattaattagagttataattgcaaaaaattaatta 44975874  T
Q  262 atattgtattgaaaagtgaaat 283  Q
    |||||||  |||||||||||||    
T  44975875 atattgtgctgaaaagtgaaat 44975896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 284
Target Start/End: Original strand, 13084972 - 13085099
Alignment:
Q  161 tattggtgcattctcttta-tcataaattcaaagtagaatatattgaattgagag---tggtgaaagtaatattaattaatgttataattgnnnnnnngt 256  Q
    ||||||||||||||||  | |||||||| |||||| |||||||| ||| || |||   || ||||| ||| ||||||||  |||||| |||       ||    
T  13084972 tattggtgcattctctacaatcataaatgcaaagtggaatatatcgaactgggaggagtgatgaaaataacattaattagagttatatttggaaaaaggt 13085071  T
Q  257 aattaatattgtattgaaaagtgaaatg 284  Q
    ||||||||||||||||||||||||||||    
T  13085072 aattaatattgtattgaaaagtgaaatg 13085099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 18733451 - 18733392
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaa 236  Q
    |||| |||||| |||||||||||||||| |||| |||||  | |||||||||||||||||    
T  18733451 ttattataaatgcaaagtagaatatatttaattaagagtaattaaagtaatattaattaa 18733392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 22490456 - 22490390
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||||| |||||| |||||||||||||||||| || ||| |||  |||||||||  |||||||    
T  22490456 tatcataaatacaaagtggaatatattgaattgagaatgatgatagttgtattaattagagttataa 22490390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 292
Target Start/End: Original strand, 43844860 - 43845040
Alignment:
Q  113 tgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattga 211  Q
    ||||| ||| |||||||||||||||||| || |||  || || |||| |||||||  | ||| |||||||||||||  |||||| |||||| | |||||     
T  43844860 tgtataagtaaaagagagagaaaaatggttttgaga-cctttgtcaagtattggtatactcttctttatcataaatgtaaagtaaaatataattaattg- 43844957  T
Q  212 gagtggtgaaagtaatattaattaatgttataattgnnnnnnn--gtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    |||| || ||||||  ||||||||  ||||||||||         |||||||||||||||||||||||||| ||| |||||||    
T  43844958 gagttgttaaagtagaattaattagagttataattggaaaaaaaagtaattaatattgtattgaaaagtgatatgagtcaatt 43845040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 45425550 - 45425484
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||||| |||||| ||||||||| ||||  || || ||||||||||||||||||  |||||||    
T  45425550 tatcataaatgcaaagtggaatatattaaattaggaatgatgaaagtaatattaattagagttataa 45425484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 7042835 - 7042754
Alignment:
Q  161 tattggtgcattctct-ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgtta 241  Q
    |||||||||||||||| |||||||||||  ||||| ||||||||  |||||  |||| ||||| || |||||||||| ||||    
T  7042835 tattggtgcattctctattatcataaatgtaaagtggaatatataaaattggaagtgatgaaaatagtattaattaaagtta 7042754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 284
Target Start/End: Original strand, 26570278 - 26570307
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatg 284  Q
    ||||||||||||||||||||||||||||||    
T  26570278 gtaattaatattgtattgaaaagtgaaatg 26570307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 246
Target Start/End: Original strand, 27875183 - 27875252
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    ||||||||||| ||||||| |||| ||||||||| || ||  |||| || |||||||||| |||||||||    
T  27875183 ttatcataaatgcaaagtataatacattgaattgggaatgtcgaaaatagtattaattaaagttataatt 27875252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 284
Target Start/End: Original strand, 138809 - 138837
Alignment:
Q  256 taattaatattgtattgaaaagtgaaatg 284  Q
    |||||||||||||||||||||||||||||    
T  138809 taattaatattgtattgaaaagtgaaatg 138837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 284
Target Start/End: Complemental strand, 139020 - 138992
Alignment:
Q  256 taattaatattgtattgaaaagtgaaatg 284  Q
    |||||||||||||||||||||||||||||    
T  139020 taattaatattgtattgaaaagtgaaatg 138992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 284
Target Start/End: Original strand, 22325075 - 22325103
Alignment:
Q  256 taattaatattgtattgaaaagtgaaatg 284  Q
    |||||||||||||||||||||||||||||    
T  22325075 taattaatattgtattgaaaagtgaaatg 22325103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 291
Target Start/End: Original strand, 23550980 - 23551016
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaat 291  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  23550980 gtaattaatgttgtattgaaaagtaaaatgggtcaat 23551016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 284
Target Start/End: Original strand, 29730988 - 29731016
Alignment:
Q  256 taattaatattgtattgaaaagtgaaatg 284  Q
    |||||||||||||||||||||||||||||    
T  29730988 taattaatattgtattgaaaagtgaaatg 29731016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 139
Target Start/End: Complemental strand, 37459497 - 37459446
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatg 139  Q
    |||||||||||||||||||||||| |||||| | ||||| ||||| |||||||    
T  37459497 ctcatttcacacttattaagaaaa-gtgtataaatgaaaaagagaaaaaaatg 37459446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 150; Significance: 3e-79; HSPs: 114)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 80 - 342
Target Start/End: Original strand, 29756086 - 29756358
Alignment:
Q  80 cccttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tcttt 178  Q
    |||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  29756086 cccttggctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgggtttgagtgcccttatcaactattggtgcattcttcttt 29756185  T
Q  179 atcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg--nnnnnnngtaattaatattgtattgaaaa 276  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||         ||||||||||||||||||||||    
T  29756186 atcataaatgcaaagtagaatatattgaattgggagtggtgaaagtagtattaattagtgttataattggaaaaaaaagtaattaatattgtattgaaaa 29756285  T
Q  277 gtgaaatgggtcaatt------ggacaata-tttttgtgaaaatggctcagttattatgggactgagagagta 342  Q
    ||||||||||||||||      |||||||| ||||| || ||||||||| ||||||||||||| ||| |||||    
T  29756286 gtgaaatgggtcaatttttctaggacaatattttttttgcaaatggctctgttattatgggacggagggagta 29756358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 79 - 332
Target Start/End: Complemental strand, 26583893 - 26583633
Alignment:
Q  79 acccttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctt 177  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||| ||||    
T  26583893 acccttgactcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatgagtttgagtgcctttatcaactattggtgcattcttctt 26583794  T
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    |||||||||| |||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||       |||||||||||||||||||||||    
T  26583793 tatcataaatgcaaaatagaatatattgaattgggagtgatgaaaatattattaattagtgttataattggaataaagtaattaatattgtattgaaaag 26583694  T
Q  278 tgaaatgggtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggac 332  Q
    |||||||||||||||       |||||||||||| || |||| ||||||||||||||||||    
T  26583693 tgaaatgggtcaatttttttgagacaatatttttttgcaaatagctcagttattatgggac 26583633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 136 - 343
Target Start/End: Complemental strand, 2886279 - 2886065
Alignment:
Q  136 aatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatt 234  Q
    |||||||| ||||| |||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  2886279 aatgggttcgagtggccttatcaactattggagcattcttctttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagtagtattaatt 2886180  T
Q  235 aatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaatt------ggacaatatttttgtgaaaatggctcagttattatg 328  Q
    | |||||||||||       ||||||||||||||||||||||||||||| | ||||||      ||||||||||||| || ||||| |||||||||||||    
T  2886179 agtgttataattggaaaaaagtaattaatattgtattgaaaagtgaaattgatcaatttttctgggacaatatttttttgcaaatgactcagttattatg 2886080  T
Q  329 ggactgagagagtat 343  Q
    |||| ||| ||||||    
T  2886079 ggacggagggagtat 2886065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 83 - 292
Target Start/End: Original strand, 24131349 - 24131557
Alignment:
Q  83 ttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatc 181  Q
    |||||||||||||||||||||||||||| | |||| |||||||||||||  ||||||| || || |||||||||||||||| |||||||||| |||||||    
T  24131349 ttgactcatttcacacttattaagaaaaagcgtataagtgaaagagaga--aaaatggttttgaatgcccttatcaactataggtgcattcttctttatc 24131446  T
Q  182 ataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaa 281  Q
    |||||| ||||||| |||||||||||||| |||||||||||||| ||||||||| |||||||||||       ||||||||||||| |||||||||||||    
T  24131447 ataaatgcaaagtataatatattgaattgggagtggtgaaagtagtattaattagtgttataattggaaaaaagtaattaatattgcattgaaaagtgaa 24131546  T
Q  282 atgggtcaatt 292  Q
    ||  |||||||    
T  24131547 ataagtcaatt 24131557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 82 - 292
Target Start/End: Original strand, 37925188 - 37925403
Alignment:
Q  82 cttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagaga----aaaatgggttagagtgcccttatcaactattggtgcattct-ct 176  Q
    |||| ||||||| |||||||||||||||| |||||| |||||||||||||||    ||||||  ||  ||||| |||||||| |||||||||||| | ||    
T  37925188 cttggctcatttaacacttattaagaaaaagtgtataagtgaaagagagagagagaaaaatgatttttagtgctcttatcaattattggtgcatttttct 37925287  T
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaa 276  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||       ||||||||||||||||||||||    
T  37925288 ttatcataaatgcaaagtagaatatattgaattgagagtggtgaaagtaatattaattagtgttataattgaaaaaaagtaattaatattgtattgaaaa 37925387  T
Q  277 gtgaaatgggtcaatt 292  Q
    || |||| ||||||||    
T  37925388 gtaaaattggtcaatt 37925403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 82 - 228
Target Start/End: Original strand, 26924066 - 26924213
Alignment:
Q  82 cttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttat 180  Q
    |||| |||||||||||||||||||||||| |||||  ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||    
T  26924066 cttggctcatttcacacttattaagaaaaagtgtaaaagtgaaagagagagaaaaatgagtttgagtgcccttatcaactattggtgcattcttctttat 26924165  T
Q  181 cataaattcaaagtagaatatattgaattgagagtggtgaaagtaata 228  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  26924166 cataaatgcaaagtataatatattgaattgagagtggtgaaagtaata 26924213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 83 - 332
Target Start/End: Original strand, 37541060 - 37541320
Alignment:
Q  83 ttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatc 181  Q
    |||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||| || || || | ||||||||||||||||||||| |||||||     
T  37541060 ttgattcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatggttttgaatgtctttatcaactattggtgcattcttctttatt 37541159  T
Q  182 ataaattcaaagtagaatatattgaattgagagtggtgaaagta--atattaattaatgttataattg--nnnnnnngtaattaatattgtattgaaaag 277  Q
    ||||||  |||||||||||||||||||||  |||||||||||||  ||||||||||||||||||||||         |||||||||||||||||||||||    
T  37541160 ataaatgtaaagtagaatatattgaattggaagtggtgaaagtagtatattaattaatgttataattggaaaaagtagtaattaatattgtattgaaaag 37541259  T
Q  278 tgaaatgggtcaat-----tg-gacaatatttttgtgaaaatggctcagttattatgggac 332  Q
    ||||||   |||||     || |||||||||||| || ||||| |||||||||||||||||    
T  37541260 tgaaataaatcaatctttctgagacaatatttttttgcaaatgactcagttattatgggac 37541320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 127 - 329
Target Start/End: Complemental strand, 31798535 - 31798325
Alignment:
Q  127 agagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagta 225  Q
    ||||||||| |||| || |||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  31798535 agagagaaatatggttttgagtgcccttatcaactattggtgcattattctttatcataaatgcaaagtagaatatattgaattgagagtagtgaaagta 31798436  T
Q  226 atattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaatt------ggacaata-tttttgtgaaaatggctc 318  Q
    |||||||||| |||||||||||       |||||||||||| |||||||||||||||| ||||||||      |||||||| ||||| || ||||| |||    
T  31798435 atattaattagtgttataattggaaaaaagtaattaatattatattgaaaagtgaaataggtcaattttcccgggacaatattttttttgcaaatgactc 31798336  T
Q  319 agttattatgg 329  Q
    |||||||||||    
T  31798335 agttattatgg 31798325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 86 - 282
Target Start/End: Original strand, 46363360 - 46363558
Alignment:
Q  86 actcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgccctt-atcaactattggtgcattct-ctttatcat 183  Q
    ||||||||||||||||||||||||| |||||| ||||| ||||||||| ||||| ||| |||||| ||| |||||||||||||||||||| |||||||||    
T  46363360 actcatttcacacttattaagaaaaagtgtataagtgagagagagagagaaatgtgtttgagtgcactttatcaactattggtgcattcttctttatcat 46363459  T
Q  184 aaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaa 282  Q
    |||| ||||||| ||||||||||||||||||||||| ||||| ||||||||| |||||||||||         |||||||||| |||||||||||||||    
T  46363460 aaatgcaaagtaaaatatattgaattgagagtggtggaagtagtattaattattgttataattggaagaaaaaaattaatattatattgaaaagtgaaa 46363558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 82 - 233
Target Start/End: Original strand, 40754360 - 40754511
Alignment:
Q  82 cttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaac-tattggtgcattct-cttta 179  Q
    |||||||||||||| |||||||||||||| |||||| |||||||||||||||||  ||| || |||||||||||||||| |||||||||||||| |||||    
T  40754360 cttgactcatttcatacttattaagaaaaagtgtataagtgaaagagagagaaa--tggttttgagtgcccttatcaacctattggtgcattcttcttta 40754457  T
Q  180 tcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaat 233  Q
    |||||||| |||||||||||||||| |||||||||| ||||||||| |||||||    
T  40754458 tcataaatgcaaagtagaatatattaaattgagagttgtgaaagtagtattaat 40754511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 100 - 247
Target Start/End: Original strand, 27932797 - 27932945
Alignment:
Q  100 tattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaa 198  Q
    ||||||| ||| || ||| ||||||||||||||||||||| ||| ||||| |||| ||||||||||||||||||| ||||||||||||| ||||||||||    
T  27932797 tattaagtaaaagtatataagtgaaagagagagaaaaatgcgtttgagtgtccttgtcaactattggtgcattcttctttatcataaatgcaaagtagaa 27932896  T
Q  199 tatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    ||||||||||||||||||||||| ||  ||||||||| | |||||||||    
T  27932897 tatattgaattgagagtggtgaaggttgtattaattagtattataattg 27932945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 87 - 342
Target Start/End: Original strand, 29225356 - 29225620
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgta---tgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctcttt-atca 182  Q
    |||||||||||| ||||||||||| |||||   | |||||||||| ||||||||||  || ||||||| || | || |||||||||||||| ||| ||||    
T  29225356 ctcatttcacacatattaagaaaaagtgtagtataagtgaaagagtgagaaaaatgattttgagtgcctttgttaagtattggtgcattcttttttatca 29225455  T
Q  183 taaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaa 282  Q
    |||||  |||||||||||||||||||||  ||||||||||||| ||||| || | ||||||||||       |||||||||||||||||| ||| |||||    
T  29225456 taaatggaaagtagaatatattgaattggaagtggtgaaagtagtattatttga-gttataattggaaaaaagtaattaatattgtattggaaaatgaaa 29225554  T
Q  283 tgggtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagta 342  Q
    ||||| ||||      ||||||||||||| |  ||||||||||||||||||||||| ||| |||||    
T  29225555 tgggttaatttttttaggacaatatttttttacaaatggctcagttattatgggacggagggagta 29225620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 101 - 340
Target Start/End: Complemental strand, 29225896 - 29225650
Alignment:
Q  101 attaagaaaaggtgtatgagtgaaagagagaga-aaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaattcaaagtagaa 198  Q
    |||||||||| |||||  ||||||||||||||| ||||| |||| ||||| | || |||| |||||||||||||  | ||||||||||| ||||||||||    
T  29225896 attaagaaaaagtgtacaagtgaaagagagagagaaaataggtttgagtgtc-ttgtcaagtattggtgcattcattcttatcataaatgcaaagtagaa 29225798  T
Q  199 tatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaa------tt 292  Q
    |||||||||||| ||||| |||||||| |||||||||  ||||||||||       ||||||| ||||||||||||||||||||||||||||      |     
T  29225797 tatattgaattgggagtgatgaaagtagtattaattagagttataattggaaaaaagtaattattattgtattgaaaagtgaaatgggtcaatctttttg 29225698  T
Q  293 ggacaatatttttgtgaaaatggctcagttattatgggactgagagag 340  Q
    ||||||||||||| |  ||||| ||||||||||||||| | |||||||    
T  29225697 ggacaatatttttttacaaatgactcagttattatggggcggagagag 29225650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 125 - 292
Target Start/End: Complemental strand, 33149392 - 33149225
Alignment:
Q  125 agagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaag 223  Q
    |||||||||||||||| || ||||| |||||| || |||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  33149392 agagagagaaaaatggatttgagtgtccttattaattattggtggattcttctttatcataaatgcaaagtagaatatattgaattgagagtgatgaaag 33149293  T
Q  224 taatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    || ||||||||| |||||| ||||       ||||||||||||| ||||||||||||||| ||||||||    
T  33149292 tagtattaattagtgttattattg-aaaaaagtaattaatattgcattgaaaagtgaaataggtcaatt 33149225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 127 - 292
Target Start/End: Complemental strand, 44580633 - 44580467
Alignment:
Q  127 agagagaaaaatgggttagagtgcccttatcaactattggtgcattctcttt-atcataaattcaaagtagaatatattgaattgagagtggtgaaagta 225  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||| | ||| ||||||||| |||||||||||||||| ||||  |||||||||| |||    
T  44580633 agagagaaaaatgggttagagtgaccttatcaactatttgtgcatttttttttatcataaatgcaaagtagaatatattaaattaggagtggtgaatgta 44580534  T
Q  226 atattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    |||||||||| ||||||||||         |||| |||||||||||||||||||||||| |||||||    
T  44580533 atattaattagtgttataattaggaaaaaataatgaatattgtattgaaaagtgaaatgagtcaatt 44580467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 80 - 195
Target Start/End: Original strand, 3160631 - 3160747
Alignment:
Q  80 cccttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcatt-ctcttt 178  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||| |||||||||| |||||||||||||||||  |||||    
T  3160631 cccttgactcatttcacacttattaagaaaaagtgtataagtgaaagagaaagaaaaatgggtttgagtgcccttgtcaactattggtgcattattcttt 3160730  T
Q  179 atcataaattcaaagta 195  Q
    ||||||||| |||||||    
T  3160731 atcataaatgcaaagta 3160747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 228
Target Start/End: Complemental strand, 5503579 - 5503435
Alignment:
Q  83 ttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatc 181  Q
    |||||||||||||||||||||||||||| |||||| | |||| ||||||  ||||||| ||   || ||||||||||||||||||||||||| |||||||    
T  5503579 ttgactcatttcacacttattaagaaaaagtgtataaatgaaggagaga--aaaatggttttaggtacccttatcaactattggtgcattcttctttatc 5503482  T
Q  182 ataaattcaaagtagaatatattgaattgagagtggtgaaagtaata 228  Q
    || ||||||||||| |||||||||||||||||||| |||||||||||    
T  5503481 attaattcaaagtataatatattgaattgagagtgatgaaagtaata 5503435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 88 - 284
Target Start/End: Original strand, 4466107 - 4466303
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaa 186  Q
    |||||||||||||||||||||||  | ||| |||||| |||||||||||||||||| |||| || || | || ||||||| |||||| ||||||||||||    
T  4466107 tcatttcacacttattaagaaaaa-tatattagtgaatgagagagaaaaatgggtttgagtacctttgttaagtattggtccattcttctttatcataaa 4466205  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    |  |||||||||||||||| ||||  ||||||||||||| |||||||||  ||||||||||        ||||||||||||||||| |||||||||||    
T  4466206 tgtaaagtagaatatattgtattggaagtggtgaaagtagtattaattagagttataattggaaaaaaataattaatattgtattggaaagtgaaatg 4466303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 83 - 292
Target Start/End: Original strand, 10587529 - 10587738
Alignment:
Q  83 ttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatc 181  Q
    |||||||||||||||||||||||||||| ||| || ||||||||| ||||||||||   ||  |||| | ||||||| ||| | | |||||| | |||||    
T  10587529 ttgactcatttcacacttattaagaaaaagtgcataagtgaaagaaagagaaaaataattttaagtgtcattatcaattat-gatacattcttcattatc 10587627  T
Q  182 ataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaa 281  Q
    |||||| |||| ||||||||||||||||||||||| |||||||| ||||||||| ||||||||||        ||||||||||||||||| || ||  ||    
T  10587628 ataaatgcaaaatagaatatattgaattgagagtgatgaaagtagtattaattagtgttataattagaaaaaagtaattaatattgtatttaagaggaaa 10587727  T
Q  282 atgggtcaatt 292  Q
    ||| |||||||    
T  10587728 atgagtcaatt 10587738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 101 - 290
Target Start/End: Complemental strand, 14352711 - 14352519
Alignment:
Q  101 attaagaaaaggtgtatgagtgaaagagagagaaaaa---tgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtag 196  Q
    ||||||||||| ||||| | ||||| |||||||||||   ||| || ||||| | || |||| |||||||||||||| ||||||| |||||  |||||||    
T  14352711 attaagaaaag-tgtataaatgaaatagagagaaaaaaaatggttttgagtgtctttgtcaagtattggtgcattcttctttatcgtaaatataaagtag 14352613  T
Q  197 aatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaa 290  Q
    |||||||||||||| ||||||||||||||||||||||||  ||||||||||        |||||||| |||||| ||||| |||||||||||||    
T  14352612 aatatattgaattgggagtggtgaaagtaatattaattacagttataattgagaaaaaataattaatgttgtatagaaaactgaaatgggtcaa 14352519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 87 - 284
Target Start/End: Original strand, 11425821 - 11426018
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataa 185  Q
    ||||||||||  ||||||||||||  | ||| |||||| ||||||||||||| | || ||||| | || | || ||||||| |||||| |||||||||||    
T  11425821 ctcatttcacgtttattaagaaaaa-tatattagtgaaggagagagaaaaatagttttgagtgtctttgttaagtattggtccattcttctttatcataa 11425919  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    ||  |||||||||||||||| ||||  ||| ||||||||| |||||||||| ||||||||||       |||||||||||||||||| |||||||||||    
T  11425920 atgtaaagtagaatatattgtattggaagtagtgaaagtagtattaattaaagttataattgaaaaaaagtaattaatattgtattggaaagtgaaatg 11426018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 87 - 284
Target Start/End: Complemental strand, 16040233 - 16040036
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataa 185  Q
    ||||||||||| ||||||||||||  | ||| ||| || ||||||||||||||| ||  |||| | || | || ||||||| |||||| |||||||||||    
T  16040233 ctcatttcacatttattaagaaaaa-tatattagtcaaggagagagaaaaatggttttaagtgtctttgttaagtattggttcattcttctttatcataa 16040135  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    ||  |||||||||||||||| ||||  ||||||||||||||||||| |||  ||||||||||       |||||||||||||||||| |||||||||||    
T  16040134 atgtaaagtagaatatattgtattggaagtggtgaaagtaatattatttagagttataattgaaaaaaagtaattaatattgtattggaaagtgaaatg 16040036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 89 - 247
Target Start/End: Original strand, 27209921 - 27210079
Alignment:
Q  89 catttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaat 187  Q
    ||||| |||| |||||||||||| ||||| | |||||||||||||||||||  || ||||| | ||  ||| |||||||||||||| |||||||||||||    
T  27209921 cattttacacatattaagaaaag-tgtataaatgaaagagagagaaaaatgattttgagtgtctttgacaagtattggtgcattcttctttatcataaat 27210019  T
Q  188 tcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
      |||| ||||||||||||||||||||||||||||  | |||||||||  ||||||||||    
T  27210020 gtaaaggagaatatattgaattgagagtggtgaaaagagtattaattagagttataattg 27210079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 156 - 290
Target Start/End: Original strand, 52382406 - 52382542
Alignment:
Q  156 tcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg-nnnnnn 253  Q
    |||| ||||| |||||||| |||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||           
T  52382406 tcaagtattgatgcattcttctttatcataaatgtaaagtaaaatatattgaattgagagtggtgaaagtaatattaattagagttataattgaaaaaaa 52382505  T
Q  254 ngtaattaatattgtattgaaaagtgaaatgggtcaa 290  Q
     ||||||||| |||||||||||| |||||||||||||    
T  52382506 agtaattaatgttgtattgaaaattgaaatgggtcaa 52382542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 292
Target Start/End: Original strand, 705303 - 705506
Alignment:
Q  90 atttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaatt 188  Q
    |||||| || |||||||||||  ||||| ||| ||||||| |||||||||  || || || | |||| || |||| ||||||||| |||||||||| ||     
T  705303 atttcatacatattaagaaaaaatgtataagttaaagagaaagaaaaatgattttgaatgtctttattaagtattagtgcattcttctttatcatagatg 705402  T
Q  189 caaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtc 288  Q
     |||||| |||||||||||||||||||||| ||||||||||||||||  |||||| |||        ||||||||||| |||||||||||||||| | ||    
T  705403 taaagtataatatattgaattgagagtggtaaaagtaatattaattagagttatatttggaaaaaaataattaatattatattgaaaagtgaaatagatc 705502  T
Q  289 aatt 292  Q
    ||||    
T  705503 aatt 705506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 101 - 291
Target Start/End: Original strand, 36232755 - 36232945
Alignment:
Q  101 attaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaat 199  Q
    ||||||||||| ||||| |  ||||||||||||||||||  || ||||| | ||  ||| |||||||||||||| |||||||||||||  ||||||||||    
T  36232755 attaagaaaag-tgtataaacgaaagagagagaaaaatgattttgagtgtctttgacaagtattggtgcattcttctttatcataaatataaagtagaat 36232853  T
Q  200 atattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaat 291  Q
    |||||||||||  | ||||||||||| |||||||||  ||||||||||       ||||||||| || ||||||||| |||||| |||||||    
T  36232854 atattgaattggaaatggtgaaagtagtattaattagagttataattggaaaaaagtaattaatgttttattgaaaactgaaataggtcaat 36232945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 123 - 290
Target Start/End: Original strand, 12267618 - 12267786
Alignment:
Q  123 aaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaa 221  Q
    ||||||| |||||||| | || ||||||  || |||| ||||||| |||||| |||||||||||||  ||||||||||||||||||||| |||| |||||    
T  12267618 aaagagaaagaaaaatagttttgagtgcatttttcaagtattggtacattcttctttatcataaatgtaaagtagaatatattgaattgggagttgtgaa 12267717  T
Q  222 agtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaa 290  Q
    |||| |||||| ||  ||||||||||       ||||||||| | |||||||||||||||||| |||||    
T  12267718 agtagtattaactagagttataattggaaaaaagtaattaatgtcgtattgaaaagtgaaatgagtcaa 12267786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 174
Target Start/End: Complemental strand, 26760437 - 26760346
Alignment:
Q  83 ttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct 174  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||| ||| |||| | |||||||| ||||||||||||||    
T  26760437 ttgactcatttcacacttattaagaaaaaatgtataagtgaaagagagagaaaaatgagtttgagttctcttatcaattattggtgcattct 26760346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 90 - 287
Target Start/End: Complemental strand, 27831997 - 27831801
Alignment:
Q  90 atttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaatt 188  Q
    ||||||||  |||||||||||| || ||||||||||||||||  ||||| | ||  ||||||||| |||| ||||||||||||| |  |||||||||||     
T  27831997 atttcacaaatattaagaaaag-tgcatgagtgaaagagaga--aaaatagttttaagtgcccttgtcaagtattggtgcattcaccattatcataaatg 27831901  T
Q  189 caaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgt-tataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggt 287  Q
    |||||| ||| ||||||||||| ||||| |||||||| |||||||||  || ||||||||       ||||||||| ||| |||||||||||||||||||    
T  27831900 caaagtggaagatattgaattgggagtgatgaaagtagtattaattagagtgtataattggaaaaaggtaattaatgttgcattgaaaagtgaaatgggt 27831801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 174 - 330
Target Start/End: Complemental strand, 50334004 - 50333842
Alignment:
Q  174 tctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattga 273  Q
    ||||||||||||||  |||||||| ||||||||||||||||||||||||||| |||||||||  |||||||||        ||||||||| || |||||     
T  50334004 tctttatcataaatgtaaagtagagtatattgaattgagagtggtgaaagtattattaattagagttataattaaaaaaaagtaattaatgttatattgg 50333905  T
Q  274 aaagtgaaatgggtcaa-----ttg-gacaatatttttgtgaaaatggctcagttattatggg 330  Q
    |||||||||||| ||||     ||| |||||||||||| || ||||| |||||||||||||||    
T  50333904 aaagtgaaatggatcaagattcttgcgacaatatttttttgcaaatgactcagttattatggg 50333842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 290
Target Start/End: Complemental strand, 16451677 - 16451584
Alignment:
Q  197 aatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaa 290  Q
    ||||||||||||||||||| ||||||||| |||||||||| ||||||||||       ||||||||| ||||||||||||||||||||||||||    
T  16451677 aatatattgaattgagagttgtgaaagtagtattaattaaagttataattggaaaaaagtaattaatgttgtattgaaaagtgaaatgggtcaa 16451584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 197 - 290
Target Start/End: Complemental strand, 16460830 - 16460737
Alignment:
Q  197 aatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaa 290  Q
    ||||||||||||||||||| ||||||||| |||||||||| ||||||||||       ||||||||| ||||||||||||||||||||||||||    
T  16460830 aatatattgaattgagagttgtgaaagtagtattaattaaagttataattggaaaaaagtaattaatgttgtattgaaaagtgaaatgggtcaa 16460737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 87 - 289
Target Start/End: Original strand, 3718802 - 3719002
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataa 185  Q
    ||||||||||||||||||||||||  ||||| | |||| ||||||||||||| | ||  ||||| ||| |||| |||| |||||||  || |||||||||    
T  3718802 ctcatttcacacttattaagaaaaa-tgtattaatgaa-gagagagaaaaatagttttaagtgctcttgtcaagtatttgtgcatttatcattatcataa 3718899  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgg 285  Q
    ||  |||||| |||||||||||||||||||| |||| ||| |||||||||  |||||| |||        |||||||||||| ||||||||||||||||     
T  3718900 atgtaaagtataatatattgaattgagagtgatgaaggtagtattaattagagttatagttggaaaaaa-taattaatattgcattgaaaagtgaaatga 3718998  T
Q  286 gtca 289  Q
    ||||    
T  3718999 gtca 3719002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 87 - 235
Target Start/End: Complemental strand, 34814073 - 34813925
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataa 185  Q
    ||||||||||||||||||||||||  ||||| |||||| ||||||||||||| | ||  ||||  ||| | || |||| |||||||  || |||||||||    
T  34814073 ctcatttcacacttattaagaaaaa-tgtattagtgaaggagagagaaaaatagttttaagtgttcttgttaagtattagtgcatttatcattatcataa 34813975  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    || ||||||||||||||||||||||||| || |||||||| |||| ||||    
T  34813974 atgcaaagtagaatatattgaattgagaatgatgaaagtagtattcatta 34813925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 292
Target Start/End: Original strand, 2219401 - 2219604
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaa 186  Q
    |||||||||||| |||||| |||  ||||| | |||||||||||||| ||||  || ||||| | |||| ||  |||| |||||||| ||||||||||||    
T  2219401 tcatttcacactgattaagtaaat-tgtataaatgaaagagagagaataatgattttgagtgtctttataaaagattgatgcattcttctttatcataaa 2219499  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatggg 286  Q
    |  |||||| ||||||||||||||  ||| ||||| ||| |||||||||  |||||||  |       |||||||||||||||||||||||||||||||     
T  2219500 tgtaaagtaaaatatattgaattggaagttgtgaacgtagtattaattagagttataa-agggaaaaagtaattaatattgtattgaaaagtgaaatggt 2219598  T
Q  287 tcaatt 292  Q
    ||||||    
T  2219599 tcaatt 2219604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 292
Target Start/End: Complemental strand, 2571514 - 2571315
Alignment:
Q  91 tttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaattc 189  Q
    |||||||| |||||||||||  ||||| | |||||||||||||||| | | || ||||| | || | || |||||||||||| | | ||||| ||||| |    
T  2571514 tttcacacatattaagaaaaaatgtataaatgaaagagagagaaaa-tagttttgagtgtc-ttgttaagtattggtgcattatttcttatcctaaatgc 2571417  T
Q  190 aaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtca 289  Q
    ||||||||||||||||||||||||||| |||||||| |||||| ||  |||||| |||       ||||||| | |||||||||||||||||||||| ||    
T  2571416 aaagtagaatatattgaattgagagtgatgaaagtagtattaactagagttatatttg-gaaaaagtaattattgttgtattgaaaagtgaaatgggcca 2571318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 190 - 287
Target Start/End: Original strand, 20988537 - 20988634
Alignment:
Q  190 aaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggt 287  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||  ||||||||||       ||||||||| |||||||||||| ||||||||||    
T  20988537 aaagtagaatatattgaattgggagtggtgaaaataatattaattagagttataattgaaaaaaagtaattaatgttgtattgaaaattgaaatgggt 20988634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 231
Target Start/End: Complemental strand, 27391498 - 27391359
Alignment:
Q  92 ttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaattca 190  Q
    ||||||||||||| |||||  ||||| |||||| ||||||||||||||  ||  ||||| ||||| || ||||||| ||||  || ||||||||||| ||    
T  27391498 ttcacacttattacgaaaaa-tgtataagtgaaggagagagaaaaatgattttaagtgctcttattaagtattggttcatttactattatcataaatgca 27391400  T
Q  191 aagtagaatatattgaattgagagtggtgaaagtaatatta 231  Q
    |||| |||||||||||||||| | |||||||||||||||||    
T  27391399 aagtggaatatattgaattgaaaatggtgaaagtaatatta 27391359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 16956700 - 16956582
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataa 185  Q
    ||||||| |||| ||||||||||| |||||| ||||||||  ||||||||||||||| ||||| | |||| || |||| |||||||| | ||||||||||    
T  16956700 ctcatttgacacatattaagaaaaagtgtataagtgaaaggaagagaaaaatgggtttgagtgtctttattaagtatttgtgcattcttatttatcataa 16956601  T
Q  186 attcaaagtagaatatatt 204  Q
    ||  |||||||||||||||    
T  16956600 atataaagtagaatatatt 16956582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 161 - 283
Target Start/End: Complemental strand, 17342911 - 17342788
Alignment:
Q  161 tattggtgcattctct-ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaat 259  Q
    |||||||||||||||  ||||||||||| ||||||  |||||||||||||||||||| | |||||| |||||||||  ||||||||         |||||    
T  17342911 tattggtgcattctccattatcataaatacaaagtgaaatatattgaattgagagtgataaaagtagtattaattagagttataatgaaaaaatagtaat 17342812  T
Q  260 taatattgtattgaaaagtgaaat 283  Q
    ||||||||||||||||||||||||    
T  17342811 taatattgtattgaaaagtgaaat 17342788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 292
Target Start/End: Original strand, 52146648 - 52146817
Alignment:
Q  119 agtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctttatcataaattcaaagtagaatatattgaattgagagtggt 218  Q
    |||||||||||||||||||||  || ||||| |||||| ||||||||||||||         ||||||| ||||||||||||| | ||||||||||| ||    
T  52146648 agtgaaagagagagaaaaatgattttgagtgtccttataaactattggtgcat---------cataaatgcaaagtagaatatgtcgaattgagagttgt 52146738  T
Q  219 gaaagtaatattaattaatgttataattg-----nnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    ||||||| |||||||||  ||||||||||            |||||||||||||||||||||||| ||||| |||||||    
T  52146739 gaaagtagtattaattagagttataattgaaagaaaaaaaagtaattaatattgtattgaaaagttaaatgagtcaatt 52146817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 88 - 235
Target Start/End: Original strand, 50267391 - 50267538
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaa 186  Q
    ||||||||||| |||||||||||  ||||| | |||||| ||||||||||| | ||  ||||| ||| | || |||||||||||||||  ||||||||||    
T  50267391 tcatttcacacgtattaagaaaaa-tgtataaatgaaagtgagagaaaaatagttttaagtgcacttgttaagtattggtgcattctccattatcataaa 50267489  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    |  |||||  |||||||||||||| || || ||||||||||||||||||    
T  50267490 tgtaaagtgaaatatattgaattgggaatgatgaaagtaatattaatta 50267538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 292
Target Start/End: Original strand, 18186247 - 18186362
Alignment:
Q  176 tttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaa 275  Q
    ||||||||||||  || ||| |||||| ||||||| |||||||||||||| |||||||||  ||||||||||       |||| ||||||||||||||||    
T  18186247 tttatcataaatataatgtaaaatatactgaattgggagtggtgaaagtagtattaattagagttataattgaaaaaaagtaa-taatattgtattgaaa 18186345  T
Q  276 agtgaaatgggtcaatt 292  Q
    ||||||||| |||||||    
T  18186346 agtgaaatgagtcaatt 18186362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 156 - 247
Target Start/End: Original strand, 19349015 - 19349106
Alignment:
Q  156 tcaactattggtgcattctctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    |||| |||||||||||||   ||||||||||| |||| ||||||||||||||||||||||  |||||||| |||||||||  ||||||||||    
T  19349015 tcaagtattggtgcattccaattatcataaatgcaaaatagaatatattgaattgagagttttgaaagtagtattaattagggttataattg 19349106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 284
Target Start/End: Original strand, 34877115 - 34877238
Alignment:
Q  161 tattggtgcattctct-ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaat 259  Q
    |||| ||||||| ||| ||||||||||| |||||| ||||||||||||||| ||||| ||||| ||||||||||||  ||||||| ||       |||||    
T  34877115 tattcgtgcattttctattatcataaatgcaaagttgaatatattgaattgtgagtgatgaaaataatattaattagagttataa-tgagaaaaagtaat 34877213  T
Q  260 taatattgtattgaaaagtgaaatg 284  Q
    ||||||||||||||||||| |||||    
T  34877214 taatattgtattgaaaagtaaaatg 34877238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 247
Target Start/End: Complemental strand, 40988358 - 40988271
Alignment:
Q  161 tattggtgcattctct-ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    |||||||| ||||||  |||| ||||||||||||||||||||||| ||| ||||||  ||||||||||||||||||| ||||||||||    
T  40988358 tattggtgtattctccattataataaattcaaagtagaatatattaaatcgagagtcatgaaagtaatattaattaaagttataattg 40988271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 190 - 286
Target Start/End: Original strand, 5359322 - 5359417
Alignment:
Q  190 aaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatggg 286  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||       ||||||||| |||||||||||| |||||||||    
T  5359322 aaagtagaatatattgatttgagagtggtgaaagtaatattaattagaattataattg-aaaaaagtaattaatgttgtattgaaaactgaaatggg 5359417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 87 - 292
Target Start/End: Complemental strand, 14090793 - 14090593
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctc-tttatcataa 185  Q
    ||||||||||||||||||||| ||  ||||| ||||||||||||| ||| |   ||| || || | ||||||||||||||||||||||  ||||||||||    
T  14090793 ctcatttcacacttattaagacaaaatgtataagtgaaagagagaaaaata---gtt-gattgtctttatcaactattggtgcattcttgtttatcataa 14090698  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaa---agtaatattaattaatgttataattgnnnnnnn-gtaattaatattgtattgaaaagtgaa 281  Q
    |      |||||||||||||||||| ||||||||||   |||| ||||||||  | |||||||||        |||||||||||||||||||||| ||||    
T  14090697 a------gtagaatatattgaattgtgagtggtgaatgtagtagtattaatttgtattataattgaaaaaaaagtaattaatattgtattgaaaaatgaa 14090604  T
Q  282 atgggtcaatt 292  Q
    || ||||||||    
T  14090603 attggtcaatt 14090593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 40061875 - 40061817
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    ||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  40061875 ttatcataaatgcaaattagaatatattgaattgagagtgatgaaagtaatattaatta 40061817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 88 - 187
Target Start/End: Original strand, 50773301 - 50773398
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataaa 186  Q
    ||||||| ||||||||||||||| |||||| ||||||||||||||   |||||||| |||||| ||||||||||||| ||| ||||| || |||||||||    
T  50773301 tcatttcgcacttattaagaaaacgtgtataagtgaaagagagag---aatgggtttgagtgctcttatcaactattagtgtattcttttctatcataaa 50773397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 25983644 - 25983737
Alignment:
Q  152 cttatcaactattggtgcattc-tctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    ||||| || ||||||||||||| | |||||||||||| |||| |||||||| ||||||| |||||| ||||| ||||||||||||| |||||||    
T  25983644 cttattaagtattggtgcattcatttttatcataaatgcaaaatagaatatgttgaatttagagtgatgaaattaatattaattaaagttataa 25983737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 45305919 - 45305850
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    ||||||||||| ||||||||||||||||||||||||| || ||||| |||| |||||||| |||||||||    
T  45305919 ttatcataaatgcaaagtagaatatattgaattgagattgatgaaaataattttaattaaagttataatt 45305850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 284
Target Start/End: Original strand, 48242633 - 48242739
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    ||||||||||  ||||| |||||||||||||||||| || | ||||||||||||||||| |||||||          |||||||||||||||||||||||    
T  48242633 tatcataaatgtaaagtggaatatattgaattgagaatgataaaagtaatattaattaaagttataaaaagaaaaaagtaattaatattgtattgaaaag 48242732  T
Q  278 tgaaatg 284  Q
    |||||||    
T  48242733 tgaaatg 48242739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 284
Target Start/End: Original strand, 49494115 - 49494311
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataa 185  Q
    |||||||||||| |||||||||||  ||||| | |||||||||||||||||| | ||  ||||| ||| | || |||||||  ||||||   ||||||||    
T  49494115 ctcatttcacacgtattaagaaaaa-tgtataaatgaaagagagagaaaaatagttttaagtgcacttgttaaatattggtcaattctccactatcataa 49494213  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    ||  ||||| ||||||||||||||   | || ||||||||||||||||||| |||||||  |       |||||||||| |||||||||||||||||||    
T  49494214 atgtaaagtggaatatattgaattagaaatgatgaaagtaatattaattaaagttataa-aggaaaaaagtaattaatagtgtattgaaaagtgaaatg 49494311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 247
Target Start/End: Complemental strand, 40019914 - 40019755
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaa 186  Q
    |||||| ||||| ||||||||||  ||||| |||||| ||||||||||||| | ||  ||||| ||| |||| |||| ||| |||| |  ||||||||||    
T  40019914 tcattttacactgattaagaaaaa-tgtataagtgaatgagagagaaaaattgttttaagtgctcttgtcaagtatttgtgtattcaccattatcataaa 40019816  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
      ||||||  || |||||||||| |||||| ||||||||||||||||||  ||||||||||    
T  40019815 gacaaagtgaaaaatattgaattcagagtgatgaaagtaatattaattagagttataattg 40019755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 87 - 202
Target Start/End: Complemental strand, 50926904 - 50926788
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataa 185  Q
    |||||||||||  |||||||||||  ||||| ||  |||||||||||||||||| || || |||  || |||| ||||||||||||| ||||||||||||    
T  50926904 ctcatttcacatatattaagaaaaattgtataagaaaaagagagagaaaaatggttttgaatgcatttgtcaagtattggtgcattcttctttatcataa 50926805  T
Q  186 attcaaagtagaatata 202  Q
    ||  |||||||||||||    
T  50926804 atgtaaagtagaatata 50926788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 5115850 - 5115925
Alignment:
Q  161 tattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    ||||| |||||||| |||||||||||||  ||  ||||||||||||||||||||| ||||||||||||||||||||    
T  5115850 tattgatgcattcttctttatcataaatgtaatatagaatatattgaattgagagaggtgaaagtaatattaatta 5115925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 89 - 246
Target Start/End: Original strand, 28706577 - 28706735
Alignment:
Q  89 catttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaat 187  Q
    |||||||||| |||||| ||||  ||||| | ||||  |||||||||||||| || ||||||| || |||| ||||| |||||| | |||||||||||||    
T  28706577 catttcacacatattaaaaaaaa-tgtataaatgaataagagagaaaaatggttttgagtgcctttgtcaagtattgatgcatttttctttatcataaat 28706675  T
Q  188 -tcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
     | ||| ||||||||||||||||   |||| ||||||| ||||||||||  |||||||||    
T  28706676 gtaaaaatagaatatattgaattagcagtgatgaaagttatattaattagagttataatt 28706735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 285
Target Start/End: Original strand, 30903269 - 30903377
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaa 276  Q
    ||||||||||| |||||||||||||||||||    ||||| ||||| ||||||||||||  ||||||||||        |||||||||||| ||||||||    
T  30903269 ttatcataaatgcaaagtagaatatattgaaacaggagtgatgaaaataatattaattagagttataattggaaaaaaataattaatattgaattgaaaa 30903368  T
Q  277 gtgaaatgg 285  Q
    |||||||||    
T  30903369 gtgaaatgg 30903377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 101 - 292
Target Start/End: Complemental strand, 51049649 - 51049460
Alignment:
Q  101 attaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctcttt-atcataaattcaaagtagaat 199  Q
    ||||||||||| ||||| | | |||||||||||||||||| || || || | ||||||| | || ||||||||| ||| |||||||||  |||||| |||    
T  51049649 attaagaaaag-tgtataaataaaagagagagaaaaatggttttgaatgtctttatcaagt-ttagtgcattcttttttatcataaatgtaaagtataat 51049552  T
Q  200 atattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    ||||||||||| |||| ||||||||| |||||||| |  |||||| |        ||||||||||||||||| ||||||||||| | ||||||    
T  51049551 atattgaattgggagttgtgaaagtagtattaatttaaattataaat-aaaaaaagtaattaatattgtattaaaaagtgaaatagctcaatt 51049460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 51749225 - 51749292
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    ||||||||||| |||||| ||||||||||||||| ||||| ||||||||||||||||||  |||||||    
T  51749225 ttatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtaatattaattagagttataa 51749292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 285
Target Start/End: Complemental strand, 8327782 - 8327675
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    |||||||||| |||| | ||||||||||||||||||||| |||||||| |||||||||  |||||||  |       |||||||||  ||||||||||||    
T  8327782 tatcataaatgcaaaatggaatatattgaattgagagtgatgaaagtagtattaattagagttataaagggaaaaaagtaattaatgatgtattgaaaag 8327683  T
Q  278 tgaaatgg 285  Q
    ||||||||    
T  8327682 tgaaatgg 8327675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 284
Target Start/End: Complemental strand, 27698858 - 27698771
Alignment:
Q  197 aatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    ||||||||||||||||| || ||||||||||||||||||  |||||||  |       ||||||||||||||||||||||||||||||    
T  27698858 aatatattgaattgagaatgatgaaagtaatattaattagagttataaagggaaaaaagtaattaatattgtattgaaaagtgaaatg 27698771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 88 - 244
Target Start/End: Complemental strand, 5442495 - 5442339
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataaa 186  Q
    ||||||||||| |||||||| ||  ||||| | |||| ||||||||||||||| ||  |||   ||| | || |||| ||||||||||   |||||||||    
T  5442495 tcatttcacacctattaagacaaa-tgtataaatgaatgagagagaaaaatggttttaagttatcttgttaagtattagtgcattctccactatcataaa 5442397  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    | |||||| |||||||||||||||  ||| |||||||||||||||||||  |||||||    
T  5442396 tgcaaagtggaatatattgaattggaagttgtgaaagtaatattaattatagttataa 5442339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 284
Target Start/End: Complemental strand, 36784379 - 36784273
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    |||||||||| ||||||  |||||||||||||   ||| |||||| ||||||||||||  ||||||| ||       |||||||||||||||||||||||    
T  36784379 tatcataaatgcaaagtgaaatatattgaatttgaagttgtgaaaataatattaattatagttataaatgaaaaaaagtaattaatattgtattgaaaag 36784280  T
Q  278 tgaaatg 284  Q
    |||||||    
T  36784279 tgaaatg 36784273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 37281017 - 37281090
Alignment:
Q  156 tcaactattggtgcattctcttt-atcataaattcaaagtagaatatattgaattgagagtggtgaaagtaata 228  Q
    |||| |||||||||||||| ||| |||||||||  ||||||||||||||||||||| |||| ||||||||||||    
T  37281017 tcaagtattggtgcattcttttttatcataaatgtaaagtagaatatattgaattgggagtagtgaaagtaata 37281090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 37495920 - 37495847
Alignment:
Q  153 ttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagta 225  Q
    ||||||| |||||||||||||| |||||| ||||||  ||||||||||||||||||||| |||| |||||||||    
T  37495920 ttatcaagtattggtgcattcttctttattataaatgtaaagtagaatatattgaattgggagtagtgaaagta 37495847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 178 - 284
Target Start/End: Complemental strand, 46536405 - 46536299
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    |||||||||| |||||| ||||||||| |||| |||||| |||||||| |||||||||  ||||||   |       |||||||||||||||||||||||    
T  46536405 tatcataaatacaaagtggaatatattaaattaagagtgatgaaagtagtattaattagagttatagagggaaaaatgtaattaatattgtattgaaaag 46536306  T
Q  278 tgaaatg 284  Q
    |||||||    
T  46536305 tgaaatg 46536299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 156 - 328
Target Start/End: Original strand, 47293619 - 47293796
Alignment:
Q  156 tcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnn 254  Q
    |||| |||||||||||||| |||||||||||||  ||| ||||||||||||||||| | |||||||| ||| |||||||||   |||| ||||           
T  47293619 tcaagtattggtgcattcttctttatcataaatataaattagaatatattgaattg-gcgtggtgaatgtagtattaattagaattatcattgaaaaaaa 47293717  T
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaa-----ttggacaatatttttgtgaaaatggctcagttattatg 328  Q
    ||||||||| |||| |||||||||||||||  ||||     ||||||||||||||| |  ||||| |||| ||||||||    
T  47293718 gtaattaatgttgttttgaaaagtgaaatgaatcaatatttttggacaatatttttttacaaatgtctcaattattatg 47293796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 244
Target Start/End: Original strand, 45889238 - 45889357
Alignment:
Q  126 gagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagt 224  Q
    ||||||||||||||| ||  ||||| ||| | ||||||||||  ||||||  ||||||||||| |||||| ||||||||||||||  || || |||||||    
T  45889238 gagagagaaaaatggttttaagtgctcttgttaactattggtctattctccattatcataaatgcaaagtggaatatattgaattatgaatgatgaaagt 45889337  T
Q  225 aatattaattaatgttataa 244  Q
    | |||||||||  |||||||    
T  45889338 agtattaattagagttataa 45889357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 345
Target Start/End: Complemental strand, 26760175 - 26760050
Alignment:
Q  225 aatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaatt------ggacaatatttttgtgaaaatggctc 318  Q
    ||||||||||| |||||||||||       ||||||||||||||||||||||||||||||  ||||||      ||||||||||||| |  |||||||||    
T  26760175 aatattaattagtgttataattgaaaaaatgtaattaatattgtattgaaaagtgaaatgaatcaatttttctgggacaatattttt-tacaaatggctc 26760077  T
Q  319 agttattatgggactgagagagtataa 345  Q
    | ||||||| |||| ||| ||||||||    
T  26760076 aattattataggacggagtgagtataa 26760050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 28839404 - 28839338
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||||| |||||| ||||||||||||||| ||||| |||||||| |||||||||  |||||||    
T  28839404 tatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtagtattaattatagttataa 28839338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 21304449 - 21304392
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    |||||||||| ||||||  ||||||||||||| |||||| ||||||||||||||||||    
T  21304449 tatcataaatgcaaagtgaaatatattgaattaagagtgatgaaagtaatattaatta 21304392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 284
Target Start/End: Complemental strand, 43895912 - 43895806
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    |||||||||| |||||| ||||||||||||||||||||  | ||| ||||||||||||  ||| |||          |||||||||||||||||||||||    
T  43895912 tatcataaatgcaaagttgaatatattgaattgagagtaataaaaataatattaattagagttgtaaagaggaaaaagtaattaatattgtattgaaaag 43895813  T
Q  278 tgaaatg 284  Q
    |||||||    
T  43895812 tgaaatg 43895806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 232
Target Start/End: Original strand, 52146345 - 52146449
Alignment:
Q  119 agtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctttatcataaattcaaagtagaatatattgaattgagagtggt 218  Q
    |||||||||||||||||||||  || ||||| |||||| ||||||||||||         ||||||||| ||||||| ||||| | ||||||||||| ||    
T  52146345 agtgaaagagagagaaaaatgattttgagtgtccttataaactattggtgc---------atcataaatgcaaagtaaaatatgtcgaattgagagttgt 52146435  T
Q  219 gaaagtaatattaa 232  Q
    ||||||| ||||||    
T  52146436 gaaagtagtattaa 52146449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 227 - 345
Target Start/End: Original strand, 26924361 - 26924484
Alignment:
Q  227 tattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaatt------ggacaatatttttgtgaaaatggctcag 320  Q
    ||||||||| |||||||||||       ||||||||||||||||||||||||||||||  ||||||      ||||||||||||| |  ||||| ||||     
T  26924361 tattaattagtgttataattgaaaaaatgtaattaatattgtattgaaaagtgaaatgaatcaatttttctgggacaatattttt-tacaaatgactcaa 26924459  T
Q  321 ttattatgggactgagagagtataa 345  Q
    |||||||||||| ||| ||||||||    
T  26924460 ttattatgggacggagggagtataa 26924484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 13500754 - 13500829
Alignment:
Q  161 tattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    |||||||||||||| |  |||||||||| |||||| ||| ||||||||||| ||||| |||||||| |||||||||    
T  13500754 tattggtgcattcttcactatcataaatgcaaagtggaaaatattgaattgggagtgctgaaagtagtattaatta 13500829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 283
Target Start/End: Original strand, 14358074 - 14358154
Alignment:
Q  203 ttgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaat 283  Q
    ||||||||||| || | ||||||||||||||||   |||||||||       |||||||||||||||||||||||||||||    
T  14358074 ttgaattgagaatgataaaagtaatattaattataattataattgagaaaaagtaattaatattgtattgaaaagtgaaat 14358154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 174 - 241
Target Start/End: Original strand, 21304845 - 21304912
Alignment:
Q  174 tctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgtta 241  Q
    ||||||||||||||  |||||| ||||||||||||| |||||||||||| || || ||||||| ||||    
T  21304845 tctttatcataaatataaagtataatatattgaattaagagtggtgaaaatattaataattaaagtta 21304912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 246
Target Start/End: Complemental strand, 25842691 - 25842596
Alignment:
Q  152 cttatcaactattggtgcattctct-ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    ||||| || ||||||| |||| ||| |||||||||||  |||||||||||||||| ||||||| || |||||||| | |||||||  |||||||||    
T  25842691 cttattaagtattggtacattttctattatcataaatgtaaagtagaatatattgcattgagaatgatgaaagtagtgttaattatagttataatt 25842596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 32587831 - 32587764
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    ||||||||||| ||||||  |||||||||||||||||||| ||||| || |||||||||  |||||||    
T  32587831 ttatcataaatgcaaagtgaaatatattgaattgagagtgatgaaattattattaattagagttataa 32587764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 36326159 - 36326257
Alignment:
Q  89 catttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataaat 187  Q
    ||||||||||  ||||||||||| ||||| | |||||||||||||| ||||| || ||||| | || |||| ||||||||||||| | ||||||||||||    
T  36326159 catttcacacagattaagaaaag-tgtataaatgaaagagagagaacaatggttttgagtgtctttgtcaaatattggtgcattcttgtttatcataaat 36326257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 246
Target Start/End: Complemental strand, 46273248 - 46273157
Alignment:
Q  156 tcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    |||| ||||| |||||||| ||||||| |||||  |||||||||| |||| |||| ||| |||||||| |||||||||||||  ||||||||    
T  46273248 tcaagtattgatgcattcttctttatcttaaatgtaaagtagaatgtattaaattcagaatggtgaaaataatattaattaaaattataatt 46273157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 244
Target Start/End: Original strand, 17724666 - 17724823
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataa 185  Q
    |||| ||||||||| |||||||||  ||||  | |||| ||||||||||||| | ||  ||||| ||| | || ||||| |||||||||   || |||||    
T  17724666 ctcaattcacacttgttaagaaaaa-tgtaataatgaaggagagagaaaaattgttttaagtgctcttgttaattattgatgcattctccactaccataa 17724764  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    || ||||||||||| |||||||||| ||||| ||||| || |||||||||  |||||||    
T  17724765 atgcaaagtagaatttattgaattgggagtgatgaaaatagtattaattagagttataa 17724823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 2886376 - 2886323
Alignment:
Q  80 cccttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagaga 133  Q
    |||||| ||||||||| |||||||||||||| |||||| ||||| |||||||||    
T  2886376 cccttggctcatttcatacttattaagaaaaagtgtataagtgagagagagaga 2886323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 284
Target Start/End: Original strand, 36467147 - 36467344
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataa 185  Q
    |||||||||||| |||||||||||  ||||| | |||| ||||||||||||| | ||  ||||| ||| | || |||||||| ||||||   ||| ||||    
T  36467147 ctcatttcacacgtattaagaaaaa-tgtataaatgaatgagagagaaaaatagttttaagtgcacttgttaagtattggtggattctccactatgataa 36467245  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    ||  |||||  ||||||||||||||  | || ||||| || ||||||||   |||||||  |       ||||||||||||||||||||||||||||||    
T  36467246 atgtaaagtgaaatatattgaattggaaatgatgaaaatagtattaatttgagttataaaggggaaaaagtaattaatattgtattgaaaagtgaaatg 36467344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 283
Target Start/End: Complemental strand, 44657399 - 44657305
Alignment:
Q  189 caaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaat 283  Q
    ||||||||||| ||||||||||  |||| ||||| ||||||||||||  ||||||||||       || ||||||||| |||||||||| |||||    
T  44657399 caaagtagaatctattgaattgcaagtgatgaaaataatattaattagagttataattgaaaaaaagttattaatattatattgaaaagagaaat 44657305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 50086078 - 50086017
Alignment:
Q  174 tctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    ||||||||||||||  ||||||||||||||||||||  | ||||||||| || |||||||||    
T  50086078 tctttatcataaatgtaaagtagaatatattgaatttggtgtggtgaaaatagtattaatta 50086017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 284
Target Start/End: Original strand, 52830366 - 52830562
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataa 185  Q
    |||||||||||| |||||| ||||  ||||| | |||| |||||||||||||   || ||||||  || | || |||||||||||| ||   ||||||||    
T  52830366 ctcatttcacacgtattaaaaaaaa-tgtataaatgaaggagagagaaaaataattttgagtgcatttgttaagtattggtgcattttccactatcataa 52830464  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    ||  ||||| ||||||||| ||||| || || ||||||||||| |||||||  ||||||          ||||||||||||||||||||||||||||||    
T  52830465 atgtaaagtggaatatattcaattg-gaatgatgaaagtaatactaattaaaattataaagagaaaaaagtaattaatattgtattgaaaagtgaaatg 52830562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 1859494 - 1859458
Alignment:
Q  256 taattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    ||||||||||||||||||||||||||||| |||||||    
T  1859494 taattaatattgtattgaaaagtgaaatgagtcaatt 1859458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 291
Target Start/End: Complemental strand, 15290478 - 15290442
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaat 291  Q
    ||||||||||||||||||||||||||||| |||||||    
T  15290478 gtaattaatattgtattgaaaagtgaaataggtcaat 15290442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 25819371 - 25819452
Alignment:
Q  161 tattggtgcattc-tctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttata 243  Q
    ||||||||||||| || ||||||||||| |||||||||| ||||| ||||||||  | ||||| || |||||||||| ||||||    
T  25819371 tattggtgcattcctccttatcataaatgcaaagtagaaaatattaaattgaga--gatgaaaatagtattaattaaagttata 25819452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 27932960 - 27932996
Alignment:
Q  256 taattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    |||||||||||||||||||||||||||||| ||||||    
T  27932960 taattaatattgtattgaaaagtgaaatggatcaatt 27932996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 2246319 - 2246374
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaa 232  Q
    |||||||||||  ||||||||| || |||||||||||||| |||||||| ||||||    
T  2246319 ttatcataaatgtaaagtagaagatgttgaattgagagtgatgaaagtagtattaa 2246374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 4659585 - 4659439
Alignment:
Q  89 catttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctcttta-tcataaat 187  Q
    ||||||||||||||||||||||  ||||| |||||| | ||||||||||| | ||  ||||| ||| | || ||||  ||||||  |  || ||| |||     
T  4659585 catttcacacttattaagaaaaa-tgtattagtgaaggggagagaaaaatagttttaagtgctcttgtgaagtatttttgcatttaccataatcacaaac 4659487  T
Q  188 tcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
     |||||||||||||||||||||  ||||| | ||||||||||||||||    
T  4659486 gcaaagtagaatatattgaattaggagtgataaaagtaatattaatta 4659439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 11324302 - 11324247
Alignment:
Q  189 caaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||| ||||||||||||||||||||| |||| ||| |||||||||  |||||||    
T  11324302 caaagtggaatatattgaattgagagtgatgaatgtagtattaattatagttataa 11324247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 11482323 - 11482268
Alignment:
Q  189 caaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||| ||||||||||||||||||||| |||| ||| |||||||||  |||||||    
T  11482323 caaagtggaatatattgaattgagagtgatgaatgtagtattaattatagttataa 11482268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 46496084 - 46496017
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    ||||||||||| |||||| ||||||||||||||  | ||| |||||||| |||||||||  |||||||    
T  46496084 ttatcataaatgcaaagtggaatatattgaattaggcgtgatgaaagtagtattaattagagttataa 46496017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 3555598 - 3555664
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||||| |||||| ||||||||||||||| ||  | |||||||| |||||||||  |||||||    
T  3555598 tatcataaatgcaaagtggaatatattgaattgggatagatgaaagtagtattaattagagttataa 3555664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 290
Target Start/End: Original strand, 7075441 - 7075557
Alignment:
Q  176 tttatcataaattcaaagtagaatata---ttgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattg 272  Q
    ||||||||||||  | |||||||||||   |||||||  |||| ||||||||| |||||||||  ||||||||||         ||||||| ||||||||    
T  7075441 tttatcataaatgtagagtagaatatagttttgaattcggagttgtgaaagtagtattaattagagttataattgaaaaaaaa-aattaatgttgtattg 7075539  T
Q  273 aaaagtgaaatgggtcaa 290  Q
    ||||||||||||||||||    
T  7075540 aaaagtgaaatgggtcaa 7075557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 10708029 - 10707971
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    ||||||||||| |||||| ||| ||||||||||| || || | ||||||||||||||||    
T  10708029 ttatcataaatgcaaagttgaagatattgaattgtgaatgattaaagtaatattaatta 10707971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 28908146 - 28908092
Alignment:
Q  190 aaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||||||||||||||||| |||| |||||||| |||| ||||  |||||||    
T  28908146 aaagtagaatatattgaattgatagtgatgaaagtagtatttattagagttataa 28908092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 50926226 - 50926176
Alignment:
Q  197 aatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    |||| ||||||||| ||||||||||| ||||||||||||  ||||||||||    
T  50926226 aatacattgaattgggagtggtgaaaataatattaattagagttataattg 50926176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 914808 - 914755
Alignment:
Q  182 ataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    |||||| |||||| ||| |||||||||||||| || ||||| ||||||||||||    
T  914808 ataaatacaaagtggaagatattgaattgagaatgatgaaattaatattaatta 914755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 284
Target Start/End: Complemental strand, 6784991 - 6784962
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatg 284  Q
    ||||||||||||||||||||||||||||||    
T  6784991 gtaattaatattgtattgaaaagtgaaatg 6784962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 284
Target Start/End: Original strand, 7785317 - 7785422
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    ||||||||||  |||||  |||||||||||||||||| | | |||||| |||||||||  |||||||  |        ||||||||||||||||||||||    
T  7785317 tatcataaatgtaaagtgaaatatattgaattgagagcgataaaagtagtattaattagagttataaagggaaaaaa-taattaatattgtattgaaaag 7785415  T
Q  278 tgaaatg 284  Q
    |||||||    
T  7785416 tgaaatg 7785422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 225
Target Start/End: Original strand, 31634282 - 31634381
Alignment:
Q  123 aaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataaattcaaagtagaatatattgaattgagagtggtgaa 221  Q
    |||||||||||||||||| |  ||||| | || | || ||||| ||||||| ||||||||||||||  ||||||||  ||||||||||| ||||| ||||    
T  31634282 aaagagagagaaaaatggtt--gagtgtctttgttaagtattgatgcattcctctttatcataaatgtaaagtaga--atattgaattgggagtgttgaa 31634377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 137
Target Start/End: Complemental strand, 34332265 - 34332217
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaa 137  Q
    ||||||||||| |||||||||||  ||||| |||||||||||||||||||    
T  34332265 tcatttcacacatattaagaaaaa-tgtataagtgaaagagagagaaaaa 34332217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 35622826 - 35622891
Alignment:
Q  182 ataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    |||||| ||||||||||||||||||||||  | |  |||||||| |||||||||  ||||||||||    
T  35622826 ataaatgcaaagtagaatatattgaattggcaattatgaaagtagtattaattagagttataattg 35622891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 290
Target Start/End: Complemental strand, 45049075 - 45048985
Alignment:
Q  200 atattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaa 290  Q
    ||||||||||  |||| ||||||||| |||||||||| | |||| |||       ||||||||| |||||||||||| ||||||| |||||    
T  45049075 atattgaattaggagttgtgaaagtagtattaattaaagctatatttggaaaaaagtaattaatgttgtattgaaaattgaaatgagtcaa 45048985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 210
Target Start/End: Original strand, 49662798 - 49662831
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattg 210  Q
    |||||||||||||||||||||||||||| |||||    
T  49662798 ttatcataaattcaaagtagaatatattaaattg 49662831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 244
Target Start/End: Complemental strand, 38664480 - 38664400
Alignment:
Q  165 ggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    ||||||||||||  |||||||||| |||| | ||||||||||||||  || || |||||||| |||||||||  |||||||    
T  38664480 ggtgcattctctactatcataaatgcaaaattgaatatattgaattaggaatgatgaaagtagtattaattagagttataa 38664400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 40988506 - 40988454
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgg 140  Q
    ||||||||||| |||||||||||   |||| ||||||||||||||| ||||||    
T  40988506 tcatttcacacatattaagaaaaatagtataagtgaaagagagagacaaatgg 40988454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 194
Target Start/End: Complemental strand, 49945088 - 49944981
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataa 185  Q
    |||||||||||| |||||||||||  ||||| | ||||  |||||||||||||| ||  ||||| ||| | || |||| |||||||| ||| ||||||||    
T  49945088 ctcatttcacacatattaagaaaa-atgtataaatgaagaagagagaaaaatggttttaagtgctcttgttaagtatttgtgcattcttctctatcataa 49944990  T
Q  186 attcaaagt 194  Q
    || ||||||    
T  49944989 atgcaaagt 49944981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 138; Significance: 4e-72; HSPs: 83)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 79 - 292
Target Start/End: Original strand, 13087685 - 13087899
Alignment:
Q  79 acccttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctcttt 178  Q
    ||||||| |||||||||||||||||||||||| |||||  ||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||    
T  13087685 acccttggctcatttcacacttattaagaaaaagtgtaaaagtgaaagagagagaaaaatgagtttgagtgtccttatcaactattggtgcattctcttt 13087784  T
Q  179 atcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg-nnnnnnngtaattaatattgtattgaaaag 277  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |        |||||||||||||||||||||||    
T  13087785 atcataaatgcaaagtagaatatattgaattgagagtggtgaaagtaatattaattagttttataatcgaaaaaaaagtaattaatattgtattgaaaag 13087884  T
Q  278 tgaaatgggtcaatt 292  Q
    ||||||| |||||||    
T  13087885 tgaaatgagtcaatt 13087899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 79 - 292
Target Start/End: Original strand, 13016307 - 13016521
Alignment:
Q  79 acccttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctcttt 178  Q
    ||||||| |||||||||||||||||||||||| |||||  ||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||    
T  13016307 acccttggctcatttcacacttattaagaaaaagtgtaaaagtgaaagagagagaaaaatgagtttgagtgtccttatcaactattggtgcattctcttt 13016406  T
Q  179 atcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg-nnnnnnngtaattaatattgtattgaaaag 277  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| | ||||||| |        |||||||||||||||||||||||    
T  13016407 atcataaatgcaaagtagaatatattgaattgggagtggtgaaagtaatattaattagttttataatcgaaaaaaaagtaattaatattgtattgaaaag 13016506  T
Q  278 tgaaatgggtcaatt 292  Q
    ||||||| |||||||    
T  13016507 tgaaatgagtcaatt 13016521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 81 - 284
Target Start/End: Complemental strand, 31090467 - 31090263
Alignment:
Q  81 ccttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tcttta 179  Q
    ||||||||||||| ||| ||||||||||||  ||||| ||||||| |||||||||||||  || ||||||||||||||||||||||||||||| ||||||    
T  31090467 ccttgactcattttacatttattaagaaaaaatgtataagtgaaaaagagagaaaaatgattttgagtgcccttatcaactattggtgcattcttcttta 31090368  T
Q  180 tcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtg 279  Q
    |||||||  ||||||||||||||| |||||||||||| |||||||| ||||||||| |||||| ||||       |||||||||||||||||||||||||    
T  31090367 tcataaacgcaaagtagaatatatggaattgagagtgttgaaagtagtattaattagtgttatgattgaaaaaaagtaattaatattgtattgaaaagtg 31090268  T
Q  280 aaatg 284  Q
    |||||    
T  31090267 aaatg 31090263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 83 - 292
Target Start/End: Complemental strand, 42819064 - 42818855
Alignment:
Q  83 ttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatc 181  Q
    |||||||||||||||||||||||||||| |||||| ||| ||||||| |||||||||| || |||||||||||| ||  |||||||||||| ||||||||    
T  42819064 ttgactcatttcacacttattaagaaaaagtgtataagtaaaagagaaagaaaaatggttttgagtgcccttattaatcattggtgcattcttctttatc 42818965  T
Q  182 ataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaa 281  Q
    ||||||  |||||||||||||||||| |||||||||||||| || |||||||||  ||||||||||       |||||||||||| ||||||||||||||    
T  42818964 ataaatgtaaagtagaatatattgaa-tgagagtggtgaaaatagtattaattagagttataattgaaaaaaagtaattaatattatattgaaaagtgaa 42818866  T
Q  282 atgggtcaatt 292  Q
    || ||||||||    
T  42818865 ataggtcaatt 42818855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 83 - 331
Target Start/End: Original strand, 39060898 - 39061156
Alignment:
Q  83 ttgactcatttcacacttattaagaaaaggtgta---tgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-cttt 178  Q
    ||||||||||||||||||||||||||||  ||||   | ||||||||||||||||||||| ||| ||||| |||| ||||| | | ||||||||| ||||    
T  39060898 ttgactcatttcacacttattaagaaaaaatgtagtataagtgaaagagagagaaaaatgagtttgagtgtccttgtcaaccactagtgcattcttcttt 39060997  T
Q  179 atcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagt 278  Q
    ||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||    
T  39060998 atcataaatgcaaagtagaatatattgaattaggagtggtgaaagtaatattaattaatgttataattaaaaaaatttaattaatattgtattgaaaagt 39061097  T
Q  279 gaaatgggtcaatt------ggacaatatttttgtgaaaatggctcagttattatggga 331  Q
    ||||||  ||||||       |||||||||||| || |||||  |||||||||||||||    
T  39061098 gaaatgaatcaatttttctatgacaatatttttttgtaaatgattcagttattatggga 39061156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 114 - 331
Target Start/End: Complemental strand, 15898321 - 15898098
Alignment:
Q  114 gtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgag 212  Q
    |||| ||||||||||||||||||||| |||  |||| |||||| |||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||    
T  15898321 gtataagtgaaagagagagaaaaatgagtttaagtgtccttattaactattgatgcattcttctttatcataaatgcaaagtagaatatattgaattgag 15898222  T
Q  213 agtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaatt------ggacaatatttttg 306  Q
    ||||||||||||||||||||||| |||||||||||       |||||||||||||||||||||||||||||  |||||||        |||||||||||     
T  15898221 agtggtgaaagtaatattaattagtgttataattg-aaaaaagtaattaatattgtattgaaaagtgaaataagtcaatttttctgaaacaatatttttt 15898123  T
Q  307 tgaaaatggctcagttattatggga 331  Q
    || |||| |||||||||||||||||    
T  15898122 tgcaaatagctcagttattatggga 15898098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 87 - 235
Target Start/End: Original strand, 15564844 - 15564988
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctttatcataaa 186  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||   || |||| ||||||||||||||||||||||    |||||||||||    
T  15564844 ctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaataattttgagtacccttatcaactattggtgcat----tttatcataaa 15564939  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    | |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  15564940 tgcaaagtagaatatattaaattgagagtgatgaaagtaatattaatta 15564988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 86 - 235
Target Start/End: Complemental strand, 38979062 - 38978912
Alignment:
Q  86 actcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcatt-ctctttatcata 184  Q
    ||||||||||||||||||||||||| |||||  || |||||||| |||||||||| || |||||||||||| |||||||||| |||| ||||||||||||    
T  38979062 actcatttcacacttattaagaaaaagtgtacaagggaaagagatagaaaaatggttttgagtgcccttattaactattggtacattcctctttatcata 38978963  T
Q  185 aattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    ||| |||||||||||||||| |||||||||| |||| |||| |||||||||    
T  38978962 aatgcaaagtagaatatattaaattgagagttgtgatagtagtattaatta 38978912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 83 - 209
Target Start/End: Original strand, 5147443 - 5147570
Alignment:
Q  83 ttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatc 181  Q
    ||||||||||||||||||||||||||||  | ||| ||||||||| |||||||||||  || ||||| ||||||||||||||||||||||| ||||||||    
T  5147443 ttgactcatttcacacttattaagaaaaaatatataagtgaaagaaagagaaaaatgattttgagtgtccttatcaactattggtgcattcttctttatc 5147542  T
Q  182 ataaattcaaagtagaatatattgaatt 209  Q
    |||||| |||||||||||||||||||||    
T  5147543 ataaatgcaaagtagaatatattgaatt 5147570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 87 - 342
Target Start/End: Original strand, 16926040 - 16926302
Alignment:
Q  87 ctcatttcacacttattaagaaaag-gt-gtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcat 183  Q
    |||||||||||| |||||| | ||| || |||| |||||||||| ||||||||||| || ||||||| |  | || |||||||||||||| |||||||||    
T  16926040 ctcatttcacacatattaaaagaagtgtagtataagtgaaagagtgagaaaaatggttttgagtgccttcgttaagtattggtgcattcttctttatcat 16926139  T
Q  184 aaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaat 283  Q
    ||||  |||||||||||||||||||||  ||| ||||||||  ||||| || | ||||||||||       |||||||||||||||||| ||| ||||||    
T  16926140 aaatggaaagtagaatatattgaattggaagttgtgaaagt-gtattatttga-gttataattggaaaaaagtaattaatattgtattggaaaatgaaat 16926237  T
Q  284 gggtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagta 342  Q
    |||||||||      ||||||||||||| |  |||||| |||||||||||||||| |||||||||    
T  16926238 gggtcaatttttttaggacaatatttttttacaaatggatcagttattatgggacggagagagta 16926302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 199 - 332
Target Start/End: Complemental strand, 4194684 - 4194545
Alignment:
Q  199 tatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaatt------ 292  Q
    |||||||||||| |||||||||||||| ||||||||| |||||||||||       ||||||||||||||||||||||||||||||||| ||||          
T  4194684 tatattgaattgggagtggtgaaagtagtattaattagtgttataattgaaaaaaagtaattaatattgtattgaaaagtgaaatgggttaatttttctg 4194585  T
Q  293 ggacaatatttttgtgaaaatggctcagttattatgggac 332  Q
    ||||||||||||| || |||||||||||||||||||||||    
T  4194584 ggacaatatttttttgtaaatggctcagttattatgggac 4194545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 87 - 284
Target Start/End: Original strand, 5357769 - 5357966
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataa 185  Q
    |||||| |||||||||||||||||  | ||| |||||| ||||||||||||||| || ||||| | || | || ||||||| |||||| |||||||||||    
T  5357769 ctcattacacacttattaagaaaaa-tatattagtgaaggagagagaaaaatggttttgagtgtctttgttaagtattggttcattcttctttatcataa 5357867  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    ||  |||||||||||||||| ||||  |||||||||||||||||||||||  |||||||||        |||||||||| ||||||| |||||||||||    
T  5357868 atgtaaagtagaatatattgtattggaagtggtgaaagtaatattaattagagttataatttgaaaaaagtaattaatactgtattggaaagtgaaatg 5357966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 80 - 200
Target Start/End: Complemental strand, 4195097 - 4194975
Alignment:
Q  80 cccttgactcatttcacacttattaagaaaag-gtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctt 177  Q
    |||||||| ||||||||||||||||||||||  |||||| ||| |||||||||||||||||| || |||||||||||| |||||||| ||||||| ||||    
T  4195097 cccttgacgcatttcacacttattaagaaaaaagtgtataagtaaaagagagagaaaaatggttttgagtgcccttatgaactattgatgcattcttctt 4194998  T
Q  178 tatcataaattcaaagtagaata 200  Q
    ||||||||||  |||||||||||    
T  4194997 tatcataaatgaaaagtagaata 4194975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 87 - 247
Target Start/End: Original strand, 25111101 - 25111260
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataa 185  Q
    |||||||||||| ||||||||||||| |||  |||||||||||||  ||||| | || ||||| | || |||| ||||| |||||||| |||||||||||    
T  25111101 ctcatttcacacatattaagaaaaggagtaaaagtgaaagagaga--aaaatagttttgagtgtctttgtcaagtattgctgcattcttctttatcataa 25111198  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    ||  |||||||||||||||||||||  ||||||||||||| ||||||||||  |||||||||    
T  25111199 atgtaaagtagaatatattgaattggaagtggtgaaagtagtattaattaaaattataattg 25111260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 87 - 247
Target Start/End: Original strand, 25170192 - 25170351
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataa 185  Q
    |||||||||||| ||||||||||||| |||  |||||||||||||  ||||| | || ||||| | || |||| ||||| |||||||| |||||||||||    
T  25170192 ctcatttcacacatattaagaaaaggagtaaaagtgaaagagaga--aaaatagttttgagtgtctttgtcaagtattgctgcattcttctttatcataa 25170289  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    ||  |||||||||||||||||||||  ||||||||||||| ||||||||||  |||||||||    
T  25170290 atgtaaagtagaatatattgaattggaagtggtgaaagtagtattaattaaaattataattg 25170351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 119 - 284
Target Start/End: Original strand, 39035838 - 39036004
Alignment:
Q  119 agtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataaattcaaagtagaatatattgaattgagagtgg 217  Q
    ||||||||||| |||||||| | || || |||||||| || ||||| |||||||| |||||||||||| | ||||||  |||||||| ||||||||||||    
T  39035838 agtgaaagagatagaaaaattgttttgaatgcccttaccagctattagtgcattcctctttatcataactacaaagtgaaatatattaaattgagagtgg 39035937  T
Q  218 tgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    | |||||| | ||||||| |||||||| |        ||||||||||||||||||||||||||||||    
T  39035938 taaaagtagttttaattagtgttataagtagaaaaaggtaattaatattgtattgaaaagtgaaatg 39036004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 82 - 225
Target Start/End: Complemental strand, 31196481 - 31196337
Alignment:
Q  82 cttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttat 180  Q
    |||| ||||||||||||||||||||||||  ||||| | ||||||||| |||||||| | || ||||| |||| |||  ||||| |||||| | ||||||    
T  31196481 cttggctcatttcacacttattaagaaaatatgtataaatgaaagagatagaaaaatagttttgagtgtccttgtcatttattgctgcatttttctttat 31196382  T
Q  181 cataaattcaaagtagaatatattgaattgagagtggtgaaagta 225  Q
     ||| || ||||||||||||||||| |||||||||||||||||||    
T  31196381 tatacatgcaaagtagaatatattggattgagagtggtgaaagta 31196337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 86 - 284
Target Start/End: Original strand, 11099428 - 11099626
Alignment:
Q  86 actcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcata 184  Q
    ||||||||||||| |||||||||||  ||||| | |||||||||||||||||| | ||  ||||   || | || |||||||||||||||   |||||||    
T  11099428 actcatttcacacatattaagaaaaa-tgtataaatgaaagagagagaaaaatagttttaagtgtttttgttaagtattggtgcattctccactatcata 11099526  T
Q  185 aattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    ||| |||||| ||||||||||||||| ||||| |||||||| |||||||||  |||||||  |       |||||||||||||||||| |||||||||||    
T  11099527 aatacaaagtggaatatattgaattgggagtgatgaaagtagtattaattagagttataaaggggaaaaagtaattaatattgtattggaaagtgaaatg 11099626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 87 - 247
Target Start/End: Complemental strand, 25108728 - 25108569
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataa 185  Q
    |||||||||||| ||||||||||||| |||  |||||||||||||  ||||| | || ||||| | || | || ||||| |||||||| |||||||||||    
T  25108728 ctcatttcacacatattaagaaaaggagtaaaagtgaaagagaga--aaaatagttttgagtgtctttgttaagtattgctgcattcttctttatcataa 25108631  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    ||  |||||| ||||||||||||||  ||||||||||||| ||||||||||  |||||||||    
T  25108630 atgtaaagtataatatattgaattggaagtggtgaaagtagtattaattaaaattataattg 25108569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 87 - 247
Target Start/End: Complemental strand, 25167820 - 25167661
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataa 185  Q
    |||||||||||| ||||||||||||| |||  |||||||||||||  ||||| | || ||||| | || | || ||||| |||||||| |||||||||||    
T  25167820 ctcatttcacacatattaagaaaaggagtaaaagtgaaagagaga--aaaatagttttgagtgtctttgttaagtattgctgcattcttctttatcataa 25167723  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    ||  |||||| ||||||||||||||  ||||||||||||| ||||||||||  |||||||||    
T  25167722 atgtaaagtataatatattgaattggaagtggtgaaagtagtattaattaaaattataattg 25167661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 285
Target Start/End: Original strand, 42575591 - 42575788
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataaa 186  Q
    ||||||||||| |||||||| ||  ||||| | |||| ||||||||||||||| ||  ||||| |||   || |||||||| ||||||   |||||||||    
T  42575591 tcatttcacacatattaagacaaa-tgtataaatgaatgagagagaaaaatggttttaagtgctcttggtaagtattggtgtattctccactatcataaa 42575689  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgg 285  Q
    | |||||| |||||||||||||||  ||| ||||||||| |||||||||| |||||||  |       |||||||||||||||||||||||||||||||    
T  42575690 tgcaaagtggaatatattgaattggaagttgtgaaagtagtattaattaaagttataaagggaaaaaagtaattaatattgtattgaaaagtgaaatgg 42575788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 161 - 292
Target Start/End: Original strand, 72130 - 72262
Alignment:
Q  161 tattggtgcatt-ctctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaat 259  Q
    |||||||||||| ||  ||||||||||| |||||||||||||||| ||||  ||||| |||||||| |||||||||   |||||||||       |||||    
T  72130 tattggtgcatttcttcttatcataaatgcaaagtagaatatattaaattaggagtgatgaaagtagtattaattagatttataattgggaaaaagtaat 72229  T
Q  260 taatattgtattgaaaagtgaaatgggtcaatt 292  Q
    || ||||||||||||||||||||||||||||||    
T  72230 tattattgtattgaaaagtgaaatgggtcaatt 72262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 153 - 284
Target Start/End: Original strand, 4044494 - 4044625
Alignment:
Q  153 ttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnn 251  Q
    ||||||| |||||||||||||| |||||||||||||  ||||||||||||||||||||| | ||||||||| || ||||||||||  ||||||  |        
T  4044494 ttatcaagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaattgggtgtggtgaaaatattattaattaaatttataa-aggaaa 4044592  T
Q  252 nnngtaattaatattgtattgaaaagtgaaatg 284  Q
       ||||||||||||||||||||||||||||||    
T  4044593 aaagtaattaatattgtattgaaaagtgaaatg 4044625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 88 - 246
Target Start/End: Complemental strand, 35988789 - 35988631
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaa 186  Q
    ||||||||||  |||||||||||  | ||| ||||||| |||||||||||| | ||  ||||   || |||| |||||||||||||  | ||||||||||    
T  35988789 tcatttcacatatattaagaaaaaatttataagtgaaacagagagaaaaatagttttaagtgtg-ttgtcaagtattggtgcattcattcttatcataaa 35988691  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    | |||||| ||||||||||||||| ||||||||||||| ||||||||||| |||||||||    
T  35988690 tgcaaagttgaatatattgaattgggagtggtgaaagtgatattaattaaagttataatt 35988631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 87 - 225
Target Start/End: Original strand, 39060374 - 39060512
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataa 185  Q
    ||||||||||||||||||||||||  | ||| |||||| ||||||||||||||| || ||||||  || | || ||||||| |||||| |||||||||||    
T  39060374 ctcatttcacacttattaagaaaaa-tatattagtgaaggagagagaaaaatggttttgagtgcatttgttaagtattggtccattcttctttatcataa 39060472  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagta 225  Q
    || ||||||||| ||||||| ||||  |||||||||||||    
T  39060473 atgcaaagtagactatattgtattggaagtggtgaaagta 39060512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 87 - 247
Target Start/End: Original strand, 6172932 - 6173092
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataa 185  Q
    ||||||||||||||||||||||||  ||||| ||||||  ||||| |||||| | ||  ||||| |||||||| ||||  ||||||  |  |||||||||    
T  6172932 ctcatttcacacttattaagaaaaa-tgtattagtgaagaagagataaaaatagttttaagtgctcttatcaaatattaatgcatttaccattatcataa 6173030  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    || ||||||| |||||||||||||| ||||| |||||||| |||||||||  ||||||||||    
T  6173031 atgcaaagtataatatattgaattgtgagtgatgaaagtagtattaattatagttataattg 6173092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 153 - 285
Target Start/End: Complemental strand, 7871404 - 7871271
Alignment:
Q  153 ttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg-nnn 250  Q
    |||||||||||||||| ||| | |||||||||||||  ||||||||||||||| ||||| |||||||||||||| ||||||||| | |||||||||        
T  7871404 ttatcaactattggtgtatttttctttatcataaatgtaaagtagaatatattaaattg-gagtggtgaaagtagtattaattagtattataattgaaaa 7871306  T
Q  251 nnnngtaattaatattgtattgaaaagtgaaatgg 285  Q
        |||||||||||||||||||||| ||||||||    
T  7871305 aaaagtaattaatattgtattgaaaaatgaaatgg 7871271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 156 - 344
Target Start/End: Original strand, 36006912 - 36007104
Alignment:
Q  156 tcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnn 254  Q
    |||| |||| ||||||||| |||||||||||||  ||||||||||||| |||||||  |||||||||| ||||||||||||  ||||||||||           
T  36006912 tcaagtatttgtgcattcttctttatcataaatgtaaagtagaatatactgaattggaagtggtgaaaataatattaattagagttataattggaaaaa- 36007010  T
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaa-----ttggacaatatttttgtgaaaatggctcagttattatgggactgagagagtata 344  Q
     |||| ||| ||||||||||||||||||| | ||||     ||||||||||||||| |  ||||| ||||||||||||| ||| ||| |||||||    
T  36007011 -taataaatgttgtattgaaaagtgaaatagatcaatatttttggacaatatttttttacaaatgactcagttattatgagacggagggagtata 36007104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 276
Target Start/End: Original strand, 39183670 - 39183767
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaa 276  Q
    |||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||  ||||||||||       ||||||||||||||||||||||    
T  39183670 tatcataaatgcaaagtggaatatattgaattgagagtgatgaaagtaatattaattagagttataattg-aaaaaagtaattaatattgtattgaaaa 39183767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 19889574 - 19889645
Alignment:
Q  176 tttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    ||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||    
T  19889574 tttatcataaatgtaaagtagaatatattgaattgaaagtggtgaaagtaatattaattagagttataattg 19889645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 331
Target Start/End: Complemental strand, 34534985 - 34534830
Alignment:
Q  180 tcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtg 279  Q
    ||||||||  |||||| ||||||||||||||||| || | ||||||||||||||||  ||||||||||        ||||||||||||||||||||||||    
T  34534985 tcataaatataaagtataatatattgaattgagaatgataaaagtaatattaattagagttataattgaaaaaa--taattaatattgtattgaaaagtg 34534888  T
Q  280 aaatgggtcaatt------ggacaatatttttgtgaaaatggctcagttattatggga 331  Q
    || ||  ||||||      ||||||||||||| || |||||||||| |||||||||||    
T  34534887 aactgaatcaatttttttgggacaatatttttttgtaaatggctcacttattatggga 34534830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 7311171 - 7311279
Alignment:
Q  127 agagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagta 225  Q
    |||||||||||||| ||  ||||| |||||||| |||| |||||||  |  ||||||||||| ||||||||||||||||||||| |||||| ||||||||    
T  7311171 agagagaaaaatggttttaagtgctcttatcaagtatttgtgcatttaccattatcataaatgcaaagtagaatatattgaattaagagtgatgaaagta 7311270  T
Q  226 atattaatt 234  Q
    | |||||||    
T  7311271 acattaatt 7311279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 178 - 282
Target Start/End: Original strand, 35585659 - 35585764
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg-nnnnnnngtaattaatattgtattgaaaa 276  Q
    |||||||||  ||||||  |||||||||||||||||||| ||||||||||||| ||||| ||||||||||        ||||||||||||||||||||||    
T  35585659 tatcataaagacaaagtgaaatatattgaattgagagtgatgaaagtaatattgattaaagttataattgaaaaaaaagtaattaatattgtattgaaaa 35585758  T
Q  277 gtgaaa 282  Q
    ||||||    
T  35585759 gtgaaa 35585764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 88 - 247
Target Start/End: Original strand, 39212507 - 39212663
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct--ttatcataa 185  Q
    ||||||||| | |||||||||||  ||||| |||||||||||||  ||||| | |  ||||||| || |||| ||||||||||||| |   |||||||||    
T  39212507 tcatttcacgcatattaagaaaaattgtataagtgaaagagaga--aaaattgtt--gagtgcc-ttgtcaagtattggtgcattcccccattatcataa 39212601  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    || |||||||||||||||||||||| ||| | |||||||| |||||||||  ||||||||||    
T  39212602 atgcaaagtagaatatattgaattgggagcgatgaaagtagtattaattagagttataattg 39212663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 289
Target Start/End: Complemental strand, 4475399 - 4475199
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaa 186  Q
    ||||| ||||| |||||||||||| ||||| ||||||||| |||||||||| | |  ||||| |||| |||| ||||||||||||| |  ||||||||||    
T  4475399 tcattgcacacatattaagaaaag-tgtataagtgaaagaaagagaaaaattgtt--gagtgtccttgtcaagtattggtgcattcaccattatcataaa 4475303  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgt-tataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgg 285  Q
    | |||||| ||| || ||||||||  | || | |||||| |||||||||  || ||||||||       ||||||||||||| ||||||||||||| |||    
T  4475302 tgcaaagtggaaaatgttgaattggaaatgataaaagtagtattaattatagtgtataattggaaatatgtaattaatattgcattgaaaagtgaattgg 4475203  T
Q  286 gtca 289  Q
    ||||    
T  4475202 gtca 4475199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 87 - 244
Target Start/End: Complemental strand, 3725342 - 3725185
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataa 185  Q
    |||||||||||| |||||||||||  ||||| |  ||| ||||||||||||||| ||  |||||  || | || |||||||||||||||   ||||||||    
T  3725342 ctcatttcacacatattaagaaaaa-tgtataaaggaaggagagagaaaaatggttttaagtgctattgttaagtattggtgcattctccactatcataa 3725244  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    || || ||| |||||||| |||||| ||||| ||||||||||||||||||  |||||||    
T  3725243 atgcatagtggaatatatcgaattgtgagtgatgaaagtaatattaattagagttataa 3725185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 122 - 283
Target Start/End: Complemental strand, 10044790 - 10044629
Alignment:
Q  122 gaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctcttt-atcataaattcaaagtagaatatattgaattgagagtggtga 220  Q
    |||| |||||||||||| | || |||||   || |||| ||||| |||||||| ||| |||||||||  |||||| | |||||||| |||||||| ||||    
T  10044790 gaaatagagagaaaaatagttttgagtgtatttttcaagtattgatgcattcttttttatcataaatgtaaagtaaagtatattgatttgagagttgtga 10044691  T
Q  221 aagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaat 283  Q
    |||||||||||||||  |||||||||        ||||||||| |||||||||||||||||||    
T  10044690 aagtaatattaattagagttataatt-aaaaaaagtaattaatgttgtattgaaaagtgaaat 10044629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 244
Target Start/End: Original strand, 17242939 - 17243063
Alignment:
Q  121 tgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtg 219  Q
    |||| ||||||||||||||| ||  ||| | ||| | || |||||||  |||||||  |||||||||| |||||| ||||||||||||||||||||| ||    
T  17242939 tgaatgagagagaaaaatggtttttagtactcttgttaagtattggtctattctctactatcataaatgcaaagtggaatatattgaattgagagtgatg 17243038  T
Q  220 aaagtaatattaattaatgttataa 244  Q
    |||||| |||||||||  |||||||    
T  17243039 aaagtagtattaattagagttataa 17243063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 792059 - 791984
Alignment:
Q  161 tattggtgcattc-tctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    ||||||||||||| ||||||| |||||| |||| ||||||||||||||||  |||||||||||||| |||||||||    
T  792059 tattggtgcattcctctttattataaatgcaaaatagaatatattgaattatgagtggtgaaagtagtattaatta 791984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 284
Target Start/End: Original strand, 13422414 - 13422500
Alignment:
Q  197 aatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    |||||||||||||||||||| ||||||||||||||||||  |||||||||         |||||||||||||||||||||||||||||    
T  13422414 aatatattgaattgagagtgatgaaagtaatattaattatagttataatt-aaaaataataattaatattgtattgaaaagtgaaatg 13422500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 284
Target Start/End: Complemental strand, 20189958 - 20189851
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaa 276  Q
    |||||||||||  ||||| |||||||||||||||||| || ||||||||||||||||||  |||||||  |        |||||||||||||||| ||||    
T  20189958 ttatcataaatgtaaagtggaatatattgaattgagaatgatgaaagtaatattaattagagttataaagggaaaaaaataattaatattgtattaaaaa 20189859  T
Q  277 gtgaaatg 284  Q
    ||||||||    
T  20189858 gtgaaatg 20189851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 343
Target Start/End: Original strand, 35334569 - 35334742
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    |||||||||| |||||| ||||||||||||||| ||||| |||||||| |||||||||  |||||||  |        ||||||||  ||||||||||||    
T  35334569 tatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtagtattaattagagttataaaaggaaaaaaataattaatgatgtattgaaaag 35334668  T
Q  278 tgaaatgggtcaatt------ggacaatattttt--gtgaaaatggctcagttattatgggactgagagagtat 343  Q
    |||||||| ||| ||      ||||| | |||||   |||||||| ||||||||||||||||| ||||||||||    
T  35334669 tgaaatggctcacttattttgggacacttttttttattgaaaatgactcagttattatgggacggagagagtat 35334742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 283
Target Start/End: Complemental strand, 41184200 - 41184077
Alignment:
Q  161 tattggtgcattctct-ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaat 259  Q
    |||||| ||||||||  |||||||| ||| ||||| ||||| ||| |||||||| || ||||||||||||||||||  ||||||| ||       |||||    
T  41184200 tattggggcattctccattatcatagatttaaagtggaataaattaaattgagaatgatgaaagtaatattaattagagttataaatgaaaaaatgtaat 41184101  T
Q  260 taatattgtattgaaaagtgaaat 283  Q
    ||||||||||||||||||| ||||    
T  41184100 taatattgtattgaaaagtaaaat 41184077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 87 - 284
Target Start/End: Complemental strand, 858491 - 858294
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataa 185  Q
    |||||||||||| |||||||||||  ||||| | | || |||||| |||||||| ||  |||   ||| | || ||||||| |||||||  |||||||||    
T  858491 ctcatttcacacatattaagaaaaa-tgtataaataaaggagagaaaaaaatggttttaagttatcttgttaaatattggtacattctccattatcataa 858393  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    || |||| |  |||||||| ||||||||||| |||||||| |||||||||  |||||||  |       ||||||||||||||||||||| ||||||||    
T  858392 atgcaaaatgaaatatatttaattgagagtgatgaaagtagtattaattagagttataaaggtaaaaaagtaattaatattgtattgaaatgtgaaatg 858294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 88 - 244
Target Start/End: Complemental strand, 6610992 - 6610836
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataaa 186  Q
    ||||||||||   ||||||||||  ||||| | |||| |||||||||||||| |||  ||||   |||| || |||||||||||||||   |||||||||    
T  6610992 tcatttcacatagattaagaaaaa-tgtatcaatgaaggagagagaaaaatgagtttaagtgtttttattaagtattggtgcattctccactatcataaa 6610894  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |  |||||  |||||||||||||  ||||| ||||||||||||||||||| |||||||    
T  6610893 tgtaaagtgaaatatattgaattcggagtgatgaaagtaatattaattaaagttataa 6610836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 244
Target Start/End: Original strand, 8369721 - 8369805
Alignment:
Q  161 tattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||||||||||   |||||||||| |||||| |||||||||||||||| ||| ||||||||| |||||||||  |||||||    
T  8369721 tattggtgcattctccactatcataaatgcaaagtggaatatattgaattgaaagttgtgaaagtagtattaattagagttataa 8369805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 15254830 - 15254762
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    |||||| ||| |||| |||||||||||||||||| |||| ||||||||||||||||||  |||||||||    
T  15254830 tatcattaatgcaaattagaatatattgaattgaaagtgatgaaagtaatattaattagagttataatt 15254762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 247
Target Start/End: Original strand, 17741160 - 17741285
Alignment:
Q  127 agagagaaaaatgggttagagtgcccttatcaactattggtgcattctcttt--atcataaattcaaagtagaatata---ttgaattgagagtggtgaa 221  Q
    |||||||||||| | || ||||||| || | || ||||| |||||||| |||  |||||||||  |||||| ||||||   |||||||||||||| ||||    
T  17741160 agagagaaaaatagttttgagtgcctttgttaagtattgatgcattctttttttatcataaatgtaaagtataatatagtattgaattgagagtgatgaa 17741259  T
Q  222 agtaatattaattaatgttataattg 247  Q
    ||||||||||||||  ||||||||||    
T  17741260 agtaatattaattatagttataattg 17741285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 43525555 - 43525475
Alignment:
Q  166 gtgcattctctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    ||||||||| ||||||||||||  |||||| ||||| ||||||||  ||||||||||||| |||||||||  |||||||||    
T  43525555 gtgcattctttttatcataaatgtaaagtataatatgttgaattggaagtggtgaaagtagtattaattagagttataatt 43525475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 284
Target Start/End: Original strand, 35646114 - 35646238
Alignment:
Q  161 tattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaat 259  Q
    |||||||||||||||   |||||||||| |||||| ||||||||||||||   ||| ||||||||| |||||||||  |||||||  |       |||||    
T  35646114 tattggtgcattctccactatcataaatgcaaagtggaatatattgaattagaagttgtgaaagtagtattaattagagttataaaaggaaaaaagtaat 35646213  T
Q  260 taatattgtattgaaaagtgaaatg 284  Q
    |||||| ||||||||||||||||||    
T  35646214 taatatcgtattgaaaagtgaaatg 35646238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 16283612 - 16283698
Alignment:
Q  161 tattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    |||||||||||||||   |||||||||| |||||| ||||||||||||||||||||| ||||||||  || |||||  |||||||||    
T  16283612 tattggtgcattctcaactatcataaatgcaaagtggaatatattgaattgagagtgatgaaagtagcatcaattagagttataatt 16283698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 25344780 - 25344838
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    |||||||||||  |||||||||||||||||||||||| || |||||||| |||||||||    
T  25344780 ttatcataaatgtaaagtagaatatattgaattgagaatgatgaaagtagtattaatta 25344838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 90 - 284
Target Start/End: Complemental strand, 25814517 - 25814323
Alignment:
Q  90 atttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataaatt 188  Q
    ||||||||| |||||||||||  || || | |||| ||||||||||||| | ||  ||||| ||| | || ||||||| |||| ||   ||||||||||     
T  25814517 atttcacacgtattaagaaaaa-tgcataaatgaaggagagagaaaaatagttttaagtgcacttgttaagtattggtacattatccactatcataaatg 25814419  T
Q  189 caaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
     |||||  ||||||||||||||  | || ||| ||||||||||||||| |||||||  |       ||||||||||||||||||||||||||||||    
T  25814418 taaagtgaaatatattgaattggaaatgatgagagtaatattaattaaagttataaaaggaaaaaagtaattaatattgtattgaaaagtgaaatg 25814323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 284
Target Start/End: Complemental strand, 13135818 - 13135712
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    |||||||||| |||||| ||||||||||||||  ||||| |||||||| || ||||||| |||||||  |        || |||||||||||||||||||    
T  13135818 tatcataaatgcaaagtggaatatattgaattaggagtgatgaaagtagtagtaattaaagttataaagggaaaaaaatatttaatattgtattgaaaag 13135719  T
Q  278 tgaaatg 284  Q
    |||||||    
T  13135718 tgaaatg 13135712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 284
Target Start/End: Original strand, 14184104 - 14184198
Alignment:
Q  191 aagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnn-gtaattaatattgtattgaaaagtgaaatg 284  Q
    ||||| |||||||||||||||||||  ||||| | ||||||||||  ||||||||||        ||||||||||||||||||||||||||||||    
T  14184104 aagtataatatattgaattgagagtaatgaaaatgatattaattatagttataattggaaaaaaagtaattaatattgtattgaaaagtgaaatg 14184198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 17699398 - 17699329
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    ||||||||||  || ||| |||||||||||||||||||  |||||||| |||||||||| ||||||||||    
T  17699398 tatcataaatgtaaggtataatatattgaattgagagtaatgaaagtagtattaattaaagttataattg 17699329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 31956796 - 31956727
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    |||||||||||  ||||| ||||||||||| ||||||||| | ||||||||||||||||  |||||||||    
T  31956796 ttatcataaatgtaaagttgaatatattgagttgagagtgataaaagtaatattaattagagttataatt 31956727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 32659882 - 32659778
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaa 276  Q
    |||| |||||| ||||||| ||||||||||||||||| |||| ||||||||||| ||||  |||||||| |        |||||||||||||||||||||    
T  32659882 ttattataaatgcaaagtataatatattgaattgagactggtaaaagtaatatttattagagttataatcgaaaaaa--taattaatattgtattgaaaa 32659785  T
Q  277 gtgaaat 283  Q
    || ||||    
T  32659784 gtaaaat 32659778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 36446730 - 36446787
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    |||||||||| ||||||| ||||||||||||||| |||| |||||||| |||||||||    
T  36446730 tatcataaatgcaaagtataatatattgaattgaaagtgatgaaagtagtattaatta 36446787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 100 - 246
Target Start/End: Original strand, 16883894 - 16884042
Alignment:
Q  100 tattaagaaaaggtgtatgagtgaaagagagagaaaaatgggtta-gagtgcccttatcaactattggtgcattctct-ttatcataaattcaaagtaga 197  Q
    |||||||||||  | |||||||||||||||||||||||   |||  |||||  ||| | ||  ||| |||||||| || |||||||||||  |||||| |    
T  16883894 tattaagaaaaaatttatgagtgaaagagagagaaaaaacagttttgagtgttcttgttaagcatttgtgcattcactattatcataaatgtaaagtaaa 16883993  T
Q  198 atatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    ||||||||||||  | |||||||||||| |||||||||  |||||||||    
T  16883994 atatattgaattaggggtggtgaaagtagtattaattagagttataatt 16884042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 284
Target Start/End: Original strand, 8692843 - 8692967
Alignment:
Q  161 tattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaat 259  Q
    |||||||||||||||   |||||||||| |||| |  |||||||| |||||  ||| |||||||||||||||||||  |||||||  |       |||||    
T  8692843 tattggtgcattctccactatcataaatgcaaaatgaaatatattaaattggaagttgtgaaagtaatattaattagagttataaaggaaaaaaagtaat 8692942  T
Q  260 taatattgtattgaaaagtgaaatg 284  Q
    ||||||||||||||||| |||||||    
T  8692943 taatattgtattgaaaaatgaaatg 8692967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 36469119 - 36469194
Alignment:
Q  161 tattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    |||||||||||||||   |||||||||| ||||||| ||||||||||||| | |||| |||||||| |||||||||    
T  36469119 tattggtgcattctccactatcataaatgcaaagtataatatattgaattaaaagtgatgaaagtagtattaatta 36469194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 42158688 - 42158746
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    ||||||||||| ||||||| ||||| |||||||||||  | ||||||||||||||||||    
T  42158688 ttatcataaatgcaaagtaaaatatgttgaattgagaaagatgaaagtaatattaatta 42158746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 146748 - 146797
Alignment:
Q  183 taaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaa 232  Q
    ||||| |||||||||||||||||||||||||||| | |||||| ||||||    
T  146748 taaatgcaaagtagaatatattgaattgagagtgataaaagtagtattaa 146797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 9426673 - 9426710
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    |||||||||||||||||||||||||||||| |||||||    
T  9426673 gtaattaatattgtattgaaaagtgaaatgagtcaatt 9426710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 13598017 - 13597980
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    |||||||||||||||||||||||||||||| |||||||    
T  13598017 gtaattaatattgtattgaaaagtgaaatgagtcaatt 13597980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 16954947 - 16954898
Alignment:
Q  161 tattggtgcattctctttatcataaattcaaagtagaatatattgaattg 210  Q
    |||||||||||||| ||||||||||||  ||| |||||||||||||||||    
T  16954947 tattggtgcattctttttatcataaatgtaaaatagaatatattgaattg 16954898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 20369263 - 20369226
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    |||||||||||||||||||||||||||||| |||||||    
T  20369263 gtaattaatattgtattgaaaagtgaaatgagtcaatt 20369226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 285
Target Start/End: Complemental strand, 33012413 - 33012312
Alignment:
Q  184 aaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaat 283  Q
    ||||||||||| |||||||| |||||| ||||| |||||||| |||||| ||  |||||||          ||||||||||||| |||||||||||||||    
T  33012413 aaattcaaagtggaatatatagaattgggagtgatgaaagtagtattaactagcgttataaagagaaaaaagtaattaatattgcattgaaaagtgaaat 33012314  T
Q  284 gg 285  Q
    ||    
T  33012313 gg 33012312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 283
Target Start/End: Complemental strand, 33988265 - 33988160
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    ||||||||||  ||||| ||||||||||||||| ||||  |||||||||||| |||||  |||||||  |       |||||||||  ||||||||||||    
T  33988265 tatcataaatgtaaagtggaatatattgaattgggagtaatgaaagtaatatgaattagagttataaagggaaacaagtaattaatgatgtattgaaaag 33988166  T
Q  278 tgaaat 283  Q
    ||||||    
T  33988165 tgaaat 33988160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 42211398 - 42211342
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatt 234  Q
    |||||||||| ||||||  |||||||||||||| ||||| |||||||| ||||||||    
T  42211398 tatcataaatgcaaagtgaaatatattgaattgtgagtgatgaaagtagtattaatt 42211342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 24534618 - 24534562
Alignment:
Q  227 tattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaat 283  Q
    ||||||||| |||||||||||       |||||||||||||||||||||||||||||    
T  24534618 tattaattagtgttataattgaaaaaaagtaattaatattgtattgaaaagtgaaat 24534562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 244
Target Start/End: Original strand, 7179527 - 7179589
Alignment:
Q  182 ataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||| ||||||||||||||||||||||||| || ||| ||||  ||||||||  |||||||    
T  7179527 ataaatgcaaagtagaatatattgaattgagaatgatgagagtagcattaattagagttataa 7179589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 278
Target Start/End: Complemental strand, 22983010 - 22982912
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaa 276  Q
    ||||||||||| ||||||| |||||    ||||||||||| |||||||| |||||||| | ||||||||||        |||||| ||||||||||||||    
T  22983010 ttatcataaatgcaaagtaaaatatt---aattgagagtgatgaaagtagtattaattgaagttataattgaaaaaaaataattattattgtattgaaaa 22982914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 35666951 - 35666893
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    |||| |||||| ||||||||||||||||||  |||||||| ||||| || |||||||||    
T  35666951 ttattataaatacaaagtagaatatattgatgtgagagtgatgaaaatattattaatta 35666893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 41268404 - 41268334
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    |||||||| || |||| ||  ||||||||||||  ||||| ||||||||||||||||||  ||||||||||    
T  41268404 ttatcatatatgcaaattatgatatattgaatttggagtgatgaaagtaatattaattatagttataattg 41268334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 284
Target Start/End: Complemental strand, 4412371 - 4412342
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatg 284  Q
    ||||||||||||||||||||||||||||||    
T  4412371 gtaattaatattgtattgaaaagtgaaatg 4412342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 6735400 - 6735457
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    |||||||||| |||||| ||||||||| ||||   |||| ||||||||||||||||||    
T  6735400 tatcataaatgcaaagtggaatatattaaatttgaagtgatgaaagtaatattaatta 6735457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 19889879 - 19889916
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  19889879 gtaattaatattgtattggaaagtgaaataggtcaatt 19889916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 38978743 - 38978706
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  38978743 gtaattgatattgtattgaaaagtgaaatggatcaatt 38978706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 39212677 - 39212714
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  39212677 gtaattaatattgcattgaaaagtggaatgggtcaatt 39212714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 284
Target Start/End: Complemental strand, 15814650 - 15814622
Alignment:
Q  256 taattaatattgtattgaaaagtgaaatg 284  Q
    |||||||||||||||||||||||||||||    
T  15814650 taattaatattgtattgaaaagtgaaatg 15814622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 284
Target Start/End: Complemental strand, 39008116 - 39008088
Alignment:
Q  256 taattaatattgtattgaaaagtgaaatg 284  Q
    |||||||||||||||||||||||||||||    
T  39008116 taattaatattgtattgaaaagtgaaatg 39008088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 4e-72; HSPs: 91)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 83 - 341
Target Start/End: Complemental strand, 13222229 - 13221965
Alignment:
Q  83 ttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatc 181  Q
    |||||| |||||||||||||||||||||  ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||    
T  13222229 ttgacttatttcacacttattaagaaaaaatgtataagtgaaagagagagaaaaatgggtttgagtgcccttatcaactattggtgtattcttctttatc 13222130  T
Q  182 ataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaa 281  Q
    |||||| ||||||| ||||||||||||||  ||||||||||||||||||||||| |||||||||||        ||||||||||||||||||||||||||    
T  13222129 ataaatgcaaagtaaaatatattgaattggaagtggtgaaagtaatattaattagtgttataattgaaaaaaaataattaatattgtattgaaaagtgaa 13222030  T
Q  282 atgggtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagt 341  Q
    || ||||||||      ||||||||||||| || ||||| ||||||||||||||||| ||| ||||    
T  13222029 at-ggtcaatttttatgggacaatatttttttgcaaatgactcagttattatgggacggagggagt 13221965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 83 - 342
Target Start/End: Original strand, 6972487 - 6972756
Alignment:
Q  83 ttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatc 181  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||||||||| ||| || |||||||||||||||||||| ||||||||| |||||||    
T  6972487 ttgactcatttcacacttattaagaaaaaatgtataagtgaaagagagagaaaa-tggttttgagtgcccttatcaactatttgtgcattcttctttatc 6972585  T
Q  182 ataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg----nnnnnnngtaattaatattgtattgaaaag 277  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||           |||||||||||||||||||||||    
T  6972586 ataaatgcaaagtagaatatattgaattgagagtggtaaaagtaatattaattagtgttataattgaagaaaaaaaagtaattaatattgtattgaaaag 6972685  T
Q  278 tgaaatgggtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagta 342  Q
    |||||||| | ||||      |||||||||||||  | ||||||||| ||||||| ||||| ||| |||||    
T  6972686 tgaaatggataaatttttctgggacaatattttttagcaaatggctcggttattacgggacggagggagta 6972756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 123 - 344
Target Start/End: Complemental strand, 31348632 - 31348404
Alignment:
Q  123 aaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataaattcaaagtagaatatattgaattgagagtggtgaa 221  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||| || ||||||||||||||||||  || |||||||    
T  31348632 aaagagagagaaaaatgggtttgagtgcccttatcaactattggtgcattcttttttatcataaatgcatagtagaatatattgaattaggaatggtgaa 31348533  T
Q  222 agtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaatt------ggacaatatttttgtgaaaatgg 315  Q
    |||| ||||||||| |||||||||||       |||||||||||||||||||||| |||||||||||||||      ||||||||||||| || ||||||    
T  31348532 agtagtattaattagtgttataattggaaaaaagtaattaatattgtattgaaaattgaaatgggtcaatttttctaggacaatatttttttgcaaatgg 31348433  T
Q  316 ctcagttattatgggactgagagagtata 344  Q
    ||||||||||||||||| ||| |||||||    
T  31348432 ctcagttattatgggacggagggagtata 31348404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 83 - 332
Target Start/End: Complemental strand, 314588 - 314340
Alignment:
Q  83 ttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatc 181  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||| || ||||||||||||||||||||| ||||||| ||||||||    
T  314588 ttgactcatttcacacttattaagaaaaagtgtataagtgaaagagagaggaaaatggttttgagtgcccttatcaactattgatgcattcttctttatc 314489  T
Q  182 ataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt-gnnnnnnngtaattaatattgtattgaaaagtga 280  Q
    |||||| ||||||||||||||||||||         |||||||| |||||||||||||||||||| |        |||||||||||||||||||||||||    
T  314488 ataaatgcaaagtagaatatattgaat---------tgaaagtagtattaattaatgttataattggaaaaaaaataattaatattgtattgaaaagtga 314398  T
Q  281 aatgggtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggac 332  Q
    ||||| ||||||      ||||||||||||| || ||||| |||||||||||||||||    
T  314397 aatggatcaatttttctaggacaatatttttttgcaaatgactcagttattatgggac 314340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 83 - 247
Target Start/End: Complemental strand, 2048452 - 2048288
Alignment:
Q  83 ttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctc-tttatc 181  Q
    ||||||||||||||||||||||| ||||  ||||| |||||||||||||||||||||| |  |||||| |||||||||||||||||||||||  ||||||    
T  2048452 ttgactcatttcacacttattaaaaaaaa-tgtataagtgaaagagagagaaaaatggttatgagtgctcttatcaactattggtgcattcttgtttatc 2048354  T
Q  182 ataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    |||||| ||||||||||||||||||||||||||| |||||| ||||||||||||  ||||||||||    
T  2048353 ataaatgcaaagtagaatatattgaattgagagtagtgaaaataatattaattagagttataattg 2048288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 80 - 247
Target Start/End: Original strand, 928482 - 928647
Alignment:
Q  80 cccttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tcttt 178  Q
    |||||| ||||||||||||||||||||||||   |||| ||||||||||| | ||||||||||| ||||||| ||||||||||||||||||||| |||||    
T  928482 cccttggctcatttcacacttattaagaaaaaacgtataagtgaaagagaaa-aaaaatgggtttgagtgcctttatcaactattggtgcattcttcttt 928580  T
Q  179 atcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||| |||||||||||    
T  928581 atcataaatgcaaaatagaatatatt--attgagagtggtgaaagtagtattaattagtgttataattg 928647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 87 - 332
Target Start/End: Complemental strand, 2427517 - 2427262
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataa 185  Q
    ||||||||| | |||||||||||| |||||| | ||| | | ||||||||||||||| || ||||||||| || |||||| ||||||| |||| ||||||    
T  2427517 ctcatttcatatttattaagaaaaagtgtataactgacatatagagaaaaatgggtttgaatgcccttattaattattggagcattcttctttgtcataa 2427418  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt-gnnnnnnngtaattaatattgtattgaaaa--gtgaaa 282  Q
    || |||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||| |       |||||||||||| |||||||||  ||||||    
T  2427417 atgcaaagtagaatatattgaattgggagtggtgaaagtagtattaattgatgttataattggaaaaaaagtaattaatattatattgaaaagtgtgaaa 2427318  T
Q  283 tgggtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggac 332  Q
    | ||||||||      ||||||||||||| || ||||| |||||||||||||||||    
T  2427317 ttggtcaatttttttaggacaatatttttttgcaaatgactcagttattatgggac 2427262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 91 - 329
Target Start/End: Complemental strand, 31592703 - 31592459
Alignment:
Q  91 tttcacacttattaagaaaag-gtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaatt 188  Q
    |||||||| |||||| ||||  |||||| |||||||||||||||||||| | || ||||| | || |||| ||||| |||||||| | |||||||||||     
T  31592703 tttcacacatattaataaaaaagtgtataagtgaaagagagagaaaaatagtttcgagtgtc-ttgtcaagtattgctgcattctttcttatcataaata 31592605  T
Q  189 caaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtc 288  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||       ||||||| |||||||||||||||||||||| |||    
T  31592604 caaagtagaatatattgaattgagagtgatgaaaataatattaattaaagttataattg-gaaaaagtaattattattgtattgaaaagtgaaatgagtc 31592506  T
Q  289 aatt------ggacaatatttttgtgaaaatggctcagttattatgg 329  Q
    ||||      |||||||||| || || ||||| ||||||||||||||    
T  31592505 aatttttttgggacaatattattttgcaaatgactcagttattatgg 31592459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 89 - 329
Target Start/End: Complemental strand, 9472576 - 9472330
Alignment:
Q  89 catttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaat 187  Q
    |||||||||| |||||||||||  ||||| | ||||||||| |||| ||||| |||||||| | || |||| ||||| | |||||| |||||||||||||    
T  9472576 catttcacacatattaagaaaaa-tgtataaatgaaagagatagaacaatggtttagagtgtctttgtcaagtattgatacattcttctttatcataaat 9472478  T
Q  188 tcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggt 287  Q
      | |||||||||||||||||||| ||||||||||||| |||||||||  ||||||||||       || |||||| |||||||||||||||||||||||    
T  9472477 gtatagtagaatatattgaattgatagtggtgaaagtagtattaattatagttataattgaaaaaaagtgattaatgttgtattgaaaagtgaaatgggt 9472378  T
Q  288 caat------tggacaatatttttgtgaaaatggctcagttattatgg 329  Q
     |||      |||||||||||||| |  ||||| ||||||||||||||    
T  9472377 taatattctctggacaatatttttttacaaatgactcagttattatgg 9472330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 87 - 284
Target Start/End: Complemental strand, 7213631 - 7213434
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataa 185  Q
    ||||||||||||  ||||||||||  ||||| | ||||| |||||||||||||  || ||||||| ||||||| |||||||||||||| |||||| ||||    
T  7213631 ctcatttcacacagattaagaaaaa-tgtataaatgaaatagagagaaaaatgattttgagtgcctttatcaaatattggtgcattcttctttattataa 7213533  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    ||  ||||| |||||||||||||||||||| ||||||||| |||||||||  |||||||  |       ||||||||||||||||||||||||||||||    
T  7213532 atgtaaagtggaatatattgaattgagagttgtgaaagtagtattaattagagttataaaagggaaaaagtaattaatattgtattgaaaagtgaaatg 7213434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 24356265 - 24356064
Alignment:
Q  89 catttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaat 187  Q
    ||||||||||  ||||||||||| ||||| |  ||||||||||||||| | | || ||||||| || |||| ||||| |||||||| |||||||||||||    
T  24356265 catttcacacagattaagaaaag-tgtataaaggaaagagagagaaaactagttttgagtgcctttttcaagtattgatgcattcttctttatcataaat 24356167  T
Q  188 tcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggt 287  Q
      |||||||||||| |||||||| |||| ||||||||| |||||||||  ||||||||||       ||||||||| |||||||||||||||||||||||    
T  24356166 gtaaagtagaatatgttgaattgggagtcgtgaaagtagtattaattagagttataattgaaaaaaagtaattaatgttgtattgaaaagtgaaatgggt 24356067  T
Q  288 caa 290  Q
    |||    
T  24356066 caa 24356064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 83 - 247
Target Start/End: Original strand, 43427033 - 43427197
Alignment:
Q  83 ttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaa-ctattggtgcattct-ctttat 180  Q
    ||||||||||||| |||| ||||||||| |||||| | |||||||||||  ||||| |||| |||||||||| | || ||||| ||||||||| ||||||    
T  43427033 ttgactcatttcatactttttaagaaaaagtgtataaatgaaagagaga--aaaataggtttgagtgcccttgtgaaactattagtgcattcttctttat 43427130  T
Q  181 cataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    ||||||| |||| ||||||||||||||||| ||||| |||||||| ||||||||| |||||||||||    
T  43427131 cataaatgcaaaatagaatatattgaattgggagtgatgaaagtagtattaattagtgttataattg 43427197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 87 - 292
Target Start/End: Complemental strand, 9725034 - 9724832
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataa 185  Q
    |||||||||||| |||||||||||| ||||| | ||||||||||||| |||||  || ||||||  ||||||| |||||||||||||| |||||||||||    
T  9725034 ctcatttcacacatattaagaaaag-tgtataaatgaaagagagagagaaatgattttgagtgcttttatcaagtattggtgcattcttctttatcataa 9724936  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgg 285  Q
    ||  ||||||||||||||||||||  | | |||||||||| |||||||||  |||||||  |       |||||||||||||||||||||||||||||||    
T  9724935 atgtaaagtagaatatattgaatt--ggggggtgaaagtagtattaattagagttataa-agaaaaaaagtaattaatattgtattgaaaagtgaaatgg 9724839  T
Q  286 gtcaatt 292  Q
     ||||||    
T  9724838 ctcaatt 9724832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 88 - 332
Target Start/End: Original strand, 37529023 - 37529271
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaa 186  Q
    |||||||||||||||||| ||||  | ||| ||| || || |||||||||||| || ||||| | || | || |||||||  ||| | ||||||||||||    
T  37529023 tcatttcacacttattaaaaaaaa-tatattagtaaaggatagagaaaaatggttttgagtgtctttgttaagtattggtctatttttctttatcataaa 37529121  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatggg 286  Q
    |  ||||||||||| |||||||||  |||||||||||||||||||||||  ||||||||||       |||||||||||||||||| |||||||||| ||    
T  37529122 tgtaaagtagaataaattgaattggaagtggtgaaagtaatattaattagagttataattgaaaaaaagtaattaatattgtattggaaagtgaaattgg 37529221  T
Q  287 tcaatt-----ggacaatatttttgtgaaaatggctcagttattatgggac 332  Q
    ||||||     ||||||||||||| |||||||  |||||||||||||||||    
T  37529222 tcaattttttaggacaatattttt-tgaaaataactcagttattatgggac 37529271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 99 - 342
Target Start/End: Original strand, 4282980 - 4283232
Alignment:
Q  99 ttattaagaaaag-gtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcatt-ctctttatcataaattcaaagtag 196  Q
    ||||||||||||  |||||| ||| |||||||||||||||||| || || |||||||||||| |||||||||||| |||||||||||||||  ||| |||    
T  4282980 ttattaagaaaaaagtgtataagtaaaagagagagaaaaatggttttgaatgcccttatcaagtattggtgcattcctctttatcataaatgtaaaatag 4283079  T
Q  197 aatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngta--attaatattgtattgaaaagtgaaatgggtcaatt-- 292  Q
    |||||||||||||||||||||| |||||| ||| |||||  ||| ||||||         |  ||||||||||||||||||| |||||||  ||||||      
T  4283080 aatatattgaattgagagtggtaaaagtagtataaattagagttgtaattgaaaaaaaaaagtattaatattgtattgaaaattgaaatgaatcaatttt 4283179  T
Q  293 ---ggacaatatttttgtgaaaatggctcagttattatgggactgagagagta 342  Q
       |||| ||| |||| ||||||| ||||| |||||||||||| ||| |||||    
T  4283180 ttcggactatagttttttgaaaattgctcacttattatgggacggagggagta 4283232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 87 - 292
Target Start/End: Original strand, 38872872 - 38873076
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcatt-ctctttatcataa 185  Q
    ||||||||| |||||||||||||| |||||  |||| |||||| | |||||||| || ||||| ||||||||||||||| |||||| |||||||||||||    
T  38872872 ctcatttcatacttattaagaaaaagtgtaaaagtggaagagaaaaaaaaatggttttgagtgtccttatcaactattgatgcattcctctttatcataa 38872971  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgg 285  Q
    ||  |||||  |||||||||||||| |||||||||||||| |||   |||  |||||||| |       ||||||||||||||||| |||| |||||||     
T  38872972 atataaagt--aatatattgaattgggagtggtgaaagtagtatcggttagagttataatcggaaaaaagtaattaatattgtattaaaaaatgaaatga 38873069  T
Q  286 gtcaatt 292  Q
    |||||||    
T  38873070 gtcaatt 38873076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 3200049 - 3199895
Alignment:
Q  90 atttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctttatcataaattc 189  Q
    |||||| | ||||||||||||| ||||| | |||||||||||||||||||| || ||||| | || | ||||||| ||||||| |  ||||||||||| |    
T  3200049 atttcatatttattaagaaaagatgtataaatgaaagagagagaaaaatggttttgagtgtcattgttaactatttgtgcatttt--ttatcataaatgc 3199952  T
Q  190 aaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    |||||| |||||||||||||| |||||||||||||| |||||||||  |||||||||    
T  3199951 aaagtataatatattgaattgggagtggtgaaagtagtattaattagagttataatt 3199895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 156 - 290
Target Start/End: Original strand, 7931515 - 7931650
Alignment:
Q  156 tcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnn 254  Q
    |||| |||| ||||||||| |||||||||||||  |||||| ||||||||||||||||||| ||||||||| |||||||||  ||||||||||           
T  7931515 tcaagtattagtgcattcttctttatcataaatgtaaagtaaaatatattgaattgagagttgtgaaagtagtattaattagagttataattgaaaaaaa 7931614  T
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaa 290  Q
    ||||||||| ||||||||||||||||||||||||||    
T  7931615 gtaattaatgttgtattgaaaagtgaaatgggtcaa 7931650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 121 - 290
Target Start/End: Original strand, 1908478 - 1908648
Alignment:
Q  121 tgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtg 219  Q
    ||||| |||||||||||||| || ||||| | ||  ||| |||| ||||||||| |||||||||||||  |||||||||||||||||||||  |||||||    
T  1908478 tgaaatagagagaaaaatggttttgagtgtcttttgcaagtattagtgcattcttctttatcataaatgtaaagtagaatatattgaattggaagtggtg 1908577  T
Q  220 aaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaa 290  Q
    ||| ||||||||||||  ||||||||||       ||||||||| |||||||||||| |||||||| ||||    
T  1908578 aaaataatattaattagagttataattgaaaaaaagtaattaatgttgtattgaaaattgaaatggatcaa 1908648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 91 - 342
Target Start/End: Original strand, 18181168 - 18181426
Alignment:
Q  91 tttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataaattc 189  Q
    ||||||||  ||||||||||| ||||| ||||| |||||||||||||||| ||  |||||  || | |  |||||||||||||||   |||||||||| |    
T  18181168 tttcacacagattaagaaaag-tgtataagtgagagagagagaaaaatggttttaagtgcttttgttatgtattggtgcattctccactatcataaatgc 18181266  T
Q  190 aaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt-gnnnnnnngtaattaatattgtattgaaaagtgaaatgggtc 288  Q
    |||||||||||| |||||||| || |  |||||||| |||||||||  ||||||||| |        |||||||||||||||||||||||||||||||||    
T  18181267 aaagtagaatattttgaattgggaataatgaaagtagtattaattagagttataattagaaaaaaaataattaatattgtattgaaaagtgaaatgggtc 18181366  T
Q  289 aatt------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagta 342  Q
    | ||      ||||||||||||| |  |||  |||||||||||||||||| ||| |||||    
T  18181367 agttattttaggacaatatttttctacaaaaagctcagttattatgggacggagggagta 18181426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 89 - 247
Target Start/End: Complemental strand, 18460642 - 18460484
Alignment:
Q  89 catttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaat 187  Q
    ||||||||||  ||||||||||| ||||| | ||||||||| |||||||||  || ||||| | || |||| ||||||| |||||| |||| ||||||||    
T  18460642 catttcacacagattaagaaaag-tgtataaatgaaagagatagaaaaatgattttgagtgtctttgtcaaatattggtacattcttctttgtcataaat 18460544  T
Q  188 tcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
      |||||||||||||||||||||||||| ||  |||||||||||||||  ||||||||||    
T  18460543 gtaaagtagaatatattgaattgagagttgtagaagtaatattaattagagttataattg 18460484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 284
Target Start/End: Original strand, 10069536 - 10069733
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataa 185  Q
    ||||||||||||| ||||||||||  | ||| ||||||||||||| |||||||  ||  ||| |  || |||| |||| |||||||  |  |||||||||    
T  10069536 ctcatttcacactcattaagaaaaa-tatataagtgaaagagagataaaaatgattttaagtacttttgtcaagtatttgtgcatttaccattatcataa 10069634  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    || |||||| ||||||||||||||||||||| |||||||| |||||||||  ||||| ||||       ||||||||||||| ||||||||||||||||    
T  10069635 atgcaaagtcgaatatattgaattgagagtgatgaaagtattattaattagagttatcattgtaaaaaagtaattaatattgcattgaaaagtgaaatg 10069733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 246
Target Start/End: Original strand, 8550593 - 8550752
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataa 185  Q
    ||||||||||||  ||| ||||||  ||||| |||||||||||||||||| ||| ||  ||||  ||| |||| |||| ||||||||||  |||||||||    
T  8550593 ctcatttcacacacatttagaaaaa-tgtataagtgaaagagagagaaaagtggttttaagtgttcttgtcaagtatttgtgcattctccattatcataa 8550691  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    || ||||||  ||||||||||||| |||||| |||||||| |||||||||  |||||||||    
T  8550692 atgcaaagtctaatatattgaattaagagtgatgaaagtagtattaattatagttataatt 8550752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 225
Target Start/End: Complemental strand, 36748302 - 36748166
Alignment:
Q  89 catttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaat 187  Q
    |||||||||| |||||||||||| ||||| |  |||| |||||||||||| | || |||| || || |||| ||||||||| || | |||||||||||||    
T  36748302 catttcacacatattaagaaaag-tgtataaaagaaatagagagaaaaatagttttgagttcctttttcaagtattggtgcgttattctttatcataaat 36748204  T
Q  188 tcaaagtagaatatattgaattgagagtggtgaaagta 225  Q
    | |||||| ||||||||||||||||| | |||||||||    
T  36748203 ttaaagtaaaatatattgaattgagaattgtgaaagta 36748166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 284
Target Start/End: Complemental strand, 41436144 - 41436038
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    |||||||||| |||||| |||||||||||||||||| || |||||||| |||||||||  |||||||  |       |||||||||||||||||||||||    
T  41436144 tatcataaatgcaaagtggaatatattgaattgagaatgatgaaagtagtattaattagagttataaaagggaaaaagtaattaatattgtattgaaaag 41436045  T
Q  278 tgaaatg 284  Q
    |||||||    
T  41436044 tgaaatg 41436038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 178 - 283
Target Start/End: Original strand, 5212000 - 5212105
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    |||||||||| |||||| |||||||||||||||| ||| ||||||||| ||||||||||  ||||||  |       |||||||||||||||||||||||    
T  5212000 tatcataaatgcaaagtggaatatattgaattgaaagttgtgaaagtagtattaattaaatttataaaggaaaaaaagtaattaatattgtattgaaaag 5212099  T
Q  278 tgaaat 283  Q
    ||||||    
T  5212100 tgaaat 5212105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 88 - 342
Target Start/End: Complemental strand, 5426014 - 5425752
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagaga--gagaaaaatgggttagagtgcccttatcaactattggtgca-ttctctttatcata 184  Q
    ||||||||||| ||||||||||| |||||| |||||||||||  ||||| ||| | || |||||   || |||| |||||||| | |||||  | |||||    
T  5426014 tcatttcacacgtattaagaaaaagtgtataagtgaaagagagagagaataatagttttgagtg-tattgtcaagtattggtgtatttctccctgtcata 5425916  T
Q  185 aattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    ||| | ||| |||||||||||||||| || || ||||| || ||||| |||   |||||||||       || |||||||||||||||||||||||||||    
T  5425915 aatgcgaagcagaatatattgaattgggaatgatgaaattagtattagttagatttataattggaaaaaagttattaatattgtattgaaaagtgaaatg 5425816  T
Q  285 ggtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagta 342  Q
     | || ||      ||||||||||||| || |||||||||| |||||||||||| ||| |||||    
T  5425815 agacagttttcttgggacaatatttttttgcaaatggctcacttattatgggacggagggagta 5425752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 177 - 283
Target Start/End: Complemental strand, 39095697 - 39095592
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaa 276  Q
    ||||||||||| |||||| |||||||||||||||  |||| ||||||||||||||||||| ||||||||||       ||||||||||||||||| ||||    
T  39095697 ttatcataaatgcaaagtggaatatattgaattgtcagtgatgaaagtaatattaattaaagttataattg-aaaaaagtaattaatattgtatttaaaa 39095599  T
Q  277 gtgaaat 283  Q
     ||||||    
T  39095598 atgaaat 39095592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 26273825 - 26273755
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    ||||||||||| |||||||||||||||||||||| ||||| |||||||| ||||||||||  |||||||||    
T  26273825 ttatcataaatgcaaagtagaatatattgaattgggagtgatgaaagtagtattaattaaatttataattg 26273755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 43182426 - 43182227
Alignment:
Q  89 catttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaat 187  Q
    ||||||||||  ||||||||||  ||||| |  |||||||||| ||||||   || ||||| | || |||| |||||||||||||| |||||| ||||||    
T  43182426 catttcacacagattaagaaaaa-tgtataaaggaaagagagaaaaaaataattttgagtgtctttgtcaaatattggtgcattcttctttattataaat 43182328  T
Q  188 tcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggt 287  Q
      |  ||| ||||||||||||||  |||||||||| || |||||||||| ||||||||||       ||||||||| |||||||||||| |||||||| |    
T  43182327 gta--gtataatatattgaattggaagtggtgaaaatagtattaattaaagttataattgaaaaaaagtaattaatgttgtattgaaaattgaaatggat 43182230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 284
Target Start/End: Complemental strand, 33880211 - 33880118
Alignment:
Q  190 aaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||  |||||||  |       ||||||||||||||||| ||||||||||||    
T  33880211 aaagtagaatatattgaattgggagtggtgaaagtaatattaattagagttataa-agggaaaaagtaattaatattgtattaaaaagtgaaatg 33880118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 247
Target Start/End: Original strand, 39166678 - 39166807
Alignment:
Q  119 agtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctcttt-atcataaattcaaagtagaatatattgaattgagagtgg 217  Q
    ||||||||||| |||||||||  || || ||||||||| || |||  || |||||| ||| |||||||||  |||||| |||||||||||||| |||| |    
T  39166678 agtgaaagagaaagaaaaatgattttgaatgcccttattaattatgtgtacattcttttttatcataaatgtaaagtataatatattgaattgggagtag 39166777  T
Q  218 tgaaagtaatattaattaatgttataattg 247  Q
    |||||||||||| |||||| || |||||||    
T  39166778 tgaaagtaatataaattaaagtcataattg 39166807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 285
Target Start/End: Complemental strand, 4794639 - 4794528
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt---gnnnnnnngtaattaatattgtattga 273  Q
    ||||||||||| |||||| |||||||||||||||| |||| |||||||| |||||||||  |||||||||   |        ||||||||||||||||||    
T  4794639 ttatcataaatgcaaagtggaatatattgaattgaaagtgatgaaagtagtattaattagagttataattggagaaaaaaattaattaatattgtattga 4794540  T
Q  274 aaagtgaaatgg 285  Q
    ||||||||||||    
T  4794539 aaagtgaaatgg 4794528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 28844128 - 28844056
Alignment:
Q  174 tctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    ||||||||||||||  |||||| ||||||||||||||||||||||||||||| |||| ||||  |||||||||    
T  28844128 tctttatcataaatgtaaagtataatatattgaattgagagtggtgaaagtattatttattagagttataatt 28844056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 235
Target Start/End: Complemental strand, 3487453 - 3487402
Alignment:
Q  184 aaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  3487453 aaatgcaaagtagaatatattgaattgagagtgatgaaagtaatattaatta 3487402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 244
Target Start/End: Original strand, 28108325 - 28108483
Alignment:
Q  86 actcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcata 184  Q
    ||||||||||||| |||||||||||  | ||| | |||| ||||||||||||| | ||  ||||| ||| | || |||||||||||||||   |||||||    
T  28108325 actcatttcacacgtattaagaaaaaat-tataaatgaaggagagagaaaaatagttttaagtgcacttgttaagtattggtgcattctccactatcata 28108423  T
Q  185 aattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
     ||  ||||| |||||||||||||||||| || |||||||| |||||||||  |||||||    
T  28108424 catgtaaagtggaatatattgaattgagaatgatgaaagtagtattaattagagttataa 28108483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 113 - 247
Target Start/End: Original strand, 44424241 - 44424374
Alignment:
Q  113 tgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaattcaaagtagaatatattgaattga 211  Q
    ||||| |||||||||||||||||| ||| || || || | || |||| ||||| |||||| | | ||||||||||| |||||| ||||||||||||||||    
T  44424241 tgtataagtgaaagagagagaaaa-tggttttgaatgtc-ttgtcaagtattgatgcattttttattatcataaatgcaaagttgaatatattgaattga 44424338  T
Q  212 gagtggtgaaagtaatattaattaatgttataattg 247  Q
    || || |||||||| |||||||||  ||||||||||    
T  44424339 gaatgatgaaagtagtattaattagagttataattg 44424374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 6213891 - 6213961
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    ||||||||||| |||||||||||||||| |||| |||||| |||||||| |||||||||| |||| |||||    
T  6213891 ttatcataaatgcaaagtagaatatattcaattaagagtgatgaaagtagtattaattaaagttaaaattg 6213961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 87 - 242
Target Start/End: Original strand, 435027 - 435184
Alignment:
Q  87 ctcatttcacacttattaagaaaagg-tgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcata 184  Q
    |||||||||||| |||||||||||   ||||| | ||||||||||| |||||| | ||  ||||| ||| | || |||| ||||||||||   |||||||    
T  435027 ctcatttcacacgtattaagaaaaatatgtataaatgaaagagagacaaaaatagttttaagtgcacttgttaaatattagtgcattctccactatcata 435126  T
Q  185 aattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttat 242  Q
    |||  |||||  ||||||||||||||||| || |||||||| |||||||||| |||||    
T  435127 aatgtaaagtgaaatatattgaattgagaatgatgaaagtagtattaattaaagttat 435184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 11726764 - 11726832
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    |||||||| | ||||||||||||||||||||| |||||| |||||||| ||||||||||  ||||||||    
T  11726764 tatcataattgcaaagtagaatatattgaattaagagtgatgaaagtagtattaattaaaattataatt 11726832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 235
Target Start/End: Original strand, 14384302 - 14384377
Alignment:
Q  161 tattggtgcattc-tctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    ||||||||||||| || |||||||||||  |||||| ||||||||||||||||||||  ||||||| |||||||||    
T  14384302 tattggtgcattcatcattatcataaatgtaaagtataatatattgaattgagagtgaagaaagtagtattaatta 14384377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 198
Target Start/End: Original strand, 38280148 - 38280258
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataaa 186  Q
    ||||||||||| |||||||||||  ||||| |  |||| |||||||||||||| || ||||||| || | || ||||||||||||| |||||||||||||    
T  38280148 tcatttcacacatattaagaaaaa-tgtataaaggaaatagagagaaaaatggttttgagtgccttttttaaatattggtgcattcttctttatcataaa 38280246  T
Q  187 ttcaaagtagaa 198  Q
    |  |||||||||    
T  38280247 tgtaaagtagaa 38280258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 189 - 342
Target Start/End: Complemental strand, 6075552 - 6075391
Alignment:
Q  189 caaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg--nnnnnnngtaattaatattgtattgaaaagtgaaatggg 286  Q
    |||||||||||||||| ||||| ||||| |||||||| |||||||||  ||||||||||          |||||| ||||||| ||||||||||||| |     
T  6075552 caaagtagaatatattaaattgggagtgatgaaagtagtattaattagagttataattggaaaaaaaaataattattattgtagtgaaaagtgaaataga 6075453  T
Q  287 tcaa------ttggacaatatttttgtgaaaatggctcagttattatgggactgagagagta 342  Q
    ||||      ||||||||||||||| || |||| ||||||||||||||| || ||| |||||    
T  6075452 tcaattttttttggacaatatttttttgcaaatagctcagttattatggaacggagggagta 6075391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 6723884 - 6723969
Alignment:
Q  161 tattggtgcattc-tctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    ||||||||||||| || |||||||||||  |||||||||| |||||||||| ||||| ||||||| ||||||||||  |||||||||    
T  6723884 tattggtgcattcctcattatcataaatataaagtagaatttattgaattg-gagtgatgaaagttatattaattagagttataatt 6723969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 292
Target Start/End: Complemental strand, 19515947 - 19515832
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaa 276  Q
    ||||||||||| ||||||| ||||||||||||||  |||  |||||||| |||||||||  ||||||||||       |||||| |||||||| ||||||    
T  19515947 ttatcataaatgcaaagtaaaatatattgaattgtaagtaatgaaagtagtattaattagagttataattggtaaaaagtaattgatattgtactgaaaa 19515848  T
Q  277 gtgaaatgggtcaatt 292  Q
     ||||||  |||||||    
T  19515847 atgaaatacgtcaatt 19515832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 23685024 - 23684958
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||||| ||||||  |||||||||||||||||||| |||||||| |||||||||  |||||||    
T  23685024 tatcataaatgcaaagtgaaatatattgaattgagagtgatgaaagtagtattaattagagttataa 23684958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 28301499 - 28301433
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||||| ||||||  |||||||||||||||||||| |||||||| |||||||||  |||||||    
T  28301499 tatcataaatgcaaagtgaaatatattgaattgagagtgatgaaagtagtattaattagagttataa 28301433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 29937955 - 29938013
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    ||||||||||| ||||||| ||||||||||||||||| || | ||||||||||||||||    
T  29937955 ttatcataaatacaaagtaaaatatattgaattgagaatgataaaagtaatattaatta 29938013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 37247926 - 37247992
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||||| ||||||  |||||||||||||||| ||| ||||||||||||||||||  |||||||    
T  37247926 tatcataaatgcaaagtgaaatatattgaattgagtgtgatgaaagtaatattaattagagttataa 37247992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 189 - 235
Target Start/End: Original strand, 38282476 - 38282522
Alignment:
Q  189 caaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  38282476 caaagtagaatatattaaattgggagtggtgaaagtaatattaatta 38282522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 284
Target Start/End: Complemental strand, 3100465 - 3100359
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    |||||||||| |||||| ||||||||| |||||  ||| ||||||||| |||||||||  |||| ||  |       |||||||||||||||||||||||    
T  3100465 tatcataaatgcaaagtggaatatattaaattggaagttgtgaaagtagtattaattagagttacaaagggaaaaaagtaattaatattgtattgaaaag 3100366  T
Q  278 tgaaatg 284  Q
    |||||||    
T  3100365 tgaaatg 3100359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 284
Target Start/End: Original strand, 31546060 - 31546166
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    ||||| |||| |||||| ||||||||| | || |||||| |||||||| |||| ||||  ||||||||||       ||||||||||||||||| |||||    
T  31546060 tatcacaaatgcaaagtggaatatatttagttaagagtgatgaaagtagtattgattagagttataattgaaaaaaagtaattaatattgtatttaaaag 31546159  T
Q  278 tgaaatg 284  Q
    |||||||    
T  31546160 tgaaatg 31546166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 112 - 215
Target Start/End: Complemental strand, 25604491 - 25604389
Alignment:
Q  112 gtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaattcaaagtagaatatattgaattg 210  Q
    |||||| |||||||||||||||||||| | || ||||| | || | || |||||||||||||| | ||||||||||| |||| |||||||||||||||||    
T  25604491 gtgtataagtgaaagagagagaaaaatagttttgagtgtc-ttgt-aagtattggtgcattctttcttatcataaatgcaaattagaatatattgaattg 25604394  T
Q  211 agagt 215  Q
     ||||    
T  25604393 ggagt 25604389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 171 - 247
Target Start/End: Complemental strand, 44024790 - 44024714
Alignment:
Q  171 ttctctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    ||||| ||||||||||| |||||||||||||||||| || ||| || ||||| || |||||||||  ||||||||||    
T  44024790 ttctcattatcataaatgcaaagtagaatatattgagttaagaatgatgaaaatagtattaattatagttataattg 44024714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 292
Target Start/End: Complemental strand, 8385147 - 8385027
Alignment:
Q  171 ttctctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtat 270  Q
    ||||| |||||||||||  ||| || ||||||||||| ||| | || ||||||||  | ||||||| ||||||||||       ||||||||||||||||    
T  8385147 ttctcattatcataaatgtaaaatataatatattgaactgaaaatgatgaaagtagaaataattaaagttataattgaaaaat-gtaattaatattgtat 8385049  T
Q  271 tgaaaagtgaaatgggtcaatt 292  Q
    |||||||||||||  |||||||    
T  8385048 tgaaaagtgaaataagtcaatt 8385027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 13026633 - 13026574
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaa 236  Q
    ||||||||||| || | || |||||||||||| ||||||| |||||||||||||||||||    
T  13026633 ttatcataaatgcataataaaatatattgaatcgagagtgatgaaagtaatattaattaa 13026574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 284
Target Start/End: Complemental strand, 24451895 - 24451742
Alignment:
Q  131 agaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatat 229  Q
    |||||||||| || ||||| | ||||  | ||||||| |||||| |||||||||||||  |  ||||||||||||| ||||  || ||||||||||||||    
T  24451895 agaaaaatggttttgagtgtctttattgaatattggttcattcttctttatcataaatgta--gtagaatatattgtattggaaggggtgaaagtaatat 24451798  T
Q  230 taattaatgttataattg-nnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    ||||||  ||||||||||         ||||||||||||||||| |||||||||||    
T  24451797 taattagagttataattgaaaaaaaaataattaatattgtattggaaagtgaaatg 24451742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 283
Target Start/End: Complemental strand, 4043394 - 4043319
Alignment:
Q  207 attgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaat 283  Q
    ||||||||||||||||| |||||||||||| ||||||||||       |||||||||||| ||||||||||| ||||    
T  4043394 attgagagtggtgaaagaaatattaattaaagttataattg-agaaaagtaattaatattatattgaaaagtaaaat 4043319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 235
Target Start/End: Complemental strand, 5711039 - 5711001
Alignment:
Q  197 aatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  5711039 aatatattgaattgagagtggtgaaagtagtattaatta 5711001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 276
Target Start/End: Complemental strand, 8031807 - 8031708
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaa 276  Q
    ||||||||||| ||||||  |||||||||||||| || || | |||||| |||||||||| |||||||  |       ||||||||||||||||||||||    
T  8031807 ttatcataaatgcaaagttaaatatattgaattgtgaatgataaaagtagtattaattaaagttataaaggagaaaaagtaattaatattgtattgaaaa 8031708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 190 - 292
Target Start/End: Complemental strand, 14887868 - 14887766
Alignment:
Q  190 aaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtca 289  Q
    |||||||||||||||||||||   ||||| | | || |||||||| | ||||||||||       ||||||||||||||||| |||| ||||||| ||||    
T  14887868 aaagtagaatatattgaattggttgtggtaataatagtattaattgaggttataattggaaaaaagtaattaatattgtattaaaaaatgaaatgagtca 14887769  T
Q  290 att 292  Q
    |||    
T  14887768 att 14887766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 284
Target Start/End: Original strand, 15859388 - 15859490
Alignment:
Q  182 ataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaa 281  Q
    |||||| ||||||  |||||||||||||   ||| ||||||||||| |||||||  |||||||  |       |||||||||||||||||||||||||||    
T  15859388 ataaatgcaaagtgaaatatattgaattagaagttgtgaaagtaatgttaattagagttataaagggaaaaaagtaattaatattgtattgaaaagtgaa 15859487  T
Q  282 atg 284  Q
    |||    
T  15859488 atg 15859490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 284
Target Start/End: Complemental strand, 28572291 - 28572170
Alignment:
Q  161 tattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaat 259  Q
    |||||||||||||||   |||||||||| |||| |  ||||||||||||||  ||| ||||||||| |||||||||  |||||||          |||||    
T  28572291 tattggtgcattctccactatcataaatgcaaaatgaaatatattgaattggaagttgtgaaagtagtattaattacagttataa---agagaaagtaat 28572195  T
Q  260 taatattgtattgaaaagtgaaatg 284  Q
    |||||||||||||||||||||||||    
T  28572194 taatattgtattgaaaagtgaaatg 28572170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 43427482 - 43427519
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    |||||||||||||||||||||||||||||| |||||||    
T  43427482 gtaattaatattgtattgaaaagtgaaatgagtcaatt 43427519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 734031 - 734107
Alignment:
Q  156 tcaactattggtgcattctct-ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatatta 231  Q
    |||| ||||||||||||| || |||||||||||  | |||| |||||||||| ||| ||||| ||||||||||||||    
T  734031 tcaaatattggtgcattcactattatcataaatgtatagtaaaatatattgagttgggagtgatgaaagtaatatta 734107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 6685706 - 6685762
Alignment:
Q  179 atcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    |||||||||  |||||||||||||||||||||  ||||||||||||  |||||||||    
T  6685706 atcataaatgtaaagtagaatatattgaattggaagtggtgaaagttgtattaatta 6685762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 244
Target Start/End: Complemental strand, 10818704 - 10818620
Alignment:
Q  161 tattggtgcattctct-ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    ||||||||||||||||  |||||||||| ||||||  ||| |||||||||  ||||| ||||||| ||||||||||  |||||||    
T  10818704 tattggtgcattctctagtatcataaatgcaaagtgaaatgtattgaattaggagtgatgaaagtgatattaattagagttataa 10818620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 246
Target Start/End: Original strand, 33602269 - 33602339
Alignment:
Q  179 atcataaattcaaagtagaatata---ttgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    ||||||||| |||||| |||||||   |||||||||||||| ||||||||| ||||||||  |||||||||    
T  33602269 atcataaatgcaaagtggaatataatattgaattgagagtgatgaaagtaacattaattagagttataatt 33602339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 222
Target Start/End: Complemental strand, 40710701 - 40710598
Alignment:
Q  119 agtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtgg 217  Q
    ||||||| |||||||||||| | || |||||   || |||| |||| ||||||||| | |||||||| || |||||||| |||||||||||||||||||     
T  40710701 agtgaaaaagagagaaaaatagttttgagtgtt-ttgtcaaatattcgtgcattcttccttatcatacatgcaaagtagcatatattgaattgagagtga 40710603  T
Q  218 tgaaa 222  Q
    |||||    
T  40710602 tgaaa 40710598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 284
Target Start/End: Original strand, 43077678 - 43077873
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataaa 186  Q
    ||||||||||| |||||||| ||  ||||| | |||| ||||||||||||| | ||  | ||  ||| | ||||||||||||||| ||   | |||||||    
T  43077678 tcatttcacacgtattaagacaaa-tgtataaatgaatgagagagaaaaatagttttaaatgtacttgttaactattggtgcattttccactgtcataaa 43077776  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    |  |||||  ||||||||||||||| | || ||||||||||||||||||  |||||||  |        |||||||||||||||||||||||||||||    
T  43077777 tgtaaagtgaaatatattgaattgaaaatgatgaaagtaatattaattagagttataaaaggaaaaaa-taattaatattgtattgaaaagtgaaatg 43077873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 43950398 - 43950449
Alignment:
Q  86 actcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaat 138  Q
    |||||||||||||||||||| ||||  ||||| ||||||||||||||||||||    
T  43950398 actcatttcacacttattaaaaaaaa-tgtataagtgaaagagagagaaaaat 43950449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 233
Target Start/End: Original strand, 883105 - 883247
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataaa 186  Q
    ||||||||||| | |||||||||| ||||| ||||||||||| |||||||||| ||| |||| ||  ||  | |||||||||||||  | ||||||||||    
T  883105 tcatttcacacattttaagaaaag-tgtataagtgaaagagaaagaaaaatggttta-agtgtcc--atgtagtattggtgcattcaccattatcataaa 883200  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaat 233  Q
    |   |||| ||| |||||||||| |||||| ||||| || |||||||    
T  883201 tgtgaagtggaagatattgaattcagagtgatgaaattattattaat 883247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 100 - 214
Target Start/End: Complemental strand, 2882129 - 2882014
Alignment:
Q  100 tattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaa 198  Q
    |||||||||||  ||||| | ||||||||| |||||||||  ||  ||||| ||| | || |||||||||||||| |  |||||||||| ||||||  ||    
T  2882129 tattaagaaaaaatgtataaatgaaagagatagaaaaatgattttaagtgctcttgttaagtattggtgcattctccactatcataaatgcaaagtgaaa 2882030  T
Q  199 tatattgaattgagag 214  Q
    ||||||| ||||||||    
T  2882029 tatattgtattgagag 2882014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 247
Target Start/End: Original strand, 33275738 - 33275809
Alignment:
Q  176 tttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    ||||| |||||| |||||||   |||||||||||| || || |||||||||||||||||||  |||||||||    
T  33275738 tttattataaatgcaaagtatggtatattgaattgggaatgatgaaagtaatattaattaaaattataattg 33275809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 246
Target Start/End: Original strand, 45464166 - 45464327
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataa 185  Q
    |||||||||||| |||||||||||  ||||| |||||| |||||| |||||||  ||  | ||| ||| | || | || |||||||  || ||||||| |    
T  45464166 ctcatttcacacatattaagaaaaa-tgtataagtgaatgagagaaaaaaatgattttaaatgctcttgttaagtgtttgtgcattaatcattatcatta 45464264  T
Q  186 attcaaagtagaa--tatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    || |||| |||||  |||||| ||||||||||| ||| ||||||||||||||  |||||||||    
T  45464265 atgcaaaatagaagatatattaaattgagagtgatgatagtaatattaattagagttataatt 45464327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 136
Target Start/End: Original strand, 5007194 - 5007240
Alignment:
Q  90 atttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaa 136  Q
    ||||||||| ||||||||||| |||||| ||| ||||||||||||||    
T  5007194 atttcacacatattaagaaaatgtgtataagtaaaagagagagaaaa 5007240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 247
Target Start/End: Original strand, 7420918 - 7420988
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    |||||||||||  |||||| |||||||| ||| ||||||   |||| ||||||||||||| ||||||||||    
T  7420918 ttatcataaatgaaaagtaaaatatatttaatagagagtaacgaaattaatattaattaaagttataattg 7420988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 289
Target Start/End: Complemental strand, 14136808 - 14136718
Alignment:
Q  198 atatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtca 289  Q
    ||||||| |||||||||| ||||| ||| | |||||||  ||||||||||       |||||||||||||||||||||||||| ||| ||||    
T  14136808 atatattaaattgagagtagtgaa-gtagtgttaattagagttataattggaaaaaagtaattaatattgtattgaaaagtgacatgagtca 14136718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 292
Target Start/End: Original strand, 28925798 - 28926004
Alignment:
Q  86 actcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcata 184  Q
    ||||||||||||| |||||||||||  ||||| | | || ||||||||||||| | ||  ||||| ||| | || ||||| |||||||||   |||||||    
T  28925798 actcatttcacacgtattaagaaaaa-tgtataaataaaggagagagaaaaatagttttaagtgcacttgttaagtattgatgcattctccactatcata 28925896  T
Q  185 aattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    | |  |||||  |||||||||||||| || || | |||  | |||||||||  |||||||  |       |||||||||||||||||||||| |||||||    
T  28925897 attgtaaagtgaaatatattgaattgggaatgatcaaaacagtattaattagagttataaagggaaaaaagtaattaatattgtattgaaaaatgaaatg 28925996  T
Q  285 ggtcaatt 292  Q
    | ||||||    
T  28925997 gctcaatt 28926004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 173
Target Start/End: Complemental strand, 32556325 - 32556243
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc 173  Q
    ||||||||||| ||||||||||| |||||| ||||||  |||||||||||||| ||  |||  |||| |||| |||||||||||||    
T  32556325 tcatttcacacatattaagaaaa-gtgtataagtgaa--agagagaaaaatggttttaagtatccttgtcaagtattggtgcattc 32556243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 3199881 - 3199844
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  3199881 gtaattaatattgtattgaaaagtgcaatgagtcaatt 3199844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 281
Target Start/End: Original strand, 5007609 - 5007687
Alignment:
Q  203 ttgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaa 281  Q
    |||||| | ||||| |||||||| |||||||||  ||||||||||       ||||||||||||| |||||||||||||    
T  5007609 ttgaatcgggagtgatgaaagtagtattaattagagttataattgaaaaaaggtaattaatattgcattgaaaagtgaa 5007687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 244
Target Start/End: Original strand, 13375213 - 13375298
Alignment:
Q  161 tattggtgcattctctt-tatcataaattcaaagt-agaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||||||||||   ||||||||||  ||||| | ||||||||||||||||| || ||||| ||||||||||||  |||||||    
T  13375213 tattggtgcattctccactatcataaatgtaaagtgaaaatatattgaattgagaatgatgaaaataatattaattagagttataa 13375298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 284
Target Start/End: Original strand, 13375593 - 13375622
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatg 284  Q
    ||||||||||||||||||||||||||||||    
T  13375593 gtaattaatattgtattgaaaagtgaaatg 13375622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 289
Target Start/End: Original strand, 17154376 - 17154409
Alignment:
Q  256 taattaatattgtattgaaaagtgaaatgggtca 289  Q
    |||||||||||||||||||||||||||| |||||    
T  17154376 taattaatattgtattgaaaagtgaaataggtca 17154409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 19009833 - 19009796
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    ||||||||||||||||||||||||||||| | ||||||    
T  19009833 gtaattaatattgtattgaaaagtgaaattgatcaatt 19009796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 284
Target Start/End: Original strand, 42881396 - 42881425
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatg 284  Q
    ||||||||||||||||||||||||||||||    
T  42881396 gtaattaatattgtattgaaaagtgaaatg 42881425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 284
Target Start/End: Original strand, 44534606 - 44534635
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatg 284  Q
    ||||||||||||||||||||||||||||||    
T  44534606 gtaattaatattgtattgaaaagtgaaatg 44534635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 285
Target Start/End: Original strand, 6723986 - 6724014
Alignment:
Q  257 aattaatattgtattgaaaagtgaaatgg 285  Q
    |||||||||||||||||||||||||||||    
T  6723986 aattaatattgtattgaaaagtgaaatgg 6724014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 344
Target Start/End: Original strand, 10394423 - 10394459
Alignment:
Q  308 gaaaatggctcagttattatgggactgagagagtata 344  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  10394423 gaaaatggctcagttattatgggacggagggagtata 10394459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 284
Target Start/End: Complemental strand, 44194639 - 44194611
Alignment:
Q  256 taattaatattgtattgaaaagtgaaatg 284  Q
    |||||||||||||||||||||||||||||    
T  44194639 taattaatattgtattgaaaagtgaaatg 44194611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 1e-63; HSPs: 76)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 87 - 332
Target Start/End: Complemental strand, 47238374 - 47238123
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataa 185  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||| || |||||||||||||||| |||||||||||| ||||||||||||    
T  47238374 ctcatttcacacttattaagaaaaagtgtataagtgaaagagagagaaaaatggttttgagtgcccttatcaacaattggtgcattcttctttatcataa 47238275  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgg 285  Q
    || ||||||| || || ||||  ||||||||||||||||| ||||||||| |||||||||||       |||||||||||||||||||||| |||||| |    
T  47238274 atgcaaagtacaaaatgttgagatgagagtggtgaaagtagtattaattagtgttataattg-gaaaaggtaattaatattgtattgaaaattgaaattg 47238176  T
Q  286 gtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggac 332  Q
    |||||||      ||||||||||||| || |||||||||| ||||||||||||    
T  47238175 gtcaatttttctgggacaatatttttttgcaaatggctcaattattatgggac 47238123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 83 - 247
Target Start/End: Original strand, 32971964 - 32972129
Alignment:
Q  83 ttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatc 181  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||||| | ||| ||    
T  32971964 ttgactcatttcacacttattaagaaaaaatgtataagtgaaagagagagaaaaatggttttgagtgcccttatcaactattggtgcattcttttttgtc 32972063  T
Q  182 ataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    |||||| |||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||    
T  32972064 ataaatgcaaagtagaatatattgaattgtgagtggtgaaagtattattaattagtgttataattg 32972129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 87 - 343
Target Start/End: Complemental strand, 32776140 - 32775876
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataa 185  Q
    |||||||||||| ||||||||||| |||||| |||||| ||||||||||||||| || ||||||| || | || ||||||||||||| ||||||||||||    
T  32776140 ctcatttcacacatattaagaaaaagtgtataagtgaaggagagagaaaaatggttttgagtgcctttgttaagtattggtgcattcttctttatcataa 32776041  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaata-ttgtattgaaaagtgaaatg 284  Q
    ||  ||||||||||||||||||||| |||||||||||||| ||||| |||  ||||||||||       |||||||||| |||||||| |||||||||||    
T  32776040 atgtaaagtagaatatattgaattgggagtggtgaaagtagtattatttagagttataattggaaaaaagtaattaatatttgtattggaaagtgaaatg 32775941  T
Q  285 ggtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagtat 343  Q
    ||||||||      ||||||||||||| || ||||| ||||||||||||||||| ||| ||||||    
T  32775940 ggtcaatttttttgggacaatatttttttgcaaatgcctcagttattatgggacggagggagtat 32775876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 87 - 292
Target Start/End: Complemental strand, 37264468 - 37264264
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcatt-ctctttatcataa 185  Q
    |||||||||||| ||||||||||| || ||| |||||||||||||  ||||||| || |||||||||| |||| ||||| |||||| |||||||||||||    
T  37264468 ctcatttcacacatattaagaaaaagtatataagtgaaagagaga--aaaatggttttgagtgcccttgtcaagtattgatgcattgctctttatcataa 37264371  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgg 285  Q
    || |||||||||||||||||||||| |||||||||||||| |||||||||  |||||||||        |||||||||||||||||||||||||||||||    
T  37264370 atgcaaagtagaatatattgaattgggagtggtgaaagtagtattaattagagttataattaggaaaaagtaattaatattgtattgaaaagtgaaatgg 37264271  T
Q  286 gtcaatt 292  Q
    |||||||    
T  37264270 gtcaatt 37264264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 103 - 292
Target Start/End: Original strand, 10355701 - 10355891
Alignment:
Q  103 taagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcatt-ctctttatcataaattcaaagtagaatat 201  Q
    |||||||| |||||| |||| |||||||| |||||||| || ||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  10355701 taagaaaaagtgtataagtgtaagagagaaaaaaatggttttgagtgtccttatcaactattggtgcatttctctttatcataaatgcaaagtagaatat 10355800  T
Q  202 attgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    |||||||||||| |||| ||||||||||||||||  ||||||||||       |||||||||||||||||| ||||| |||||||||||||    
T  10355801 attgaattgagaatggtaaaagtaatattaattagagttataattgaaaaaaagtaattaatattgtattggaaagtaaaatgggtcaatt 10355891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 83 - 292
Target Start/End: Original strand, 29996975 - 29997185
Alignment:
Q  83 ttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatc 181  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||| || || || |||| | || ||||||||||||| ||||||||    
T  29996975 ttgactcatttcacacttattaagaaaaagtgtataagtgaaagagaaagaaaaatggttttgaatgtccttgttaattattggtgcattcttctttatc 29997074  T
Q  182 ataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaa 281  Q
    |||||| ||||||| |||||||||| ||| || | ||||||||| ||||||||| | |||||||||       |||||||||||||||||||||| ||||    
T  29997075 ataaatgcaaagtataatatattgagttgggaattgtgaaagtagtattaattagtattataattgaaaaaaggtaattaatattgtattgaaaaatgaa 29997174  T
Q  282 atgggtcaatt 292  Q
    ||  |||||||    
T  29997175 atatgtcaatt 29997185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 121 - 269
Target Start/End: Complemental strand, 38589857 - 38589708
Alignment:
Q  121 tgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtg 219  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||| ||||||||    
T  38589857 tgaaagagagagaaaaatggttttgaatgcccttatcaactattggtgcattcttctttatcataaatgtaaagtagaatatattgaattgggagtggtg 38589758  T
Q  220 aaagtaatattaattaatgttataattgnnnnnnngtaattaatattgta 269  Q
    |||||| ||||||||| |||||||||||       |||||||||||||||    
T  38589757 aaagtagtattaattagtgttataattggaaaaaagtaattaatattgta 38589708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 2849409 - 2849208
Alignment:
Q  89 catttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaat 187  Q
    |||||||||| |||||||||||  ||||| | |||||||||||||||||| | || | ||| | || |||| |||||||||||||| |||||||||||||    
T  2849409 catttcacacatattaagaaaaa-tgtataaatgaaagagagagaaaaatagttttgcgtgtctttgtcaagtattggtgcattcttctttatcataaat 2849311  T
Q  188 tcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggt 287  Q
      |||||||||||||||||||||||||||||||||||| |||||||||   |||||||||       ||||||||| ||||||||||||||||||||| |    
T  2849310 gtaaagtagaatatattgaattgagagtggtgaaagtagtattaattagaattataattgaaaaaaagtaattaatgttgtattgaaaagtgaaatggat 2849211  T
Q  288 caa 290  Q
    |||    
T  2849210 caa 2849208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 79 - 292
Target Start/End: Complemental strand, 9603026 - 9602812
Alignment:
Q  79 acccttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctcttt 178  Q
    ||||| || |||||||||||||||||| |||| ||| || |||| |||||||| |||||| |||| || ||| ||| | |||||||| |||||||| |||    
T  9603026 accctggattcatttcacacttattaaaaaaaagtgcataagtggaagagagaaaaaaataggtttgaatgcgcttgttaactattgatgcattcttttt 9602927  T
Q  179 -atcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
     ||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||        ||||||||||||| ||||| |||    
T  9602926 tatcataaatgcaaagtagaacatattgaattgagagtggtgaaagtagtattaattagtgttataattagaaaaaagtaattaatattgcattgagaag 9602827  T
Q  278 tgaaatgggtcaatt 292  Q
    ||||||  |||||||    
T  9602826 tgaaataagtcaatt 9602812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 79 - 292
Target Start/End: Complemental strand, 9830597 - 9830383
Alignment:
Q  79 acccttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctcttt 178  Q
    ||||| || |||||||||||||||||| |||| ||| || |||| |||||||| |||||| |||| || ||| ||| | |||||||| |||||||| |||    
T  9830597 accctggattcatttcacacttattaaaaaaaagtgcataagtggaagagagaaaaaaataggtttgaatgcgcttgttaactattgatgcattcttttt 9830498  T
Q  179 -atcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
     ||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||        ||||||||||||| ||||| |||    
T  9830497 tatcataaatgcaaagtagaacatattgaattgagagtggtgaaagtagtattaattagtgttataattagaaaaaagtaattaatattgcattgagaag 9830398  T
Q  278 tgaaatgggtcaatt 292  Q
    ||||||  |||||||    
T  9830397 tgaaataagtcaatt 9830383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 161 - 345
Target Start/End: Original strand, 37496421 - 37496612
Alignment:
Q  161 tattggtgcattctct-ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaat 259  Q
    |||| ||||||||| | |||||||||||  ||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||       |||||    
T  37496421 tatttgtgcattctttcttatcataaatgtaaagtagaatatattgaattgagagtgatgaaagtagtattaattaaagttataattggaaaaaagtaat 37496520  T
Q  260 taatattgtattgaaaagtgaaatgggtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagtataa 345  Q
    |||| |||| |||||||||||||||||||||||      ||| ||||||||| || ||||| ||||||||||||||||| ||| ||||||||    
T  37496521 taatgttgtgttgaaaagtgaaatgggtcaatttttttgggataatatttttttgcaaatgactcagttattatgggacggagggagtataa 37496612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 91 - 342
Target Start/End: Complemental strand, 34064367 - 34064110
Alignment:
Q  91 tttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaattc 189  Q
    |||||||| |||||| |||| |||||| | ||||| |||||||||||| | || ||||| | || | || |||||||||||||| | |||||||||||      
T  34064367 tttcacacatattaaaaaaaagtgtataaatgaaatagagagaaaaatagttttgagtgtc-ttgttaagtattggtgcattctttcttatcataaatgt 34064269  T
Q  190 aaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtca 289  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||       |||| || | ||||||| |||||| ||||| ||||    
T  34064268 aaagtagaatatattgaattgagagtgatgaaagtaatattaattagagttataattgtaaaaaagtaactattgttgtattaaaaagtaaaatgagtca 34064169  T
Q  290 att------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagta 342  Q
    |||      ||||||||||||| || ||||| || |||||||||||||| ||| |||||    
T  34064168 attttttcgggacaatatttttttgcaaatgactaagttattatgggacggagggagta 34064110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 89 - 290
Target Start/End: Original strand, 30659433 - 30659634
Alignment:
Q  89 catttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaat 187  Q
    ||||||||||  ||||||||||| ||||  |  ||||||||||||||||| | || ||||||| || |||| |||| |||| |||| |||||||||||||    
T  30659433 catttcacacagattaagaaaag-tgtacaaaggaaagagagagaaaaatagttttgagtgcctttgtcaaatatttgtgcgttcttctttatcataaat 30659531  T
Q  188 tcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggt 287  Q
      ||||||||||||||||||||   ||||||||||||| |||||||||  ||||||||||       ||||||||| |||||||||||||||||||||||    
T  30659532 ataaagtagaatatattgaatttgaagtggtgaaagtagtattaattagagttataattggaaaaaagtaattaatgttgtattgaaaagtgaaatgggt 30659631  T
Q  288 caa 290  Q
    |||    
T  30659632 caa 30659634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 91 - 326
Target Start/End: Original strand, 3667832 - 3668073
Alignment:
Q  91 tttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaattc 189  Q
    |||||||| ||||||||||  |||||| ||||||| | ||||||||||   || ||||| | ||||||| |||| ||||||| | | |||||||||||      
T  3667832 tttcacacatattaagaaatagtgtataagtgaaaaaaagagaaaaataattttgagtgtc-ttatcaagtattagtgcattatttcttatcataaatgt 3667930  T
Q  190 aaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtca 289  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||   ||||| |||       ||||||| | |||||||||||||||||||||||||    
T  3667931 aaagtagaatatattgaattgagagtgatgaaagtaatattaattagaattatatttggaaaaaagtaattattgttgtattgaaaagtgaaatgggtca 3668030  T
Q  290 att------ggacaatatttttgtgaaaatggctcagttatta 326  Q
    |||      ||||||||||||| |  ||||| |||||||||||    
T  3668031 atttttttaggacaatatttttttacaaatgactcagttatta 3668073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 161 - 291
Target Start/End: Original strand, 5068325 - 5068453
Alignment:
Q  161 tattggtgcattctctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaatt 260  Q
    ||||||||||||||  |||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||       ||||||    
T  5068325 tattggtgcattct--ttatcataaatgtaaagtagaatatattgaattaagagtggtgaaagtaatattaattagagttataattggaaaaaagtaatt 5068422  T
Q  261 aatattgtattgaaaagtgaaatgggtcaat 291  Q
    | ||||||||| |||||||||||| ||||||    
T  5068423 agtattgtattaaaaagtgaaatgagtcaat 5068453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 114 - 275
Target Start/End: Complemental strand, 43008024 - 43007862
Alignment:
Q  114 gtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgag 212  Q
    |||| |||||||||||| ||||||| | || ||||| | || |||| |||| ||||||| | |||||||||||||| ||| |||||||||||||||||||    
T  43008024 gtataagtgaaagagagggaaaaatagttttgagtgtctttgtcaagtatttgtgcatttttctttatcataaatttaaattagaatatattgaattgag 43007925  T
Q  213 agtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaa 275  Q
    |||||||||| ||||||||||||  ||||| ||||       |||||||||||||||||||||    
T  43007924 agtggtgaaaataatattaattagagttattattggaaagaagtaattaatattgtattgaaa 43007862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 88 - 284
Target Start/End: Complemental strand, 8150114 - 8149918
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaa 186  Q
    ||||||||||| |||||||||||  ||||| |||||||||||||||||||||| ||  ||||   || |||| |||| ||||||| ||  ||||||||||    
T  8150114 tcatttcacacatattaagaaaaaatgtataagtgaaagagagagaaaaatggttttaagtgtt-ttgtcaaatatttgtgcattttccattatcataaa 8150016  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
     |||||||||||||||| ||| |   |||| ||||||||||||||||||  ||||||||||       |||||||||||||||||||||| |||||||    
T  8150015 atcaaagtagaatatatcgaactagtagtgatgaaagtaatattaattagagttataattggaaaaaagtaattaatattgtattgaaaaatgaaatg 8149918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 89 - 231
Target Start/End: Original strand, 45218111 - 45218253
Alignment:
Q  89 catttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaat 187  Q
    ||||||||||  ||||||||||| ||||| |  ||||||||||||||||| | || ||||||| || |||| |||||||||||||| |||||||||||||    
T  45218111 catttcacacaaattaagaaaag-tgtataaaggaaagagagagaaaaatagttttgagtgcctttttcaagtattggtgcattcttctttatcataaat 45218209  T
Q  188 tcaaagtagaatatattgaattgagagtggtgaaagtaatatta 231  Q
      ||||||||||||||||||||| |||| ||||||||| |||||    
T  45218210 gtaaagtagaatatattgaattgggagttgtgaaagtagtatta 45218253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 287
Target Start/End: Original strand, 27337892 - 27338023
Alignment:
Q  156 tcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnn 254  Q
    |||| |||||||||||| | |||||||||||||  |||||| |||||||||||||| ||||||| ||||||||||||||||| ||||||||||           
T  27337892 tcaagtattggtgcattattctttatcataaatgtaaagtataatatattgaattgggagtggtaaaagtaatattaattaaagttataattggaaaaaa 27337991  T
Q  255 gtaattaatattgtattgaaaagtgaaatgggt 287  Q
     |||||||| |||||||||||||||||||||||    
T  27337992 -taattaatgttgtattgaaaagtgaaatgggt 27338023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 156 - 283
Target Start/End: Original strand, 14648938 - 14649068
Alignment:
Q  156 tcaactattggtgcatt-ctctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnn 254  Q
    |||| |||||||||||| ||| ||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||  ||||||||||           
T  14648938 tcaattattggtgcatttctcattatcataaatgcaaggtagaatatattgaattgagagtgatgaaagtaatattaattagagttataattggaaaaaa 14649037  T
Q  255 gtaatta--atattgtattgaaaagtgaaat 283  Q
    |||||||  ||||||||||||||||| ||||    
T  14649038 gtaattaatatattgtattgaaaagtaaaat 14649068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 127 - 290
Target Start/End: Complemental strand, 24288540 - 24288374
Alignment:
Q  127 agagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagta 225  Q
    ||||||| |||| | || ||||||| || |||| |||| ||||||||| |||||||||||||  |||||||||||||||||||||| ||  ||||| |||    
T  24288540 agagagataaatagttttgagtgcctttttcaagtatttgtgcattcttctttatcataaatgtaaagtagaatatattgaattgaaagctgtgaatgta 24288441  T
Q  226 atattaattaatgttataattgnnnnnnngtaattaata--ttgtattgaaaagtgaaatgggtcaa 290  Q
    ||||||||||  ||||||||||       ||||||||||  ||| ||||||||||||||||||||||    
T  24288440 atattaattagagttataattggagtaaagtaattaatatgttgcattgaaaagtgaaatgggtcaa 24288374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 174 - 285
Target Start/End: Original strand, 39343709 - 39343820
Alignment:
Q  174 tctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattga 273  Q
    ||||||||||||||  ||||||||||||||||||||  ||||||||||| || |||||||||  ||||||||||       |||||||||||||||||||    
T  39343709 tctttatcataaatgtaaagtagaatatattgaatttggagtggtgaaaatagtattaattagagttataattgaaaaagggtaattaatattgtattga 39343808  T
Q  274 aaagtgaaatgg 285  Q
    ||||||||||||    
T  39343809 aaagtgaaatgg 39343820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 206
Target Start/End: Original strand, 23111038 - 23111159
Alignment:
Q  86 actcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcata 184  Q
    |||||||||| ||||||||||||||  ||||| | ||||| |||||||||||||  || || || | ||||||||||||||||||||| |||||||||||    
T  23111038 actcatttcatacttattaagaaaaaatgtataaatgaaatagagagaaaaatgattttgaatgtctttatcaactattggtgcattcttctttatcata 23111137  T
Q  185 aattcaaagtagaatatattga 206  Q
    |||  |||||||||||||||||    
T  23111138 aatgtaaagtagaatatattga 23111159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 87 - 285
Target Start/End: Complemental strand, 11616717 - 11616519
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataa 185  Q
    |||||||||||| |||||| ||||  ||||| | |||| ||||||||||||||| ||  ||||| ||| | || |||||||||||||||   |||||||     
T  11616717 ctcatttcacacatattaaaaaaa--tgtataaatgaaggagagagaaaaatggttttaagtgctcttgttaagtattggtgcattctccactatcatat 11616620  T
Q  186 attcaaagtagaatata-ttgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    || |||||| ||||||| |||||||| |||||||||||||  |||||||||  |||||||  |       ||||||||||||||||||||||||||||||    
T  11616619 atgcaaagtggaatataattgaattgggagtggtgaaagttgtattaattagagttataaagggaaaaaagtaattaatattgtattgaaaagtgaaatg 11616520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 177 - 292
Target Start/End: Original strand, 6591582 - 6591697
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaa 276  Q
    ||||||||||| ||||||||||||||||||||| |||||  |||| |||||||||||||  ||||||||||       || |||||||||||||| ||||    
T  6591582 ttatcataaatgcaaagtagaatatattgaattaagagtaatgaacgtaatattaattatagttataattgaaaaagagttattaatattgtatttaaaa 6591681  T
Q  277 gtgaaatgggtcaatt 292  Q
    |||||||| |||||||    
T  6591682 gtgaaatgagtcaatt 6591697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 81 - 247
Target Start/End: Complemental strand, 21446599 - 21446432
Alignment:
Q  81 ccttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tcttta 179  Q
    ||||| ||||||| | ||||||||||||||  ||||| ||||||||||||||||||||   || ||||| |||||| || |||| |||||||| | ||||    
T  21446599 ccttggctcattttatacttattaagaaaaattgtataagtgaaagagagagaaaaataattttgagtgtccttattaattattagtgcattctttttta 21446500  T
Q  180 tcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    ||||||||  |||||| |||||||| || ||| | || | |||||||||| ||||| | |||||||||    
T  21446499 tcataaatataaagtataatatattaaactgaaaatgataaaagtaatatcaattagtattataattg 21446432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 121 - 284
Target Start/End: Complemental strand, 28333293 - 28333130
Alignment:
Q  121 tgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaattcaaagtagaatatattgaattgagagtggtg 219  Q
    |||||||||||||||||| | || ||||| | || | || ||||| |||||| | | |||||||||||  ||||||||||||||||||||| ||||| ||    
T  28333293 tgaaagagagagaaaaatagttttgagtgac-ttgttaagtattgatgcattatttcttatcataaatgtaaagtagaatatattgaattgggagtgatg 28333195  T
Q  220 aaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    ||||||||||||||||  |||||| |||       ||||||| | ||||||||||||||||||||    
T  28333194 aaagtaatattaattagagttatatttggaaaaaagtaattattgttgtattgaaaagtgaaatg 28333130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 121 - 235
Target Start/End: Complemental strand, 36070228 - 36070113
Alignment:
Q  121 tgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtg 219  Q
    |||||||||||| ||||||| || ||||| | || |||| |||||||||||| | ||||||||||||   ||||||||||||| ||||||||||||| ||    
T  36070228 tgaaagagagaggaaaatggttttgagtgtctttgtcaaatattggtgcattattctttatcataaacgtaaagtagaatatactgaattgagagtgatg 36070129  T
Q  220 aaagtaatattaatta 235  Q
    |||||| |||||||||    
T  36070128 aaagtagtattaatta 36070113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 88 - 292
Target Start/End: Complemental strand, 9658993 - 9658789
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaa 186  Q
    ||||||||||| |||||||||||  ||||  || ||||||||||||||||||| || |||||  ||| | ||||||||||||||| | | |||| |||||    
T  9658993 tcatttcacacatattaagaaaaaatgtacaagcgaaagagagagaaaaatggttttgagtg-tcttgtgaactattggtgcattttcccttatgataaa 9658895  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatggg 286  Q
    |  ||||||||| |||| |||||  ||||| ||||| || || |||||||  ||||||||        |||||||||| ||||||||||||||||||  |    
T  9658894 tgtaaagtagaacatatcgaattaggagtgatgaaaatagtactaattaaaattataattagtaaaaagtaattaataatgtattgaaaagtgaaataag 9658795  T
Q  287 tcaatt 292  Q
    ||||||    
T  9658794 tcaatt 9658789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 289
Target Start/End: Complemental strand, 39498740 - 39498628
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaa 276  Q
    |||||||||||||||| || |||||||||||||| ||||| ||||||||||||||||||   ||||||||        ||||||||||||| ||||||||    
T  39498740 ttatcataaattcaaaatataatatattgaattgggagtgatgaaagtaatattaattagaattataattagaaaaaagtaattaatattgcattgaaaa 39498641  T
Q  277 gtgaaatgggtca 289  Q
    | ||||| |||||    
T  39498640 gagaaataggtca 39498628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 292
Target Start/End: Complemental strand, 17266144 - 17265978
Alignment:
Q  127 agagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagta 225  Q
    |||||||||||||| ||| ||||   |||| || |||||||||||||| |  |||||||||| ||||||  ||||||| |||||| ||||| ||||| ||    
T  17266144 agagagaaaaatggtttaaagtgtttttattaagtattggtgcattcttcactatcataaatgcaaagtgaaatatatcgaattgggagtgatgaaaata 17266045  T
Q  226 atattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    ||||||||||  | |||| |||       ||||||||| || |||||||||||||||| ||||||||    
T  17266044 atattaattagagatatatttggaaaaaagtaattaatgttatattgaaaagtgaaattggtcaatt 17265978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 247
Target Start/End: Complemental strand, 27621995 - 27621837
Alignment:
Q  86 actcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcatt-ctctttatcata 184  Q
    |||||||||||||||||||||||||  ||||| |   ||||||| |||||||||  || |||| |||||||||| |||||||||||| ||| |||||||     
T  27621995 actcatttcacacttattaagaaaaaatgtataatgaaaagagaaagaaaaatgattttgagtacccttatcaattattggtgcattcctccttatcat- 27621897  T
Q  185 aattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    ||| | ||||| |||   || ||||| |||| ||||||||| |||||||||  ||||||||||    
T  27621896 aatgcgaagtataat---ttaaattgggagttgtgaaagtagtattaattagagttataattg 27621837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 283
Target Start/End: Complemental strand, 29257612 - 29257507
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    |||||||||| |||||| ||||||||||||||| ||||| ||||||||||||||||||  |||||||  |       |||||||||  ||||||||||||    
T  29257612 tatcataaatgcaaagtggaatatattgaattgggagtgatgaaagtaatattaattagagttataaagggaaaaaagtaattaatgatgtattgaaaag 29257513  T
Q  278 tgaaat 283  Q
    ||||||    
T  29257512 tgaaat 29257507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 284
Target Start/End: Original strand, 34963758 - 34963959
Alignment:
Q  86 actcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctcttt----atc 181  Q
    |||||||||| || |||||||||||  ||||| | ||| |||| ||||||||| | ||  ||||  ||| | || ||||||||||||||||||    |||    
T  34963758 actcatttcatacgtattaagaaaaa-tgtataaatgatagagggagaaaaatagttttaagtgaacttgttaaatattggtgcattctctttcactatc 34963856  T
Q  182 ataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaa 281  Q
    ||||||  |||||  |||||||| |||||||| || ||||||||||||||||||  |||||||  |       |||||||||| ||||||||||||||||    
T  34963857 ataaatgtaaagtgaaatatatttaattgagaatgatgaaagtaatattaattagagttataaagggaaaaaagtaattaatactgtattgaaaagtgaa 34963956  T
Q  282 atg 284  Q
    |||    
T  34963957 atg 34963959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 283
Target Start/End: Original strand, 23111593 - 23111677
Alignment:
Q  199 tatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaat 283  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||||       |||||||||||| ||||||||||| ||||    
T  23111593 tatattgaattgagactggtgaaagtagtattaattagtgttataattggaaaaaagtaattaatattatattgaaaagtaaaat 23111677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 148 - 246
Target Start/End: Complemental strand, 25778840 - 25778741
Alignment:
Q  148 tgcccttatcaactattggtgcattctct-ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    |||||||||||| ||||||| |||||  | ||||||||||| ||||||| ||||||||||||||  |||| |||||||| |||||||||  |||||||||    
T  25778840 tgcccttatcaagtattggtacattccttcttatcataaatgcaaagtaaaatatattgaattggaagtgatgaaagtagtattaattagagttataatt 25778741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 161 - 284
Target Start/End: Original strand, 31581467 - 31581591
Alignment:
Q  161 tattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaat 259  Q
    |||||||||||||||   ||||||||||  ||| | |||||||||||||||| | || |||||||| |||||||||  ||||||| ||       |||||    
T  31581467 tattggtgcattctccaatatcataaatgtaaaatggaatatattgaattgaaaatgatgaaagtagtattaattagagttataaatggaaaaaagtaat 31581566  T
Q  260 taatattgtattgaaaagtgaaatg 284  Q
    |||||||||||||||||||||||||    
T  31581567 taatattgtattgaaaagtgaaatg 31581591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 292
Target Start/End: Original strand, 40023681 - 40023882
Alignment:
Q  90 atttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcatt-ctctttatcataaatt 188  Q
    ||||||||  |||||||||||  | ||| | ||||| |||||||||||| | || ||||| | || |||| |||| | ||||| ||| ||| |||||||     
T  40023681 atttcacatgtattaagaaaaaatatataattgaaaaagagagaaaaattgttttgagtgtc-ttgtcaaatattagagcatttctccttaccataaatg 40023779  T
Q  189 caaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtc 288  Q
    ||||||| |||||||||||||  || || ||||| || |||||||||  |||||||||        |||||||||||||||||||||||||||||| |||    
T  40023780 caaagtaaaatatattgaattatgaatgatgaaattactattaattagagttataatt-aaaaaaagtaattaatattgtattgaaaagtgaaatgagtc 40023878  T
Q  289 aatt 292  Q
    ||||    
T  40023879 aatt 40023882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 162 - 222
Target Start/End: Complemental strand, 6838144 - 6838083
Alignment:
Q  162 attggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaa 222  Q
    ||||||||||||| |||||||||||||  |||||| ||||||||||||||||||||||||||    
T  6838144 attggtgcattcttctttatcataaatataaagtaaaatatattgaattgagagtggtgaaa 6838083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 87 - 284
Target Start/End: Complemental strand, 30463172 - 30462975
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctcttta-tcataa 185  Q
    |||||||||| | |||||||||||  ||||| | |||| ||||||||||||| | ||  ||||| ||| | || |||||||||||||||   | ||||||    
T  30463172 ctcatttcacgcgtattaagaaaaa-tgtataaatgaatgagagagaaaaatagttttaagtgcacttgttaagtattggtgcattctccacaatcataa 30463074  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    ||  ||| | |||||||||||||||| | || ||||||||||||||||||  |||||||  |       || ||||||||||||| |||||||||||||    
T  30463073 atgtaaaatggaatatattgaattgaaaatgatgaaagtaatattaattagagttataaaaggaaaaaagtcattaatattgtatggaaaagtgaaatg 30462975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 284
Target Start/End: Original strand, 33773995 - 33774189
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataaa 186  Q
    ||||||||||  ||||||||||| |||||| |||||||||||||||||||| | || ||||| | || | || ||||| || ||||||   ||||||| |    
T  33773995 tcatttcacatatattaagaaaaagtgtataagtgaaagagagagaaaaatagttttgagtgtc-ttgttaagtattgatgtattctccactatcataga 33774093  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    | |||||| ||||||| |||||||  ||| ||||||||| |||||||||   ||||||  |        |||||||||||||||||||||||||||||    
T  33774094 tgcaaagtggaatatactgaattgtaagttgtgaaagtagtattaattagaattataaaggaaaaaa--taattaatattgtattgaaaagtgaaatg 33774189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 235
Target Start/End: Original strand, 37490570 - 37490717
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataaa 186  Q
    ||||||||||| | |||||||||  ||||| | |||| ||||||||||||||  ||  ||||   || | || |||||||||||||||   |||||||||    
T  37490570 tcatttcacacatgttaagaaaaa-tgtataaatgaaggagagagaaaaatgattttaagtgttttttttaagtattggtgcattctccactatcataaa 37490668  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    | |||||| |||||||||||||||| |||| | ||||||||||||||||    
T  37490669 tgcaaagtggaatatattgaattgatagtgataaaagtaatattaatta 37490717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 285
Target Start/End: Original strand, 7425829 - 7426028
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatc-aactattggtgcattctctt-tatcataa 185  Q
    ||||||||||| |||||||| ||  ||||| | |||| ||||||||||||||| ||  ||||  ||| |  || |||||||||||||||   ||||||||    
T  7425829 tcatttcacacgtattaagacaaa-tgtataaatgaatgagagagaaaaatggttttaagtgttcttgtttaagtattggtgcattctccactatcataa 7425927  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttata-attgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    || |||||| |||||||||||||||  ||| ||||||||| |||||| ||  |||||| |  |       ||||||||||||||||||||||||||||||    
T  7425928 atgcaaagtggaatatattgaattggaagttgtgaaagtagtattaactagagttatataagggaaaaaagtaattaatattgtattgaaaagtgaaatg 7426027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 290
Target Start/End: Complemental strand, 18731530 - 18731395
Alignment:
Q  153 ttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnn 251  Q
    ||||||| ||||| || ||||| |||||||||||||  |||||||||||||||||||||  |||||||||||   |||||||||  ||||||||||        
T  18731530 ttatcaagtattgatgaattcttctttatcataaatgtaaagtagaatatattgaattggaagtggtgaaag---tattaattagagttataattggaaa 18731434  T
Q  252 nnngtaattaatattgtattgaaaagtgaaatgggtcaa 290  Q
       | ||||||| |||||||| ||| |||||||| ||||    
T  18731433 aaagcaattaatgttgtattggaaactgaaatggatcaa 18731395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 342
Target Start/End: Original strand, 2846718 - 2846888
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    ||||||||||||||||| |||||||||||||||  | || |||||||| |||||||||  |||||||  |       |||||||||  ||||||||||||    
T  2846718 tatcataaattcaaagtggaatatattgaattggaattgatgaaagtagtattaattagagttataaaaggaaaaaagtaattaatgatgtattgaaaag 2846817  T
Q  278 tgaaatgggtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagta 342  Q
    |||||||  ||| ||      ||||| | ||||  |||||||| ||||||||||||||||| ||| |||||    
T  2846818 tgaaatgactcacttattttgggacacttttttattgaaaatgactcagttattatgggacggagggagta 2846888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 25940778 - 25940848
Alignment:
Q  166 gtgcattctct-ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    ||||||||||| ||||||||||| |||| ||||||||||| |||| |||||| |||||||| |||||||||    
T  25940778 gtgcattctctattatcataaatgcaaactagaatatattaaatttagagtgatgaaagtagtattaatta 25940848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 283
Target Start/End: Complemental strand, 30462727 - 30462620
Alignment:
Q  176 tttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaa 275  Q
    ||||||||||||  ||| || |||||||||||||||||||| ||||| || |||||||||  ||||||||||        |||||||| |||||||||||    
T  30462727 tttatcataaatgtaaaatataatatattgaattgagagtgatgaaattagtattaattagagttataattgaaaaaaaataattaatgttgtattgaaa 30462628  T
Q  276 agtgaaat 283  Q
    | ||||||    
T  30462627 attgaaat 30462620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 34001900 - 34001958
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    ||||||||||| |||||| ||||||||||||||||| ||| |||||||| |||||||||    
T  34001900 ttatcataaatgcaaagtggaatatattgaattgagggtgatgaaagtagtattaatta 34001958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 234
Target Start/End: Original strand, 46095416 - 46095518
Alignment:
Q  133 aaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatatta 231  Q
    |||||||| || |||||| ||| | || |||| |||||||||||  |||||||||| ||||||  |||||||||||||||||||| | |||||| |||||    
T  46095416 aaaaatggttttgagtgctcttgttaaatatttgtgcattctctactatcataaatgcaaagtgaaatatattgaattgagagtgataaaagtagtatta 46095515  T
Q  232 att 234  Q
    |||    
T  46095516 att 46095518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 284
Target Start/End: Original strand, 40590867 - 40590973
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    |||||||||| ||||||||||||||||||| ||||| |  | |||||| |||||||||  |||||||  |       ||||||||||||||||| |||||    
T  40590867 tatcataaatacaaagtagaatatattgaaatgagaataataaaagtagtattaattagagttataaaaggaaaaaagtaattaatattgtatttaaaag 40590966  T
Q  278 tgaaatg 284  Q
    |||||||    
T  40590967 tgaaatg 40590973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 88 - 246
Target Start/End: Original strand, 1101894 - 1102053
Alignment:
Q  88 tcatttcacacttattaagaaaa-ggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataa 185  Q
    ||||||||||  ||||||||||| ||||||| ||||||||||| | ||||  |  || || || | || |||| |||||||| ||| ||| ||||  |||    
T  1101894 tcatttcacatatattaagaaaaaggtgtattagtgaaagagaaaaaaaaccgattttgattgtc-ttgtcaagtattggtgtattttctattattttaa 1101992  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    || ||||||||||||||| |||||||||||  ||||| |||||||||||||  ||||||||    
T  1101993 atacaaagtagaatatatcgaattgagagtaatgaaaataatattaattaaaattataatt 1102053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 121 - 244
Target Start/End: Complemental strand, 33584686 - 33584562
Alignment:
Q  121 tgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtg 219  Q
    |||| ||||||||||||||| ||  |||||  || | || |||||||| ||||||   |||||||||| |||| | ||||||||||||||| ||||| ||    
T  33584686 tgaaggagagagaaaaatggttttaagtgctattgttaagtattggtgtattctccagtatcataaatgcaaaatggaatatattgaattgggagtgatg 33584587  T
Q  220 aaagtaatattaattaatgttataa 244  Q
    |||||| |||||||||  |||||||    
T  33584586 aaagtagtattaattatagttataa 33584562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 121 - 244
Target Start/End: Original strand, 38181858 - 38181982
Alignment:
Q  121 tgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtg 219  Q
    |||||||||||||||||||| ||  ||||  |||   || |||||||||||| ||   |||||||||| |||| |||||||||||||||||  ||| |||    
T  38181858 tgaaagagagagaaaaatggttttaagtgttcttggtaagtattggtgcattttccactatcataaatgcaaaatagaatatattgaattggaagttgtg 38181957  T
Q  220 aaagtaatattaattaatgttataa 244  Q
    |||||| |||||||||  |||||||    
T  38181958 aaagtagtattaattagagttataa 38181982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 235
Target Start/End: Original strand, 1643326 - 1643437
Alignment:
Q  125 agagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataaattcaaagtagaatatattgaattgagagtggtgaaag 223  Q
    ||||||||||||||   ||| |||||  |||| || ||||||||||||| || | ||||||||| |||||| ||||||||| |||||| ||| | |||||    
T  1643326 agagagagaaaaataatttaaagtgcttttattaagtattggtgcattcttcataatcataaatgcaaagtggaatatattaaattgaaagttgggaaag 1643425  T
Q  224 taatattaatta 235  Q
    || |||||||||    
T  1643426 tagtattaatta 1643437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 21412076 - 21412134
Alignment:
Q  176 tttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    ||||||||||||  |||||| ||||||||||||||||| ||||||||||| |||||||||    
T  21412076 tttatcataaatgtaaagtaaaatatattgaattgaga-tggtgaaagtagtattaatta 21412134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 284
Target Start/End: Complemental strand, 36117724 - 36117621
Alignment:
Q  180 tcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtg 279  Q
    ||||||||  ||||| |||||||||||||||| | || ||||||| ||||||||||| |||||||  |        ||||||||||||||||||||||||    
T  36117724 tcataaatgtaaagtggaatatattgaattgaaaatgatgaaagtgatattaattaaagttataa-agggaaaaaataattaatattgtattgaaaagtg 36117626  T
Q  280 aaatg 284  Q
    |||||    
T  36117625 aaatg 36117621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 6697236 - 6697186
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaat 138  Q
    |||||||||||||||||||||||  ||||| ||||||||| ||||||||||    
T  6697236 tcatttcacacttattaagaaaaaatgtataagtgaaagaaagagaaaaat 6697186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 283
Target Start/End: Complemental strand, 30459153 - 30459022
Alignment:
Q  153 ttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnn 251  Q
    ||||||| ||||| |||||| | |||||| ||||||  ||| |||||||||||||||||||| || ||||| |  |||||||||   |||||||||        
T  30459153 ttatcaaatattgatgcattattctttataataaatgtaaaatagaatatattgaattgagaatgctgaaaatgttattaattagaattataattgaaaa 30459054  T
Q  252 nnngtaattaatattgtattgaaaagtgaaat 283  Q
       ||||||||||||||||| |||||| ||||    
T  30459053 aatgtaattaatattgtattaaaaagtaaaat 30459022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 285
Target Start/End: Original strand, 46288473 - 46288580
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    |||||| ||| |||||| |||||||||||||||| |||  |||||||| |||||||||  |||||||  |        ||||||||||| ||||||||||    
T  46288473 tatcattaatgcaaagtggaatatattgaattgaaagttatgaaagtagtattaattagagttataaagggaaaaaattaattaatattatattgaaaag 46288572  T
Q  278 tgaaatgg 285  Q
    ||||||||    
T  46288573 tgaaatgg 46288580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 1099132 - 1099197
Alignment:
Q  182 ataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    |||||| ||||||||||||||| ||||||||  |  ||||| ||||||||||||| ||||||||||    
T  1099132 ataaatacaaagtagaatatatcgaattgaggataatgaaaataatattaattaaagttataattg 1099197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 2842094 - 2842151
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    |||||||||| ||||||  ||||||||||||| |||||| |||||||| |||||||||    
T  2842094 tatcataaatgcaaagtgaaatatattgaatttagagtgatgaaagtagtattaatta 2842151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 244
Target Start/End: Original strand, 23186167 - 23186251
Alignment:
Q  161 tattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||||||||||   |||||||||| |||||||||||||||||||||  ||||| | |||||| | |||||||  |||||||    
T  23186167 tattggtgcattctccactatcataaatacaaagtagaatatattgaatttggagtgataaaagtagtgttaattagagttataa 23186251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 29434624 - 29434688
Alignment:
Q  180 tcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||| |||||| ||||||||||||||| || || |||||||| |||||||||  |||||||    
T  29434624 tcataaatgcaaagtggaatatattgaattgtgaatgatgaaagtagtattaattagagttataa 29434688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 244
Target Start/End: Original strand, 44604530 - 44604585
Alignment:
Q  189 caaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||| ||||||||||| ||||||||| |||||||| |||||||||  |||||||    
T  44604530 caaagtggaatatattgagttgagagtgatgaaagtagtattaattagagttataa 44604585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 281
Target Start/End: Original strand, 3781240 - 3781323
Alignment:
Q  198 atatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaa 281  Q
    ||||||||||||| ||||  ||||| || |||||||||  ||||||||||       ||||||||||||| |||||||||||||    
T  3781240 atatattgaattgggagtaatgaaaatattattaattagagttataattgaaacaaagtaattaatattgcattgaaaagtgaa 3781323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 11726847 - 11726789
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    |||||||||||  ||||||||| ||||||||||||||||| |  || ||||||||||||    
T  11726847 ttatcataaatataaagtagaagatattgaattgagagtgatacaaataatattaatta 11726789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 292
Target Start/End: Complemental strand, 41059428 - 41059349
Alignment:
Q  213 agtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    ||||||||||||| ||||||||||  |||||||||       |||||||||||| ||||||||| |||||| | ||||||    
T  41059428 agtggtgaaagtagtattaattaaatttataattgaaaaaaagtaattaatattatattgaaaaatgaaatagatcaatt 41059349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 231
Target Start/End: Original strand, 44682335 - 44682389
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatatta 231  Q
    ||||||||||| ||||  | |||||||| ||||||||||| ||||||||||||||    
T  44682335 ttatcataaatacaaatcataatatattaaattgagagtgatgaaagtaatatta 44682389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 292
Target Start/End: Complemental strand, 47453989 - 47453955
Alignment:
Q  258 attaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    |||||||||||||||||||||||||||| ||||||    
T  47453989 attaatattgtattgaaaagtgaaatggctcaatt 47453955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 27242775 - 27242840
Alignment:
Q  181 cataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    ||||||| |||| || ||||||||||||||||| || ||||| ||| ||||||||  |||||||||    
T  27242775 cataaatgcaaaataaaatatattgaattgagaatgatgaaaataaaattaattagagttataatt 27242840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Complemental strand, 32345588 - 32345551
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  32345588 gtaattaatattgtattgaaaagtcaaatgagtcaatt 32345551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 32972389 - 32972426
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  32972389 gtaattaatattgtattggaaagtgaaatgagtcaatt 32972426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 284
Target Start/End: Complemental strand, 48981367 - 48981338
Alignment:
Q  255 gtaattaatattgtattgaaaagtgaaatg 284  Q
    ||||||||||||||||||||||||||||||    
T  48981367 gtaattaatattgtattgaaaagtgaaatg 48981338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 284
Target Start/End: Original strand, 21412159 - 21412187
Alignment:
Q  256 taattaatattgtattgaaaagtgaaatg 284  Q
    |||||||||||||||||||||||||||||    
T  21412159 taattaatattgtattgaaaagtgaaatg 21412187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 28923248 - 28923328
Alignment:
Q  156 tcaactattggtgcattctct-ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    |||| ||||||||||||| |  |||| |||||| |||||| ||| ||| | ||||||||||| ||||||| ||||||||||    
T  28923248 tcaagtattggtgcattcaccattattataaatgcaaagtggaagataataaattgagagtgatgaaagtgatattaatta 28923328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 284
Target Start/End: Original strand, 46095568 - 46095596
Alignment:
Q  256 taattaatattgtattgaaaagtgaaatg 284  Q
    |||||||||||||||||||||||||||||    
T  46095568 taattaatattgtattgaaaagtgaaatg 46095596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 113; Significance: 4e-57; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 88 - 345
Target Start/End: Original strand, 15371815 - 15372078
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaa 186  Q
    |||||||||| |||||||||||| |||||| |||||||| ||||||||||||| || ||||| | |||||||||||| ||||||||| ||||||||||||    
T  15371815 tcatttcacaattattaagaaaaagtgtataagtgaaagcgagagaaaaatggttttgagtgtc-ttatcaactattagtgcattcttctttatcataaa 15371913  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatggg 286  Q
    | |||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||       ||||| |||||  |||||||||||||||| ||    
T  15371914 tgcaaagtagaatatattgaattgggagtggtgaaagtagtattaattagtgttataattggaaaaaagtaataaatataatattgaaaagtgaaatagg 15372013  T
Q  287 tcaa------ttggacaatatttttgtgaaaatggctcagttattatgggactgagagagtataa 345  Q
    ||||      | | ||||||||||| |  ||||||||||||||||||||||| ||| ||||||||    
T  15372014 tcaatatttctagaacaatatttttttacaaatggctcagttattatgggacagagggagtataa 15372078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 82 - 291
Target Start/End: Complemental strand, 15325308 - 15325099
Alignment:
Q  82 cttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttat 180  Q
    |||||||||||||||| |||||||||||| |||||| |||||||||||||||||| ||| || || |||| ||||||||||||||||  |||| ||||||    
T  15325308 cttgactcatttcacaattattaagaaaaagtgtataagtgaaagagagagaaaattggttttgaatgcc-ttatcaactattggtgtgttcttctttat 15325210  T
Q  181 cataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtga 280  Q
    | ||||| ||||||||||||||||| |||||||||||||||| || ||||||||| | |||||||||       |||||||||||  |||||||||||||    
T  15325209 cgtaaatgcaaagtagaatatattggattgagagtggtgaaactagtattaattagtattataattggaaaaaagtaattaatataatattgaaaagtga 15325110  T
Q  281 aatgggtcaat 291  Q
    ||||| |||||    
T  15325109 aatggatcaat 15325099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 87 - 342
Target Start/End: Original strand, 34803655 - 34803919
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcatt-ctctt--tatcat 183  Q
    |||||||||||||||||||||||| |||||| |  ||||||||||| ||||||| || ||||| | ||||||||||||| |||||| |||||  ||||||    
T  34803655 ctcatttcacacttattaagaaaaagtgtataaaggaaagagagaggaaaatggttttgagtgtctttatcaactattgatgcattcctctttatatcat 34803754  T
Q  184 aaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaat 283  Q
    |||| |||| || ||||||||||||||||||| ||||||||| |||||||||  ||||||||||       |||||| ||||||||||||||||||||||    
T  34803755 aaatgcaaaataaaatatattgaattgagagttgtgaaagtagtattaattatagttataattgaaaaaaagtaattgatattgtattgaaaagtgaaat 34803854  T
Q  284 gggtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagta 342  Q
     ||||||||      | ||||||||||| |  || |||||||||||||||||||| ||| |||||    
T  34803855 tggtcaatttttttggaacaatatttttttacaattggctcagttattatgggaccgagggagta 34803919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 81 - 345
Target Start/End: Original strand, 15351328 - 15351598
Alignment:
Q  81 ccttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-cttta 179  Q
    ||||||||||||||||| ||||||||||||  ||||| |||||| ||||||||||| ||  ||  |||||| ||||||||||||| ||| |||| |||||    
T  15351328 ccttgactcatttcacaattattaagaaaaaatgtataagtgaatgagagagaaaattgatttttagtgcc-ttatcaactattgatgcgttcttcttta 15351426  T
Q  180 tcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtg 279  Q
    |||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||| |||| ||||||       |||||||||||  ||||||||||||    
T  15351427 tcataaatgcaaggtagaatatattgaattgagagcggtgaaagtagtattaattagtgttgtaattgaaaaaaagtaattaatataatattgaaaagtg 15351526  T
Q  280 aaatgggtcaa------ttggacaatatttttgtgaaaatggctcagttattatgggactgagagagtataa 345  Q
    |||| | ||||      | | ||||||||||| ||  |||| |||||||||||| |||||||| ||||||||    
T  15351527 aaattgatcaatatttctagaacaatatttttttgccaatgactcagttattataggactgagggagtataa 15351598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 87 - 342
Target Start/End: Original strand, 33921420 - 33921681
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataa 185  Q
    |||||||| |||||||||||||||  | ||| |||||| ||||||||||||||| || |||||   || | || ||||||| |||||| |||||||||||    
T  33921420 ctcatttcgcacttattaagaaaaa-tatattagtgaaggagagagaaaaatggttttgagtgtgtttgttaagtattggtccattcttctttatcataa 33921518  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgg 285  Q
    ||  ||||||||||||||||||||| |||| || |||||| |||||||||  ||||||||||       |||||||||||||| ||| ||||||||||||    
T  33921519 atgtaaagtagaatatattgaattgggagttgtaaaagtagtattaattagagttataattggaaaaaagtaattaatattgttttggaaagtgaaatgg 33921618  T
Q  286 gtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggactgagagagta 342  Q
    |||||||      ||||||||||||| | |||||||||||||||||| ||||| ||| |||||    
T  33921619 gtcaatttttctgggacaatatttttttaaaaatggctcagttattacgggacggagggagta 33921681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 80 - 284
Target Start/End: Original strand, 15321169 - 15321373
Alignment:
Q  80 cccttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-cttt 178  Q
    |||||| || |||||||| |||||||||||| |||||| | |||||||||||||||| ||| ||  |||| | |||| |||||||||||| |||| ||||    
T  15321169 cccttggcttatttcacaattattaagaaaaagtgtataactgaaagagagagaaaattggttttcagtgtc-ttataaactattggtgcgttcttcttt 15321267  T
Q  179 atcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagt 278  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||| ||||||||| ||||||||||        |||||||||||  |||||||| ||    
T  15321268 atcataaatgcaaagtagaatatattgaattgagaatgttgaaagtagtattaattagtgttataattagaaaaaagtaattaatataatattgaaacgt 15321367  T
Q  279 gaaatg 284  Q
    ||||||    
T  15321368 gaaatg 15321373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 87 - 332
Target Start/End: Complemental strand, 4553058 - 4552807
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaa-gagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcata 184  Q
    ||||||||||||||||||||||||  ||||| ||| ||| ||||||||||||||| || ||||         ||||||||||||||||| ||||||||||    
T  4553058 ctcatttcacacttattaagaaaatatgtataagtaaaaagagagagaaaaatggttttgagt---------aactattggtgcattcttctttatcata 4552968  T
Q  185 aattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg-------nnnnnnngtaattaatattgtattgaaaag 277  Q
    ||| |||| ||||||||||| ||||| |||||||||||||||||||||||| |||||||||||              |||||||||||||||||||||||    
T  4552967 aatgcaaattagaatatattaaattgggagtggtgaaagtaatattaattagtgttataattgaaaggaaaaaaaaagtaattaatattgtattgaaaag 4552868  T
Q  278 tgaaatgggtcaatt------ggacaatatttttgtgaaaatggctcagttattatgggac 332  Q
    ||||||| |||||||       |||||||||||| || ||||||||| ||| |||||||||    
T  4552867 tgaaatgagtcaatttttctgagacaatatttttttgcaaatggctcggtttttatgggac 4552807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 88 - 225
Target Start/End: Complemental strand, 15355730 - 15355593
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaa 186  Q
    |||||| ||| |||||||||||| |||||| ||||||| |||||||||| ||| || ||||| | |||||||||||||||||||||| ||||||||||||    
T  15355730 tcattttacaattattaagaaaaagtgtataagtgaaaaagagagaaaattggttttgagtgtc-ttatcaactattggtgcattcttctttatcataaa 15355632  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagta 225  Q
    | |||||||||||||| ||||||||||||| ||||||||    
T  15355631 tccaaagtagaatataatgaattgagagtgttgaaagta 15355593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 166 - 292
Target Start/End: Original strand, 2310317 - 2310444
Alignment:
Q  166 gtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaata 264  Q
    ||||||||| ||||||||||||| ||| ||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||       ||||||||||    
T  2310317 gtgcattcttctttatcataaatgcaaggtataatatattgaattgggagtgatgaaagtagtattaattaatgttataattgaaaaaaagtaattaata 2310416  T
Q  265 ttgtattgaaaagtgaaatgggtcaatt 292  Q
    ||||||||||||||||||| ||||||||    
T  2310417 ttgtattgaaaagtgaaattggtcaatt 2310444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 156 - 247
Target Start/End: Original strand, 33017963 - 33018055
Alignment:
Q  156 tcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    |||| |||||||||||||| |||||||||||||  ||||||||||||||||||||| |||||||||||||| |||||||||  ||||||||||    
T  33017963 tcaagtattggtgcattcttctttatcataaatgtaaagtagaatatattgaattgggagtggtgaaagtagtattaattagagttataattg 33018055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 107 - 290
Target Start/End: Original strand, 3166078 - 3166262
Alignment:
Q  107 aaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattg 205  Q
    |||| |||||| | |||||||||||||||||| | || ||||| | ||| ||| ||||| || ||| | |||||||||||||  ||||||||||||||||    
T  3166078 aaaaagtgtataaatgaaagagagagaaaaatagttttgagtgtctttaacaagtattgatgtatttttctttatcataaatgtaaagtagaatatattg 3166177  T
Q  206 aattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaa 290  Q
    |||   || ||||||||||| |||||||||  ||||||||||       ||||||||| |||||||||||| |||||||| ||||    
T  3166178 aatgaggattggtgaaagtagtattaattagagttataattggaaaaaagtaattaatgttgtattgaaaattgaaatggatcaa 3166262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 161 - 290
Target Start/End: Original strand, 8232335 - 8232464
Alignment:
Q  161 tattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaat 259  Q
    |||||||||||||| |||||||||||||  |||||| ||||||||||||||||| | ||||||||| |||||||||   |||||||||       |||||    
T  8232335 tattggtgcattcttctttatcataaatgtaaagta-aatatattgaattgagacttgtgaaagtactattaattagaattataattggaaaaaagtaat 8232433  T
Q  260 taatattgtattgaaaagtgaaatgggtcaa 290  Q
    |||| ||||||||||||||||||||| ||||    
T  8232434 taatgttgtattgaaaagtgaaatggatcaa 8232464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 284
Target Start/End: Original strand, 3604552 - 3604748
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaa 186  Q
    ||||||||||| |||||||| ||  ||||| | | |||||||||||||||||| ||  ||| | ||| | || |||||||||||||||  ||||  ||||    
T  3604552 tcatttcacacatattaagacaaa-tgtataaataaaagagagagaaaaatggttttaagttctcttgttaagtattggtgcattctccattattgtaaa 3604650  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
    | |||||| |||||||||||||||  ||| |||||||||||||||||||  |||||||  |        |||||||||||||||||||||||||||||    
T  3604651 tgcaaagtggaatatattgaattggaagttgtgaaagtaatattaattagagttataaagggaaaaaaataattaatattgtattgaaaagtgaaatg 3604748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 88 - 231
Target Start/End: Original strand, 31075876 - 31076019
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaa 186  Q
    ||||||||| |  ||||||||||  ||||  ||||||||||||||||||||||  | ||||| | || ||||||||||||||||||  | ||||||||||    
T  31075876 tcatttcacccacattaagaaaaaatgtacaagtgaaagagagagaaaaatggtattgagtgtcttt-tcaactattggtgcattccttcttatcataaa 31075974  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatatta 231  Q
    | |||| || |||||||||||||| ||||| |||||||| |||||    
T  31075975 tacaaaatataatatattgaattgggagtgatgaaagtagtatta 31076019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 331
Target Start/End: Original strand, 9354422 - 9354646
Alignment:
Q  119 agtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattc-tctttatcataaattcaaagtagaata---tattgaattgagag 214  Q
    |||||| ||||||||||||||| || ||||| | || | || ||||||| ||||| ||||||||||||||  | |||||||||   |||||||||  |||    
T  9354422 agtgaatgagagagaaaaatggttttgagtgtctttgttaaatattggtccattcttctttatcataaatgtagagtagaatatactattgaattaggag 9354521  T
Q  215 tggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaatt------ggacaata--tttttg 306  Q
    | ||||||||| |||||||||  ||||||||||       |||||||||||| | ||| ||| ||||||| |||||||      ||||||||  |||||     
T  9354522 ttgtgaaagtagtattaattagagttataattgaaaaaaagtaattaatattattttggaaaatgaaatgagtcaatttttctaggacaatatttttttt 9354621  T
Q  307 tgaaaatggctcagttattatggga 331  Q
    ||||||| |||||||||||||||||    
T  9354622 tgaaaatagctcagttattatggga 9354646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 90 - 284
Target Start/End: Complemental strand, 31265932 - 31265739
Alignment:
Q  90 atttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataaatt 188  Q
    ||||||||| |||||||| ||  ||||| | |||| ||||||||||||| | ||  ||||| ||| | || |||||||||||||||   ||||||||||     
T  31265932 atttcacacatattaagacaaa-tgtataaatgaaggagagagaaaaatagttttaagtgctcttgttaagtattggtgcattctccactatcataaatg 31265834  T
Q  189 caaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatg 284  Q
     ||||| |||||||||||||||  ||| |||||||||||||||||||  |||||||  |        |||||||||||||||||||||||||||||    
T  31265833 taaagtggaatatattgaattggaagttgtgaaagtaatattaattagagttataa-aggaaaaaaataattaatattgtattgaaaagtgaaatg 31265739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 231
Target Start/End: Original strand, 3874020 - 3874145
Alignment:
Q  107 aaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattg 205  Q
    |||| |||||| | ||||||||||| |||||||  || ||||| | || |||| |||||||||||| | |||||||||||||  ||||| ||||||||||    
T  3874020 aaaaagtgtataaatgaaagagagaaaaaaatgattttgagtgtctttgtcaagtattggtgcattattctttatcataaatgtaaagttgaatatattg 3874119  T
Q  206 aattgagagtggtgaaagtaatatta 231  Q
    ||||  |||| |||||||||||||||    
T  3874120 aattaggagtagtgaaagtaatatta 3874145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 284
Target Start/End: Original strand, 30063995 - 30064097
Alignment:
Q  182 ataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaa 281  Q
    |||||| |||||| ||||||||||||||| ||||| ||||||||||||||||||  |||||||  |       |||||||||||||||||| ||||||||    
T  30063995 ataaatgcaaagtggaatatattgaattgggagtgatgaaagtaatattaattagagttataaagggaaaaaagtaattaatattgtattggaaagtgaa 30064094  T
Q  282 atg 284  Q
    |||    
T  30064095 atg 30064097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 117161 - 117087
Alignment:
Q  162 attggtgcattctcttt-atcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    ||||||||||||||  | ||||||||| |||||| ||||||||||||||||||||| |||||||| |||||||||    
T  117161 attggtgcattctccatgatcataaatacaaagtggaatatattgaattgagagtgatgaaagtagtattaatta 117087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 332
Target Start/End: Complemental strand, 34441940 - 34441798
Alignment:
Q  194 tagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgg--gtcaat 291  Q
    ||||||||||| |||| |||||| |||||||| |||||||||| ||||||||||       ||||||||| |||||||||||||||||||||  | | ||    
T  34441940 tagaatatattaaattaagagtgatgaaagtagtattaattaaagttataattg-aaaaaagtaattaatgttgtattgaaaagtgaaatggacgactat 34441842  T
Q  292 t----ggacaatatttttgtgaaaatggctcagttattatgggac 332  Q
    |    ||||||||||||| |  |||||||||||||||||||||||    
T  34441841 tcttaggacaatattttt-tacaaatggctcagttattatgggac 34441798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 284
Target Start/End: Original strand, 7301104 - 7301228
Alignment:
Q  161 tattggtgcattctct-ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaat 259  Q
    |||| ||||||||||  |||||||||||  ||||| |||||||||||||||| | || |||||||||||||| |||  |||||||  |        ||||    
T  7301104 tatttgtgcattctccattatcataaatgtaaagtggaatatattgaattgaaaatgatgaaagtaatattagttagagttataaagggaaaaaaataat 7301203  T
Q  260 taatattgtattgaaaagtgaaatg 284  Q
    |||||||||||||||||||||||||    
T  7301204 taatattgtattgaaaagtgaaatg 7301228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 283
Target Start/End: Complemental strand, 31723558 - 31723454
Alignment:
Q  179 atcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagt 278  Q
    |||||||||  ||| | |||||||||||||||||| |  ||||| ||||||||||||   |||||||||       ||||||||||||||||||||||||    
T  31723558 atcataaatataaattggaatatattgaattgagaataatgaaaataatattaattataattataattgaaaaaaagtaattaatattgtattgaaaagt 31723459  T
Q  279 gaaat 283  Q
    |||||    
T  31723458 gaaat 31723454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 285
Target Start/End: Original strand, 9755189 - 9755295
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaag 277  Q
    ||||||||||  | |||||||||||||||||||| | || ||||| ||||||||||||  |||||||  |       |||||||||||||||||||||||    
T  9755189 tatcataaatgtagagtagaatatattgaattgaaaatgatgaaaataatattaattacagttataa-aggaaaaaagtaattaatattgtattgaaaag 9755287  T
Q  278 tgaaatgg 285  Q
    ||||||||    
T  9755288 tgaaatgg 9755295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 87 - 283
Target Start/End: Complemental strand, 15081579 - 15081383
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctctt-tatcataa 185  Q
    |||||||||||| |||||||||||  ||||| | |||| | ||||||||||| | ||  ||||| ||| | || |||| ||||||||||   ||||||||    
T  15081579 ctcatttcacacgtattaagaaaaa-tgtataaatgaaggtgagagaaaaatagttttaagtgcacttgttaagtatttgtgcattctccactatcataa 15081481  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaat 283  Q
    |   ||||| |||||||||||||||  | |  |||||||| |||||||||  |||||||  |       |||||||||||||||||||||||||||||    
T  15081480 acgtaaagtggaatatattgaattggaaattatgaaagtagtattaattagagttataaagggaaaaaagtaattaatattgtattgaaaagtgaaat 15081383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 197 - 290
Target Start/End: Complemental strand, 20027640 - 20027547
Alignment:
Q  197 aatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaa 290  Q
    |||||| ||||||||||||||||||| ||||||||||    ||||||||||       |||||||||||||||||  |||||||||| ||||||    
T  20027640 aatatagtgaattgagagtggtgaaaataatattaatatgagttataattgaaaaaaagtaattaatattgtatttgaaagtgaaattggtcaa 20027547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 95 - 246
Target Start/End: Complemental strand, 20383993 - 20383843
Alignment:
Q  95 acacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcatt-ctctttatcataaattcaaag 193  Q
    |||| |||||||||||||| | | ||||||||||||| |||||||| || |||||  ||| |||| |||||||||||| ||| ||||| |||||  |||     
T  20383993 acacatattaagaaaaggtatgtaagtgaaagagagaaaaaaatggttttgagtg-tcttgtcaagtattggtgcattcctcattatcttaaatgaaaaa 20383895  T
Q  194 tagaatatattgaattgagagtggtgaaagtaatattaattaatgttataatt 246  Q
    ||||||||| |||||||  |||  | ||||| ||||||||||  |||||||||    
T  20383894 tagaatata-tgaattggaagtacttaaagtgatattaattagagttataatt 20383843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 8569787 - 8569838
Alignment:
Q  184 aaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    |||| ||||||  |||||||| ||||||||||||||||||||||||||||||    
T  8569787 aaatgcaaagtgaaatatattaaattgagagtggtgaaagtaatattaatta 8569838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 279
Target Start/End: Complemental strand, 26356333 - 26356234
Alignment:
Q  179 atcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagt 278  Q
    ||||||||| ||||||  |||||||||||||   |||| |||||||| |||||||||| ||||||| ||       ||||||||||||| ||||||||||    
T  26356333 atcataaatgcaaagtgaaatatattgaattagaagtgatgaaagtagtattaattaaagttataa-tgagaaaaagtaattaatattgcattgaaaagt 26356235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 16126277 - 16126219
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    ||||||||||| ||||||| ||||||||||||||  || | ||||| ||||||||||||    
T  16126277 ttatcataaatgcaaagtataatatattgaattggaagagatgaaaataatattaatta 16126219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 28539062 - 28538992
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    |||| |||||| |||||||||||||||| |||| | |||| |||||||  |||||||||  ||||||||||    
T  28539062 ttattataaatgcaaagtagaatatattaaattaaaagtgatgaaagtggtattaattagagttataattg 28538992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 34915837 - 34915886
Alignment:
Q  161 tattggtgcattctct-ttatcataaattcaaagtagaatatattgaatt 209  Q
    |||||||||||||||  ||||||||||| |||||| ||||||||||||||    
T  34915837 tattggtgcattctccattatcataaatgcaaagtggaatatattgaatt 34915886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 87 - 247
Target Start/End: Original strand, 10740 - 10902
Alignment:
Q  87 ctcatttcacacttattaagaaaagg-tgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcata 184  Q
    ||||||||||| ||||||||||||   ||| | ||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||||||||||    
T  10740 ctcatttcacagttattaagaaaaaaatgtgtaagtgaaagagagagaaaaatgggtttgagtgtccttatcaactattggttcattcttctttatcata 10839  T
Q  185 aattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    ||| ||||||| |||||||||||||  |||||||||||||| ||||||||| | |||||||||    
T  10840 aatgcaaagtaaaatatattgaattaggagtggtgaaagtagtattaattagttttataattg 10902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 161 - 244
Target Start/End: Complemental strand, 8970 - 8886
Alignment:
Q  161 tattggtgcattctctt-tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||||||||||   ||| |||||| |||||| |||||||||||||||||| || ||||||||||||||||||  |||||||    
T  8970 tattggtgcattctccactattataaatgcaaagtggaatatattgaattgagaatgatgaaagtaatattaattagagttataa 8886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 88 - 225
Target Start/End: Complemental strand, 720 - 583
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaa 186  Q
    |||||| ||| |||||||||||| |||||| ||||||| |||||||||| ||| || ||||| | |||||||||||||||||||||| ||||||||||||    
T  720 tcattttacaattattaagaaaaagtgtataagtgaaaaagagagaaaattggttttgagtgtc-ttatcaactattggtgcattcttctttatcataaa 622  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagta 225  Q
    | |||||||||||||| ||||||||||||| ||||||||    
T  621 tccaaagtagaatataatgaattgagagtgttgaaagta 583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 158 - 292
Target Start/End: Original strand, 7975 - 8110
Alignment:
Q  158 aactattggtgcatt-ctctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngt 256  Q
    ||||||||||||||| |||||||||||||||  |||||| ||||||||||||||||| | ||||||||| |||||||||| ||||||||||       ||    
T  7975 aactattggtgcatttctctttatcataaatgtaaagtaaaatatattgaattgagaattgtgaaagtagtattaattaaagttataattgggaaaaagt 8074  T
Q  257 aattaatattgtattgaaaagtgaaatgggtcaatt 292  Q
    |||| |||||||||||||||||||||| ||||||||    
T  8075 aattgatattgtattgaaaagtgaaataggtcaatt 8110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 80 - 172
Target Start/End: Original strand, 7865 - 7955
Alignment:
Q  80 cccttgactcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcatt 172  Q
    |||||||||||||||||| ||||||||||||  ||||| | ||||  ||||||||||||   || ||||||| ||||||||||||||||||||    
T  7865 cccttgactcatttcacatttattaagaaaaaatgtataaatgaa--agagagaaaaattattttgagtgcctttatcaactattggtgcatt 7955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0685 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0685
Description:

Target: scaffold0685; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 156 - 290
Target Start/End: Original strand, 6419 - 6555
Alignment:
Q  156 tcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg-nnnnnn 253  Q
    |||| ||||| |||||||| |||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||           
T  6419 tcaagtattgatgcattcttctttatcataaatgtaaagtaaaatatattgaattgagagtggtgaaagtaatattaattagagttataattgaaaaaaa 6518  T
Q  254 ngtaattaatattgtattgaaaagtgaaatgggtcaa 290  Q
     ||||||||| |||||||||||| |||||||||||||    
T  6519 agtaattaatgttgtattgaaaattgaaatgggtcaa 6555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 244
Target Start/End: Complemental strand, 5935 - 5817
Alignment:
Q  127 agagagaaaaatgggttagagtgcccttatcaactattggtgcatt-ctctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagta 225  Q
    |||||||||||||   | ||||| | ||||||| ||||| |||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  5935 agagagaaaaatgatcttgagtgtctttatcaagtattgatgcattgctctttatcataaatgtaaagtagaatatattgaattgagagtggtgaaagta 5836  T
Q  226 atattaattaatgttataa 244  Q
     |||||||||| |||||||    
T  5835 gtattaattaaagttataa 5817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 87 - 245
Target Start/End: Original strand, 12386 - 12545
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataa 185  Q
    |||||||||||| |||||||||||   |||| | |||||||||| ||| ||||| || ||||| | || |||| |||| ||||||||| |||||| ||||    
T  12386 ctcatttcacacgtattaagaaaaaacgtataaatgaaagagagtgaataatggttttgagtgtctttgtcaagtattagtgcattcttctttattataa 12485  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataat 245  Q
    ||  |||||||||||||||||||| ||| ||||||||||| |||||||||  ||||||||    
T  12486 atgtaaagtagaatatattgaattaagaatggtgaaagtagtattaattagagttataat 12545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 125 - 227
Target Start/End: Complemental strand, 220112 - 220009
Alignment:
Q  125 agagagagaaaaatgggttagagtgcccttatcaactattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaag 223  Q
    ||||||||| | |||| || ||||| ||||||||||||||  |||| ||| ||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  220112 agagagagagagatggttttgagtgtccttatcaactatttatgcaatcttctttatcataaatgcaaaatagaatatattgaattgagagtggtgaaag 220013  T
Q  224 taat 227  Q
    ||||    
T  220012 taat 220009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 352485 - 352572
Alignment:
Q  161 tattggtgcattct-ctttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||||||| |||| |||||||||||||||| ||  ||||||||||    
T  352485 tattggtgcattcttctttatcataaatgtaaagtagaatatattgaattgggagtagtgaaagtaatattaaatagagttataattg 352572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 213 - 332
Target Start/End: Complemental strand, 158057 - 157932
Alignment:
Q  213 agtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaatgggtcaa------ttggacaatatttttg 306  Q
    ||||||| |||||||||||||||  ||||||||||        |||||||||||||||||||||||||||||||||||      || ||||||||||||     
T  158057 agtggtgtaagtaatattaattagagttataattgaaaaaaaataattaatattgtattgaaaagtgaaatgggtcaatttttttttgacaatatttttt 157958  T
Q  307 tgaaaatggctcagttattatgggac 332  Q
    || ||||| |||||||||||| ||||    
T  157957 tgcaaatgactcagttattataggac 157932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 284
Target Start/End: Complemental strand, 230331 - 230216
Alignment:
Q  169 cattctct-ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattg 267  Q
    |||||||| ||||||||||| |||| | |||||||||||||||  ||| |||||||||||||||||||  |||||||  |        ||||||||||||    
T  230331 cattctctgttatcataaatgcaaaatggaatatattgaattggaagttgtgaaagtaatattaattagagttataaaagaaaaaaa-taattaatattg 230233  T
Q  268 tattgaaaagtgaaatg 284  Q
    |||||||||||||||||    
T  230232 tattgaaaagtgaaatg 230216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 87 - 283
Target Start/End: Original strand, 9504 - 9696
Alignment:
Q  87 ctcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataa 185  Q
    |||||||||||  |||||||||||   |||| | |||| ||||||||||||||| ||  ||||| ||| | || ||||  || ||||||  |||||||||    
T  9504 ctcatttcaca--tattaagaaaaaaagtataaatgaaggagagagaaaaatggttttaagtgctcttgttaagtattaatgtattctccattatcataa 9601  T
Q  186 attcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaaat 283  Q
    || |||||| ||||||   |||||||||||| |||||||| |||||||||  |||||||  |       |||||||||||||||||||||||||||||    
T  9602 atgcaaagtggaatat---gaattgagagtgatgaaagtagtattaattagagttataaagggaaaatagtaattaatattgtattgaaaagtgaaat 9696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 171292 - 171188
Alignment:
Q  177 ttatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaa 276  Q
    |||||||||||  ||||||||||||||||||||  ||||| ||||||||||||||||    ||||||||||       |||||||||||| |||||||||    
T  171292 ttatcataaatgtaaagtagaatatattgaattaggagtgatgaaagtaatattaatatgagttataattgaaaaaaagtaattaatattatattgaaaa 171193  T
Q  277 gtgaa 281  Q
    |||||    
T  171192 gtgaa 171188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 91 - 244
Target Start/End: Complemental strand, 229974 - 229822
Alignment:
Q  91 tttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctct-ttatcataaattc 189  Q
    |||||||| |||||||| ||  ||||| | |||| |||| |||||||||  ||| ||||| ||| | || |||||||||||||||  ||||||||||| |    
T  229974 tttcacacgtattaagacaaa-tgtataaatgaaggagatagaaaaatgtttta-agtgctcttgttaagtattggtgcattctccattatcataaatgc 229877  T
Q  190 aaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    ||||| | |||||||||||||  ||| ||||||||| |||||||||  |||||||    
T  229876 aaagtggtatatattgaattggaagttgtgaaagtagtattaattagagttataa 229822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 244
Target Start/End: Complemental strand, 394843 - 394777
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||||| |||||| ||||||| ||||||||||||| |||||||| |||||||||  |||||||    
T  394843 tatcataaatacaaagtggaatatagtgaattgagagtgatgaaagtagtattaattagagttataa 394777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 244
Target Start/End: Complemental strand, 98980 - 98824
Alignment:
Q  88 tcatttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaaatgggttagagtgcccttatcaactattggtgcattctcttt-atcataaa 186  Q
    ||||||||||| |||||||||||  ||||| | |||| ||||||||||||||  ||  ||||| |||   || |||||||||||| ||    || |||||    
T  98980 tcatttcacacatattaagaaaaa-tgtataaatgaatgagagagaaaaatgattttaagtgctcttgataagtattggtgcattatccaccataataaa 98882  T
Q  187 ttcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |  ||||| ||||||||||||||||||||| ||||| ||||||||||||  |||||||    
T  98881 tataaagtggaatatattgaattgagagtgatgaaaataatattaattagagttataa 98824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 26678 - 26621
Alignment:
Q  178 tatcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaatta 235  Q
    |||||||||| |||||| ||||||||||||||| ||||| |||||||| |||||||||    
T  26678 tatcataaatgcaaagtggaatatattgaattgcgagtgatgaaagtagtattaatta 26621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 244
Target Start/End: Original strand, 4295 - 4340
Alignment:
Q  199 tatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    |||||||||||||||||| ||||| ||||||||||||| |||||||    
T  4295 tatattgaattgagagtgatgaaaataatattaattaaagttataa 4340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 2711 - 2769
Alignment:
Q  189 caaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataattg 247  Q
    |||| |||||||| |||||||||||||| ||||| || |||||||||  ||||||||||    
T  2711 caaaatagaatatgttgaattgagagtgatgaaattagtattaattagagttataattg 2769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 4484 - 4438
Alignment:
Q  90 atttcacacttattaagaaaaggtgtatgagtgaaagagagagaaaa 136  Q
    ||||||||| ||||||||||| |||||| ||| ||||||||||||||    
T  4484 atttcacacatattaagaaaatgtgtataagtaaaagagagagaaaa 4438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 281
Target Start/End: Complemental strand, 4069 - 3991
Alignment:
Q  203 ttgaattgagagtggtgaaagtaatattaattaatgttataattgnnnnnnngtaattaatattgtattgaaaagtgaa 281  Q
    |||||| | ||||| |||||||| |||||||||  ||||||||||       ||||||||||||| |||||||||||||    
T  4069 ttgaatcgggagtgatgaaagtagtattaattagagttataattgaaaaaaggtaattaatattgcattgaaaagtgaa 3991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 14519 - 14455
Alignment:
Q  180 tcataaattcaaagtagaatatattgaattgagagtggtgaaagtaatattaattaatgttataa 244  Q
    ||||||||  ||||| |||||||||||||||| | || |||||||| |||||||||  |||||||    
T  14519 tcataaatgtaaagtggaatatattgaattgaaaatgatgaaagtagtattaattagagttataa 14455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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