View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8775_low_3 (Length: 309)

Name: NF8775_low_3
Description: NF8775
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8775_low_3
NF8775_low_3
[»] chr2 (22 HSPs)
chr2 (1-309)||(19716362-19716670)
chr2 (1-309)||(19720925-19721233)
chr2 (1-309)||(12577143-12577451)
chr2 (2-294)||(23274384-23274676)
chr2 (1-309)||(23097363-23097671)
chr2 (23-297)||(20848401-20848672)
chr2 (23-294)||(28350687-28350958)
chr2 (65-254)||(21901391-21901580)
chr2 (142-202)||(22462933-22462993)
chr2 (237-294)||(17002023-17002080)
chr2 (142-287)||(23116426-23116571)
chr2 (142-202)||(23205245-23205305)
chr2 (142-202)||(23676849-23676909)
chr2 (245-294)||(9338613-9338662)
chr2 (245-294)||(9487247-9487296)
chr2 (41-202)||(11351163-11351324)
chr2 (245-294)||(16984271-16984320)
chr2 (245-294)||(22322705-22322754)
chr2 (245-294)||(24265401-24265450)
chr2 (110-199)||(24657113-24657202)
chr2 (245-294)||(24713065-24713114)
chr2 (245-297)||(10871881-10871933)
[»] scaffold0058 (1 HSPs)
scaffold0058 (1-309)||(22310-22618)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-309)||(53231-53539)
[»] scaffold0067 (4 HSPs)
scaffold0067 (1-309)||(64410-64718)
scaffold0067 (1-309)||(48988-49296)
scaffold0067 (1-309)||(58022-58330)
scaffold0067 (2-309)||(29813-30120)
[»] scaffold0222 (2 HSPs)
scaffold0222 (1-309)||(295-603)
scaffold0222 (1-309)||(21002-21310)
[»] scaffold0020 (2 HSPs)
scaffold0020 (2-300)||(98400-98698)
scaffold0020 (65-309)||(176239-176483)
[»] scaffold0034 (3 HSPs)
scaffold0034 (24-309)||(11714-11999)
scaffold0034 (2-309)||(1760-2067)
scaffold0034 (23-254)||(70582-70813)
[»] scaffold0348 (2 HSPs)
scaffold0348 (1-309)||(17292-17600)
scaffold0348 (1-309)||(4657-4965)
[»] chr3 (47 HSPs)
chr3 (1-309)||(16831561-16831869)
chr3 (2-291)||(31692236-31692525)
chr3 (2-287)||(31941692-31941977)
chr3 (1-309)||(16384405-16384713)
chr3 (2-309)||(12357560-12357867)
chr3 (1-309)||(13944812-13945120)
chr3 (97-309)||(18131380-18131592)
chr3 (1-309)||(8744423-8744731)
chr3 (67-309)||(14290565-14290807)
chr3 (1-309)||(17189162-17189470)
chr3 (1-288)||(24190092-24190379)
chr3 (6-309)||(11958214-11958517)
chr3 (2-309)||(16825312-16825619)
chr3 (2-309)||(35982970-35983277)
chr3 (23-297)||(47126754-47127028)
chr3 (1-294)||(16326755-16327050)
chr3 (23-297)||(28757129-28757403)
chr3 (23-297)||(10408778-10409052)
chr3 (2-309)||(12181133-12181440)
chr3 (2-231)||(17494436-17494664)
chr3 (146-309)||(12857529-12857692)
chr3 (143-253)||(15008673-15008783)
chr3 (141-281)||(15230531-15230671)
chr3 (141-281)||(15236399-15236539)
chr3 (50-160)||(11949107-11949217)
chr3 (60-240)||(2037014-2037194)
chr3 (60-240)||(2040755-2040935)
chr3 (60-240)||(14039593-14039773)
chr3 (101-254)||(13317657-13317810)
chr3 (41-168)||(12501751-12501878)
chr3 (101-186)||(10417201-10417286)
chr3 (35-296)||(11861165-11861426)
chr3 (245-297)||(10008619-10008671)
chr3 (245-297)||(10909229-10909281)
chr3 (236-294)||(15713118-15713176)
chr3 (245-294)||(5421992-5422041)
chr3 (245-294)||(6597074-6597123)
chr3 (245-294)||(6603754-6603803)
chr3 (245-294)||(12889728-12889777)
chr3 (245-294)||(13255709-13255758)
chr3 (245-294)||(16638792-16638841)
chr3 (245-294)||(20059116-20059165)
chr3 (137-202)||(23414941-23415006)
chr3 (245-294)||(43165694-43165743)
chr3 (245-294)||(48428466-48428515)
chr3 (143-171)||(13028527-13028555)
chr3 (142-202)||(23079168-23079228)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-309)||(164209-164517)
[»] chr6 (33 HSPs)
chr6 (2-300)||(19438026-19438324)
chr6 (1-294)||(14376881-14377174)
chr6 (1-309)||(18797713-18798021)
chr6 (23-309)||(24515364-24515650)
chr6 (95-309)||(21566941-21567155)
chr6 (29-309)||(19456074-19456354)
chr6 (29-309)||(19466219-19466499)
chr6 (5-297)||(10465810-10466102)
chr6 (23-297)||(24367445-24367719)
chr6 (56-309)||(25770922-25771175)
chr6 (2-294)||(34642550-34642843)
chr6 (23-286)||(21474645-21474908)
chr6 (60-240)||(16813722-16813902)
chr6 (143-233)||(8720731-8720821)
chr6 (101-254)||(19486299-19486452)
chr6 (142-288)||(23081587-23081733)
chr6 (101-183)||(15462459-15462541)
chr6 (142-233)||(30678050-30678141)
chr6 (148-242)||(25958770-25958864)
chr6 (245-294)||(29589407-29589456)
chr6 (245-297)||(28312894-28312946)
chr6 (235-294)||(25115806-25115865)
chr6 (236-294)||(5836196-5836254)
chr6 (104-257)||(20010503-20010657)
chr6 (245-294)||(16575154-16575203)
chr6 (245-294)||(16620177-16620226)
chr6 (260-297)||(27205901-27205938)
chr6 (260-297)||(27243290-27243327)
chr6 (110-199)||(27559029-27559118)
chr6 (142-202)||(21764976-21765036)
chr6 (245-297)||(28260162-28260214)
chr6 (245-297)||(28285702-28285754)
chr6 (245-297)||(28338911-28338963)
[»] scaffold0114 (1 HSPs)
scaffold0114 (1-309)||(40246-40554)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-309)||(263414-263722)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-309)||(203569-203877)
[»] chr8 (17 HSPs)
chr8 (1-309)||(22027528-22027836)
chr8 (1-309)||(22054088-22054396)
chr8 (1-309)||(31413780-31414088)
chr8 (23-297)||(16268484-16268758)
chr8 (68-309)||(21928720-21928961)
chr8 (23-297)||(28984158-28984432)
chr8 (65-309)||(22374158-22374402)
chr8 (23-309)||(19985427-19985713)
chr8 (6-297)||(29300686-29300977)
chr8 (2-253)||(6606773-6607024)
chr8 (144-254)||(20391454-20391564)
chr8 (142-294)||(30310407-30310559)
chr8 (259-297)||(19481335-19481373)
chr8 (245-294)||(17671288-17671337)
chr8 (245-294)||(19115866-19115915)
chr8 (245-294)||(20015529-20015578)
chr8 (142-307)||(22523876-22524041)
[»] chr7 (31 HSPs)
chr7 (1-295)||(14283180-14283474)
chr7 (61-309)||(14144870-14145118)
chr7 (23-309)||(16947264-16947550)
chr7 (1-300)||(13676600-13676899)
chr7 (23-309)||(11385221-11385507)
chr7 (1-309)||(18050745-18051053)
chr7 (6-309)||(12798296-12798596)
chr7 (2-309)||(15099395-15099702)
chr7 (6-297)||(13024498-13024789)
chr7 (5-297)||(12459781-12460073)
chr7 (23-309)||(19150182-19150468)
chr7 (23-309)||(20749581-20749867)
chr7 (23-297)||(13965472-13965746)
chr7 (23-297)||(26091602-26091876)
chr7 (23-297)||(40924621-40924895)
chr7 (24-309)||(14261038-14261323)
chr7 (23-297)||(26115394-26115668)
chr7 (23-297)||(49155472-49155746)
chr7 (1-297)||(21755561-21755857)
chr7 (2-294)||(12712470-12712762)
chr7 (141-281)||(12203620-12203760)
chr7 (1-88)||(14140828-14140915)
chr7 (142-294)||(17703284-17703436)
chr7 (237-294)||(44788183-44788240)
chr7 (142-294)||(9591653-9591805)
chr7 (182-294)||(13004795-13004907)
chr7 (142-294)||(16726270-16726422)
chr7 (236-294)||(12690881-12690939)
chr7 (245-294)||(8710994-8711043)
chr7 (245-294)||(13689430-13689479)
chr7 (245-294)||(15157889-15157938)
[»] scaffold0239 (1 HSPs)
scaffold0239 (1-309)||(9595-9903)
[»] scaffold0074 (1 HSPs)
scaffold0074 (23-291)||(15282-15550)
[»] scaffold0664 (1 HSPs)
scaffold0664 (54-291)||(7279-7516)
[»] scaffold0420 (1 HSPs)
scaffold0420 (2-291)||(8803-9092)
[»] scaffold0072 (1 HSPs)
scaffold0072 (2-291)||(54236-54525)
[»] scaffold0010 (3 HSPs)
scaffold0010 (2-309)||(39141-39448)
scaffold0010 (104-202)||(180754-180852)
scaffold0010 (142-202)||(14753-14813)
[»] scaffold0235 (2 HSPs)
scaffold0235 (1-294)||(8285-8578)
scaffold0235 (1-294)||(18499-18792)
[»] chr4 (28 HSPs)
chr4 (35-309)||(16150829-16151103)
chr4 (35-309)||(16154975-16155249)
chr4 (1-309)||(53750275-53750583)
chr4 (1-309)||(51603597-51603905)
chr4 (2-309)||(14993172-14993479)
chr4 (1-294)||(20893190-20893483)
chr4 (23-297)||(11204049-11204323)
chr4 (2-309)||(15266936-15267243)
chr4 (30-309)||(18259629-18259908)
chr4 (23-297)||(3261611-3261885)
chr4 (23-297)||(7357448-7357722)
chr4 (65-309)||(15073582-15073826)
chr4 (23-297)||(29450354-29450628)
chr4 (23-297)||(44658683-44658957)
chr4 (101-254)||(27903644-27903797)
chr4 (143-267)||(8708978-8709102)
chr4 (23-253)||(13879290-13879520)
chr4 (142-294)||(13513650-13513802)
chr4 (142-294)||(14697401-14697553)
chr4 (142-202)||(18224125-18224185)
chr4 (245-294)||(8050186-8050235)
chr4 (245-294)||(12480000-12480049)
chr4 (245-294)||(14300542-14300591)
chr4 (245-294)||(16233555-16233604)
chr4 (245-294)||(17091712-17091761)
chr4 (245-294)||(19775356-19775405)
chr4 (245-294)||(23959147-23959196)
chr4 (245-294)||(27714736-27714785)
[»] scaffold0243 (1 HSPs)
scaffold0243 (2-309)||(9580-9887)
[»] chr1 (23 HSPs)
chr1 (1-309)||(24096492-24096800)
chr1 (2-309)||(20832778-20833084)
chr1 (2-309)||(21742429-21742736)
chr1 (1-309)||(21961232-21961540)
chr1 (2-309)||(21738913-21739220)
chr1 (3-309)||(19857481-19857787)
chr1 (2-309)||(22015622-22015929)
chr1 (23-297)||(31536886-31537160)
chr1 (1-297)||(20074598-20074894)
chr1 (23-297)||(20297610-20297884)
chr1 (23-297)||(38909715-38909989)
chr1 (26-297)||(52988971-52989242)
chr1 (23-297)||(48426100-48426374)
chr1 (23-297)||(37680276-37680550)
chr1 (143-253)||(18273114-18273224)
chr1 (142-295)||(21228447-21228600)
chr1 (104-257)||(20853689-20853842)
chr1 (139-307)||(16379406-16379574)
chr1 (245-297)||(51330384-51330436)
chr1 (259-297)||(41350560-41350598)
chr1 (245-294)||(33387924-33387973)
chr1 (235-307)||(21752455-21752527)
chr1 (235-295)||(22435634-22435694)
[»] scaffold0765 (1 HSPs)
scaffold0765 (1-309)||(6065-6373)
[»] chr5 (31 HSPs)
chr5 (1-309)||(17266321-17266629)
chr5 (6-297)||(23077904-23078195)
chr5 (23-297)||(20345377-20345651)
chr5 (23-297)||(22505774-22506048)
chr5 (23-297)||(25851167-25851441)
chr5 (2-309)||(23563155-23563462)
chr5 (23-297)||(14883990-14884264)
chr5 (142-309)||(21870265-21870432)
chr5 (142-309)||(21874545-21874712)
chr5 (143-253)||(23669847-23669957)
chr5 (60-240)||(16258092-16258272)
chr5 (2-253)||(43122541-43122792)
chr5 (143-240)||(22591811-22591908)
chr5 (143-240)||(22595366-22595463)
chr5 (145-254)||(21983219-21983328)
chr5 (145-254)||(21561067-21561176)
chr5 (142-288)||(26735736-26735882)
chr5 (101-186)||(20824626-20824711)
chr5 (101-186)||(28892052-28892137)
chr5 (142-202)||(18782346-18782406)
chr5 (245-297)||(27521738-27521790)
chr5 (235-294)||(22137990-22138049)
chr5 (104-186)||(20779089-20779171)
chr5 (245-294)||(14996744-14996793)
chr5 (245-294)||(16359834-16359883)
chr5 (245-294)||(22329892-22329941)
chr5 (245-294)||(27665508-27665557)
chr5 (245-294)||(27682405-27682454)
chr5 (245-294)||(34569826-34569875)
chr5 (245-294)||(40712112-40712161)
chr5 (110-202)||(20803797-20803889)
[»] scaffold0706 (1 HSPs)
scaffold0706 (1-309)||(5017-5325)
[»] scaffold0317 (1 HSPs)
scaffold0317 (1-300)||(2819-3118)
[»] scaffold0167 (1 HSPs)
scaffold0167 (2-309)||(5242-5549)
[»] scaffold0156 (1 HSPs)
scaffold0156 (2-309)||(37128-37435)
[»] scaffold0203 (1 HSPs)
scaffold0203 (1-207)||(764-970)
[»] scaffold0004 (3 HSPs)
scaffold0004 (1-243)||(325895-326136)
scaffold0004 (52-309)||(319482-319739)
scaffold0004 (101-254)||(200340-200493)
[»] scaffold0367 (1 HSPs)
scaffold0367 (2-309)||(8829-9136)
[»] scaffold0035 (1 HSPs)
scaffold0035 (2-309)||(5994-6300)
[»] scaffold0108 (1 HSPs)
scaffold0108 (2-309)||(50294-50601)
[»] scaffold0106 (1 HSPs)
scaffold0106 (2-309)||(34526-34833)
[»] scaffold1299 (1 HSPs)
scaffold1299 (1-309)||(1656-1964)
[»] scaffold0751 (1 HSPs)
scaffold0751 (23-294)||(5391-5661)
[»] scaffold1530 (1 HSPs)
scaffold1530 (108-309)||(799-1000)
[»] scaffold1517 (1 HSPs)
scaffold1517 (5-309)||(1295-1599)
[»] scaffold1433 (1 HSPs)
scaffold1433 (2-309)||(1119-1426)
[»] scaffold0404 (1 HSPs)
scaffold0404 (2-309)||(7933-8240)
[»] scaffold0310 (1 HSPs)
scaffold0310 (6-297)||(11170-11461)
[»] scaffold0266 (1 HSPs)
scaffold0266 (2-309)||(16826-17133)
[»] scaffold0053 (2 HSPs)
scaffold0053 (2-309)||(62580-62887)
scaffold0053 (2-202)||(65213-65413)
[»] scaffold1426 (1 HSPs)
scaffold1426 (23-297)||(1427-1701)
[»] scaffold1032 (1 HSPs)
scaffold1032 (2-300)||(632-930)
[»] scaffold0476 (1 HSPs)
scaffold0476 (95-309)||(353-567)
[»] scaffold0001 (1 HSPs)
scaffold0001 (23-297)||(514173-514447)
[»] scaffold0046 (1 HSPs)
scaffold0046 (2-309)||(70297-70604)
[»] scaffold0335 (1 HSPs)
scaffold0335 (2-309)||(4112-4419)
[»] scaffold0056 (1 HSPs)
scaffold0056 (2-309)||(691-998)
[»] scaffold0026 (1 HSPs)
scaffold0026 (4-309)||(51842-52147)
[»] scaffold2062 (1 HSPs)
scaffold2062 (28-300)||(689-961)
[»] scaffold0017 (2 HSPs)
scaffold0017 (69-309)||(4261-4501)
scaffold0017 (35-199)||(16984-17148)
[»] scaffold0011 (1 HSPs)
scaffold0011 (74-301)||(153753-153980)
[»] scaffold0523 (2 HSPs)
scaffold0523 (2-309)||(5629-5933)
scaffold0523 (23-297)||(11563-11837)
[»] scaffold0192 (1 HSPs)
scaffold0192 (56-309)||(29770-30023)
[»] scaffold0518 (1 HSPs)
scaffold0518 (177-309)||(2195-2327)
[»] scaffold0708 (1 HSPs)
scaffold0708 (6-280)||(4982-5256)
[»] scaffold0434 (1 HSPs)
scaffold0434 (142-309)||(5710-5877)
[»] scaffold0146 (1 HSPs)
scaffold0146 (2-309)||(92-399)
[»] scaffold0405 (1 HSPs)
scaffold0405 (59-309)||(5848-6098)
[»] scaffold0118 (1 HSPs)
scaffold0118 (23-297)||(671-945)
[»] scaffold0041 (1 HSPs)
scaffold0041 (23-297)||(41945-42219)
[»] scaffold2165 (1 HSPs)
scaffold2165 (96-297)||(623-824)
[»] scaffold0151 (1 HSPs)
scaffold0151 (95-300)||(359-564)
[»] scaffold0104 (1 HSPs)
scaffold0104 (65-309)||(43227-43471)
[»] scaffold1914 (1 HSPs)
scaffold1914 (104-309)||(1038-1243)
[»] scaffold0188 (1 HSPs)
scaffold0188 (152-309)||(33180-33337)
[»] scaffold0102 (1 HSPs)
scaffold0102 (95-299)||(42980-43184)
[»] scaffold0054 (1 HSPs)
scaffold0054 (2-254)||(63382-63634)
[»] scaffold1056 (1 HSPs)
scaffold1056 (62-309)||(1970-2215)
[»] scaffold0031 (1 HSPs)
scaffold0031 (125-309)||(115936-116120)
[»] scaffold0276 (1 HSPs)
scaffold0276 (50-297)||(23743-23990)
[»] scaffold0190 (1 HSPs)
scaffold0190 (6-297)||(30146-30437)
[»] scaffold1845 (1 HSPs)
scaffold1845 (116-294)||(1127-1305)
[»] scaffold0009 (2 HSPs)
scaffold0009 (10-297)||(251816-252103)
scaffold0009 (142-288)||(229681-229827)
[»] scaffold0261 (2 HSPs)
scaffold0261 (21-309)||(12222-12508)
scaffold0261 (21-309)||(20402-20688)
[»] scaffold0029 (2 HSPs)
scaffold0029 (2-246)||(115751-115995)
scaffold0029 (101-202)||(93809-93910)
[»] scaffold0865 (1 HSPs)
scaffold0865 (146-309)||(1080-1243)
[»] scaffold0133 (1 HSPs)
scaffold0133 (146-309)||(28093-28256)
[»] scaffold0490 (1 HSPs)
scaffold0490 (163-309)||(3215-3361)
[»] scaffold0068 (1 HSPs)
scaffold0068 (29-294)||(66931-67196)
[»] scaffold0088 (2 HSPs)
scaffold0088 (1-191)||(30122-30312)
scaffold0088 (237-294)||(30334-30391)
[»] scaffold0585 (1 HSPs)
scaffold0585 (204-309)||(668-773)
[»] scaffold0309 (1 HSPs)
scaffold0309 (2-167)||(12916-13081)
[»] scaffold0100 (1 HSPs)
scaffold0100 (142-309)||(16417-16584)
[»] scaffold0609 (2 HSPs)
scaffold0609 (143-248)||(1269-1374)
scaffold0609 (164-253)||(7908-7997)
[»] scaffold0165 (2 HSPs)
scaffold0165 (191-290)||(12322-12421)
scaffold0165 (4-135)||(12151-12282)
[»] scaffold0130 (1 HSPs)
scaffold0130 (146-281)||(3728-3863)
[»] scaffold0443 (1 HSPs)
scaffold0443 (50-192)||(12034-12176)
[»] scaffold0079 (1 HSPs)
scaffold0079 (35-295)||(36720-36980)
[»] scaffold0180 (1 HSPs)
scaffold0180 (147-233)||(30897-30983)
[»] scaffold0181 (1 HSPs)
scaffold0181 (35-168)||(28877-29010)
[»] scaffold0006 (1 HSPs)
scaffold0006 (148-288)||(104561-104701)
[»] scaffold0289 (1 HSPs)
scaffold0289 (124-295)||(99-270)
[»] scaffold0007 (1 HSPs)
scaffold0007 (235-294)||(49084-49143)
[»] scaffold0546 (1 HSPs)
scaffold0546 (142-288)||(208-354)
[»] scaffold0109 (1 HSPs)
scaffold0109 (142-288)||(12953-13099)
[»] scaffold0605 (1 HSPs)
scaffold0605 (104-257)||(1571-1724)
[»] scaffold0161 (1 HSPs)
scaffold0161 (141-230)||(36156-36245)
[»] scaffold0044 (1 HSPs)
scaffold0044 (142-295)||(17489-17642)
[»] scaffold0457 (1 HSPs)
scaffold0457 (237-297)||(13874-13934)
[»] scaffold0019 (1 HSPs)
scaffold0019 (142-184)||(171447-171489)
[»] scaffold2059 (1 HSPs)
scaffold2059 (142-287)||(599-744)
[»] scaffold0431 (1 HSPs)
scaffold0431 (245-294)||(10797-10846)
[»] scaffold0270 (2 HSPs)
scaffold0270 (142-243)||(7202-7303)
scaffold0270 (142-243)||(14332-14433)
[»] scaffold0040 (1 HSPs)
scaffold0040 (142-231)||(18174-18263)
[»] scaffold1881 (1 HSPs)
scaffold1881 (142-202)||(395-455)
[»] scaffold0509 (1 HSPs)
scaffold0509 (147-199)||(12162-12214)
[»] scaffold0285 (1 HSPs)
scaffold0285 (142-202)||(5327-5387)


Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 19716670 - 19716362
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||| ||||| |||||||||| |||||||||||||  ||| ||||||    
T  19716670 tctaaccttcttcggctgtgtgcactgcgaactgatatggccctctttgttgcagttataacaaacaacatcactacgcttgcaatcagctagagtgtgt 19716571  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    |||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  19716570 cctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggag 19716471  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || |||||||||||||||||||||||||||||| |||||||||||| ||||||  |  |||||| || ||||||||||||||||||||||||||||||||    
T  19716470 catctctcctattgggcctcctctcatcattcaatctctgctttcccttgtcaacaagggcactgtatggtttaggacgactctgctgtcccttacctct 19716371  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  19716370 tcgctcact 19716362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 19721233 - 19720925
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||| ||||| |||||||||| |||||||||||||  ||| ||||||    
T  19721233 tctaaccttcttcggctgtgtgcactgcgaactgatatggccctctttgttgcagttataacaaacaacatcactacgcttgcaatcagctagagtgtgt 19721134  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    |||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  19721133 cctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggag 19721034  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || |||||||||||||||||||||||||||||| |||||||||||| ||||||  |  |||||| || ||||||||||||||||||||||||||||||||    
T  19721033 catctctcctattgggcctcctctcatcattcaatctctgctttcccttgtcaacaagggcactgtatggtttaggacgactctgctgtcccttacctct 19720934  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  19720933 tcgctcact 19720925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 12577143 - 12577451
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||| |||| ||||| | |||||| || |||||||| || || || || |||||||||||||| |||||||||||   |||  ||||     
T  12577143 tctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtga 12577242  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || ||||| ||||| ||||| || |||||||||||||| |||||||| ||||||||||| |||||||| || |||||  | || || |||||||||||||    
T  12577243 cccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggag 12577342  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || | ||| || | ||||||||||||||||| ||||||||||| || |||||||  | |||||||||||||||||||||| |||| ||||||||||||||    
T  12577343 catccctcttactcggcctcctctcatcattaagtctctgcttacccttgtcagccggggcactatacggtttaggacgattctgatgtcccttacctct 12577442  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  12577443 tcgctcact 12577451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 2 - 294
Target Start/End: Original strand, 23274384 - 23274676
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||||||  |||| ||||||||||||||||||||||| || |||||||| || || || |  || || ||||| ||||||  ||  |||||||    
T  23274384 ctaaccttcttcggttgtgtgcactgtgaactgatatggccctcctcattgcagttatagcaaactatgtctccccgcttacaatcagctaatgtgtgtc 23274483  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    | ||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| || |||||||  ||||| || |||| ||||||    
T  23274484 ccttctgtccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctcaccacacttgttgcaaacaatttcagtaggagc 23274583  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    | ||||||| |||||||||||||||||||| |  |||||||| || ||||||| ||  ||||||||| | || ||||||||||| ||||||||    
T  23274584 atctctcctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagcactatactgcttcggacgactctgttgtccctt 23274676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 23097671 - 23097363
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    ||||| |||||| ||| | || |||||||||||||| |||||||| || |  || || ||||| ||||||||||| | |||||| | |   |  ||||||    
T  23097671 tctaatcttctttggctgagtgcactgtgaactgatgtggccctcctcatcacaattataacaaacaacatcacccctcttgcagttagccaatgtgtgt 23097572  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    ||||||||||||||| ||||||| ||||||| ||| || |||||||||||||| |||||||||||||| || |||||  | ||||| |||||||||||||    
T  23097571 cctttctgaccacacttgaagcacttcttctgatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcagcaggag 23097472  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || ||||||| |||||||||||||||||||||||||  |||||||| ||||||| || |||||| ||||| |||||  ||||||| ||| | ||||||||    
T  23097471 catctctcctcttgggcctcctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttagggagactctgatgtgctttacctct 23097372  T
Q  301 tcgctcact 309  Q
     ||||||||    
T  23097371 ccgctcact 23097363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 297
Target Start/End: Original strand, 20848401 - 20848672
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||||||||| || ||  | |||||||||||||| ||||  || ||||||||||| |||  ||   |||| || |||||||||||||||||||    
T  20848401 cactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 20848500  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| | ||| |||||| |||||||| ||||||| ||||   ||||    
T  20848501 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagc-aacaatctcaacaggagcatctctcctcttgg--atcct 20848597  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||  ||   |||||||||||||||||| ||  ||||| || || ||||||||| |||| |||||||||||    
T  20848598 atcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgttgtcccttacc 20848672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 23 - 294
Target Start/End: Original strand, 28350687 - 28350958
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||| ||||||| ||| || |||||||  || ||| | || |||| ||||||||||||||| |||  ||  || || |||||||  ||||| | |||||    
T  28350687 cactgcgaactgagatgaccttcttcgtcacaattgaagcaaacaatatcaccacgcttgcattcagctatcgtatgccctttcttcccacatcggaagc 28350786  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | || ||||||||   | | |||||||||||||||||||||||||| || |||||||| ||||| |||||||||||| || ||||||| || || |||||    
T  28350787 actttttctcatcaccattgcaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggaacatctctcctcttaggtctcct 28350886  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||| ||| ||||  |||||||||  ||  |||||||| || || |||||||  ||||| |||||    
T  28350887 ctcatcattcaatctttgctcccctttgtcaacaggagcactatagggcttcggacgaccttgctgaccctt 28350958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 65 - 254
Target Start/End: Original strand, 21901391 - 21901580
Alignment:
Q  65 acaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctt 164  Q
    |||| ||||||||||||||| |||  ||  || || |||||||  ||||| | |||||| || ||||||||   | | |||||||||||||||||||| |    
T  21901391 acaatatcaccacgcttgcattcagctatcgtatgccctttcttcccacatcggaagcactttttctcatcaccattgcaaacattactcttgtggccct 21901490  T
Q  165 tctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcag 254  Q
    |||| || |||||||| ||||| ||||||| |||| || |||| || || || |||||||||||||||| |||||| || ||||||||||    
T  21901491 tctcaccacacttgtagcaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctctgtttccctttgtcag 21901580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 22462993 - 22462933
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 202  Q
    ||||||||||||||||||||||||||| || || ||| ||||||| ||||| |||||||||    
T  22462993 acaaacattactcttgtggcctttctcaccacagttgaaacaaacaatctccgcaggagca 22462933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 17002023 - 17002080
Alignment:
Q  237 tctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    |||| |||||||| |||| || |||||| ||||| |||||||||||||||||||||||    
T  17002023 tctgttttcctttatcagcaggggcactgtacggcttaggacgactctgctgtccctt 17002080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 287
Target Start/End: Complemental strand, 23116571 - 23116426
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 241  Q
    ||||||||||||||||||||||||| | || || ||| ||||||| ||||| | ||||||| |  || | || |||| ||| |||||   || |||||||    
T  23116571 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatctctgaaggagcatccttcttcttaggccgcctatcatcgaccattctctgc 23116472  T
Q  242 tttcctttgtcagtagaggcactatacggtttaggacgactctgct 287  Q
    || || || |||| || ||||||||| || ||||| ||||||||||    
T  23116471 ttgcccttatcagcaggggcactataaggcttagggcgactctgct 23116426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 23205245 - 23205305
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 202  Q
    ||||||||||||||||||||||||||| || || ||| ||||||| ||||| | |||||||    
T  23205245 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgaaggagca 23205305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 23676849 - 23676909
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 202  Q
    ||||||||||||||||||||||||||| || || ||| ||||||| ||||| | |||||||    
T  23676849 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgaaggagca 23676909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 9338613 - 9338662
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  9338613 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 9338662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 9487247 - 9487296
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  9487247 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 9487296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 11351324 - 11351163
Alignment:
Q  41 ccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttag 140  Q
    |||||||| ||||| ||| | || |||| ||||| | |||||||||||  ||  || || || ||||  ||||||| ||| |||||||   | ||||| |    
T  11351324 ccctcttccttgcaattgaagcacacaatatcactatgcttgcaatcagctaatgtatgacccttcttgccacaccagaaacatttctctacctcctttg 11351225  T
Q  141 tacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 202  Q
     ||||||||| ||||||||||||||||| || || ||| |||| || ||||| |||||||||    
T  11351224 gacaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagca 11351163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 16984271 - 16984320
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  16984271 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 16984320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 22322754 - 22322705
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  22322754 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 22322705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 24265401 - 24265450
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||| |||| || |||||| ||||| |||||||||||||||||||||||    
T  24265401 cctttatcagcaggggcactgtacggcttaggacgactctgctgtccctt 24265450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 199
Target Start/End: Complemental strand, 24657202 - 24657113
Alignment:
Q  110 ccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcagga 199  Q
    ||||||| ||| || |||||| | |||| || ||||||| ||||||||||||||||||| || || ||| |||||   ||||||||||||    
T  24657202 ccacaccggaaacacttcttcacctcctcaggacaaacagtactcttgtggcctttctcaccacaattgaaacaagtaatctcagcagga 24657113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 24713065 - 24713114
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  24713065 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 24713114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 10871881 - 10871933
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
    ||||| |||| || |||||| ||||| |||||||||||||| |||||||||||    
T  10871881 cctttatcagcaggggcactgtacggcttaggacgactctgttgtcccttacc 10871933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 22310 - 22618
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||||| |||||||| || || ||||||||||||||||||||||||| ||||||||||    
T  22310 tctaaccttcttcggctgtgtgcactgagaactgatatggccctcttcattgcagttatagcaaacaacatcaccacgcttgcaatcaactagggtgtgt 22409  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||    
T  22410 cctttctgaccacacttgaagcatttcttctcatccttagtaaaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcaacaggag 22509  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || |||||||||||||||||||||||||||||||||| || ||||||||||| | || |||||| || ||||||||| |||||| |||||||||||| ||    
T  22510 catctctcctattgggcctcctctcatcattcagtctttgatttcctttgtcggcaggggcactgtatggtttaggaagactctactgtcccttacccct 22609  T
Q  301 tcgctcact 309  Q
    |||| ||||    
T  22610 tcgcccact 22618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 53539 - 53231
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    ||||||||||||||||  ||| || ||||||||||||||||||||||| || ||||| |||||||| || ||||||||||||||||||| |||| |||||    
T  53539 tctaaccttcttcggctatgtgcattgtgaactgatatggccctcttcattacagttataacataccacgtcaccacgcttgcaatcaactaggatgtgt 53440  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||| |||    
T  53439 cctttttgaccacacctgaatcatttcttctcatccttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatcccagcaagag 53340  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || |||||||||||||||||||||||||||||| |||||||||||| ||||||| || |||||| || ||||||||||||   || ||||||||| ||||    
T  53339 catctctcctattgggcctcctctcatcattcaatctctgctttcccttgtcagcaggggcactgtatggtttaggacgaacttgatgtcccttatctct 53240  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  53239 tcgctcact 53231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 193; Significance: 1e-105; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 64718 - 64410
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||  |||| ||||||||||| |||||||||||||| |  || || || || || ||||||||||||||||||| |  ||| ||||||    
T  64718 tctaaccttcttcggttgtgtgcactgtgaactaatatggccctcttcatcacaattatagcaaactacatcaccacgcttgcaattagctagtgtgtgt 64619  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||    
T  64618 cctttctgaccacacctgaaacatttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttgtaacaaactatctcagcaggag 64519  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || | |||||||| |||||||| ||||||||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  64518 catccctcctattcggcctcctttcatcattcagtctctgctttcccttgtcagccggggcactatacggtttaggacgactctgctgtcccttacctct 64419  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  64418 tcgctcact 64410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 49296 - 48988
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||  |||| ||||||||||| |||||||||||||| |  || || || || || ||||||||||||||||||| |  ||| ||||||    
T  49296 tctaaccttcttcggttgtgtgcactgtgaactaatatggccctcttcatcacaattatagcaaactacatcaccacgcttgcaattagctagtgtgtgt 49197  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| || |||||||||||||| |||||||||||||    
T  49196 cctttctgaccacacctgaaacatttcttctcatccttggtacaaacattactcttgtggcccttctcgccacacttgtaacaaactatctcagcaggag 49097  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || | |||||||| |||||||| ||||||||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  49096 catccctcctattcggcctcctttcatcattcagtctctgctttcccttgtcagccggggcactatacggtttaggacgactctgctgtcccttacctct 48997  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  48996 tcgctcact 48988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 58330 - 58022
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||  |||| ||||||||||| |||||||||||||| |  || || || || || ||||||||||||||||||| |  ||| ||||||    
T  58330 tctaaccttcttcggttgtgtgcactgtgaactaatatggccctcttcatcacaattatagcaaactacatcaccacgcttgcaattagctagtgtgtgt 58231  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| || |||||||||||||| |||||||||||||    
T  58230 cctttctgaccacacctgaaacatttcttctcatccttggtacaaacattactcttgtggcccttctcgccacacttgtaacaaactatctcagcaggag 58131  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || | |||||||| |||||||| ||||||||||||||||||||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||||    
T  58130 catccctcctattcggcctcctttcatcattcagtctctgctttcccttgtcagccggggcactatacggtttaggacgactctgctgtcccttacctct 58031  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  58030 tcgctcact 58022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 309
Target Start/End: Original strand, 29813 - 30120
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||||||  | || ||||| ||||||||||| || || || |||||  | ||||| || |  || |||| ||| ||||||  ||| |||||||    
T  29813 ctaaccttcttcggttgcgtacactgcgaactgatatgaccttcctcattgcaaatataacaaacgatgtccccacacttacaatcagctagagtgtgtc 29912  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    | || ||||||||||||||||| |||||||||||  ||  |||||| |||||||||||||||||||| || |||||| | ||||| || |||| |||| |    
T  29913 ccttttgaccacacctgaagcacttcttctcatctctatcacaaacgttactcttgtggcctttctcaccacacttgaagcaaactatgtcagtaggaac 30012  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
    | ||||||| |||||||||||||||||||| |  |||||||| || ||||||| ||  ||||||||||| || |||||||||||||||||||| |||||     
T  30013 atctctcctcttgggcctcctctcatcatttaaactctgcttacccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgcctcta 30112  T
Q  302 cgctcact 309  Q
    ||||||||    
T  30113 cgctcact 30120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 189; Significance: 1e-102; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 603 - 295
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| |||||||| || || ||||||||||||||||||||||||  |||| |||||    
T  603 tctaaccttcttcggctgtgtgcactgtgaactgatatggccctcttcattgcagttatagcaaacaacatcaccacgcttgcaatcagctaggctgtgt 504  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    |||||||||||||||||||| || |||||||||||||| |||||||||| ||||||||||||||||   || || |||||||||||||||||||||||||    
T  503 cctttctgaccacacctgaaacacttcttctcatccttggtacaaacatcactcttgtggcctttcctgccacatttgtaacaaacgatctcagcaggag 404  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || |||||||||||||||||||||||||||||| | |||||||||| ||||||| || |||||| ||||| |||||  ||||||| ||||||||||||||    
T  403 catctctcctattgggcctcctctcatcattcaatatctgctttcccttgtcagcaggggcactgtacggcttagggtgactctgttgtcccttacctct 304  T
Q  301 tcgctcact 309  Q
    ||| |||||    
T  303 tcgttcact 295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 21002 - 21310
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||  |||| ||||||||||||||| ||||||| || |||||||| || || |  |  || || ||||| ||||||| ||  ||||||    
T  21002 tctaaccttcttcggttgtgtacactgtgaactgatacggccctcctcattgcagttatagcaaattatgtctccccgcttacaatcaactaatgtgtgt 21101  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || ||||| |||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||| || |||||||| ||||| |||||||||| ||    
T  21102 cccttctgtccacacctgaagcacttcttctcacctttagtacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcagaag 21201  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || ||||||| ||||||||||||||||||||||| ||||| ||||||||||||| || |||||||||||||||||||||||||| ||||||||| ||| |    
T  21202 catctctcctcttgggcctcctctcatcattcagcctctgttttcctttgtcagcaggggcactatacggtttaggacgactctactgtcccttgccttt 21301  T
Q  301 tcgctcact 309  Q
     ||||||||    
T  21302 acgctcact 21310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 187; Significance: 1e-101; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 2 - 300
Target Start/End: Complemental strand, 98698 - 98400
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||||||    
T  98698 ctaaccttcttcggctgtgtgcactgcgaactgatatggccctcttcgttgcagttataacatacaacatcaccacgcttgcaatcagctagagtgtgtc 98599  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  98598 ctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagc 98499  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    | ||||||  |||||||||||||||||||| |  |||||||| || ||||||| |   |||||||| || || ||||||||||| ||||||||||||||    
T  98498 atctctccacttgggcctcctctcatcatttaacctctgcttacccttgtcagcatgagcactatatggcttcggacgactctgttgtcccttacctct 98400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 65 - 309
Target Start/End: Original strand, 176239 - 176483
Alignment:
Q  65 acaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctt 164  Q
    ||||||||||||||||||||||||  ||  |||||||||||||  |||||||| || || |||||||||||      ||| |||||||||||||||||||    
T  176239 acaacatcaccacgcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggcctt 176338  T
Q  165 tctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcact 264  Q
    | || || |||||| |||| || ||||| | ||||||| |||||||  | |||||||||||||||||||||||||| ||  ||||||  | ||  |||||    
T  176339 tttcaccacacttgaaacagacaatctctgtaggagcatctctcctcctaggcctcctctcatcattcagtctctgtttaactttgttggcaggagcact 176438  T
Q  265 atacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||    
T  176439 atacggtttcggacgactctgctgtcccttacctctacgctcact 176483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 186; Significance: 1e-101; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 24 - 309
Target Start/End: Complemental strand, 11999 - 11714
Alignment:
Q  24 actgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagca 123  Q
    |||| ||||||||||| || |||||||| ||  ||||||| ||||  ||||||||||||||||||  ||| |||||||||||||||||||||||||||||    
T  11999 actgcgaactgatatgaccttcttcgttccaaatgtaacaaacaatgtcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagca 11900  T
Q  124 tttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctc 223  Q
     ||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||| ||||||| ||||||||||||    
T  11899 cttcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagtaggagcatctctcctcttgggcctcctc 11800  T
Q  224 tcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    |||||||| |||||||||||||||||||||| ||  |||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  11799 tcatcattaagtctctgctttcctttgtcagcaggagcactatatggtttaggacgactctgctgtcccttacctcttctctcact 11714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 2 - 309
Target Start/End: Complemental strand, 2067 - 1760
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||||||  |||| ||||| ||||||||||| || || || |||||||| || || ||||| || || ||||| ||||||  ||  |||||||    
T  2067 ctaaccttcttcggttgtgtacactgcgaactgatatgaccttcctcattgcagttatagcaaacaacgtctccccgcttacaatcagctaatgtgtgtc 1968  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    |||||||||||||||||||||| ||||||||||| |||  ||||||||||||||||||||||||||| || |||||||| ||||| || |||||||||||    
T  1967 ctttctgaccacacctgaagcacttcttctcatctttatcacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatttcagcaggagc 1868  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
    | || |||| ||||||||||||||||||||||| ||||| ||||||||||||| ||  |||||||| ||||||||| ||||||||||||||||||||||     
T  1867 atctatcctcttgggcctcctctcatcattcagcctctgttttcctttgtcagcaggagcactatatggtttaggatgactctgctgtcccttacctctg 1768  T
Q  302 cgctcact 309  Q
    ||||||||    
T  1767 cgctcact 1760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 254
Target Start/End: Original strand, 70582 - 70813
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||| || |||||||| || || ||||| ||||| |||| ||| ||||||||||| |||   |     || ||||| ||||| || ||||| |    
T  70582 cactgtgaactaatgtggccctcctcattacagttataacaaacaatatctccacgcttgcattcagccaacacatgacctttatgaccgcatctgaaac 70681  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||||||||||| || || || ||||||| ||||||||||||| | || |||||||||||||| |  ||| |||||||| ||||||   | |||| |||    
T  70682 acttcttctcatctttggtgcagacattacccttgtggcctttcgcaccacacttgtaacaaacaacatcaacaggagcatctctccccctaggccgcct 70781  T
Q  223 ctcatcattcagtctctgctttcctttgtcag 254  Q
    ||||||||||| ||| || |||||||||||||    
T  70782 ctcatcattcaatctttgttttcctttgtcag 70813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 185; Significance: 1e-100; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 17600 - 17292
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||| |||| ||||| | |||||||||||||||||||||||| |||||||||||||||||||||||| || ||||   ||  |||||     
T  17600 tctaaccttcttcggctgtgtacactgagtactgatatggccctcttcgttgcaattgtaacatacaacatcaccacgcatgtaatccgctaatgtgtga 17501  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || || ||| ||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| || ||||| |||||||| |||||||||||||    
T  17500 cccttttgatcacacctaaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttataacaaactatctcagcaggag 17401  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || |||||||||| ||||||||||||||||||||||| || ||||| ||||||| || |||||| |||||||||||||||||||||||||||||||||||    
T  17400 catctctcctattcggcctcctctcatcattcagtctttgttttcccttgtcagcaggggcactgtacggtttaggacgactctgctgtcccttacctct 17301  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  17300 tcgctcact 17292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 4965 - 4657
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||| ||||| |||| ||||| | ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||  ||   ||||     
T  4965 tctaaccttcctcggctgtgtacactgagtactgatatggccctcctcgttgcagttataacatacaacatcaccacgcttgcaatcagctaacatgtga 4866  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || ||||| |||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||  || ||||| ||||| || |||||||||||||    
T  4865 cccttctgtccacacctgaagcacttcttctcatctttggtacaaacattactcttgtggcctttctggccacacttataacagactatctcagcaggag 4766  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || |||||||||| ||||||||||||||||||||||| |||||||| ||||||  || |||||| |||||||||||||||||||||||||||||||||||    
T  4765 catctctcctatttggcctcctctcatcattcagtctttgctttcccttgtcaaaaggggcactgtacggtttaggacgactctgctgtcccttacctct 4666  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  4665 tcgctcact 4657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 16831869 - 16831561
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||   ||    |||     
T  16831869 tctaaccttcttcggctgtgtgcactgtgtactgatatggccctcttcgttgcagttataacatacaacatcaccacgcttgcagtccgctaacacgtga 16831770  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| || |||||  ||||||| |||||||||||||    
T  16831769 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 16831670  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || |||||||||| ||||||||||||||||| ||||||||||| || || |||| || |||||||||||| |||||| ||||||||||||||||||||||    
T  16831669 catctctcctattcggcctcctctcatcattaagtctctgcttacccttatcagcaggggcactatacggcttaggatgactctgctgtcccttacctct 16831570  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  16831569 tcgctcact 16831561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 2 - 291
Target Start/End: Complemental strand, 31692525 - 31692236
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||||||| | || ||||||||||||||||||||||| || |||||||| ||||| ||||||||||||| |||||| |||  ||| |||||||    
T  31692525 ctaaccttcttcggctgcgtacactgtgaactgatatggccctcctcattgcagttataacaaacaacatcaccactcttgcagtcagctagagtgtgtc 31692426  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    | |||| |||||||||||| || ||||||||||| || ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||    
T  31692425 ccttctaaccacacctgaaacacttcttctcatctttggtacaaacattactcttgtggcctttctcaccacacttgtaacaaacgatctcagcagaagc 31692326  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcc 291  Q
    |  |||||||||||||||||||||||||||||   ||||||| |||||||||| ||  ||||||||||| || |||||||||||||||||    
T  31692325 atttctcctattgggcctcctctcatcattcaacttctgcttccctttgtcagcaggagcactatacggcttcggacgactctgctgtcc 31692236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 2 - 287
Target Start/End: Original strand, 31941692 - 31941977
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||||||| | || |||| |||||||||||||||||| || ||||| || ||||| |||||||||||||||||||| |||  ||| |||||||    
T  31941692 ctaaccttcttcggctgcgtacactatgaactgatatggccctcctcattgcaattataacaaacaacatcaccacgcttgcagtcagctagagtgtgtc 31941791  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    | ||||||||||||||||| || ||||||||||| || ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  31941792 ccttctgaccacacctgaaacacttcttctcatctttggtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggagc 31941891  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgct 287  Q
    |  |||||||||||||||||||||||||||||   ||||||| |||||||||| ||  ||||||||||| || |||||||||||||    
T  31941892 atttctcctattgggcctcctctcatcattcaacttctgcttccctttgtcagcaggagcactatacggcttcggacgactctgct 31941977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 16384713 - 16384405
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||| |||| ||||| | |||||||||||||||||| || || || || |||||||||||||||||||||||||||   |   ||||     
T  16384713 tctaaccttcttcggctgtgtgcactgagtactgatatggccctcttcattacaattatagcatacaacatcaccacgcttgcaatcagccaacatgtga 16384614  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||| ||||||| || |||||  ||||||| |||||||||||||    
T  16384613 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggactttctcgccacacttaaaacaaactatctcagcaggag 16384514  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || |||||||||| ||||||||||||||||| ||||||||||| || ||||||| || |||||| || || |||||||||||||| ||||||||||||||    
T  16384513 catctctcctattcggcctcctctcatcattaagtctctgcttacccttgtcagcaggggcactgtatggcttaggacgactctgttgtcccttacctct 16384414  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  16384413 tcgctcact 16384405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 2 - 309
Target Start/End: Complemental strand, 12357867 - 12357560
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||||||  |||| ||||| ||||||||||| || || || |||||||| || || ||||| || || ||||| ||||||  ||  |||||||    
T  12357867 ctaaccttcttcggttgtgtacactgcgaactgatatgaccttcctcattgcagttatagcaaacaacgtctccccgcttacaatcagctaatgtgtgtc 12357768  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    |||||||||||||||||||||| ||||||||||| |||  ||| |||||||||||||||||||| || || |||||||| ||||| |||||||||||||     
T  12357767 ctttctgaccacacctgaagcacttcttctcatctttatcacagacattactcttgtggcctttttcgccacacttgtagcaaacaatctcagcaggagt 12357668  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
    | ||||||| ||||||||||||||||||||||| |||| |||||| ||||||| ||  |||||||| ||||||||||||||||| ||||||||||||||     
T  12357667 atctctcctcttgggcctcctctcatcattcagcctctactttcccttgtcagcaggagcactatatggtttaggacgactctgatgtcccttacctctg 12357568  T
Q  302 cgctcact 309  Q
    ||||||||    
T  12357567 cgctcact 12357560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 13944812 - 13945120
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||| |||| ||||| | |||||| ||||||||||| || || || || |||||||||||||| |||||||||||   |||  ||||     
T  13944812 tctaaccttcttcggctgtgtgcactgagtactgatgtggccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtga 13944911  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || ||||| ||||| ||||| || |||||||||||||| |||||||| ||||||||||| |||||||| || |||||  | || || |||||||||||||    
T  13944912 cccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggag 13945011  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || | ||| || | ||||||||||||||||| ||||||||||| || || ||||| | |||||||||||||||||||||| |||| ||||||||||||||    
T  13945012 catccctcttactcggcctcctctcatcattaagtctctgcttacccttatcagtcggggcactatacggtttaggacgattctgatgtcccttacctct 13945111  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  13945112 tcgctcact 13945120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 97 - 309
Target Start/End: Complemental strand, 18131592 - 18131380
Alignment:
Q  97 gtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagca 196  Q
    ||||||||||||||||||||||||||| ||||||||||| |||  ||||||||||||||||||||||||||| || |||||||| ||| | |||||| ||    
T  18131592 gtgtcctttctgaccacacctgaagcacttcttctcatctttatcacaaacattactcttgtggcctttctcgccacacttgtagcaatcaatctcaaca 18131493  T
Q  197 ggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttac 296  Q
    |||||| ||||||| |||||||||||||||| |||||||||||| ||||||||||||| ||  |||||||| ||||||||||||||||||||||| ||||    
T  18131492 ggagcatctctcctcttgggcctcctctcattattcagtctctgttttcctttgtcagcaggagcactatatggtttaggacgactctgctgtcctttac 18131393  T
Q  297 ctcttcgctcact 309  Q
    |||| || |||||    
T  18131392 ctctccgttcact 18131380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 8744731 - 8744423
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||  |||| ||||| | |||||| ||||||||||| || || || || |||||||||||||| |||||||||||   |||  ||||     
T  8744731 tctaaccttcttcggttgtgtgcactgagtactgatgtggccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtga 8744632  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || ||||| ||||| ||||| || |||||||||||||| |||||||| ||||||||||| |||||||| || |||||  | || || |||||||||||||    
T  8744631 cccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggag 8744532  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || | ||| || | ||||||||||||||||| ||||||||||| || || ||||| | |||||||||||||||||||||| |||| ||||||||||||||    
T  8744531 catccctcttactcggcctcctctcatcattaagtctctgcttacccttatcagtcggggcactatacggtttaggacgattctgatgtcccttacctct 8744432  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  8744431 tcgctcact 8744423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 67 - 309
Target Start/End: Complemental strand, 14290807 - 14290565
Alignment:
Q  67 aacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttc 166  Q
    |||||| |||||||| ||||||  ||  |||||||||||||| |||||||| ||||| |||||||||||   |  ||| |||||||||||||||||||||    
T  14290807 aacatccccacgcttacaatcagctaaagtgtgtcctttctgtccacacctaaagcacttcttctcatctcaatcacacacattactcttgtggcctttc 14290708  T
Q  167 tctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactat 266  Q
    || || |||||| | ||||  ||||||| ||||||| ||||||| || |||||||||||||||||||| ||||| || |||||||||| ||  |||||||    
T  14290707 tcaccacacttgaagcaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactat 14290608  T
Q  267 acggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    ||||||| |||||||||||||||||||||||||| ||||||||    
T  14290607 acggtttcggacgactctgctgtcccttacctctgcgctcact 14290565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 17189162 - 17189470
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    ||||| |||||| ||| | || |||||||||||||| |||||||| || |  || || ||||| ||||||||||| | |||||| | |   |  ||||||    
T  17189162 tctaatcttctttggctgagtacactgtgaactgatgtggccctcctcatcacaattataacaaacaacatcaccccacttgcagttagccaacgtgtgt 17189261  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    ||||||||||||||||||||||| ||||||||||| || |||||||| ||||| |||||||||||||| || |||||  ||||||| || ||| ||||||    
T  17189262 cctttctgaccacacctgaagcacttcttctcatctttggtacaaacgttacttttgtggcctttctcgccacacttaaaacaaacaatatcaacaggag 17189361  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || ||||||| |||| ||||||||||||||| | |||||||||||| |||| || ||  ||||| ||||| || |||||||||||||| ||||| |||||    
T  17189362 catctctcctcttggacctcctctcatcattaaatctctgctttcccttgttagcaggagcactgtacggcttcggacgactctgctggcccttgcctct 17189461  T
Q  301 tcgctcact 309  Q
     || |||||    
T  17189462 gcggtcact 17189470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 24190092 - 24190379
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    ||||| |||||| ||| | || |||||||||||||| |||||||| || |  || || ||||| ||||||||||| | |||||| | |   |  ||||||    
T  24190092 tctaatcttctttggctgagtacactgtgaactgatgtggccctcctcatcacaattataacaaacaacatcaccccacttgcagttagccaacgtgtgt 24190191  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    ||||||||||||||||||||||| ||||||||||| || |||||||| ||||| |||||||||||||| || |||||  ||||||| || ||| ||||||    
T  24190192 cctttctgaccacacctgaagcacttcttctcatctttggtacaaacgttacttttgtggcctttctcgccacacttaaaacaaacaatatcaacaggag 24190291  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctg 288  Q
    || ||||||| |||  ||||||||||||||||| |||||||||||| ||||||| ||  ||||| ||||| || ||||||||||||||    
T  24190292 catctctcctcttgtacctcctctcatcattcaatctctgctttcccttgtcagcaggagcactgtacggcttcggacgactctgctg 24190379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 6 - 309
Target Start/End: Complemental strand, 11958517 - 11958214
Alignment:
Q  6 ccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtccttt 105  Q
    ||||||||||| | || |||| |||||||||||| |  ||||||||||||||||| || ||||  ||  ||||||| || |||  ||| || ||||||||    
T  11958517 ccttcttcggctgagtacactatgaactgatatgactttcttcgttgcagttgtagcagacaatgtcctcacgcttacattcagctagtgtatgtccttt 11958418  T
Q  106 ctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagct 205  Q
    ||||||||||||||| || ||| |||||||  ||  |||| |||| || ||||||||||| || || ||||| |||||||| || |||||||||||| ||    
T  11958417 ctgaccacacctgaaacacttcctctcatctctaccacaagcattgcttttgtggcctttttcaccacacttataacaaacaatttcagcaggagcatct 11958318  T
Q  206 ctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgct 305  Q
    ||||| ||  ||||||| |||||||||| |||||| || |||||||||| ||  ||||| || |||||||||||| ||||||||||||||||||| | ||    
T  11958317 ctcctcttaagcctcctatcatcattcattctctgtttccctttgtcagcaggagcactgtaaggtttaggacgattctgctgtcccttacctctcctct 11958218  T
Q  306 cact 309  Q
    ||||    
T  11958217 cact 11958214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 309
Target Start/End: Complemental strand, 16825619 - 16825312
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||| ||| | || |||||  |||||||||| || || || ||| ||||||| || ||||  || |||||||| ||||||  ||  |||||||    
T  16825619 ctaaccttcttaggctgcgtacactgcaaactgatatgaccttcctcattgaagttgtagcaaacaatgtccccacgcttacaatcagctaaagtgtgtc 16825520  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    |||| | ||||||||||||||| |||||||||||      |||||||||||||||||||||||| || || |||||| ||||||| || |||| ||||||    
T  16825519 cttttttaccacacctgaagcacttcttctcatcacggtcacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagc 16825420  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
    | ||||| | ||||||||||||||||| |||| ||||| ||| || ||||||| || |||||||||||| || ||||||||| |||||||||| |||||     
T  16825419 atctctcatcttgggcctcctctcatctttcaatctctacttacccttgtcaggaggggcactatacggcttcggacgactcagctgtcccttgcctctg 16825320  T
Q  302 cgctcact 309  Q
    ||||||||    
T  16825319 cgctcact 16825312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 2 - 309
Target Start/End: Original strand, 35982970 - 35983277
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||| ||| | || || || ||||| ||||| || || || || |||||||| || |||| ||| |||||||||||||||   |  |||||||    
T  35982970 ctaaccttcttaggctgcgtacaatgcgaactaatatgtccttcctcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtc 35983069  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagt-acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    ||||||| ||||| ||||| || ||||||||||| |  || ||| ||||||||||||||||||||||| || |||||| | ||||  ||| ||| |||||    
T  35983070 ctttctgtccacatctgaaacacttcttctcatc-tcggtcacacacattactcttgtggcctttctcaccacacttgaagcaaataatcacagtaggag 35983168  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || ||||||| || |||||||||||||||||||| ||||| || |||||||||| ||  |||||||||||||| |||| |||||||||||||||||||||    
T  35983169 catctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactatacggtttcggacaactctgctgtcccttacctct 35983268  T
Q  301 tcgctcact 309  Q
     | ||||||    
T  35983269 gcactcact 35983277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 297
Target Start/End: Original strand, 47126754 - 47127028
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||||||||| || ||  | |||||||||||||| ||||  || ||||||||||| |||  ||   |||| || |||||||||||||||||||    
T  47126754 cactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 47126853  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||| |||||||| ||||||| |||||||||||    
T  47126854 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 47126953  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||  ||  ||||||||||||||||||| ||  ||||| || || ||||||||| |||| |||||||||||    
T  47126954 atcatcacccatcctctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgttgtcccttacc 47127028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 16327050 - 16326755
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    ||||||||||||||||   || ||||| ||||||||||| |||||| | ||||||||||| || ||||  || |||||||| || |||  ||   |||||    
T  16327050 tctaaccttcttcggcttagtacactgcgaactgatatgaccctctccattgcagttgtagcagacaatgtccccacgcttacattcagctaaattgtgt 16326951  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacga-tctcagcagga 199  Q
    || ||||||||||||||||| |||||| |||||||  ||  ||||||||| |||||||||||||| || || ||||| |||||||| | |||||||||||    
T  16326950 cccttctgaccacacctgaaacatttcctctcatctctaccacaaacattgctcttgtggcctttttcaccacacttataacaaacaagtctcagcagga 16326851  T
Q  200 gcag-ctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    |||| ||||||| ||||| ||||| ||||||||||   | |||||||||||||||| ||  ||||| |  || |||||||||||||||||||||||    
T  16326850 gcagtctctcctcttgggtctcctatcatcattcaccttttgctttcctttgtcagcaggagcactgtcaggcttaggacgactctgctgtccctt 16326755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 23 - 297
Target Start/End: Original strand, 28757129 - 28757403
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||| ||||| || ||| | ||||| |||||||| ||||  || ||||||||||| |||  ||   |||| || |||||||||||||||||||    
T  28757129 cactgtgaactaatatgaccttctccattgcaattgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 28757228  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||| |||||||| ||||||| |||||||||||    
T  28757229 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 28757328  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||  ||   |||||||||||||||||| ||  ||||| || || ||||||||| |||| |||||||||||    
T  28757329 atcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgttgtcccttacc 28757403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 23 - 297
Target Start/End: Original strand, 10408778 - 10409052
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||||||||| || ||  | |||||||||||||| ||||  || ||||||||||| |||  ||   |||| || |||||||||||||||||||    
T  10408778 cactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 10408877  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| | |||||  |   ||||||||||||||||||||||||||| || || ||||||||||| |||||||| |||||| ||||||| |||||||||||    
T  10408878 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacatttgtaacaaacaatctcagctggagcatctctcctcttgggcctcct 10408977  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||  ||   |||| || || ||||||| ||  ||||| || || |||||||||||||| |||||||||||    
T  10408978 atcatcacccatcttctgtttacccttgtcagcaggagcactgtaaggcttaggacgactctggtgtcccttacc 10409052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 309
Target Start/End: Original strand, 12181133 - 12181440
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||||||  | || ||||  ||||||||||| || || | |||||| || ||||| ||||  || ||| |||| ||||||  ||| |||||||    
T  12181133 ctaaccttcttcggttgcgtacactacgaactgatatgaccttccttgttgcaattataacaaacaatgtccccaagcttacaatcagctagtgtgtgtc 12181232  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    ||||| ||||||| |||||||| |||||||||||  ||  ||| || ||||||||||||||||| || || |||||| | ||||  || |||| ||||||    
T  12181233 ctttccgaccacaactgaagcacttcttctcatctctatcacagactttactcttgtggcctttttcaccacacttgaagcaaaaaatgtcagtaggagc 12181332  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
    | ||||||| |||| ||||||||||||||| |  |||| ||| || ||||||| ||  ||||||||||| ||  |||||||||| |||||||| ||||||    
T  12181333 atctctcctcttggtcctcctctcatcatttaacctctacttacccttgtcagcaggagcactatacggcttcagacgactctgttgtcccttgcctctt 12181432  T
Q  302 cgctcact 309  Q
    || |||||    
T  12181433 cgttcact 12181440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 2 - 231
Target Start/End: Original strand, 17494436 - 17494664
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||||||  | || ||||| ||||| ||||| || || ||||||||||| || || ||||  || |||| ||| || |||  ||| |||||||    
T  17494436 ctaaccttcttcggttgagtacactgcgaactaatatgaccttcctcgttgcagttatagcaaacaatgtctccacacttacagtcagctagtgtgtgtc 17494535  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    |||||||||||||||||| ||| |||||||||||  ||  |||||||||||||||||||||||| || || || ||| | ||||| ||||||| | ||||    
T  17494536 ctttctgaccacacctga-gcacttcttctcatctctatcacaaacattactcttgtggcctttttcaccacatttgaagcaaacaatctcagtatgagc 17494634  T
Q  202 agctctcctattgggcctcctctcatcatt 231  Q
    | ||||||| ||||||||||||||||||||    
T  17494635 atctctcctcttgggcctcctctcatcatt 17494664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 146 - 309
Target Start/End: Complemental strand, 12857692 - 12857529
Alignment:
Q  146 acattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttc 245  Q
    ||||||||| ||||||| || || || |||||| |||| || ||||||| ||||||| ||||||| || ||||||||||||||||||||||  || || |    
T  12857692 acattactcatgtggcccttttcaccacacttgaaacagacaatctcagtaggagcatctctccttttaggcctcctctcatcattcagtccttgtttac 12857593  T
Q  246 ctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    ||||||||| ||  |||||||||||||| |||||||||| ||||||||| ||||| ||||||||    
T  12857592 ctttgtcagcaggagcactatacggttttggacgactctactgtcccttgcctctacgctcact 12857529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 143 - 253
Target Start/End: Complemental strand, 15008783 - 15008673
Alignment:
Q  143 caaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgct 242  Q
    ||||||||||||||||||||| |||| || |||||||| ||||| |||||||||||| || ||||||| || || |||||||||||||||| ||| ||||    
T  15008783 caaacattactcttgtggcctctctcaccacacttgtagcaaacaatctcagcaggaacatctctcctcttaggtctcctctcatcattcaatctttgct 15008684  T
Q  243 ttcctttgtca 253  Q
     ||||||||||    
T  15008683 ctcctttgtca 15008673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 15230531 - 15230671
Alignment:
Q  141 tacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 240  Q
    |||||||||||||||||||||| || || || |||||||| ||||| |||||||||||| || || | || || ||||||||||||||||| | ||| ||    
T  15230531 tacaaacattactcttgtggcccttttcaccacacttgtagcaaacaatctcagcaggaacatcttttctcttaggcctcctctcatcatttaatctttg 15230630  T
Q  241 ctttcctttgtcagtagaggcactatacggtttaggacgac 281  Q
    ||| |||||||||| ||  |||||||| || ||||||||||    
T  15230631 cttccctttgtcagcaggagcactatagggcttaggacgac 15230671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 15236399 - 15236539
Alignment:
Q  141 tacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 240  Q
    |||||||||||||||||||||| || || || |||||||| ||||| |||||||||||| || || | || || ||||||||||||||||| | ||| ||    
T  15236399 tacaaacattactcttgtggcccttttcaccacacttgtagcaaacaatctcagcaggaacatcttttctcttaggcctcctctcatcatttaatctttg 15236498  T
Q  241 ctttcctttgtcagtagaggcactatacggtttaggacgac 281  Q
    ||| |||||||||| ||  |||||||| || ||||||||||    
T  15236499 cttccctttgtcagcaggagcactatagggcttaggacgac 15236539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 160
Target Start/End: Complemental strand, 11949217 - 11949107
Alignment:
Q  50 ttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacat 149  Q
    |||||||| || || |||||||| || ||||| ||||||  ||   ||||||||||||||||||| |||||||| ||||||||||| |||||||||||||    
T  11949217 ttgcagttatagcaaacaacatctccccgcttacaatcagctaatatgtgtcctttctgaccacatctgaagcacttcttctcatctttagtacaaacat 11949118  T
Q  150 tactcttgtgg 160  Q
    |||||||||||    
T  11949117 tactcttgtgg 11949107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 240
Target Start/End: Complemental strand, 2037194 - 2037014
Alignment:
Q  60 aacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtg 159  Q
    |||| |||| ||||||||||||||| |||  ||  || || |||||||  ||||| | |||||| |||||||| ||   | | |||||||||||||||||    
T  2037194 aacaaacaatatcaccacgcttgcattcagctattgtatgccctttcttcccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtg 2037095  T
Q  160 gcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 240  Q
    ||| ||||| || |||||||| ||||| |||||||||||| || ||||||| || || |||||||||||| ||| ||||||    
T  2037094 gcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcagtcaatctctg 2037014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 240
Target Start/End: Complemental strand, 2040935 - 2040755
Alignment:
Q  60 aacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtg 159  Q
    |||| |||| ||||||||||||||| |||  ||  || || |||||||  ||||| | |||||| |||||||| ||   | | |||||||||||||||||    
T  2040935 aacaaacaatatcaccacgcttgcattcagctattgtatgccctttcttcccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtg 2040836  T
Q  160 gcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 240  Q
    ||| ||||| || |||||||| ||||| |||||||||||| || ||||||| || || |||||||||||| ||| ||||||    
T  2040835 gcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcagtcaatctctg 2040755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 240
Target Start/End: Original strand, 14039593 - 14039773
Alignment:
Q  60 aacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtg 159  Q
    |||| |||| ||||||||||||||| |||  ||  || || |||||||  ||||| | |||||| |||||||| ||   | | |||||||||||||||||    
T  14039593 aacaaacaatatcaccacgcttgcattcagctattgtatgccctttcttcccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtg 14039692  T
Q  160 gcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 240  Q
    ||| ||||| || |||||||| ||||| |||||||||||| || ||||||| || || |||||||||||| ||| ||||||    
T  14039693 gcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcagtcaatctctg 14039773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 101 - 254
Target Start/End: Complemental strand, 13317810 - 13317657
Alignment:
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    ||||| |||||||| ||||| || ||||||||||| || || ||||||||||| |||||||||||  | || |||||||||||||| |  ||| ||||||    
T  13317810 cctttttgaccacatctgaaacacttcttctcatctttggtgcaaacattacttttgtggccttttgcaccacacttgtaacaaacaacatcaacaggag 13317711  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcag 254  Q
    || ||||||   | ||||||||||||||||| | | | || |||||||||||||    
T  13317710 catctctccccctaggcctcctctcatcatttaatatttgttttcctttgtcag 13317657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 168
Target Start/End: Original strand, 12501751 - 12501878
Alignment:
Q  41 ccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttag 140  Q
    |||||||| ||||| ||| |||| |||| ||||||| |||||||||||  ||  ||||| || ||||  ||||||| ||| ||||||||  | |||| ||    
T  12501751 ccctcttccttgcaattgaaacacacaatatcaccatgcttgcaatcagctaatgtgtgacccttcttgccacaccggaaacatttctttacctcctcag 12501850  T
Q  141 tacaaacattactcttgtggcctttctc 168  Q
     ||||||||| |||||||||||||||||    
T  12501851 gacaaacattgctcttgtggcctttctc 12501878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 186
Target Start/End: Complemental strand, 10417286 - 10417201
Alignment:
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaac 186  Q
    ||||||||||| || ||||| |||||||||||||| | ||| ||| |||||||||||||||| ||| | || || |||||||||||    
T  10417286 cctttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggcccttcacaccacatttgtaacaaac 10417201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 296
Target Start/End: Original strand, 11861165 - 11861426
Alignment:
Q  35 atatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcat 134  Q
    ||||| |||||||| ||| | ||| | || |||| ||||| | |||||||||||  ||  || || || |||| |||||||| ||| ||||||||| | |    
T  11861165 atatgaccctcttccttggaattgaagcacacaatatcactatgcttgcaatcagctaaagtatgacccttcttaccacaccagaaacatttcttcacct 11861264  T
Q  135 ccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcag 234  Q
    |||  | ||||||||| ||||||||||||||||| || || ||| || | || ||||| ||||||||| |  || | || |||| ||| |||||   ||     
T  11861265 cctctggacaaacattgctcttgtggcctttctcaccacaattgaaatagacaatctccgcaggagcatccttcttcttaggccgcctatcatcgaccat 11861364  T
Q  235 tctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttac 296  Q
    |||||| || ||||| |||| || ||||||||| || |||||  ||||||| || |||||||    
T  11861365 tctctgtttgcctttatcagcaggggcactatagggcttagggtgactctggtggcccttac 11861426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 10008619 - 10008671
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
    ||||| |||| || |||||| ||||| ||||||||||||||||||||||||||    
T  10008619 cctttatcagcaggggcactgtacggcttaggacgactctgctgtcccttacc 10008671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 10909229 - 10909281
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
    ||||| |||| || |||||| ||||| ||||||||||||||||||||||||||    
T  10909229 cctttatcagcaggggcactgtacggcttaggacgactctgctgtcccttacc 10909281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 294
Target Start/End: Complemental strand, 15713176 - 15713118
Alignment:
Q  236 ctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    |||||||| ||||| ||||  | |||||| ||||| |||||||||||||||||||||||    
T  15713176 ctctgcttccctttatcagcgggggcactgtacggcttaggacgactctgctgtccctt 15713118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 5422041 - 5421992
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  5422041 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 5421992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 6597074 - 6597123
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  6597074 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 6597123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 6603754 - 6603803
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  6603754 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 6603803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 12889728 - 12889777
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  12889728 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 12889777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 13255709 - 13255758
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  13255709 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 13255758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 16638792 - 16638841
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  16638792 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 16638841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 20059165 - 20059116
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||| |||| || |||||| ||||| |||||||||||||||||||||||    
T  20059165 cctttatcagcaggggcactgtacggcttaggacgactctgctgtccctt 20059116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 23415006 - 23414941
Alignment:
Q  137 ttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 202  Q
    |||| ||||||||||||||||||||||||||| ||  | ||| |||| || ||||| |||||||||    
T  23415006 ttaggacaaacattactcttgtggcctttctcgccatagttgaaacagacaatctccgcaggagca 23414941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 43165694 - 43165743
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  43165694 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 43165743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 48428466 - 48428515
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  48428466 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 48428515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 143 - 171
Target Start/End: Complemental strand, 13028555 - 13028527
Alignment:
Q  143 caaacattactcttgtggcctttctctcc 171  Q
    |||||||||||||||||||||||||||||    
T  13028555 caaacattactcttgtggcctttctctcc 13028527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 23079228 - 23079168
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 202  Q
    ||||||||| ||||||||||||||||| || || ||  ||||||| ||| |||||||||||    
T  23079228 acaaacattgctcttgtggcctttctcaccacaattaaaacaaacaatcacagcaggagca 23079168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 181; Significance: 8e-98; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 164517 - 164209
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||| | ||  | || |||||||||||||| ||||| |||||||| ||||| ||||||| ||||||||||||||||| ||  ||||||    
T  164517 tctaaccttcttcggctgagtataatgcgaactgatatggccttcttcattgcagttataacaaacaacattaccacgcttgcaatcaactaaagtgtgt 164418  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    |||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  164417 cctttctgaccacacctgaaacacttcttctcatccttagaacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaggag 164318  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    |  ||||||||||||||||||||||||||||||  ||||| ||||| ||||||| || |||||| || | ||||||||||||||||||||| ||||||||    
T  164317 cgtctctcctattgggcctcctctcatcattcaacctctgttttcccttgtcagcaggggcactgtatgatttaggacgactctgctgtcctttacctct 164218  T
Q  301 tcgctcact 309  Q
    ||| |||||    
T  164217 tcgttcact 164209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 179; Significance: 1e-96; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 2 - 300
Target Start/End: Original strand, 19438026 - 19438324
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||||||| |||| ||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||||||    
T  19438026 ctaaccttcttcggctgtgtgcactgcgaactgatatggcgctcttcgttgcagttataacatacaacatcaccacgcttgcaatcagctagagtgtgtc 19438125  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    ||||||||||||||||||| || || |||||||| ||||||||||||||||||  |||||||||||| || |||||||||| ||||||||||||||||||    
T  19438126 ctttctgaccacacctgaaacacttattctcatctttagtacaaacattactcaagtggcctttctcaccacacttgtaacgaacgatctcagcaggagc 19438225  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    | ||||||| |||||||||||||||||||| |  |||||||| || ||||||| ||  |||||||| || || ||||||||||||||||||||||||||    
T  19438226 atctctcctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagcactatatggcttcggacgactctgctgtcccttacctct 19438324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 14377174 - 14376881
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||| |||| || || |||||||| ||||||||||| |||||||| ||||| ||||||||||||||||| |||| |  ||  ||||||    
T  14377174 tctaaccttcttcggctgtgtacattgcgaactgatgtggccctcttcattgcagttataacaaacaacatcaccacgcttacaattagctaaagtgtgt 14377075  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| || |||||||| ||||| |  ||| ||||||    
T  14377074 cctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttgtggcctttctcaccgcacttgtagcaaacaacatcaacaggag 14376975  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    || ||||||||||||| ||||||||||||||||  ||||| ||||| ||||||| ||  ||||||||||| || ||||||||||||||||||||    
T  14376974 catctctcctattgggtctcctctcatcattcaacctctgttttcccttgtcagcaggagcactatacggcttcggacgactctgctgtccctt 14376881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 18797713 - 18798021
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||| ||  | || |||||||||||||||||||| || || |||||||| || || ||||| ||||||||||||||||||  ||| ||||||    
T  18797713 tctaaccttctttggttgagtgcactgtgaactgatatggccttcatcattgcagttatagcaaacaacgtcaccacgcttgcaatcagctagagtgtgt 18797812  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || ||||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||||||| || ||||| |||||||| || ||  ||||||    
T  18797813 cccttctgaccacacctgaaacatttctgctcatctttagtgcaaacattactcttgtggcctttctcgccacacttataacaaacaatatccacaggag 18797912  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || | ||||| |||||||||||||||||||||| ||| |||||||| ||||||| ||  ||||||||||| || |||||||||||||||||||| |||||    
T  18797913 catccctcctcttgggcctcctctcatcattcaatctttgctttcccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgcctct 18798012  T
Q  301 tcgctcact 309  Q
     || |||||    
T  18798013 gcggtcact 18798021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 23 - 309
Target Start/End: Complemental strand, 24515650 - 24515364
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||| |||||||| || || || || |||||||| ||||| |||||||| || | ||| ||||||  ||| ||||||| |||||||||||||||||| |    
T  24515650 cactgcgaactgatgtgaccttcctcattgcagttataacaaacaacatctcccctcttccaatcagctagtgtgtgtcttttctgaccacacctgaaac 24515551  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||||||||||| |||||||||||||||||||||||||||||||| || ||||| |||||||| || ||| |||||||| ||||||| |||||||||||    
T  24515550 acttcttctcatctttagtacaaacattactcttgtggcctttctcaccacacttataacaaacaatatcaacaggagcatctctcctcttgggcctcct 24515451  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    |||||||||||| ||||| ||||| ||||||| ||  |||||||| ||||||||||||||||| |||||||| ||||| || |||||    
T  24515450 ctcatcattcagcctctgttttcccttgtcagcaggagcactatatggtttaggacgactctgttgtcccttgcctctgcggtcact 24515364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 95 - 309
Target Start/End: Complemental strand, 21567155 - 21566941
Alignment:
Q  95 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| || |||||  | ||||| || ||||    
T  21567155 gtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcag 21567056  T
Q  195 caggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    |||||||| ||||||| |||||||| ||||||||||||||||  |||||||| ||||||| || |||||| ||||| |||||||||||||| ||||||||    
T  21567055 caggagcatctctcctcttgggccttctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttaggacgactctgttgtccctt 21566956  T
Q  295 acctcttcgctcact 309  Q
    ||  || ||||||||    
T  21566955 actcctccgctcact 21566941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 29 - 309
Target Start/End: Original strand, 19456074 - 19456354
Alignment:
Q  29 gaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttct 128  Q
    ||||| ||||| || || ||||||||||| || || ||||  || |||||||| ||||||  ||| ||||||||||||||||  ||||||||||| ||||    
T  19456074 gaactaatatgaccttcctcgttgcagttatagcaaacaatgtctccacgcttacaatcatctagtgtgtgtcctttctgacaccacctgaagcacttct 19456173  T
Q  129 tctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatc 228  Q
    |||||||  ||  ||| |||||||||||||||||||| || || |||||| | ||||| ||||||| ||||| | ||||||| |||||||||||||||||    
T  19456174 tctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatctcagtaggagtatctctcctcttgggcctcctctcatc 19456273  T
Q  229 attcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    |||||| || || ||||||||||||| ||  |||||||| ||||||||||||||||| |||||||||||||| || |||||    
T  19456274 attcagcctttgttttcctttgtcagcaggagcactatatggtttaggacgactctgttgtcccttacctctgcgttcact 19456354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 29 - 309
Target Start/End: Original strand, 19466219 - 19466499
Alignment:
Q  29 gaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttct 128  Q
    ||||| ||||| || || ||||||||||| || || ||||  || |||||||| ||||||  ||| ||||||||||||||||  ||||||||||| ||||    
T  19466219 gaactaatatgaccttcctcgttgcagttatagcaaacaatgtctccacgcttacaatcatctagtgtgtgtcctttctgacaccacctgaagcacttct 19466318  T
Q  129 tctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatc 228  Q
    |||||||  ||  ||| |||||||||||||||||||| || || |||||| | ||||| ||||||| ||||| | ||||||| |||||||||||||||||    
T  19466319 tctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatctcagtaggagtatctctcctcttgggcctcctctcatc 19466418  T
Q  229 attcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    |||||| || || ||||||||||||| ||  |||||||| ||||||||||||||||| |||||||||||||| || |||||    
T  19466419 attcagcctttgttttcctttgtcagcaggagcactatatggtttaggacgactctgttgtcccttacctctgcgttcact 19466499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 5 - 297
Target Start/End: Complemental strand, 10466102 - 10465810
Alignment:
Q  5 accttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctt 104  Q
    |||||||||||| | || ||||||||||| ||||| || ||||| |||||||| || || ||||  || |||||||| || |||  |||||||||||| |    
T  10466102 accttcttcggctgagtacactgtgaactaatatgaccttcttcattgcagttatagcagacaatgtccccacgcttacattcagctagggtgtgtccct 10466003  T
Q  105 tctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagc 204  Q
    ||||||||||||| || |||||| |||||||  ||  |||| |||| |||||||||||||| || || ||||||||||| || |||||||||||| || |    
T  10466002 tctgaccacacctaaaacatttcctctcatctctaccacaagcattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggaacatc 10465903  T
Q  205 tctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
    |||||| ||||||||||| |||||||||| | |||||||||| ||||||| |   ||| | || || ||||||||||||||||||||||||||    
T  10465902 tctcctcttgggcctcctatcatcattcattttctgctttcccttgtcagcaagagcattgtaaggcttaggacgactctgctgtcccttacc 10465810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 23 - 297
Target Start/End: Original strand, 24367445 - 24367719
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||| ||||| || ||| | ||||| |||||||| ||||  || || |||||||| |||  ||   |||| || |||||||||||||||||||    
T  24367445 cactgtgaactaatatgaccttctccattgcaattgtaacagacaatgtccccccgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 24367544  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||| || ||||| ||||||| |||||||||||    
T  24367545 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacatgagcatctctcctcttgggcctcct 24367644  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||  ||   |||||||||||||||||| ||  ||||| || || ||||||||| ||||||||||||||||    
T  24367645 atcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacc 24367719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 56 - 309
Target Start/End: Original strand, 25770922 - 25771175
Alignment:
Q  56 ttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactct 155  Q
    ||||| || |||| ||||||||||||||||||| |||  ||||||||||||   ||||| |  || || |||||||||||      ||| | |||| |||    
T  25770922 ttgtagcacacaatatcaccacgcttgcaatcagataatgtgtgtcctttcgtcccacatcgaaaacacttcttctcatcacggtcacataaattattct 25771021  T
Q  156 tgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagt 255  Q
    |||||||||| || || |||||| |||| || ||||||| ||||||| ||||||| || |||||||||||||||||||| ||||| || ||||||||||     
T  25771022 tgtggcctttttcaccacacttgaaacagacaatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagc 25771121  T
Q  256 agaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    ||  |||||||||||||  ||||||||||| |||||||||||||| ||||||||    
T  25771122 aggagcactatacggttacggacgactctgttgtcccttacctctgcgctcact 25771175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 294
Target Start/End: Complemental strand, 34642843 - 34642550
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||||||  | || ||||| ||||||||||| |||||  | ||||||||||| ||||||| ||||||||| || ||||||  ||    ||| |    
T  34642843 ctaaccttcttcggttgagtgcactgagaactgatatgaccctccccattgcagttgtagcatacaatatcaccacgtttacaatcagctaacacgtgac 34642744  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    | ||||| |||||||||||||| ||||||||||| || |||||||||||||| |||||||| ||||| || |||||  | ||||| ||||| |||||||     
T  34642743 ccttctgtccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcccttctcgccacacttaaagcaaactatctccgcaggagt 34642644  T
Q  202 agctc-tcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
      ||| |||  | ||| ||||| |||||||||||||  |||||||| ||  ||| ||  ||||||||||| |||||||||||||| ||||||||    
T  34642643 gtctcttcccttggggtctcctttcatcattcagtcgttgctttcccttaccagcaggagcactatacggcttaggacgactctgttgtccctt 34642550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 23 - 286
Target Start/End: Original strand, 21474645 - 21474908
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||| ||||| ||||| |||||||| |  || ||||| || |||| ||||||||||||||| |||   |  |||||||||||||  ||||| | ||| |    
T  21474645 cactgagaactaatatgaccctcttcatcacaattgtagcacacaatatcaccacgcttgcactcagccaatgtgtgtcctttcttcccacatcggaaac 21474744  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | |||||||||||      ||| |||||||||||||||||||| || || |||||| ||||||| ||||||| ||||||| |||||||  | ||||||||    
T  21474745 acttcttctcatcacggtcacatacattactcttgtggcctttttcaccacacttgaaacaaacaatctcagtaggagcatctctcctcctaggcctcct 21474844  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgc 286  Q
    ||||||||||||  ||||||| || ||||||| ||  ||||||||||| || ||||||||||||    
T  21474845 ctcatcattcagcatctgcttacccttgtcagcaggagcactatacggcttcggacgactctgc 21474908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 240
Target Start/End: Original strand, 16813722 - 16813902
Alignment:
Q  60 aacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtg 159  Q
    |||| |||| ||||||||||||||| |||  ||  ||||| | |||||  ||||| | |||||| |||||||| ||   | | |||||||||||||||||    
T  16813722 aacaaacaatatcaccacgcttgcattcagctattgtgtgccatttcttcccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtg 16813821  T
Q  160 gcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 240  Q
    ||||||||| || |||||||| ||||| |||||||||||| || ||||||| || || |||||||||||||||| ||||||    
T  16813822 gcctttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcattcaatctctg 16813902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 8720821 - 8720731
Alignment:
Q  143 caaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 233  Q
    |||||||||||||||||||||||||| || |||||||| ||||| |||||| ||||| || ||||||| || |||||||||||||||||||    
T  8720821 caaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcatcaggatcatctctcctcttaggcctcctctcatcattca 8720731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 101 - 254
Target Start/End: Complemental strand, 19486452 - 19486299
Alignment:
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    |||||||  ||||| | |||||| |||||||||||   | | |||||||||||||||||||| ||||| || |||||||| ||||| ||||||| ||||     
T  19486452 cctttcttcccacatcggaagcacttcttctcatcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaa 19486353  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcag 254  Q
    || |||| || || || |||||||||||||||| ||| ||||| ||||||||||    
T  19486352 catctcttctcttaggtctcctctcatcattcaatctttgcttccctttgtcag 19486299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 142 - 288
Target Start/End: Original strand, 23081587 - 23081733
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 241  Q
    |||| |||||||||||||||||||||| || ||  | |||||||| |||||| |||||||| || || |  | |||| |||||||||||| | ||| |||    
T  23081587 acaagcattactcttgtggcctttctcaccacaagtataacaaacaatctcaacaggagcatctttcttcctaggccgcctctcatcattaactctttgc 23081686  T
Q  242 tttcctttgtcagtagaggcactatacggtttaggacgactctgctg 288  Q
    |||||||| |||| ||  ||||| || || || ||||||||||||||    
T  23081687 tttcctttatcagcagcagcactgtaaggctttggacgactctgctg 23081733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 101 - 183
Target Start/End: Original strand, 15462459 - 15462541
Alignment:
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaaca 183  Q
    ||||||||||| || ||||| ||||||||||||||  | || || ||||||||||||||||||||| | || |||||||||||    
T  15462459 cctttctgaccgcatctgaaacatttcttctcatctctggtgcagacattactcttgtggcctttcgcaccacacttgtaaca 15462541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 233
Target Start/End: Complemental strand, 30678141 - 30678050
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 233  Q
    ||||||||||||||||||||  ||||| || |||||||| ||||| | ||||||||||| | || || |  | |||||||||||||||||||    
T  30678141 acaaacattactcttgtggctcttctcaccacacttgtagcaaacaacctcagcaggagtatctttctttctaggcctcctctcatcattca 30678050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 242
Target Start/End: Complemental strand, 25958864 - 25958770
Alignment:
Q  148 attactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgct 242  Q
    ||||||| ||||||||||||  || ||| |||| ||||| ||||||| ||||||| |||| || || || ||||||||||||| |||||| ||||    
T  25958864 attactcctgtggcctttcttaccacacctgtagcaaacaatctcagtaggagcatctctactcttaggtctcctctcatcatccagtctttgct 25958770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 29589456 - 29589407
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||| | |||||| ||||| |||||||||||||||||||||||    
T  29589456 cctttgtcagtgggggcactgtacggcttaggacgactctgctgtccctt 29589407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 28312894 - 28312946
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
    ||||||||||  | |||||| ||||| ||||||||||||||||||||||||||    
T  28312894 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttacc 28312946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 25115806 - 25115865
Alignment:
Q  235 tctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    |||||| || ||||| |||| || |||||| ||||| |||||||||||||||||||||||    
T  25115806 tctctgtttccctttatcagcaggggcactgtacggcttaggacgactctgctgtccctt 25115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 294
Target Start/End: Complemental strand, 5836254 - 5836196
Alignment:
Q  236 ctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||| || ||||| |||| || |||||||||||| |||||||||||||| ||||||||    
T  5836254 ctctgtttccctttatcagcaggggcactatacggcttaggacgactctgttgtccctt 5836196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 257
Target Start/End: Complemental strand, 20010657 - 20010503
Alignment:
Q  104 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaa-acgatctcagcaggagca 202  Q
    |||||||| || ||||| |||||||||||||| |  || ||| |||||||||||||||| ||| | || || ||||||||| || |  ||| ||||||||    
T  20010657 ttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcccttcacaccacatttgtaacaatacaacatcaacaggagca 20010558  T
Q  203 gctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtag 257  Q
      |||||  || |||  |||||||||||||| ||| || || ||||||| |||||    
T  20010557 tttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagtag 20010503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 16575154 - 16575203
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  16575154 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 16575203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 16620226 - 16620177
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  16620226 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 16620177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 297
Target Start/End: Original strand, 27205901 - 27205938
Alignment:
Q  260 gcactatacggtttaggacgactctgctgtcccttacc 297  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  27205901 gcactgtacggcttaggacgactctgctgtcccttacc 27205938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 297
Target Start/End: Complemental strand, 27243327 - 27243290
Alignment:
Q  260 gcactatacggtttaggacgactctgctgtcccttacc 297  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  27243327 gcactgtacggcttaggacgactctgctgtcccttacc 27243290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 199
Target Start/End: Complemental strand, 27559118 - 27559029
Alignment:
Q  110 ccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcagga 199  Q
    ||||||| ||| || |||||| | |||| || ||||||| ||||||||||||||||||| || || ||| |||||   ||||||||||||    
T  27559118 ccacaccggaaacacttcttcacctcctcaggacaaacagtactcttgtggcctttctcaccacaattgaaacaagtaatctcagcagga 27559029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 21764976 - 21765036
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 202  Q
    ||||||||| ||||||||||||||||| || || ||| |||| || ||||| |||||||||    
T  21764976 acaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagca 21765036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 28260214 - 28260162
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
    ||||||||||  | |||||| ||||| ||||||||||||||||| ||||||||    
T  28260214 cctttgtcagcgggggcactgtacggcttaggacgactctgctgccccttacc 28260162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 28285702 - 28285754
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
    ||||||||||  | |||||| ||||| ||||||||||||||||| ||||||||    
T  28285702 cctttgtcagcgggggcactgtacggcttaggacgactctgctgccccttacc 28285754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 28338963 - 28338911
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
    ||||||||||  | |||||| ||||| ||||||||||||||||| ||||||||    
T  28338963 cctttgtcagcgggggcactgtacggcttaggacgactctgctgccccttacc 28338911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 40246 - 40554
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||| |||| ||||| | ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||   ||   ||||     
T  40246 tctaaccttcttcggctgtgtgcactgagtactgatatggccctcttcgttgcagttataacatacaacatcacaacgcttgcaatccgctaacatgtga 40345  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || |||| ||||||||||||||| ||||| ||||| || ||||||||||||||||||||||||||||| || ||||| ||||| || |||||||||||||    
T  40346 cccttctaaccacacctgaagcacttcttatcatctttggtacaaacattactcttgtggcctttctcgccacacttataacagactatctcagcaggag 40445  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || |||||||||| ||||||||||||||||||||||| |||||||| ||||||| || |||||| |||||||||||||||||||| |||||| |||||||    
T  40446 catctctcctattcggcctcctctcatcattcagtctttgctttcccttgtcagcaggggcactgtacggtttaggacgactctgttgtcccatacctct 40545  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  40546 tcgctcact 40554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 173; Significance: 5e-93; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 263414 - 263722
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||| | |||| ||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||  |||||||||   ||    |||     
T  263414 tctaaccttcttcgactgtgtgcactgtgtactgatatggccctcttcgttacagttataacatacaacatcaccatccttgcaatccgctaaaaggtga 263513  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| || |||||  ||||||| |||||||||||||    
T  263514 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 263613  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || ||||||||  |||||||||||||||||||||||||||||| || ||||||| || |||||| ||||| ||| |||||||||||||||||||||||||    
T  263614 catctctcctaacgggcctcctctcatcattcagtctctgcttacccttgtcagcaggggcactgtacggcttaagacgactctgctgtcccttacctct 263713  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  263714 tcgctcact 263722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 173; Significance: 5e-93; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 203569 - 203877
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||| | |||| ||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||  |||||||||   ||    |||     
T  203569 tctaaccttcttcgactgtgtgcactgtgtactgatatggccctcttcgttacagttataacatacaacatcaccatccttgcaatccgctaaaaggtga 203668  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| || |||||  ||||||| |||||| ||||||    
T  203669 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcaccaggag 203768  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || ||||||||  |||||||||||||||||||||||||||||| || ||||||| || |||||| ||||| |||||||||||||||||||||||||||||    
T  203769 catctctcctaacgggcctcctctcatcattcagtctctgcttacccttgtcagcaggggcactgtacggcttaggacgactctgctgtcccttacctct 203868  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  203869 tcgctcact 203877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 173; Significance: 5e-93; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 22027836 - 22027528
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||||| ||| |||| || || ||||| || || | ||| ||||||  ||  |||||     
T  22027836 tctaaccttcttcggctgtgtgcactgagaactgatatggccctcttcattgtagttatagcaaacaacgtctcccctcttacaatcagctaatgtgtga 22027737  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || |||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||| || || |||||||||||||| |||||||||||||    
T  22027736 cccttctgaccacacctgaagcacttcttctcatctttggtacaaacattactcttgtggcctttatcgccacacttgtaacaaactatctcagcaggag 22027637  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || |||||||||||||||||||||||||||||| ||| |||||||| ||||||| || |||||| |||||||||||||||||||||||||||||||| ||    
T  22027636 catctctcctattgggcctcctctcatcattcaatctttgctttcccttgtcagcaggggcactgtacggtttaggacgactctgctgtcccttaccact 22027537  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  22027536 tcgctcact 22027528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 22054088 - 22054396
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||| ||||||||||| |||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   ||    |||     
T  22054088 tctatccttcttcggctgtgtgcactgtgtactgatatggccctcttcgttgcagttataacatacaacatcaccacgcttgcaatccgctaaaaggtga 22054187  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || ||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||| || |||||  ||||||| |||||||||| ||    
T  22054188 cccttctgaccacatctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcagaag 22054287  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || |||||||||| ||||||||||||||||| ||||||||||| || || |||| || |||||| ||||| ||||||||||||||| |||||||||||||    
T  22054288 catctctcctattcggcctcctctcatcattaagtctctgcttacccttatcagcaggggcactgtacggcttaggacgactctgccgtcccttacctct 22054387  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  22054388 tcgctcact 22054396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 31414088 - 31413780
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||| ||||||||| | | || ||||||||||||||||| || ||||||||||||||||| || ||||  || |||||||| || |||  ||| ||||||    
T  31414088 tctagccttcttcgactgagtacactgtgaactgatatgaccttcttcgttgcagttgtagcaaacaatgtccccacgcttacattcagctagtgtgtgt 31413989  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    ||||||||||||||||| || || ||| |||||||  ||  |||| |||| ||||| |||||||| || || |||||| ||||||| || ||| ||||||    
T  31413988 cctttctgaccacacctaaaacacttcctctcatctctaccacaagcattgctcttatggcctttttcaccacacttgaaacaaacaatttcaacaggag 31413889  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || ||||||| |||||||||||||||||||||| |||||||||||| ||||||| || ||| || || ||||||||||||||||||||||||||||| ||    
T  31413888 catctctcctcttgggcctcctctcatcattcattctctgctttcccttgtcagcaggggcgctgtaaggtttaggacgactctgctgtcccttacccct 31413789  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  31413788 tcgctcact 31413780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 23 - 297
Target Start/End: Complemental strand, 16268758 - 16268484
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||||||||| |||||| | ||||| ||||| || |||| ||| ||||||||||| |||  |||| | || || |||||||||||||||||||    
T  16268758 cactgtgaactgatatgaccctctccattgcaattgtagcagacaatatccccacgcttgcattcagctaggctatgacccttctgaccacacctgaagc 16268659  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| ||||||| |||  ||||||||||||||||||||||||||| || |||||||||||||| ||||||| ||||||| ||||| | || ||||||||    
T  16268658 acttcctctcatctttaccacaaacattactcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcttcttaggcctcct 16268559  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     |||||| |||   |||||||||||||||||| |   ||||| || || ||||||||| |||| |||||||||||    
T  16268558 gtcatcactcatcttctgctttcctttgtcagcaagagcactgtaaggcttaggacgattctgttgtcccttacc 16268484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 68 - 309
Target Start/End: Original strand, 21928720 - 21928961
Alignment:
Q  68 acatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagt-acaaacattactcttgtggcctttc 166  Q
    |||||||||||||||||||||   |  |||||||||||||| ||||| ||||| || ||||||||||| |  || ||  |||||||||| |||||| ||     
T  21928720 acatcaccacgcttgcaatcacccaaagtgtgtcctttctgtccacatctgaaacacttcttctcatc-tcggtcacttacattactctcgtggcccttt 21928818  T
Q  167 tctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactat 266  Q
    || || |||||| ||||||  ||||||| ||||||| |||||||  | |||||||||||||||||||| ||||| ||||||||||||| ||  |||||||    
T  21928819 tcgccacacttgaaacaaagaatctcagtaggagcatctctcctcctaggcctcctctcatcattcagcctctgttttcctttgtcagcaggagcactat 21928918  T
Q  267 acggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    ||||||||||||||||||| |||||||||||||| ||||||||    
T  21928919 acggtttaggacgactctgttgtcccttacctctacgctcact 21928961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 23 - 297
Target Start/End: Original strand, 28984158 - 28984432
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||||||||| || ||  | |||||||||||||| ||||  || ||||||||||| |||  ||   |||| || |||||||||||||||||||    
T  28984158 cactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 28984257  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||||||||| |||||| | |||||| ||||||| |||||||||||    
T  28984258 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtaacaaacaatctcaactggagcatctctcctcttgggcctcct 28984357  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||  ||  ||||||||||| ||||| | ||  ||||| || || ||||||||| |||| |||||||||||    
T  28984358 atcatcacccatcctctgctttcccttgtccgcaggagcactgtaaggcttaggacgattctgttgtcccttacc 28984432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 65 - 309
Target Start/End: Original strand, 22374158 - 22374402
Alignment:
Q  65 acaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctt 164  Q
    |||| |||||||||||||||||||  ||  |||||||||||||  |||||||| || || ||||| |||||      ||| ||||||||||||||| |||    
T  22374158 acaatatcaccacgcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttttcatcacggtcacatacattactcttgtggtctt 22374257  T
Q  165 tctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcact 264  Q
    | || || |||||| |||| || ||||||| ||||| | |||||||  | ||||||||||| ||||| ||||| || || |||||| ||| || ||||||    
T  22374258 tttcaccacacttgaaacagacaatctcagtaggagaatctctcctcctaggcctcctctcctcattaagtctttgtttacctttgacagcaggggcact 22374357  T
Q  265 atacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    ||||||||| |||||||||| ||||||||||||||| ||||||||    
T  22374358 atacggtttcggacgactctactgtcccttacctctgcgctcact 22374402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 23 - 309
Target Start/End: Original strand, 19985427 - 19985713
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    |||||||| || ||||| |||||||| |  || || || || |||||||| |||| ||||||||||  ||  ||||||| |||||| ||||| |||||      
T  19985427 cactgtgagctaatatgcccctcttcatcacaattatagcaaacaacatccccactcttgcaatcagctaatgtgtgtcatttctgtccacatctgaaat 19985526  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | |||||||||||      ||| |||||||||||||||| ||| || || |||||| ||||||| ||||||| ||||||| ||||||| || ||||||||    
T  19985527 acttcttctcatcacggtcacatacattactcttgtggcttttttcgccacacttgaaacaaacaatctcagtaggagcatctctcctcttaggcctcct 19985626  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    ||||||| |||  ||||| || || ||||| | || |||||||||||| || ||||||||||||| |||||| || || ||||||||    
T  19985627 ctcatcaatcatcctctgtttacccttgtccgcaggggcactatacggcttcggacgactctgctatcccttgccactgcgctcact 19985713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 297
Target Start/End: Complemental strand, 29300977 - 29300686
Alignment:
Q  6 ccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtccttt 105  Q
    ||||||||||| | || ||||| ||||||||||| || ||||| |||||||| ||  | ||||  || |||||||| || |||  ||| ||||||||| |    
T  29300977 ccttcttcggctgagtacactgagaactgatatgaccttcttcattgcagttatagtagacaatgtccccacgcttacattcagctagtgtgtgtcctct 29300878  T
Q  106 ctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagct 205  Q
    |||||||||||| || || ||| | |||||  ||  |||| |||| |||||||||||| | || || |||||  ||||||| || ||||| ||| || ||    
T  29300877 ctgaccacacctaaaacacttcctttcatctctaccacaagcattgctcttgtggcctctttcaccacacttaaaacaaacaatttcagcgggaacatct 29300778  T
Q  206 ctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
    | ||| ||||||||||| ||||||||||   ||||||| |||||||||| ||  ||||| || ||||||||||||||||  |||||||||||    
T  29300777 cccctcttgggcctcctatcatcattcatcttctgcttccctttgtcagcaggagcactgtaaggtttaggacgactctaatgtcccttacc 29300686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 2 - 253
Target Start/End: Complemental strand, 6607024 - 6606773
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||| ||| |||| ||||||||||||| ||| || ||||| |  || ||| | || |||| ||| ||||||||||| |||  ||  || || |    
T  6607024 ctaaccttcttaggctgtgtacactgtgaactgagatgtccttcttcatcacaattgaagcaaacaatatccccacgcttgcattcagctatcgtatgcc 6606925  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    | ||||  ||||| | |||||| |||||||| ||   | | |||||||||||||||||||| ||||| || |||||||| ||||| ||||||| |||| |    
T  6606924 ccttctttccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtaggaac 6606825  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtca 253  Q
    | |||| || || || |||||||||||||||| ||| |||| |||| |||||    
T  6606824 atctcttctcttaggtctcctctcatcattcaatctttgctctcctctgtca 6606773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 20391454 - 20391564
Alignment:
Q  144 aaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctt 243  Q
    ||||||||||||||||||| ||||| || |||||||| ||||| ||||||| |||| || |||| || || || |||||||||||||||| ||| || ||    
T  20391454 aaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagaaggaacatctctactcttaggtctcctctcatcattcaatctttgttt 20391553  T
Q  244 tcctttgtcag 254  Q
     ||||||||||    
T  20391554 ccctttgtcag 20391564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 294
Target Start/End: Complemental strand, 30310559 - 30310407
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 241  Q
    ||||||||||||||||||||||||||| || || ||| ||||||| || || ||||||||| |  || | || |||| ||| |||||   || ||||||     
T  30310559 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatatccgcaggagcatccttcttctttggccgcctatcatcgaccattctctgt 30310460  T
Q  242 tttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    || || || |||| || ||||||||| |||||||| ||||||||||| |||||    
T  30310459 ttgcccttatcagcaggggcactataaggtttagggcgactctgctgaccctt 30310407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 297
Target Start/End: Complemental strand, 19481373 - 19481335
Alignment:
Q  259 ggcactatacggtttaggacgactctgctgtcccttacc 297  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  19481373 ggcactgtacggcttaggacgactctgctgtcccttacc 19481335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 17671337 - 17671288
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  17671337 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 17671288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 19115866 - 19115915
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||| |||| || |||||| ||||| |||||||||||||||||||||||    
T  19115866 cctttatcagcaggggcactgtacggcttaggacgactctgctgtccctt 19115915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 20015578 - 20015529
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||| |||| || |||||| ||||| |||||||||||||||||||||||    
T  20015578 cctttatcagcaggggcactgtacggcttaggacgactctgctgtccctt 20015529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 307
Target Start/End: Original strand, 22523876 - 22524041
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 241  Q
    |||| |||||||| ||||||||||||| || ||  | || || || |||||| |||||||| || || |  | |||| |||||||||||| | ||| ||     
T  22523876 acaagcattactcctgtggcctttctcgccacaagtatagcacacaatctcaacaggagcatctttcttcctaggccgcctctcatcattaactctttgt 22523975  T
Q  242 tttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctca 307  Q
    ||||| || |||| || |||||| || || || |||||||||||||| || || ||| ||||||||    
T  22523976 tttcccttatcagcaggggcactgtaaggctttggacgactctgctgacctttgccttttcgctca 22524041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 171; Significance: 8e-92; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 14283474 - 14283180
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||| |||  |||||||  |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||  ||  |||||     
T  14283474 tctaaccttcttcggctgtgggcactgtgtgctgatatgaccctcttcgttgcagttataacatacaacatcaccacgcttgcaatcagctaatgtgtga 14283375  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||| | |||||||||||    
T  14283374 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttgtaacaaacaacctcagcaggag 14283275  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctta 295  Q
    || ||||||||  |||||||||||||||||| ||||||||||| || || |||| || |||||||||||| || || ||||||||||||||||||    
T  14283274 catctctcctaacgggcctcctctcatcattgagtctctgcttacccttatcagcaggggcactatacggcttcgggcgactctgctgtccctta 14283180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 61 - 309
Target Start/End: Original strand, 14144870 - 14145118
Alignment:
Q  61 acatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtgg 160  Q
    ||||||||||||||||||||||||||||  ||    ||| || || ||||||||||||||||| |||||||| ||||| |||||||| ||||||||||||    
T  14144870 acatacaacatcaccacgcttgcaatcagctaacacgtgacccttttgaccacacctgaagcacttcttctcctccttggtacaaacgttactcttgtgg 14144969  T
Q  161 cctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagagg 260  Q
    |||||||| ||  ||||  ||||||| ||||||||||||||| |||||||||  ||||||||||||||||| ||||||||||| || ||||||| || ||    
T  14144970 cctttctcgccatacttaaaacaaactatctcagcaggagcatctctcctatatggcctcctctcatcattaagtctctgcttacccttgtcagcagggg 14145069  T
Q  261 cactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  14145070 cactgtacggcttaggacgactctgctgtcccttacctcttcgctcact 14145118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 23 - 309
Target Start/End: Complemental strand, 16947550 - 16947264
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||||||||| |||||||||||||||||||| || ||||  || |||||||| || |||  ||| ||||||||||||||||||||||| |  |    
T  16947550 cactgtgaactgatatgaccctcttcgttgcagttgtagcaaacaatgtctccacgcttacattcagctagtgtgtgtcctttctgaccacacctaacac 16947451  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| |||||||  ||  |||| ||||||||||||||||||| || || |||||||||||||| || ||| | |||||| ||||||| |||||||| ||    
T  16947450 acttcctctcatctctaccacaagcattactcttgtggcctttttcaccacacttgtaacaaacaatttcaactggagcatctctcctcttgggccttct 16947351  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    ||||||||||| |||||||||||| ||||||| || |||||| || ||||||||||||||||||||||||||||| |||| ||||||    
T  16947350 ctcatcattcattctctgctttcccttgtcagcaggggcactgtatggtttaggacgactctgctgtcccttaccccttctctcact 16947264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 13676600 - 13676899
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||  |||  ||||||||||||||||||||||| || |||||||| || || || |  || || ||||| ||||||  ||  ||||||    
T  13676600 tctaaccttcttcggttgtgcacactgtgaactgatatggccctcctcattgcagttatagcaaactatgtctccccgcttacaatcagctaatgtgtgt 13676699  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || ||||| |||||||||||| | ||||||||||| |||  ||||||||||||||||||||||||||  || |||||||| ||||| |||||| ||||||    
T  13676700 cccttctgtccacacctgaagtacttcttctcatctttatcacaaacattactcttgtggcctttcttaccacacttgtagcaaacaatctcaacaggag 13676799  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || ||||||| ||||||||||||||||||||||  ||||| ||||||||||||| ||  |||||||||||||||||| ||||||||||||  ||||||||    
T  13676800 catctctcctcttgggcctcctctcatcattcaacctctgttttcctttgtcagcaggagcactatacggtttaggatgactctgctgtcatttacctct 13676899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 23 - 309
Target Start/End: Complemental strand, 11385507 - 11385221
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    |||||||||||||| |||||||| || |  || || ||||| ||||||||||| | |||||| | |   |  ||||||||||||||||||||||||||||    
T  11385507 cactgtgaactgatgtggccctcctcatcacaattataacaaacaacatcacccctcttgcagttagccaatgtgtgtcctttctgaccacacctgaagc 11385408  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||||||||||| || |||||||||||||| |||||||||||||| || ||||| || ||||| ||||||||||||||| ||||||| |||||||| ||    
T  11385407 acttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttatagcaaactatctcagcaggagcatctctcctcttgggccttct 11385308  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    ||||||||||||||  |||||||| ||||||| || |||||| ||||| |||||| ||||||| ||||||||||| || ||||||||    
T  11385307 ctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttaggatgactctgttgtcccttacccctccgctcact 11385221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 18051053 - 18050745
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||| |||| ||||| | |||||| || |||||||| || || || ||||||||||||||||| |||||||||||   |||  ||||     
T  18051053 tctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattataacatacaacatcaccgcgcttgcaatcggctagcatgtga 18050954  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || ||||| ||||| ||||| || |||||||||||||| |||||||| ||||||||||| |||||||| || |||||  | || || |||||||||||||    
T  18050953 cccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggag 18050854  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || | ||| || | ||||||||||||||||| ||||||||||| || || ||||| |  ||||||||||||||||||||| |||| ||||||||||||||    
T  18050853 catccctcttactcggcctcctctcatcattaagtctctgcttacccttatcagtcggagcactatacggtttaggacgattctgatgtcccttacctct 18050754  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  18050753 tcgctcact 18050745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 6 - 309
Target Start/End: Complemental strand, 12798596 - 12798296
Alignment:
Q  6 ccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtccttt 105  Q
    ||||||| ||| |||| ||||| ||||||||||| || ||||| || |||||||| || |||||||| |||||||  ||||||  ||  |||||||||||    
T  12798596 ccttcttaggctgtgtacactgcgaactgatatgaccttcttcattacagttgtagcaaacaacatccccacgctcacaatcagctaaagtgtgtccttt 12798497  T
Q  106 ctgaccacacctgaagcatttcttctcatccttagt-acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagc 204  Q
    |||||||||||||||||| ||||||||||| |  || ||||||||||||||||||||||||   ||| |||||| ||||||| || |||| | ||||| |    
T  12798496 ctgaccacacctgaagcacttcttctcatc-tcggtcacaaacattactcttgtggccttt---tccacacttgaaacaaacaatatcagtatgagcatc 12798401  T
Q  205 tctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgc 304  Q
    |||||| ||| |||||||||||||||||| ||||||||| || ||||||| ||  ||||||||||| || |||||||||||||||||||| ||||| |||    
T  12798400 tctcctcttgagcctcctctcatcattcaatctctgcttacccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgcctctgcgc 12798301  T
Q  305 tcact 309  Q
    |||||    
T  12798300 tcact 12798296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 2 - 309
Target Start/End: Complemental strand, 15099702 - 15099395
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||||||| | || ||||| ||||||||||| || || || |||||||| ||||| || |  || |||||||| ||||||  ||| |||||||    
T  15099702 ctaaccttcttcggctgcgtacactgcgaactgatatgaccttcctcattgcagttataacaaacgatgtccccacgcttacaatcatctagagtgtgtc 15099603  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    | |||||||||||||||||||| |||||||||||  ||  |||||| |||||||||||||||||||| || |||||| | ||||| || |||| ||||||    
T  15099602 ccttctgaccacacctgaagcacttcttctcatctctatcacaaacgttactcttgtggcctttctcaccacacttgaagcaaactatgtcagtaggagc 15099503  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
    | ||||||| |||||||||||| ||||||| |  |||||||| || ||||||| ||  |||||||||||  | |||||||||||||||||||| |||||     
T  15099502 atctctcctcttgggcctcctcccatcatttaacctctgcttacccttgtcagcaggagcactatacggcgtcggacgactctgctgtcccttgcctcta 15099403  T
Q  302 cgctcact 309  Q
    ||||||||    
T  15099402 cgctcact 15099395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 6 - 297
Target Start/End: Original strand, 13024498 - 13024789
Alignment:
Q  6 ccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtccttt 105  Q
    ||||||||||| | || ||||| ||||||||||| || ||||||||||||||||| || ||||  || |||||||| || |||  |||||||||||||||    
T  13024498 ccttcttcggctgagtacactgagaactgatatgaccttcttcgttgcagttgtagcagacaatgtctccacgcttacattcagctagggtgtgtccttt 13024597  T
Q  106 ctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagct 205  Q
    || |||||||||||| |||||| ||||||   ||  | || |||| || ||||||||||| || || |||||||||||||| || |||||||||||| ||    
T  13024598 ctaaccacacctgaaacatttcctctcatatctaccataagcattgcttttgtggcctttttcaccacacttgtaacaaacaatttcagcaggagcatct 13024697  T
Q  206 ctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
    ||||| ||||||||||| ||||||||||  |||||||| |||||||||| ||  ||||| || |||||||||||| ||| ||||||||||||    
T  13024698 ctcctcttgggcctcctatcatcattcatcctctgcttccctttgtcagcaggagcactgtaaggtttaggacgattctactgtcccttacc 13024789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 5 - 297
Target Start/End: Original strand, 12459781 - 12460073
Alignment:
Q  5 accttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctt 104  Q
    |||||||||||| | || ||||||||||| ||||| || ||||| |||||||| || || ||||  || |||||||| || |||  |||||||||||| |    
T  12459781 accttcttcggctgagtacactgtgaactaatatgaccttcttcattgcagttatagcagacaatgtccccacgcttacattcagctagggtgtgtccct 12459880  T
Q  105 tctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagc 204  Q
    ||||||||||||| || |||||| |||||||  ||  |||| |||| |||||||||||||| || || ||||||||||| || |||||||||||| || |    
T  12459881 tctgaccacacctaaaacatttcctctcatctctaccacaagcattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggaacatc 12459980  T
Q  205 tctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
    |||||| ||||||||||| |||||||||| | |||||||||| ||||||| |   ||| | || || ||||||||||||||||||||||||||    
T  12459981 tctcctcttgggcctcctatcatcattcattttctgctttcccttgtcagcaagagcattgtaaggcttaggacgactctgctgtcccttacc 12460073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 23 - 309
Target Start/End: Original strand, 19150182 - 19150468
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||| ||||| ||||| || ||||| || |||||||| || |||| ||| |||||||||||||||   |  ||||||||||||||||||||||| ||||    
T  19150182 cactgcgaactaatatgtccttcttcattacagttgtagcaaacaatatctccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagc 19150281  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||||||| |||   |  ||| |||||||| |||||||||||||| || |||||| | ||||| || |||| ||||||| ||||||| || ||||||||    
T  19150282 acttcttctgatctcgatcacacacattactgttgtggcctttctcaccacacttgaagcaaacaatatcagtaggagcatctctcctcttaggcctcct 19150381  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    |||||||||||  |||||||| || ||||||| || ||||||| |||| || |||||||||||||||||||||||| | ||||||||    
T  19150382 ctcatcattcaacctctgcttacccttgtcagcaggggcactaaacggcttcggacgactctgctgtcccttacctatgcgctcact 19150468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 23 - 309
Target Start/End: Original strand, 20749581 - 20749867
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||| ||||| ||||| || ||||| || |||||||| || |||| ||| |||||||||||||||   |  ||||||||||||||||||||||| ||||    
T  20749581 cactgcgaactaatatgtccttcttcattacagttgtagcaaacaatatctccacgcttgcaatcagccaatgtgtgtcctttctgaccacacctaaagc 20749680  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||||||| |||   |  ||| |||||||| |||||||||||||| || |||||| | ||||| || |||| ||||||| ||||||| || ||||||||    
T  20749681 acttcttctgatctcgatcacacacattactgttgtggcctttctcaccacacttgaagcaaacaatatcagtaggagcatctctcctcttaggcctcct 20749780  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    |||||||||||  |||||||| || ||||||| || ||||||| |||| || |||||||||||||||||||||||| | ||||||||    
T  20749781 ctcatcattcaacctctgcttacccttgtcagcaggggcactaaacggcttcggacgactctgctgtcccttacctatgcgctcact 20749867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 23 - 297
Target Start/End: Complemental strand, 13965746 - 13965472
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||||||||| |||||| | ||||| ||||| || |||| ||| ||||||||||| |||  |||  |||| || |||||||||||||||||||    
T  13965746 cactgtgaactgatatgaccctctccattgcaattgtagcagacaatatccccacgcttgcattcagctagactgtgacccttctgaccacacctgaagc 13965647  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    ||||  | ||||| |||  ||||||||||||||||||| ||||||| || |||||||| ||| | ||||||||||||||| ||||||| |||||||||||    
T  13965646 attttctatcatctttaccacaaacattactcttgtggtctttctcaccacacttgtagcaatcaatctcagcaggagcatctctcctcttgggcctcct 13965547  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||  ||   |||||||||||||||||| ||  ||||| || || ||||||||| | || |||||||||||    
T  13965546 atcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattatgttgtcccttacc 13965472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 297
Target Start/End: Complemental strand, 26091876 - 26091602
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||||||||| || ||  | |||||||||||||| ||||  || ||||||||||| |||  ||   |||| || |||||||||||||||||||    
T  26091876 cactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 26091777  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||| |||||||| ||||||| |||||||||||    
T  26091776 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 26091677  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||  ||   |||||||||||||||||| ||  ||||| || || ||||||||| ||||||||||||||||    
T  26091676 atcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacc 26091602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 23 - 297
Target Start/End: Complemental strand, 40924895 - 40924621
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||||||||| || ||  | |||||||||||||| ||||  || ||||||||||| |||  ||   |||| || |||||||||||||||||||    
T  40924895 cactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 40924796  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||| |||||||| ||||||| |||||||||||    
T  40924795 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 40924696  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||  ||   |||||||||||||||||| ||  ||||| || || ||||||||| |||| |||||||||||    
T  40924695 atcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgttgtcccttacc 40924621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 24 - 309
Target Start/End: Complemental strand, 14261323 - 14261038
Alignment:
Q  24 actgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagca 123  Q
    |||| ||||| ||||| || || || || |||||||| || |||| ||| |||||||||||||||   |  |||||||||||||||| |||||| ||| |    
T  14261323 actgcgaactaatatgtccttcctcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtcctttctgactacacctaaagta 14261224  T
Q  124 tttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctc 223  Q
     |||||||||||   |  ||  ||||||||||||||||||||||| || |||||| | ||||  ||||||| |||||||  |||||  || |||||||||    
T  14261223 cttcttctcatctcgatgacgcacattactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggagcatatctccccttaggcctcctc 14261124  T
Q  224 tcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    |||||||||||||||| ||| || ||||||| || |||||||||||| || |||||||||| ||||||||||||| | ||||||||    
T  14261123 tcatcattcagtctctacttacccttgtcagcaggggcactatacggcttcggacgactctactgtcccttacctttgcgctcact 14261038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 23 - 297
Target Start/End: Complemental strand, 26115668 - 26115394
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||| ||| ||||| || ||| | ||||| |||||||| ||||  || ||||||||||| |||  ||   |||| || |||||||||||||||||||    
T  26115668 cactgtgtactaatatgaccttctccattgcaattgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 26115569  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||||||||| |||||||| |||||| ||||||| |||||||||||    
T  26115568 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtaacaaacaatctcagccggagcatctctcctcttgggcctcct 26115469  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     |||||| |||   |||||||||||||||||| ||  ||||| || || ||||||||| |||| | |||||||||    
T  26115468 atcatcactcatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgttatcccttacc 26115394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 23 - 297
Target Start/End: Original strand, 49155472 - 49155746
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||||||||| || ||  | |||||||||||||| ||||  || ||||||||||| |||  ||   | || || |||||||||||||||||||    
T  49155472 cactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactatgacccttctgaccacacctgaagc 49155571  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||| |||||||| ||||||| |||||||||||    
T  49155572 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 49155671  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     || |||  ||  ||||||||||||||||||| ||  ||||| || || ||||||||| |||| |||||||||||    
T  49155672 atcctcacccatcctctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgttgtcccttacc 49155746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 21755561 - 21755857
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    ||||||||||||||||   |  |||||||| || ||||| |||||| | ||||||||||| || |||| ||| |||||||| || |||  ||  |||||     
T  21755561 tctaaccttcttcggctcaggacactgtgagctaatatgaccctctccattgcagttgtagcagacaatatccccacgcttacattcagctaaagtgtga 21755660  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || ||||||||||||||||| || ||| ||||||| |||  ||||||||| |||||||||||||| || || |||||||||||||| |||||||  ||||    
T  21755661 cccttctgaccacacctgaaacacttcctctcatctttaccacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagagggag 21755760  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
    || ||||||| || |||||| | |||||| |||   |||||||||||||||||| ||  ||||| || || ||||||||| | || |||||||||||    
T  21755761 catctctcctcttaggcctcatgtcatcactcatattctgctttcctttgtcagcaggagcactgtaaggcttaggacgattttgttgtcccttacc 21755857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 294
Target Start/End: Complemental strand, 12712762 - 12712470
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    |||||||||||| |  | || ||||| ||| ||||||| |||||  | |||||||| || ||||||| ||||||||| |||||||||  ||    ||| |    
T  12712762 ctaaccttcttccgttgagtgcactgagaattgatatgaccctccccattgcagttatagcatacaatatcaccacgtttgcaatcagctaacacgtgac 12712663  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    | ||||| |||||||||||||| ||||||||||| || |||||||||||||| |||||||||||||| || |||||  | ||||| |||||| ||||||     
T  12712662 ccttctgtccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcaacaggagt 12712563  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
      |||| |  ||||| || ||||||||||||||||  |||||||| ||  ||| ||  ||||| ||||| |||||||||||||| ||||||||    
T  12712562 gtctcttcccttgggtcttctctcatcattcagtcgttgctttcccttaccagcaggagcactgtacggcttaggacgactctgttgtccctt 12712470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 141 - 281
Target Start/End: Complemental strand, 12203760 - 12203620
Alignment:
Q  141 tacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 240  Q
    |||||||||||||||||||||| ||||| || |||||||| ||||| ||| |||||||| || ||||||| || || |||||||||||||||| ||| ||    
T  12203760 tacaaacattactcttgtggcccttctcaccacacttgtagcaaacaatcacagcaggaacatctctcctcttaggtctcctctcatcattcaatctttg 12203661  T
Q  241 ctttcctttgtcagtagaggcactatacggtttaggacgac 281  Q
     || |||||||||| ||  ||||| || || ||||||||||    
T  12203660 tttccctttgtcagcaggagcactgtagggcttaggacgac 12203620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 14140828 - 14140915
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatca 88  Q
    |||||||||||||||| |||| ||||| | |||||| |||||||||||||| || || ||||||||||||||||||||||||||||||    
T  14140828 tctaaccttcttcggctgtgtgcactgagtactgatgtggccctcttcgttacaattataacatacaacatcaccacgcttgcaatca 14140915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 142 - 294
Target Start/End: Complemental strand, 17703436 - 17703284
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 241  Q
    ||||||||||||||||||||||||| | || || ||| ||||||| || || ||||||||| |  || | || |||| ||| |||||   || ||||||     
T  17703436 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatccttcttctttggccgcctatcatcgaccattctctgt 17703337  T
Q  242 tttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    || || || ||||||| ||||||||| |||||||| ||||||||||| |||||    
T  17703336 ttgcccttatcagtaggggcactataaggtttagggcgactctgctggccctt 17703284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 294
Target Start/End: Complemental strand, 44788240 - 44788183
Alignment:
Q  237 tctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    |||| |||||||| ||||||| |||||| ||||| |||||||||||||||||||||||    
T  44788240 tctgttttcctttatcagtaggggcactgtacggcttaggacgactctgctgtccctt 44788183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 294
Target Start/End: Original strand, 9591653 - 9591805
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 241  Q
    ||||||||| ||||||||||||||||| || || ||| |||| || ||||| ||||||||| |  || | || |||| ||| ||||||  || |||||||    
T  9591653 acaaacattgctcttgtggcctttctcgccacagttgaaacagacaatctctgcaggagcatccttcttcttaggccgcctatcatcaaccattctctgc 9591752  T
Q  242 tttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    || || || |||  || ||||||||| || ||||| ||||||||||| |||||    
T  9591753 ttgcccttatcaacaggggcactataaggcttagggcgactctgctggccctt 9591805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 294
Target Start/End: Original strand, 13004795 - 13004907
Alignment:
Q  182 caaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgac 281  Q
    ||||| |||||||||||||   |||| |  ||||| || ||||||||||||||||  |||||||| ||| ||| || ||| || ||||| ||||||||||    
T  13004795 caaactatctcagcaggagtgtctcttcccttgggtcttctctcatcattcagtcgttgctttcccttgccagcaggggcgctgtacggcttaggacgac 13004894  T
Q  282 tctgctgtccctt 294  Q
    |||| ||||||||    
T  13004895 tctgttgtccctt 13004907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 294
Target Start/End: Complemental strand, 16726422 - 16726270
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 241  Q
    ||||||||||||||||||||||||| | || || ||| ||||||| || || ||||||||| |  || | || |||| ||| |||||   || ||||||     
T  16726422 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatccttcttctttggccgcctatcatcgaccattctctgt 16726323  T
Q  242 tttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    || || || ||||||| |||||| || |||||||| ||||||||||| |||||    
T  16726322 ttgcccttatcagtaggggcactttaaggtttagggcgactctgctggccctt 16726270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 294
Target Start/End: Original strand, 12690881 - 12690939
Alignment:
Q  236 ctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||| || ||||| |||| || |||||| ||||| |||||||||||||||||||||||    
T  12690881 ctctgtttccctttatcagcaggggcactgtacggcttaggacgactctgctgtccctt 12690939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 8710994 - 8711043
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  8710994 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 8711043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 13689430 - 13689479
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||| ||||||| |||||| ||||| |||||||||||||| ||||||||    
T  13689430 cctttatcagtaggggcactgtacggcttaggacgactctggtgtccctt 13689479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 15157938 - 15157889
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||| |||| || |||||| ||||| |||||||||||||||||||||||    
T  15157938 cctttatcagcaggggcactgtacggcttaggacgactctgctgtccctt 15157889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 9903 - 9595
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||   ||    |||     
T  9903 tctaaccttcttcggcagtgtgcactgtgtactgatatggcactcttcgttgcagttataacatacaacatcaccacgcttgcaatccgctaaaaggtga 9804  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || |||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| || |||||  ||||||| |||||||||||||    
T  9803 cccttctaaccacacctgaagcacttcttctcatccttggtacaaacattactcttgtggcctttctcgccacacttaaaacaaactatctcagcaggag 9704  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || ||||||||  |||||||||||||||||| |||||| |||| || || |||| || |||||| ||||| |||||||||||||| ||||||||||||||    
T  9703 catctctcctaacgggcctcctctcatcattaagtctcagcttacccttatcagcaggggcactgtacggcttaggacgactctgttgtcccttacctct 9604  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  9603 tcgctcact 9595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 23 - 291
Target Start/End: Original strand, 15282 - 15550
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||  ||| ||||||| ||||||||||||||||||||    
T  15282 cactgtgaactgatatggccctcttcattgcagttataacaaacaacatcaccacgcttgcaatcagctagagtgtgtcatttctgaccacacctgaagc 15381  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | |||||||| ||||||||||||||||||||||||||||||||||| || ||||| || || |  ||||||||||||||| |||||||||||||||||||    
T  15382 acttcttctcgtccttagtacaaacattactcttgtggcctttctcgccacacttatagcagaaaatctcagcaggagcatctctcctattgggcctcct 15481  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcc 291  Q
    ||||||||| |  ||||||||||  ||||||| ||  ||||||||||| || ||||||||||| |||||    
T  15482 ctcatcatttaacctctgctttcgcttgtcagcaggagcactatacggcttcggacgactctgttgtcc 15550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 54 - 291
Target Start/End: Original strand, 7279 - 7516
Alignment:
Q  54 agttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattact 153  Q
    |||| ||||| ||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  7279 agttataacaaacaacatcaccacgcttgcaatcagctagagtgtgtcctttctgaccacacctgaagcacttcttctcatctttagtacaaacattact 7378  T
Q  154 cttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtca 253  Q
    ||||||||||||||| || |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||  |||||||| || ||||||    
T  7379 cttgtggcctttctcgccacacttgtaacaaacaatctcagcaggagcatctctcctattgggcctcctctcatcattcaacctctgcttacccttgtca 7478  T
Q  254 gtagaggcactatacggtttaggacgactctgctgtcc 291  Q
      ||  ||||||||||| || |||||||||||||||||    
T  7479 acaggagcactatacggcttcggacgactctgctgtcc 7516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 2 - 291
Target Start/End: Original strand, 8803 - 9092
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||||||  | || ||||| |||||||||||||| ||||||||||||||||| || ||||  ||||||||||||||||||  ||| |||||||    
T  8803 ctaaccttcttcggttgagtgcactgcgaactgatatggccttcttcgttgcagttgtagcaaacaatgtcaccacgcttgcaatcagctagagtgtgtc 8902  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||| ||||| || ||||| |||||||| |||||| |||||||    
T  8903 ctttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggccattctcgccacacttataacaaacaatctcatcaggagc 9002  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcc 291  Q
    | ||||||| ||||| || ||||||||||||||  ||||||| |||||||||| ||  ||||||||||| || |||||||||||||||||    
T  9003 atctctcctcttgggtcttctctcatcattcagcttctgcttccctttgtcagcaggagcactatacggcttcggacgactctgctgtcc 9092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 2 - 291
Target Start/End: Original strand, 54236 - 54525
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    |||||||| |||||  |||| ||| |||| |||||||| |||||||| |||||||| ||||| |||||||||||||||||||||| |  ||| |||||||    
T  54236 ctaacctttttcggttgtgtgcaccgtgagctgatatgaccctcttcattgcagttataacaaacaacatcaccacgcttgcaataagctagagtgtgtc 54335  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    | ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||    
T  54336 ccttctgaccacacctgaaacacttcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttgtaacaaacgatctcagcaagagc 54435  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcc 291  Q
    |  ||  |||||||||||||||||||||||||  |||||||| |||||||||| ||  ||||||||||| || ||||||||||| |||||    
T  54436 atttcatctattgggcctcctctcatcattcaacctctgcttccctttgtcagcaggagcactatacggctttggacgactctgatgtcc 54525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 152; Significance: 2e-80; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 2 - 309
Target Start/End: Complemental strand, 39448 - 39141
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    |||||||||||||   |||| ||||| ||||||||| | || || || |||||||| || || |||||||| || ||||| |||| |  ||  |||||||    
T  39448 ctaaccttcttcgattgtgtacactgcgaactgatacgaccttcctcattgcagttatagcaaacaacatctccccgcttacaattagctaatgtgtgtc 39349  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    |||||||||||||||||||||| ||||||||||| |||  ||||||||||||||||||||||||||| || |||||||| ||||| ||||||||||||||    
T  39348 ctttctgaccacacctgaagcacttcttctcatctttatcacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcagcaggagc 39249  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
    | ||||||| ||||||||||||||||||||||| ||||||||||| ||||||| ||  |||||||| ||||||||| |||||||||||||||||||||||    
T  39248 atctctcctcttgggcctcctctcatcattcagcctctgctttcccttgtcagcaggagcactatatggtttaggaagactctgctgtcccttacctctt 39149  T
Q  302 cgctcact 309  Q
    || |||||    
T  39148 cgttcact 39141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 104 - 202
Target Start/End: Complemental strand, 180852 - 180754
Alignment:
Q  104 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 202  Q
    |||||||| || ||||| |||||||||||||| | ||| ||| |||||||||||||||| ||| | || || ||||||||||| | |||| ||||||||    
T  180852 ttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggcccttcacaccacatttgtaacaaacaacctcaacaggagca 180754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 14753 - 14813
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 202  Q
    ||||||||||||||||||||| ||||| || |||||| ||||||| ||||| |||||||||    
T  14753 acaaacattactcttgtggccattctcgccacacttgaaacaaacaatctccgcaggagca 14813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 150; Significance: 3e-79; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 8578 - 8285
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||  |  | ||||| |||||||||||||||| ||| |||||||| ||||| ||||| ||||||||||||||||||  ||| ||||||    
T  8578 tctaaccttcttcggttgattgcactgcgaactgatatggccctattcattgcagttataacaaacaacgtcaccacgcttgcaatcagctagagtgtgt 8479  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| || ||||| |||||||| || ||| || |||    
T  8478 cccttctgaccacacctgaaacacttcttctcatccttagtacaaacattactcttgtggccattctcgccacacttataacaaacaatatcaacatgag 8379  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    || ||||||| ||||| ||||||||||||||||| ||||||||||| ||||||| ||  ||||||||||| || ||||||||||| ||||||||    
T  8378 catctctcctcttgggtctcctctcatcattcagcctctgctttcccttgtcagcaggagcactatacggcttcggacgactctgttgtccctt 8285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 18792 - 18499
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||  |  | ||||| |||||||||||||||| ||| |||||||| ||||| ||||| ||||||||||||||||||  ||| ||||||    
T  18792 tctaaccttcttcggttgattgcactgcgaactgatatggccctattcattgcagttataacaaacaacgtcaccacgcttgcaatcagctagagtgtgt 18693  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| || ||||| |||||||| || ||| || |||    
T  18692 cccttctgaccacacctgaaacacttcttctcatccttagtacaaacattactcttgtggccattctcgccacacttataacaaacaatatcaacatgag 18593  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    || ||||||| ||||| ||||||||||||||||| ||||||||||| ||||||| ||  ||||||||||| || ||||||||||| ||||||||    
T  18592 catctctcctcttgggtctcctctcatcattcagcctctgctttcccttgtcagcaggagcactatacggcttcggacgactctgttgtccctt 18499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 147; Significance: 2e-77; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 35 - 309
Target Start/End: Original strand, 16150829 - 16151103
Alignment:
Q  35 atatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcat 134  Q
    ||||| |||||||| |  ||||| || || ||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||| ||||||||||    
T  16150829 atatgcccctcttcatcacagttatagcaaacaacatcaccacgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcat 16150928  T
Q  135 ccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcag 234  Q
    | |||||||||||||||||||||||||||||||| || ||||| || ||||| || ||| |||||||| ||||||| ||||||||||||||||||||||     
T  16150929 ctttagtacaaacattactcttgtggcctttctcgccacacttatagcaaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattcaa 16151028  T
Q  235 tctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
      |||||||||||||||||||||  ||||||||||| || ||||||||||||||||| || || ||||| |||||    
T  16151029 cttctgctttcctttgtcagtaggagcactatacggcttcggacgactctgctgtcctttgccccttcgatcact 16151103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 35 - 309
Target Start/End: Original strand, 16154975 - 16155249
Alignment:
Q  35 atatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcat 134  Q
    ||||| |||||||| |  ||||| || || ||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||| ||||||||||    
T  16154975 atatgcccctcttcatcacagttatagcaaacaacatcaccacgcttgcaatcagctagtgtgtgtcctttctgaccacacctgaagcacttcttctcat 16155074  T
Q  135 ccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcag 234  Q
    | |||||||||||||||||||||||||||||||| || ||||| || ||||| || ||| |||||||| ||||||| ||||||||||||||||||||||     
T  16155075 ctttagtacaaacattactcttgtggcctttctcgccacacttatagcaaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattcaa 16155174  T
Q  235 tctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
      |||||||||||||||||||||  ||||||||||| || ||||||||||||||||| || || ||||| |||||    
T  16155175 cttctgctttcctttgtcagtaggagcactatacggcttcggacgactctgctgtcctttgccccttcgatcact 16155249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 53750583 - 53750275
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||| |||| ||||| | |||||| ||||||||||| || || || || |||||||||||||| |||||||||||   |||  ||||     
T  53750583 tctaaccttcttcggctgtgtgcactgagtactgatgtggccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtga 53750484  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || ||||| ||||| ||||| || |||||||||||||| |||||||| ||||||||||| |||||||| || |||||  | || || |||||||||||||    
T  53750483 cccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggag 53750384  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || | ||| || | ||||||||||||||||| ||||||||||| || || ||||| | |||||||||||||||||||||| |||| ||||||||||||||    
T  53750383 catccctcttactcggcctcctctcatcattaagtctctgcttacccttatcagtcggggcactatacggtttaggacgattctgatgtcccttacctct 53750284  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  53750283 tcgctcact 53750275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 51603905 - 51603597
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||| |||| ||||| | |||||| ||||||||||| || || || || || ||||||||||| |||||||||||   |||  ||||     
T  51603905 tctaaccttcttcggctgtgtgcactgagtactgatgtggccctcttcattacaattatagcacacaacatcaccgcgcttgcaatcggctagcatgtga 51603806  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || ||||| ||||| ||||| || |||||||||||||| |||||||| ||||||||||| |||||||| || |||||  | || || |||||||||||||    
T  51603805 cccttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcacactatctcagcaggag 51603706  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || | ||| || | ||||||||||||||||| ||||||||||| || || ||||| | |||||||||||||||||||||| |||| ||||||||||||||    
T  51603705 catccctcttactcggcctcctctcatcattaagtctctgcttacccttatcagtcggggcactatacggtttaggacgattctgatgtcccttacctct 51603606  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  51603605 tcgctcact 51603597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 309
Target Start/End: Complemental strand, 14993479 - 14993172
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||| ||  | || ||||| ||||||||||| || || || ||||||||||| || |||||||| ||| |||||||||||  ||  |||||||    
T  14993479 ctaaccttcttaggttgcgtacactgcgaactgatatgaccttcctcattgcagttgtagcaaacaacatccccatgcttgcaatcagctaaagtgtgtc 14993380  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    |||||||||||||||||||||| |||||||  ||      |||||||||||||||||||||||| || || |||||| ||||||| || |||| ||||||    
T  14993379 ctttctgaccacacctgaagcacttcttcttctcacggtcacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagc 14993280  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
    | ||||||| |||||||||||||||||||||| ||||||||| || ||||||| || |||||||||||| ||  |||||||||| |||||||| |||||     
T  14993279 atctctcctcttgggcctcctctcatcattcaatctctgcttacccttgtcagcaggggcactatacggcttcagacgactctgttgtcccttgcctcta 14993180  T
Q  302 cgctcact 309  Q
    ||||||||    
T  14993179 cgctcact 14993172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 294
Target Start/End: Original strand, 20893190 - 20893483
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    ||||||||||||||||   || ||||| ||||||||||| |||||||| |||||||||||  | |||| ||| ||||||||||| |||  ||   |||||    
T  20893190 tctaaccttcttcggctcagtacactgcgaactgatatgcccctcttcattgcagttgtagtagacaatatccccacgcttgcattcagctaaattgtgt 20893289  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || |||||||||||||||||||| ||| |||||||  ||  ||||||||| ||||||| |||||| || || |||||||||||||| ||||||| |||||    
T  20893290 cccttctgaccacacctgaagcacttcctctcatctctaccacaaacattgctcttgttgcctttttcaccacacttgtaacaaacaatctcagaaggag 20893389  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    || ||||||| || |||||||| ||||||||||   |||||||||||||||||| ||  ||||| || || |||||||||||||||||||||||    
T  20893390 catctctcctcttaggcctcctatcatcattcatcttctgctttcctttgtcagcaggagcactttaaggcttaggacgactctgctgtccctt 20893483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 23 - 297
Target Start/End: Complemental strand, 11204323 - 11204049
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||||||||| |||||| | ||||| ||||| || |||| ||| ||||||||||| | |  |||  |||| || |||||||||||||||||||    
T  11204323 cactgtgaactgatatgaccctctccattgcaattgtagcagacaatatccccacgcttgcattaagctagactgtgacccttctgaccacacctgaagc 11204224  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    ||||  | |||||  ||  ||||||||| ||||||||||||||||| || ||||| |||||||| ||||||| ||||||| ||||||| ||||| |||||    
T  11204223 attttctatcatctctaccacaaacattgctcttgtggcctttctcaccacacttataacaaacaatctcagaaggagcatctctcctcttgggtctcct 11204124  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||||||   ||| |||||||||||||| ||  |||||||| || ||||||||| ||||||||||||||||    
T  11204123 atcatcattcatcttctactttcctttgtcagcaggagcactataaggcttaggacgattctgctgtcccttacc 11204049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 309
Target Start/End: Original strand, 15266936 - 15267243
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||||||| | || ||||  ||||||||||| || |||||||||||||| || || ||||  || ||| |||| ||||||  ||| |||||||    
T  15266936 ctaaccttcttcggctgcgtacactacgaactgatatgaccttcttcgttgcagttatagcaaacaatgtctccatgcttacaatcagctagagtgtgtc 15267035  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    |||||||||||||||||||||| |||||||||||  |   ||||||||||||||| ||||| |||||  | |||||| | ||||| || |  | ||||||    
T  15267036 ctttctgaccacacctgaagcacttcttctcatctctgtcacaaacattactcttatggcccttctcatcacacttgaagcaaacaatattcgtaggagc 15267135  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
    | ||||||| |||||||||||||||||||| |  |||||||| || ||||||| ||  ||||||||||| || ||||||||||| |||||||| |||||     
T  15267136 atctctcctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagcactatacggcttcggacgactctgttgtcccttgcctctg 15267235  T
Q  302 cgctcact 309  Q
    || |||||    
T  15267236 cgttcact 15267243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 30 - 309
Target Start/End: Original strand, 18259629 - 18259908
Alignment:
Q  30 aactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttctt 129  Q
    |||||||||| || || || |||||||| || || ||||  || |||||||| ||||||  ||| ||||||||||||||||||||||||||||| |||||    
T  18259629 aactgatatgaccttcctcattgcagttatagcaaacaatgtccccacgcttacaatcagctagagtgtgtcctttctgaccacacctgaagcacttctt 18259728  T
Q  130 ctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatca 229  Q
    ||||||  ||  |||||||||||||||||||||||| || || |||||  | ||||| || | || ||||||| || |||| ||||||||||||||||||    
T  18259729 ctcatctctatcacaaacattactcttgtggcctttttcaccacacttaaagcaaacaatattagtaggagcatctgtcctcttgggcctcctctcatca 18259828  T
Q  230 ttcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    || |  |||||||| || ||||||| ||  ||||||||||| || ||| |||||||||||||||| || || ||||||||    
T  18259829 tttaacctctgcttacccttgtcagcaggagcactatacggcttcggatgactctgctgtcccttgcccctacgctcact 18259908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 297
Target Start/End: Complemental strand, 3261885 - 3261611
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||||||||| || ||  | |||||||||||||| ||||  || ||||||||||| |||  ||   |||| || |||||||||||||||||||    
T  3261885 cactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 3261786  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||| |||||||| ||||||| |||||||||||    
T  3261785 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 3261686  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||  ||   |||||||||||||||||| ||  ||||| || || ||||||||| ||||||||||||||||    
T  3261685 atcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacc 3261611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 297
Target Start/End: Original strand, 7357448 - 7357722
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||| ||||| |||||| | ||||||||||| || ||||  || ||||||||||| |||  ||   |||| || |||||||||||||||||||    
T  7357448 cactgtgaactaatatgaccctctccattgcagttgtagcagacaatgtctccacgcttgcattcagctaaattgtgacccttctgaccacacctgaagc 7357547  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| ||||||| |||  | ||||||| ||||||||||||||||| || | |||||||||||| ||||||||||||||| ||||||| |||||||||||    
T  7357548 acttcctctcatctttaccataaacattgctcttgtggcctttctcaccactcttgtaacaaacaatctcagcaggagcatctctcctcttgggcctcct 7357647  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||  ||   |||||||||||||||||| ||  ||| | || || ||||||||| |||| |||||||||||    
T  7357648 atcatcacccatcttctgctttcctttgtcagcaggagcaatgtaaggcttaggacgattctgttgtcccttacc 7357722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 65 - 309
Target Start/End: Original strand, 15073582 - 15073826
Alignment:
Q  65 acaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctt 164  Q
    |||||||||| | |||||||||||  ||  |||||||||||||  |||||||| || || |||||||||||      ||| |||||||||||||||||||    
T  15073582 acaacatcacaaagcttgcaatcagctaatgtgtgtcctttctttccacacctaaaacacttcttctcatcacggtcacatacattactcttgtggcctt 15073681  T
Q  165 tctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcact 264  Q
    | || || |||||| |||| || ||||||| ||||||| |||||||  | |||||||||||||||||||||||||| ||  ||||||||| ||  |||||    
T  15073682 tttcaccacacttgaaacagacaatctcagtaggagcatctctcctcctaggcctcctctcatcattcagtctctgtttaactttgtcagcaggagcact 15073781  T
Q  265 atacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    ||||||||| ||||||||| |||||||||||||||| ||||||||    
T  15073782 atacggtttcggacgactcagctgtcccttacctctacgctcact 15073826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 23 - 297
Target Start/End: Complemental strand, 29450628 - 29450354
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    |||||||||||||| || || ||  | |||||||||||||| ||||  || ||||||||||| |||  ||   |||| || ||||||||||||||||| |    
T  29450628 cactgtgaactgatgtgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaaac 29450529  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| | |||||      ||||||||||||||||||||||||||| || |||||||| ||||| |||||| |||||||| ||||||| || ||||||||    
T  29450528 acttcctatcatctcctccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttaggcctcct 29450429  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||  ||   |||||||||||||||||| ||  ||||| || |||||||||||| |||| |||||||||||    
T  29450428 atcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggtttaggacgattctgttgtcccttacc 29450354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 23 - 297
Target Start/End: Complemental strand, 44658957 - 44658683
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||| ||||| |  ||| | ||||| |||||||| |||| ||| ||||||||||| |||  ||   |||| || |||||||||||||||||||    
T  44658957 cactgtgaactaatatgacattctccattgcaattgtaacagacaatatccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 44658858  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||| |||||||| ||||||| |||||||||||    
T  44658857 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 44658758  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     |||| |  ||   |||||||||||||||| | ||  ||||| || || ||||||||| |||| |||||||||||    
T  44658757 atcatgacccatcttctgctttcctttgtccgcaggagcactgtaaggcttaggacgattctgttgtcccttacc 44658683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 101 - 254
Target Start/End: Original strand, 27903644 - 27903797
Alignment:
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    |||||||||||||| ||||| || ||||||||||| || || || ||||||||||||||||||||| | || |||||||||||||| |  ||| ||||||    
T  27903644 cctttctgaccacatctgaaacacttcttctcatctttggtgcagacattactcttgtggcctttcgcaccacacttgtaacaaacaacatcaacaggag 27903743  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcag 254  Q
    || ||||||   | |||| |||||||||||||| ||| || |||||||||||||    
T  27903744 catctctccccctaggccgcctctcatcattcaatctttgttttcctttgtcag 27903797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 143 - 267
Target Start/End: Original strand, 8708978 - 8709102
Alignment:
Q  143 caaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgct 242  Q
    |||||||||||||||||||| ||||| || |||||||| ||||| |||||||||||| || || | || || || |||||||||||||||| ||| ||||    
T  8708978 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggaacatctattctcttaggtctcctctcatcattcaatctttgct 8709077  T
Q  243 ttcctttgtcagtagaggcactata 267  Q
    | |||||||||| ||  ||||||||    
T  8709078 tccctttgtcagcaggagcactata 8709102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 253
Target Start/End: Original strand, 13879290 - 13879520
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||||| ||| || |||||||  || ||| | || |||| || |||||||||||| |||  ||  || || || ||||  ||||| | |||||    
T  13879290 cactgtgaactgagatgaccttcttcgtcacaattgaagcaaacaatatgaccacgcttgcattcagctatcgtatggcccttctttccacatcggaagc 13879389  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | |||||||| || | | | || ||||||||||||||||| ||||| || |||||||||||||| ||||||| || | || |||| || || || |||||    
T  13879390 acttcttctcctcatcattgcatacattactcttgtggcccttctcaccacacttgtaacaaacaatctcagtagaaacatctcttctcttaggtctcct 13879489  T
Q  223 ctcatcattcagtctctgctttcctttgtca 253  Q
    ||||||||||| ||| ||||  |||||||||    
T  13879490 ctcatcattcaatctttgctaccctttgtca 13879520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 294
Target Start/End: Original strand, 13513650 - 13513802
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 241  Q
    ||||||||| ||||||||||||||||| || || ||| |||| || ||||| ||||||||| |  || | || |||| ||| ||||||  || |||||||    
T  13513650 acaaacattgctcttgtggcctttctcgccacagttgaaacagacaatctctgcaggagcatccttcttcttaggccgcctatcatcaaccattctctgc 13513749  T
Q  242 tttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    || || || |||  || ||||||||| || ||||| ||||||||||| |||||    
T  13513750 ttgcccttatcaacaggggcactataaggcttagggcgactctgctggccctt 13513802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 294
Target Start/End: Original strand, 14697401 - 14697553
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 241  Q
    |||| |||||||||| ||||||||||| || ||  | || ||||| |||||||||| |||| || || |  | ||||||||||||||||||| ||| |||    
T  14697401 acaagcattactcttatggcctttctcaccacaagtatagcaaacaatctcagcagtagcatctttctttctaggcctcctctcatcattcaatctttgc 14697500  T
Q  242 tttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    || || || |||| ||  ||||| || || || |||||||| ||||| |||||    
T  14697501 ttacccttatcagcaggagcactgtaaggctttggacgactttgctgaccctt 14697553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 18224185 - 18224125
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 202  Q
    ||||||||||| ||||||||||||||| || || ||| ||||||| ||||| |||||||||    
T  18224185 acaaacattacacttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagca 18224125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 8050235 - 8050186
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||| |||| || |||||| ||||| |||||||||||||||||||||||    
T  8050235 cctttatcagcaggggcactgtacggcttaggacgactctgctgtccctt 8050186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 12480000 - 12480049
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  12480000 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 12480049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 14300591 - 14300542
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||| |||| || |||||| ||||| |||||||||||||||||||||||    
T  14300591 cctttatcagcaggggcactgtacggcttaggacgactctgctgtccctt 14300542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 16233604 - 16233555
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  16233604 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 16233555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 17091761 - 17091712
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  17091761 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 17091712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 19775405 - 19775356
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  19775405 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 19775356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 23959147 - 23959196
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  23959147 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 23959196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 27714736 - 27714785
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  27714736 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 27714785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 144; Significance: 1e-75; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 2 - 309
Target Start/End: Complemental strand, 9887 - 9580
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||||||  | || || |||||||| ||||||||||| || |||||||| || || |||||||| || ||||| ||||||| |||||||||||    
T  9887 ctaaccttcttcggttgcgtacattgtgaacttatatggccctcctcattgcagttatagcaaacaacatctccccgcttacaatcaactagggtgtgtc 9788  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    |||||||||||||||||||||| |||||||||||||||  ||| ||||||||||||||||| ||||| || |||||||| ||||| || |||||||||||    
T  9787 ctttctgaccacacctgaagcacttcttctcatccttatcacagacattactcttgtggcccttctcaccacacttgtagcaaacaatatcagcaggagc 9688  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
    | ||||||| || |||||||||||||||||||  || |||||||| || |||| |   |||||||| ||||||||| ||||||||||||| |||||||||    
T  9687 atctctcctgtttggcctcctctcatcattcatcctttgctttcccttatcagcaagagcactatatggtttaggatgactctgctgtcctttacctctt 9588  T
Q  302 cgctcact 309  Q
    || |||||    
T  9587 cgttcact 9580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 141; Significance: 6e-74; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 24096800 - 24096492
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||| ||||||||||| | || ||||||||||||||||| || ||||||||||||||||| || ||||  || |||||||| || |||  ||| ||||||    
T  24096800 tctagccttcttcggctgagtacactgtgaactgatatgaccttcttcgttgcagttgtagcaaacaatgtccccacgcttacattcagctagtgtgtgt 24096701  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    ||||||||||||||||| || || ||| |||||||  ||  |||| ||||||||||||||||||| || || |||||| ||||||| |||||| ||||||    
T  24096700 cctttctgaccacacctaaaacacttcctctcatctctaccacaagcattactcttgtggcctttttcaccacacttgaaacaaacaatctcaacaggag 24096601  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || ||||||| ||||||||||||||||||||||  ||||| ||||||||||||| ||  |||||||| ||||||||||||||||| |||||||||| |||    
T  24096600 catctctcctcttgggcctcctctcatcattcatcctctgttttcctttgtcagcaggagcactataaggtttaggacgactctgttgtcccttacttct 24096501  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  24096500 tcgctcact 24096492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 2 - 309
Target Start/End: Complemental strand, 20833084 - 20832778
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||| ||||  | || ||||| |||||||| || || || || |||||||| ||||| |||||||| || | ||||||||||  ||| |||||||    
T  20833084 ctaaccttcctcggttgcgtacactgcgaactgatgtgaccttcctcattgcagttataacaaacaacatctcccctcttgcaatcagctagtgtgtgtc 20832985  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||| || |||||||| ||||| || ||| |||||||    
T  20832984 ctttctgaccacacctgaaacaattcttctcatctttagtacaaacattactcttgtggcctttctcgccacacttgtagcaaacaatatcaacaggagc 20832885  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
    | ||||||| ||||| ||||||||||||||||| ||||||||||| ||||||| ||  ||||||||  ||||||||||||||||||||||||| |||||     
T  20832884 atctctcctcttgggtctcctctcatcattcagcctctgctttcccttgtcagcaggagcactata-tgtttaggacgactctgctgtcccttgcctcta 20832786  T
Q  302 cgctcact 309  Q
    || |||||    
T  20832785 cggtcact 20832778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 2 - 309
Target Start/End: Complemental strand, 21742736 - 21742429
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||| ||| | || ||||| ||||| ||||| || || || || |||||||| || |||||||| |||||||||||||||   |  |||||||    
T  21742736 ctaaccttcttaggctgcgtacactgcgaactaatatgtccttcctcattacagttgtagcaaacaacatccccacgcttgcaatcagccaatgtgtgtc 21742637  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagt-acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    |||||||||||||||| ||||| ||||||||||| |  || ||| ||||||||||||||||||||||| || |||||| | ||||  ||||||| |||||    
T  21742636 ctttctgaccacacctaaagcacttcttctcatc-tcggtcacatacattactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggag 21742538  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || ||||||| || ||||||||||||||||||||||||||||| || ||||||||||  |||||||||||||| |||||||||| |||||||||||||||    
T  21742537 catctctcctcttaggcctcctctcatcattcagtctctgcttacccttgtcagtaggagcactatacggtttcggacgactctactgtcccttacctct 21742438  T
Q  301 tcgctcact 309  Q
     ||||||||    
T  21742437 gcgctcact 21742429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 21961232 - 21961540
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    ||||||||||||||||   |  ||||| ||||||||||| |||||| | ||||||||||| || |||| ||| |||||||| || |||  ||   |||||    
T  21961232 tctaaccttcttcggctcagggcactgcgaactgatatgaccctctccattgcagttgtagcagacaatatccccacgcttacattcagctaaactgtgt 21961331  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || |||||||||||||||||||| ||| ||||||| |||  ||||||||| |||||||||||||| || || |||||||||||||| ||||||| |||||    
T  21961332 cccttctgaccacacctgaagcacttcctctcatctttaccacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggag 21961431  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || ||||||| ||||| ||||| ||||||||||   |||||||||||||||||| ||  ||||| || || ||||||||| |||||||||||||||||||    
T  21961432 catctctcctcttgggtctcctatcatcattcatcttctgctttcctttgtcagaaggagcactgtaaggcttaggacgattctgctgtcccttacctct 21961531  T
Q  301 tcgctcact 309  Q
     | ||||||    
T  21961532 cctctcact 21961540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 2 - 309
Target Start/End: Complemental strand, 21739220 - 21738913
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||| |||   || ||||| ||||||||||| || ||||| ||  ||||||| || | |||||| |||||||| ||||||| || ||||||||    
T  21739220 ctaaccttcttaggctccgtacactgcgaactgatatgaccttcttcattatagttgtagcaaaaaacatccccacgcttacaatcaactaaggtgtgtc 21739121  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    |||||||||||||||| ||||| |||||||||||   |  ||||||||||||||||||||||||||| || |||||| | ||||  ||||||| ||||||    
T  21739120 ctttctgaccacacctaaagcacttcttctcatctcgatcacaaacattactcttgtggcctttctcaccacacttgaagcaaataatctcagtaggagc 21739021  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
    | ||||||| || ||||||||||||||||||| ||||||||| || ||||||| |  ||| ||||| || || ||||||||||| ||||||||||||||     
T  21739020 acctctcctcttaggcctcctctcatcattcaatctctgcttacccttgtcagcatgggcgctatatggcttcggacgactctgttgtcccttacctctg 21738921  T
Q  302 cgctcact 309  Q
    || |||||    
T  21738920 cggtcact 21738913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 3 - 309
Target Start/End: Original strand, 19857481 - 19857787
Alignment:
Q  3 taaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcc 102  Q
    |||||||||||||  | || ||||| ||||| ||||| || || || ||| |||| ||||| ||||  || || ||||| ||||||  ||| ||||||||    
T  19857481 taaccttcttcggttgagtacactgcgaactaatatgaccttcctcattgtagttataacaaacaatgtctccccgcttacaatcagctagtgtgtgtcc 19857580  T
Q  103 tttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 202  Q
    |||||||||||||||||||||||||||||||||  ||  ||| |||||||||||||||||||| || || |||||| | ||||| ||||| | || ||||    
T  19857581 tttctgaccacacctgaagcatttcttctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatctcggtagaagca 19857680  T
Q  203 gctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttc 302  Q
     ||||||| || |||||||||||||||||||  |||||||| || ||||||| ||  |||||||| ||||||||||||||||| |||||||||||||| |    
T  19857681 tctctcctcttaggcctcctctcatcattcaacctctgcttacccttgtcagcaggagcactatatggtttaggacgactctgttgtcccttacctctgc 19857780  T
Q  303 gctcact 309  Q
    | |||||    
T  19857781 gttcact 19857787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 2 - 309
Target Start/End: Complemental strand, 22015929 - 22015622
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||||||| | || |||||  |||| |||||  | || ||||||||||| ||||| |||||||| |||||||||||||||  ||  |||||||    
T  22015929 ctaaccttcttcggctgcgtacactgcaaactaatatgatcttcctcgttgcagttataacaaacaacatccccacgcttgcaatcagctaaagtgtgtc 22015830  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    |||||||||||||||||||||| |||||||||||  ||  |||||||||||| || |||||||| ||||| |||||| | ||||| || |  | ||||||    
T  22015829 ctttctgaccacacctgaagcacttcttctcatctctatcacaaacattacttttttggcctttttctccacacttgaatcaaacaatatttgtaggagc 22015730  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
    | ||||| | || ||||||||||||||||| | ||||| ||| || ||||||| ||  ||||||||||| || |||||||||||||||||||| || ||     
T  22015729 atctctcttctttggcctcctctcatcatttattctcttcttacccttgtcagcaggagcactatacggcttcggacgactctgctgtccctttccccta 22015630  T
Q  302 cgctcact 309  Q
    ||||||||    
T  22015629 cgctcact 22015622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 23 - 297
Target Start/End: Complemental strand, 31537160 - 31536886
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||| |||||||| ||  | |||||||||||||| ||||  || ||||||||||| |||  ||   |||| || |||||||||||||||||||    
T  31537160 cactgtgaactaatatggccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 31537061  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    ||||  | |||||  ||  ||||||||| ||||||||||||||||| || ||||| |||||||| ||||||| ||||||| ||||||| ||||| |||||    
T  31537060 attttctatcatctctaccacaaacattgctcttgtggcctttctcaccacacttataacaaacaatctcagaaggagcatctctcctcttgggtctcct 31536961  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||||||  ||||||||||||||||||| ||  |||||||| || ||||||||| ||||||||||||||||    
T  31536960 atcatcattcatcctctgctttcctttgtcagcaggagcactataaggcttaggacgattctgctgtcccttacc 31536886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 20074894 - 20074598
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    ||||||||||||||||   |  ||||| ||| ||||||| |||||| | ||||||||||| || |||| ||| ||||||||||| |||   | | ||||     
T  20074894 tctaaccttcttcggctcaggacactgcgaattgatatgaccctctccattgcagttgtagcagacaatatccccacgcttgcattcagccaagctgtga 20074795  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || |||||||||||||||||||| ||| ||||||| ||| |||||||||| ||||||||||||||||| || ||||||||||| || |||||||  ||||    
T  20074794 cccttctgaccacacctgaagcacttcctctcatctttactacaaacattgctcttgtggcctttctcaccacacttgtaacacacaatctcagtgggag 20074695  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
    || ||||||| ||  ||||||| |||||| |||   |||||||||||||||||| ||| ||||| || || ||||||||| ||||||||||||||||    
T  20074694 catctctcctcttaagcctcctgtcatcactcatcttctgctttcctttgtcagcagaagcactgtaaggcttaggacgattctgctgtcccttacc 20074598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 23 - 297
Target Start/End: Original strand, 20297610 - 20297884
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    |||| |||||| ||||| || ||| | ||||||||||| || ||||  || ||||||||||| |||  |||| |||| || |||| ||||||||||||||    
T  20297610 cactatgaactaatatgaccttctccattgcagttgtagcagacaatgtccccacgcttgcattcagctaggctgtgacccttctaaccacacctgaagc 20297709  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| ||||||| |||  |||||||||||||||||||| |||||| || |||||||||||||| ||||||||||||||| ||||||| |||||||||||    
T  20297710 acttcctctcatctttaccacaaacattactcttgtggcatttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcctcct 20297809  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||  ||   |||| ||||| ||||||||||  ||||| || || ||||||||| |||| |||||||||||    
T  20297810 gtcatcacccatcttctgttttcccttgtcagtaggagcactgtaaggcttaggacgattctgatgtcccttacc 20297884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 23 - 297
Target Start/End: Complemental strand, 38909989 - 38909715
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||||||||| || ||  | |||||||||||||| ||||  || ||||||||||| |||  ||   |||| || |||||||||||||||||||    
T  38909989 cactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 38909890  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||| |||||||| ||||||| |||||||||||    
T  38909889 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 38909790  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||  ||  ||||||||||||||||||| ||  ||||| || |||||||||||| |||| |||||||||||    
T  38909789 atcatcacccatcctctgctttcctttgtcagcaggagcactgtaaggtttaggacgattctgttgtcccttacc 38909715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 26 - 297
Target Start/End: Original strand, 52988971 - 52989242
Alignment:
Q  26 tgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatt 125  Q
    |||||||||||||| |||||| | ||||||||||| || ||||  || |||||||| || |||  ||   |||| || ||||||||||||||||| || |    
T  52988971 tgtgaactgatatgaccctctccattgcagttgtagcagacaatgtccccacgcttacattcagctaaattgtgacccttctgaccacacctgaaacact 52989070  T
Q  126 tcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctc 225  Q
    || ||||||| |||  ||||||||| |||||||||||||| || || |||||||||||||| ||||||| ||||||| ||||||| || |||||||| ||    
T  52989071 tcctctcatctttaccacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatc 52989170  T
Q  226 atcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
    ||||||||   |||||||||||||||||| ||  ||||| || || ||||||||| | ||||||||||||||    
T  52989171 atcattcatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattttgctgtcccttacc 52989242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 23 - 297
Target Start/End: Original strand, 48426100 - 48426374
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||||||||| || ||  | |||||||||||||| ||||  || ||||||||||| |||  ||   |||| || |||||||||||||||||||    
T  48426100 cactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 48426199  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||| |||||||| ||||||| |||||||||||    
T  48426200 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 48426299  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||  ||   |||||||||||||||||| ||  ||||| || || ||||||||| |||| |||||||||||    
T  48426300 atcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgttgtcccttacc 48426374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 23 - 297
Target Start/End: Original strand, 37680276 - 37680550
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||| ||||| || ||| | ||||| |||||||| ||||  || ||||||||||| |||  ||   |||| || |||||||||||||||||||    
T  37680276 cactgtgaactaatatgaccttctccattgcaattgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 37680375  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||| |||||| | ||||||| |||||||||||    
T  37680376 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagtatctctcctcttgggcctcct 37680475  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||  ||   |||||||||||||||||||||  ||||| || || ||||||||| |||| |||||||||||    
T  37680476 atcatcacccatcttctgctttcctttgtcagtaggagcactgtaaggcttaggacgattctgttgtcccttacc 37680550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 253
Target Start/End: Original strand, 18273114 - 18273224
Alignment:
Q  143 caaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgct 242  Q
    |||||||||||||||||||| ||||| || |||||||||||||| ||||||| |||| || |||| || || || |||||||||||||||| ||| ||||    
T  18273114 caaacattactcttgtggcccttctcaccacacttgtaacaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgct 18273213  T
Q  243 ttcctttgtca 253  Q
      |||||||||    
T  18273214 cccctttgtca 18273224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 142 - 295
Target Start/End: Complemental strand, 21228600 - 21228447
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 241  Q
    ||||||||||||||||||||||||||| || || ||| ||||||| ||||| ||||||||| |  || | || |||| ||| |||||   || ||||||     
T  21228600 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagcatccttcttcttaggccgcctatcatcgaccattctctgt 21228501  T
Q  242 tttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctta 295  Q
    || || || |||| || ||||||||| || ||||| ||||||||||| ||||||    
T  21228500 ttacccttatcagcaggggcactatagggcttagggcgactctgctggccctta 21228447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 257
Target Start/End: Complemental strand, 20853842 - 20853689
Alignment:
Q  104 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 203  Q
    |||||||| || ||||| |||||||||||||| |  || ||| |||||||||||||||| ||| | || || ||||||||||| |  ||| ||||||||     
T  20853842 ttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcccttcacaccacatttgtaacaaacaacatcaacaggagcat 20853743  T
Q  204 ctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtag 257  Q
     |||||  || |||  |||||||||||||| ||| || || ||||||| |||||    
T  20853742 ttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagtag 20853689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 139 - 307
Target Start/End: Original strand, 16379406 - 16379574
Alignment:
Q  139 agtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctc 238  Q
    ||||||||||||||| |||||||||||||| || ||    || ||||| |||||||||  | || || || |  | ||||||||||||||||| | ||||    
T  16379406 agtacaaacattacttttgtggcctttctcaccacaagcatagcaaacaatctcagcaacaacatctttctttctcggcctcctctcatcattaactctc 16379505  T
Q  239 tgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctca 307  Q
    || || || || |||| ||||||||| || || |||||||||||||| || ||||| ||| | ||||||    
T  16379506 tgtttgcccttatcagcagaggcactgtaaggcttaggacgactctgttgacccttgcctttccgctca 16379574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 51330436 - 51330384
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
    ||||| |||| || |||||| ||||| ||||||||||||||||||||||||||    
T  51330436 cctttatcagcaggggcactgtacggcttaggacgactctgctgtcccttacc 51330384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 297
Target Start/End: Complemental strand, 41350598 - 41350560
Alignment:
Q  259 ggcactatacggtttaggacgactctgctgtcccttacc 297  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  41350598 ggcactgtacggcttaggacgactctgctgtcccttacc 41350560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 33387973 - 33387924
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  33387973 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 33387924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 307
Target Start/End: Original strand, 21752455 - 21752527
Alignment:
Q  235 tctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctca 307  Q
    |||||| ||||| || |||| || |||||| || || ||||||||||||||||| |||||| || ||||||||    
T  21752455 tctctgttttcccttatcagcagtggcactgtaaggcttaggacgactctgctgacccttagcttttcgctca 21752527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 295
Target Start/End: Complemental strand, 22435694 - 22435634
Alignment:
Q  235 tctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctta 295  Q
    |||||| ||||| || ||||||| ||||||||| || ||||| ||||||||||| ||||||    
T  22435694 tctctgttttcccttatcagtaggggcactatagggcttagggcgactctgctggccctta 22435634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 6373 - 6065
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    ||||||||||||| |  |||| ||||| | |||||| ||||||| |||||| || || || ||||||| ||| |||||||| ||||||  |||   |||     
T  6373 tctaaccttcttctgttgtgtgcactgagtactgatgtggccctattcgttacaattatagcatacaatatcgccacgcttacaatcagctagcacgtga 6274  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || |||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||| || |||||  ||||||| |||||  ||||||    
T  6273 cccttctgaccacacctgaagcacttcttctcatccttggtacaaacgttactcttgtggcctttctcgccacacttaaaacaaactatctcgacaggag 6174  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || |||||||||| ||||||||||||||||||||||| ||||| || ||||||| || |||||| ||||| |||||||||||||| ||||||||||||||    
T  6173 catctctcctattcggcctcctctcatcattcagtctttgcttacccttgtcagcaggggcactgtacggcttaggacgactctgttgtcccttacctct 6074  T
Q  301 tcgctcact 309  Q
    ||| |||||    
T  6073 tcgttcact 6065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 133; Significance: 4e-69; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 17266629 - 17266321
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||| |||| ||||| | |||||| || |||||||| || || || || |||||||||||||| |||||||||||   |||  ||||     
T  17266629 tctaaccttcttcggctgtgtgcactgagtactgatgtgaccctcttcattacaattatagcatacaacatcaccgcgcttgcaatcggctagcatgtga 17266530  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || ||||| |||||||||||||| |||||||||||||  |||||||| ||||||||||| |||||||| || |||||  |||| || |||||||||||||    
T  17266529 cccttctgtccacacctgaagcacttcttctcatcctcggtacaaacgttactcttgtgacctttctcgccacacttaaaacacactatctcagcaggag 17266430  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || | ||| || | ||||||||||||||||| ||||||||||| || ||||||| || ||||||||||||||||||||||||||| || || ||||||||    
T  17266429 catccctcttactcggcctcctctcatcattaagtctctgcttacccttgtcagcaggggcactatacggtttaggacgactctgatgccctttacctct 17266330  T
Q  301 tcgctcact 309  Q
    |||||||||    
T  17266329 tcgctcact 17266321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 6 - 297
Target Start/End: Complemental strand, 23078195 - 23077904
Alignment:
Q  6 ccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtccttt 105  Q
    ||||||||||| | || |||| |||||||||||| || ||||||||||||||||| || ||||  || |||||||| || |||  |||||||||||||||    
T  23078195 ccttcttcggctgagtacactatgaactgatatgaccttcttcgttgcagttgtagcaaacaatgtctccacgcttacattcagctagggtgtgtccttt 23078096  T
Q  106 ctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagct 205  Q
    ||||||||||||||| |||||| |||||||  ||  |||| |||| || ||||||||||| || || |||||| |||| || ||||||||||||||| ||    
T  23078095 ctgaccacacctgaaacatttcctctcatctctaccacaagcattgcttttgtggcctttttcaccacacttgaaacatacaatctcagcaggagcatct 23077996  T
Q  206 ctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
    ||||| ||||||||||| ||||||||||   ||||||| |||||||||| ||  ||||| || |||||||||||||||||||||||||||||    
T  23077995 ctcctcttgggcctcctatcatcattcatcttctgcttccctttgtcagcaggagcactgtaaggtttaggacgactctgctgtcccttacc 23077904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 23 - 297
Target Start/End: Original strand, 20345377 - 20345651
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||| ||||| || ||  | ||||||||||| || ||||  || ||||||||||| |||| |||  |||| || |||||||||||||||||||    
T  20345377 cactgtgaactaatatgaccttccccattgcagttgtagcagacaatgtccccacgcttgcattcaactagactgtgacccttctgaccacacctgaagc 20345476  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| | ||||| |||  ||||||||||||||||||| ||||||| || |||||||||||||| ||||||||||||||| ||||||| |||||||||||    
T  20345477 acttcctatcatctttaccacaaacattactcttgtgggctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgggcctcct 20345576  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||  ||   |||||||||||||||||| ||  |||||||| || ||||||||| ||| ||||||||||||    
T  20345577 atcatcacccatcttctgctttcctttgtcagcaggagcactataaggcttaggacgattctactgtcccttacc 20345651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 23 - 297
Target Start/End: Original strand, 22505774 - 22506048
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    |||||||||||||| || |||||| | ||||||||||| || ||||  || |||||||| || |||  || | | |||||  ||||||||||||||||||    
T  22505774 cactgtgaactgatgtgaccctctccattgcagttgtagcagacaatgtccccacgcttacattcagctaagctatgtcccatctgaccacacctgaagc 22505873  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| |||| || |||  ||||||||| ||||||||||||||||| || |||||||||||||| ||||||| ||||||| ||||||| || ||||||||    
T  22505874 acttcctctcgtctttaccacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcct 22505973  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||||||   |||||||||||||||||| ||  ||||| || || ||||||||| ||||||||||||||||    
T  22505974 atcatcattcatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacc 22506048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 23 - 297
Target Start/End: Original strand, 25851167 - 25851441
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||| ||||| |||||| | ||||||||||| || ||||  || ||||||||| | |||  |||  |||| || |||||||||||||||||||    
T  25851167 cactgtgaactaatatgaccctctccattgcagttgtagcagacaatgtctccacgcttgtattcagctagactgtgacccttctgaccacacctgaagc 25851266  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| | ||||| |||  ||||||||||||||||||||||||||| || |||||||| ||||| |||||| || ||||| ||||||| |||||||||||    
T  25851267 acttcctatcatctttaccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaagagcatctctcctcttgggcctcct 25851366  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||  ||   |||||||||||||||||| ||  ||||| || || ||||||||| ||||||||||||||||    
T  25851367 atcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacc 25851441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 2 - 309
Target Start/End: Complemental strand, 23563462 - 23563155
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||||||| | || ||||| ||||| ||||| || || || |||||||| ||||| |||   || |||| ||| || |||  ||| |||||||    
T  23563462 ctaaccttcttcggctgcgtacactgcgaactaatatgaccttcctcattgcagttataacaaacattgtctccacccttacagtcagctagtgtgtgtc 23563363  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    |||||||||||||||||||||| |||||||||||  ||  ||| |||||||||||||||||||| || || |||||| | ||||| || |||| ||||||    
T  23563362 ctttctgaccacacctgaagcacttcttctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatgtcagtaggagc 23563263  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctt-tcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    | ||||||| |||||||||||||||| ||| |  |||||||| |||||| |||| ||  ||||||||||| || |||| ||||| |||||||||||||||    
T  23563262 atctctcctcttgggcctcctctcattatttaacctctgcttatccttt-tcagcaggagcactatacggcttcggacaactcttctgtcccttacctct 23563164  T
Q  301 tcgctcact 309  Q
     || |||||    
T  23563163 acgttcact 23563155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 23 - 297
Target Start/End: Complemental strand, 14884264 - 14883990
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||| ||||| || ||  | |||||||||||||| ||||  || ||||||||||| |||   |   |||| || |||||||||||||||||||    
T  14884264 cactgtgaactaatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagccaaactgtgacccttctgaccacacctgaagc 14884165  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| | |||||  |   ||| ||||||||||||||||||||||| || |||||||||||||| |||||||| |||||| ||||||| |||||||||||    
T  14884164 acttcctatcatctctcccacagacattactcttgtggcctttctcaccacacttgtaacaaacaatctcagctggagcatctctcctcttgggcctcct 14884065  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||  ||  ||||||||||||||||||||||  ||||| || || ||||||||| |||| |||||||||||    
T  14884064 atcatcacccatcctctgctttcctttgtcagtaggagcactgtaaggcttaggacgattctgttgtcccttacc 14883990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 142 - 309
Target Start/End: Complemental strand, 21870432 - 21870265
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 241  Q
    ||||||||||||||||||| ||||||| || |||||| | ||||  ||||||| ||||||| ||||||| || ||||||||| ||||||||| | |||||    
T  21870432 acaaacattactcttgtggtctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaggcctcctcccatcattcaatttctgc 21870333  T
Q  242 tttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    || || ||||||| || |||||||||||| || |||||||||||||||||||| ||||| ||||||||    
T  21870332 ttacccttgtcagcaggggcactatacggcttcggacgactctgctgtcccttgcctctacgctcact 21870265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 142 - 309
Target Start/End: Complemental strand, 21874712 - 21874545
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 241  Q
    ||||||||||||||||||| ||||||| || |||||| | ||||  ||||||| ||||||| ||||||| || ||||||||| ||||||||| | |||||    
T  21874712 acaaacattactcttgtggtctttctcaccacacttgaagcaaattatctcagtaggagcatctctcctcttaggcctcctcccatcattcaatttctgc 21874613  T
Q  242 tttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    || || ||||||| || |||||||||||| || |||||||||||||||||||| ||||| ||||||||    
T  21874612 ttacccttgtcagcaggggcactatacggcttcggacgactctgctgtcccttgcctctacgctcact 21874545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 143 - 253
Target Start/End: Original strand, 23669847 - 23669957
Alignment:
Q  143 caaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgct 242  Q
    |||||||||||||||||||||||||| || |||| |||  |||| ||||||||||||||| ||||||| || || |||||||||||||||| ||| ||||    
T  23669847 caaacattactcttgtggcctttctcaccacactggtaggaaacaatctcagcaggagcatctctcctcttaggtctcctctcatcattcaatctttgct 23669946  T
Q  243 ttcctttgtca 253  Q
     ||||||||||    
T  23669947 ctcctttgtca 23669957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 240
Target Start/End: Complemental strand, 16258272 - 16258092
Alignment:
Q  60 aacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtg 159  Q
    |||| |||| ||||||||||||||| |||  ||  || || |||||||  ||||| | |||||| |||||||| ||   | | |||||||||||||||||    
T  16258272 aacaaacaatatcaccacgcttgcattcagctattgtatgccctttcttcccacatcggaagcacttcttctcctcaccattgcaaacattactcttgtg 16258173  T
Q  160 gcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 240  Q
    ||| ||||| || |||||||| ||||| |||||||||||| || ||||||| || || |||||||||||| ||| ||||||    
T  16258172 gcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcagtcaatctctg 16258092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 2 - 253
Target Start/End: Original strand, 43122541 - 43122792
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||| ||| |||| ||||||||||||| ||| || |||||||  || ||| | || |||| ||||||||||||||| |||  ||  |  || |    
T  43122541 ctaaccttcttaggctgtgtacactgtgaactgagatgtccttcttcgtcacaattgaagcaaacaatatcaccacgcttgcattcagctatcgcatgcc 43122640  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    | ||||  ||||| | |||||| |||||||| ||   | | || |||||||||||||||||  |||| || |||||||| ||||| ||||| ||| || |    
T  43122641 ccttctttccacatcggaagcacttcttctcctcaccattgcagacattactcttgtggcccctctcgccacacttgtagcaaacaatctctgcatgaac 43122740  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtca 253  Q
    | ||||||| || || |||||||||||||||| ||| |||| ||||||||||    
T  43122741 atctctcctcttaggtctcctctcatcattcaatctttgctctcctttgtca 43122792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 22591908 - 22591811
Alignment:
Q  143 caaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 240  Q
    |||||||||||||||||||| ||||| || |||||||| ||||| |||||||||||| || ||||||| || || |||||||||||| ||| ||||||    
T  22591908 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcagtcaatctctg 22591811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 240
Target Start/End: Complemental strand, 22595463 - 22595366
Alignment:
Q  143 caaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctg 240  Q
    |||||||||||||||||||| ||||| || |||||||| ||||| |||||||||||| || ||||||| || || |||||||||||| ||| ||||||    
T  22595463 caaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggatcatctctcctcttaggtctcctctcatcagtcaatctctg 22595366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 145 - 254
Target Start/End: Complemental strand, 21983328 - 21983219
Alignment:
Q  145 aacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgcttt 244  Q
    |||||||||||||||||| ||||| || ||| | || ||||| |||||||||||| || |||| || || || |||||||||||||||| ||| |||||     
T  21983328 aacattactcttgtggcccttctcaccacacctatagcaaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattcaatctttgcttc 21983229  T
Q  245 cctttgtcag 254  Q
    ||||||||||    
T  21983228 cctttgtcag 21983219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 145 - 254
Target Start/End: Complemental strand, 21561176 - 21561067
Alignment:
Q  145 aacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgcttt 244  Q
    |||||||||||||||||| ||||  || |||||| | ||||| |||||||||||| || |||| || || || |||||||||||||||| ||| || ||     
T  21561176 aacattactcttgtggcccttcttaccacacttgaagcaaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattcaatctttgtttc 21561077  T
Q  245 cctttgtcag 254  Q
    ||||||||||    
T  21561076 cctttgtcag 21561067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 288
Target Start/End: Complemental strand, 26735882 - 26735736
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 241  Q
    |||| |||||||||| ||||||||||| |  ||  |||| ||||| |||||| |||||||| || || |  | ||||||||||||||||| | ||| ||     
T  26735882 acaagcattactcttatggcctttctcacaacaagtgtagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattaactctttgt 26735783  T
Q  242 tttcctttgtcagtagaggcactatacggtttaggacgactctgctg 288  Q
    |||||||| |||||||  ||||| || || || ||||||||||||||    
T  26735782 tttcctttatcagtaggagcactgtaaggctttggacgactctgctg 26735736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 186
Target Start/End: Original strand, 20824626 - 20824711
Alignment:
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaac 186  Q
    ||||||||||| || ||||| |||||||||||||| | ||| ||| |||||||||||||||| ||| | || || |||||||||||    
T  20824626 cctttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggcccttcacaccacatttgtaacaaac 20824711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 186
Target Start/End: Complemental strand, 28892137 - 28892052
Alignment:
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaac 186  Q
    ||||||||||| || ||||| |||||||||||||| | ||| ||| |||||||||||||||| ||| | || || |||||||||||    
T  28892137 cctttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggcccttcacaccacatttgtaacaaac 28892052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 18782346 - 18782406
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 202  Q
    ||||||||||||||||||||||||||| || || ||| ||||||| ||||| |||||||||    
T  18782346 acaaacattactcttgtggcctttctcgccacagttgaaacaaacaatctccgcaggagca 18782406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 27521738 - 27521790
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
    |||||||||| || |||||| ||||| ||||||||||||||||||||||||||    
T  27521738 cctttgtcagcaggggcactgtacggcttaggacgactctgctgtcccttacc 27521790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 22137990 - 22138049
Alignment:
Q  235 tctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    |||||| || ||||| |||| || |||||| ||||| |||||||||||||||||||||||    
T  22137990 tctctgtttccctttatcagcaggggcactgtacggcttaggacgactctgctgtccctt 22138049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 186
Target Start/End: Original strand, 20779089 - 20779171
Alignment:
Q  104 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaac 186  Q
    |||||||| || ||||| |||||||||||||| |  || ||| |||||||||||||||| ||| | || || |||||||||||    
T  20779089 ttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcccttcacaccacatttgtaacaaac 20779171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 14996793 - 14996744
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||| |||| || |||||| ||||| |||||||||||||||||||||||    
T  14996793 cctttatcagcaggggcactgtacggcttaggacgactctgctgtccctt 14996744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 16359834 - 16359883
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  16359834 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 16359883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 22329941 - 22329892
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||| |||| || |||||| ||||| |||||||||||||||||||||||    
T  22329941 cctttatcagcaggggcactgtacggcttaggacgactctgctgtccctt 22329892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 27665557 - 27665508
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  27665557 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 27665508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 27682454 - 27682405
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||| |||| || |||||| ||||| |||||||||||||||||||||||    
T  27682454 cctttatcagcaggggcactgtacggcttaggacgactctgctgtccctt 27682405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 34569826 - 34569875
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  34569826 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 34569875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 40712112 - 40712161
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||||||||  | |||||| ||||| |||||||||||||||||||||||    
T  40712112 cctttgtcagcgggggcactgtacggcttaggacgactctgctgtccctt 40712161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 202
Target Start/End: Original strand, 20803797 - 20803889
Alignment:
Q  110 ccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 202  Q
    ||||||| ||| ||||||||| | |||| ||  |||||||| ||||||||||||||||| ||  | ||| |||| || ||||| |||||||||    
T  20803797 ccacaccagaaacatttcttcacctcctcagggcaaacatttctcttgtggcctttctcaccataattgaaacagacaatctccgcaggagca 20803889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 129; Significance: 9e-67; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 5325 - 5017
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||   ||| |||| |||||||||||||||||| || |||||||| || || |||||||| |  ||||| ||||||  ||  ||||||    
T  5325 tctaaccttcttcggttatgtacactatgaactgatatggccctcctcattgcagttatagcaaacaacatctctccgcttacaatcagctaaagtgtgt 5226  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || |||||||||||||||||||| |||||||||||||||  ||| |||||||||||||||||||| || || |||||||| ||||| |||||||||||||    
T  5225 cccttctgaccacacctgaagcacttcttctcatccttatcacagacattactcttgtggcctttttcgccacacttgtagcaaacaatctcagcaggag 5126  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || |||||||  | |||| |||||||| |||||| || |||||||| ||||||| ||  |||||||| |||||||||||||||| || ||| ||||||||    
T  5125 catctctcctcctaggccacctctcattattcagcctttgctttcccttgtcagcaggagcactatatggtttaggacgactctactttcctttacctct 5026  T
Q  301 tcgctcact 309  Q
    ||| |||||    
T  5025 tcgttcact 5017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 2819 - 3118
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||||||  |||  ||||||||||||||||||||||| || |||||||| || || || |  || || ||||| ||||||  ||  ||||||    
T  2819 tctaaccttcttcggttgtgcacactgtgaactgatatggccctcctcattgcagttatagcaaactatgtctccccgcttacaatcagctaatgtgtgt 2918  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    || ||||| |||||||||||| | ||||||||||| |||  ||||||||||||||||||||||||||  || |||||||| ||||| |||||| ||||||    
T  2919 cccttctgtccacacctgaagaacttcttctcatctttatcacaaacattactcttgtggcctttcttaccacacttgtagcaaacaatctcaacaggag 3018  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || ||||||| ||||||||||||||||||||||  ||||| ||||||||||||| ||  |||||||||||||||||| ||||||||||||  ||||||||    
T  3019 catctctcctcttgggcctcctctcatcattcaacctctgttttcctttgtcagcaggagcactatacggtttaggatgactctgctgtcatttacctct 3118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 124; Significance: 9e-64; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 2 - 309
Target Start/End: Original strand, 5242 - 5549
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||||||  | || ||||| ||||||||||| || || || |||||||| ||||| ||||| || || ||||| |||| |  ||  |||||||    
T  5242 ctaaccttcttcggttgagtacactgcgaactgatatgaccttcctcattgcagttataacaaacaacgtctccccgcttacaattagctaatgtgtgtc 5341  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    |||||| ||||||||||||||| ||||||||||| |||  ||| ||||||||| ||||||||||||| || |||||||| ||||| ||||||||||||||    
T  5342 ctttctaaccacacctgaagcacttcttctcatctttatcacagacattactcctgtggcctttctcgccgcacttgtagcaaacaatctcagcaggagc 5441  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
    | |||||||  |||||||||||||||||||||  ||||| ||||| || |||| ||  |||||||| ||||||||||||||||| ||||| |||||||||    
T  5442 atctctcctcgtgggcctcctctcatcattcaacctctgttttcccttatcagcaggagcactatatggtttaggacgactctgttgtcctttacctctt 5541  T
Q  302 cgctcact 309  Q
    || |||||    
T  5542 cgttcact 5549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 124; Significance: 9e-64; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 2 - 309
Target Start/End: Original strand, 37128 - 37435
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||||||| | || ||||||||||||||||| || || || |||||||| || || |||| ||| |||| ||| ||||||  ||| |||||||    
T  37128 ctaaccttcttcggctgcgtacactgtgaactgatatgaccttcctcattgcagttatagcaaacaatatccccacacttacaatcagctagtgtgtgtc 37227  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    | |||||||||||||||||||| ||||||||||| |||  ||||||||||||||||||||||||||| || |||||| | ||||  || |||| |||||     
T  37228 ccttctgaccacacctgaagcacttcttctcatctttatcacaaacattactcttgtggcctttctcgccacacttgaagcaaaaaatatcagtaggagt 37327  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
      ||||||| |||||||||||||||||||||| ||||||||| || ||||| | |   ||||||||||| || ||||||||||||||||||||||||||     
T  37328 gtctctcctcttgggcctcctctcatcattcaatctctgcttacccttgtcggcaagagcactatacggcttcggacgactctgctgtcccttacctcta 37427  T
Q  302 cgctcact 309  Q
    || |||||    
T  37428 cgttcact 37435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 970 - 764
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||| ||||  | || ||||||||||||||||| |||||||| |||||||| ||||| |||| |||||||||||||||||||  ||| ||||||    
T  970 tctaaccttcctcggttgcgtacactgtgaactgatatgaccctcttcattgcagttataacaaacaatatcaccacgcttgcaatcagctagagtgtgt 871  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||  || |||||||||||||| |||||||||||||    
T  870 cctttctgaccacacctgaagcacttcttctcatctttagtacaaacattactcttatggcctttcttgccacacttgtaacaaacaatctcagcaggag 771  T
Q  201 cagctct 207  Q
    || ||||    
T  770 catctct 764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 123; Significance: 3e-63; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 325895 - 326136
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    |||||||||||| ||  |||| |||||||||||||||||||||||||| |||||||| ||||| |||||||| || ||||| |||| |  ||  ||||||    
T  325895 tctaaccttctttggttgtgtgcactgtgaactgatatggccctcttcattgcagttataacaaacaacatctccccgcttacaattagctaatgtgtgt 325994  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    ||||||||||||||| ||||||| ||||||||||| |||  ||| ||||||||||||||| ||||||| || |||||||| ||||| |||||||||||||    
T  325995 cctttctgaccacacttgaagcacttcttctcatctttatcacagacattactcttgtggtctttctcgccacacttgtagcaaacaatctcagcaggag 326094  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctt 243  Q
    || |||||||||| |||||||||||||||||||| ||||||||    
T  326095 catctctcctatt-ggcctcctctcatcattcagcctctgctt 326136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 52 - 309
Target Start/End: Original strand, 319482 - 319739
Alignment:
Q  52 gcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacatta 151  Q
    |||||| ||||| |||||||| || ||||| |||| |  ||  ||||||||||||||||||||||||||||| ||||||||||| |||  ||| ||||||    
T  319482 gcagttataacaaacaacatctccccgcttacaattagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctttatcacagacatta 319581  T
Q  152 ctcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgt 251  Q
    ||||||||||||||||| || |||||||| ||||| ||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||  | ||||    
T  319582 ctcttgtggcctttctcgccacacttgtagcaaacaatcccagcaggagcatctctcctattgggcctcctctcatcattcagcctctgcttatccttgt 319681  T
Q  252 cagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    ||| ||  ||||||||||| || ||||||||||||||||| || || ||||| |||||    
T  319682 cagcaggagcactatacggcttcggacgactctgctgtcctttgccccttcgatcact 319739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 101 - 254
Target Start/End: Complemental strand, 200493 - 200340
Alignment:
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    |||||||  ||||| | |||||| |||||||||||   | | |||||||||||||||||||| ||||| || |||||||| ||||| ||||||  ||||     
T  200493 cctttcttcccacatcggaagcacttcttctcatcaccattgcaaacattactcttgtggcccttctcaccacacttgtagcaaacaatctcattaggaa 200394  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcag 254  Q
    |  |||| || || || |||||||||||||||| ||| | ||| ||||||||||    
T  200393 cttctcttctcttaggtctcctctcatcattcaatctttacttccctttgtcag 200340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 309
Target Start/End: Complemental strand, 9136 - 8829
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    |||||||||||||   |||| ||||| ||| |||| || || || || |||||||| || || |||||||| || ||||| |||| |  ||  |||||||    
T  9136 ctaaccttcttcgtttgtgtacactgcgaattgatttgaccttcctcattgcagttatagcaaacaacatctccccgcttacaattagctaatgtgtgtc 9037  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    |||||||||||||||||||||| |||||||||||||||  ||| |||||||||||||||| |||||| || |||||||| ||||| |||| ||||| |||    
T  9036 ctttctgaccacacctgaagcacttcttctcatccttatcacagacattactcttgtggcttttctcaccacacttgtagcaaacaatcttagcagaagc 8937  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
    | ||||||| ||||||||||||||||||||||| ||||||||||| ||||| | ||  |||||||| |||||| ||| |||||||| ||| |||||||||    
T  8936 atctctcctcttgggcctcctctcatcattcagcctctgctttcccttgtctgcaggagcactatatggtttatgacaactctgctatcctttacctctt 8837  T
Q  302 cgctcact 309  Q
    || |||||    
T  8836 cgttcact 8829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 2 - 309
Target Start/End: Original strand, 5994 - 6300
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||||||  |||| ||||||||||| ||||| || || ||||||||||| ||||| ||||  || |||||||||||||||  ||| |||||||    
T  5994 ctaaccttcttcggttgtgtacactgtgaactaatatgtccttcctcgttgcagttataacaaacaatgtccccacgcttgcaatcagctagtgtgtgtc 6093  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    ||||||||||||| |||||||| |||||||||||  ||  ||| |||||||||||||||||||| || || |||||| | ||||| || |||| | ||||    
T  6094 ctttctgaccacatctgaagcacttcttctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatgtcagtaagagc 6193  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
    | ||||||| |||||||||||||||||||| |  || ||||| || ||||||||||  ||||||||||| || |||||||||||||||||||| |||||     
T  6194 atctctcctcttgggcctcctctcatcatttaacct-tgcttacccttgtcagtaggagcactatacggcttcggacgactctgctgtcccttgcctctg 6292  T
Q  302 cgctcact 309  Q
    || |||||    
T  6293 cgttcact 6300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 2 - 309
Target Start/End: Original strand, 50294 - 50601
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||| ||| | || ||||  ||||||||||| || || || ||||||||||| || |||| ||| |||||||| ||||||  || ||||||||    
T  50294 ctaaccttcttaggctgggtacactacgaactgatatgaccttcctcattgcagttgtagcaaacaatatccccacgcttacaatcagctaaggtgtgtc 50393  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagt-acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    ||||||||||||||||||| || ||||||||||| |  || ||||||||||||||||||| |||| || || |||||| ||||||| || |||| |||||    
T  50394 ctttctgaccacacctgaaacacttcttctcatc-tcggtcacaaacattactcttgtggtctttttcaccacacttgaaacaaacaatatcagtaggag 50492  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || ||||||| |||||||||||||||||||||  ||| ||||| || ||||||| || |||||||||||| || |||| ||||||||||||||| |||||    
T  50493 catctctcctcttgggcctcctctcatcattccatctatgcttacccttgtcagcaggggcactatacggcttcggaccactctgctgtcccttgcctct 50592  T
Q  301 tcgctcact 309  Q
     ||||||||    
T  50593 acgctcact 50601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 116; Significance: 5e-59; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 2 - 309
Target Start/End: Original strand, 34526 - 34833
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||||||| | || ||||  ||||| ||||| || || || |||||||| ||||| ||||| || |||||||| ||||||| ||  |||||||    
T  34526 ctaaccttcttcggctgcgtacactacgaactaatatgaccttcctcattgcagttataacaaacaacgtccccacgcttacaatcaactaatgtgtgtc 34625  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    |||||| ||||||||||||||| |||||||||||  ||  ||| ||||||||||||||||||||||| || |||||| ||||||| || |||| ||||||    
T  34626 ctttctaaccacacctgaagcacttcttctcatctctatcacagacattactcttgtggcctttctcaccacacttgaaacaaacaatgtcagtaggagc 34725  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
    | ||||||| |||||||||||||||||||| |  || ||||| || ||||||| ||  ||||||||| | || |||||||||||||||||||| |||||     
T  34726 atctctcctcttgggcctcctctcatcatttaacctttgcttacccttgtcagcaggagcactatacagcttcggacgactctgctgtcccttgcctctg 34825  T
Q  302 cgctcact 309  Q
    || |||||    
T  34826 cgttcact 34833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 309
Target Start/End: Complemental strand, 1964 - 1656
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    ||||| |||||| ||| | || ||||| |||||||| |||||||| || |  || || ||||| ||||||||||| | |||||| | |   |  ||||||    
T  1964 tctaatcttctttggctgagtgcactgggaactgatgtggccctcctcatcacaattataacaaacaacatcacccctcttgcagttagccaatgtgtgt 1865  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    ||||||||||||||||||||||| ||||||||||| || |||||||||||||| |||||||||||||| || ||||| || ||||  || ||||||| ||    
T  1864 cctttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttatagcaaattatttcagcagtag 1765  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || ||||||| |||||||| ||||||||||||||||  |||||||| ||||||| || |||||| ||||| |||||||||||||| | ||||||||| ||    
T  1764 catctctcctcttgggccttctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttaggacgactctgttttcccttacccct 1665  T
Q  301 tcgctcact 309  Q
     ||||||||    
T  1664 ccgctcact 1656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 23 - 294
Target Start/End: Original strand, 5391 - 5661
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||| ||||||||||| || ||||| || |||||||| || |||||||| |||||||| ||||||  ||  ||||||||||||||||||||||||||||    
T  5391 cactgcgaactgatatgaccttcttcattacagttgtagcaaacaacatccccacgcttacaatcagctaaagtgtgtcctttctgaccacacctgaagc 5490  T
Q  123 atttcttctcatccttagt-acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcc 221  Q
    | ||||||||||| |  || |||||||||||||||||||||||| || || |||||| ||||||| || |||| ||||||| ||||||| |||| |||||    
T  5491 acttcttctcatc-tcggtcacaaacattactcttgtggcctttttcaccacacttgaaacaaacaatatcagtaggagcatctctcctcttgg-cctcc 5588  T
Q  222 tctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    |||||||||||| ||||||||| || |||||||||| |||||| ||||| ||  || ||||||||||||||||    
T  5589 tctcatcattcaatctctgcttacccttgtcagtaggggcactgtacggcttccgatgactctgctgtccctt 5661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 108 - 309
Target Start/End: Original strand, 799 - 1000
Alignment:
Q  108 gaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctct 207  Q
    |||||||||||||| | ||||||||||| |||  ||| ||||||||||||||||||||||  || |||||||| ||||| ||||||||||||||| ||||    
T  799 gaccacacctgaagtacttcttctcatctttatcacagacattactcttgtggcctttctagccacacttgtagcaaacaatctcagcaggagcatctct 898  T
Q  208 cctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctca 307  Q
    ||| || ||||||||||||||||||| ||||||||| || ||||||| ||  |||||||| ||||||||||||||||| |||||||||||||| ||||||    
T  899 cctcttaggcctcctctcatcattcaatctctgcttacccttgtcagcaggagcactatatggtttaggacgactctgttgtcccttacctctgcgctca 998  T
Q  308 ct 309  Q
    ||    
T  999 ct 1000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 109; Significance: 8e-55; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 5 - 309
Target Start/End: Complemental strand, 1599 - 1295
Alignment:
Q  5 accttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctt 104  Q
    |||||||||||| | || ||||| ||||||||||| || ||||| ||||||||||| || ||||  || |||| ||| || |||  |||||||||||| |    
T  1599 accttcttcggctgagtacactgcgaactgatatgaccttcttcattgcagttgtagcaaacaatgtccccacacttacattcagctagggtgtgtccct 1500  T
Q  105 tctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagc 204  Q
    ||| ||||||||| || |||||| || ||||  ||  |||| |||| |||||||||||||| || || ||||||||||| || ||||||||||||||| |    
T  1499 tctaaccacacctaaaacatttcctcacatctctaccacaagcattgctcttgtggcctttttcaccacacttgtaacagacaatctcagcaggagcatc 1400  T
Q  205 tctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgc 304  Q
    |||||| ||||||||||| |||||||||| | |||| ||||| ||||||| ||  ||||| || || ||||||||||||||||||||||||||||| | |    
T  1399 tctcctcttgggcctcctatcatcattcattttctgttttcccttgtcagcaggagcactgtaaggcttaggacgactctgctgtcccttacctctcctc 1300  T
Q  305 tcact 309  Q
    |||||    
T  1299 tcact 1295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 2 - 309
Target Start/End: Complemental strand, 1426 - 1119
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||| ||| | || ||||| ||||||||||| || || || |||||  |||| || |||| ||| |||||||| || |||  ||  |||||||    
T  1426 ctaaccttcttaggctgagtacactgcgaactgatatgaccttcctcattgcaagtgtagcaaacaatatccccacgcttacattcagctaaagtgtgtc 1327  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    |||||||||||||||||||||| |||||||||||  ||  |||| ||||||||||||||||||| || || |||||| ||||||  ||||||| ||||||    
T  1326 ctttctgaccacacctgaagcacttcttctcatctctatcacaagcattactcttgtggcctttttcaccacacttgaaacaaattatctcagtaggagc 1227  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
    | ||||||| ||||||||||||||||||||||| ||||| || || ||||||| ||  ||||| || || || ||||||||||| |||||||| |||||     
T  1226 atctctcctcttgggcctcctctcatcattcagcctctgtttacccttgtcagcaggagcactgtatggcttcggacgactctgttgtcccttgcctcta 1127  T
Q  302 cgctcact 309  Q
    ||||||||    
T  1126 cgctcact 1119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 2 - 309
Target Start/End: Original strand, 7933 - 8240
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||| ||| | || ||||| ||||||||||| || || || |||||  |||| || |||| ||| |||||||| || |||  ||  |||||||    
T  7933 ctaaccttcttaggctgagtacactgcgaactgatatgaccttcctcattgcaagtgtagcaaacaatatccccacgcttacattcagctaaagtgtgtc 8032  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    |||||||||||||||||||||| |||||||||||  ||  |||| ||||||||||||||||||| || || |||||| ||||||  ||||||| ||||||    
T  8033 ctttctgaccacacctgaagcacttcttctcatctctatcacaagcattactcttgtggcctttttcaccacacttgaaacaaattatctcagtaggagc 8132  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
    | ||||||| ||||||||||||||||||||||| ||||| || || ||||||| ||  ||||| || || || ||||||||||| |||||||| |||||     
T  8133 atctctcctcttgggcctcctctcatcattcagcctctgtttacccttgtcagcaggagcactgtatggcttcggacgactctgttgtcccttgcctcta 8232  T
Q  302 cgctcact 309  Q
    ||||||||    
T  8233 cgctcact 8240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 6 - 297
Target Start/End: Original strand, 11170 - 11461
Alignment:
Q  6 ccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtccttt 105  Q
    ||||||||||| | || |||||||| |||||||| |||||||| ||||||||||| || ||||  || |||||||| || |||  ||| | |||||| ||    
T  11170 ccttcttcggctgagtacactgtgagctgatatgaccctcttcattgcagttgtagcagacaatgtccccacgcttacattcagctagtgcgtgtccctt 11269  T
Q  106 ctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagct 205  Q
    |||||||||||||||||| ||| |||||||  ||  |||| |||| |||||||||||||| || || |||||||||||||| ||||||| ||||||| ||    
T  11270 ctgaccacacctgaagcacttcctctcatctctaccacaagcattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatct 11369  T
Q  206 ctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
    ||||| || || ||||| ||||||||||   |||||||||||||||||| ||  |||||||| || ||||||||| ||||||| ||||||||    
T  11370 ctcctcttaggactcctatcatcattcaaaatctgctttcctttgtcagcaggagcactataaggcttaggacgaatctgctgacccttacc 11461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 2 - 309
Target Start/End: Original strand, 16826 - 17133
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||| | | | || ||||| ||||| ||||| || || || || |||||||| || |||| ||| |||||||||||||||   |  |||||||    
T  16826 ctaaccttcttagtctgcgtacactgcgaactaatatgtccttcctcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtc 16925  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    |||||||||||||||| ||||| |||||||||||   |  ||| |||||||||||||||||||||||||| |||||| ||||||  ||||||| ||||||    
T  16926 ctttctgaccacacctaaagcacttcttctcatctcgatcacacacattactcttgtggcctttctctccacacttgaaacaaataatctcagtaggagc 17025  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
    | ||||||| || ||||||||||||||||||||| ||||||| || ||||| | ||  ||||||||||| || ||||||||||| |||||||| ||| |     
T  17026 atctctcctcttaggcctcctctcatcattcagtttctgcttacccttgtcggcaggagcactatacggcttcggacgactctgttgtcccttgcctttg 17125  T
Q  302 cgctcact 309  Q
    ||||||||    
T  17126 cgctcact 17133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 108; Significance: 3e-54; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 2 - 309
Target Start/End: Complemental strand, 62887 - 62580
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||| ||||| ||| | || ||||| ||||||||||| || | ||| || ||||||||  | |||||||| |||||||| ||||||  ||  ||||||     
T  62887 ctaactttcttaggctgcgtacactgcgaactgatatgaccttattcattacagttgtagaaaacaacatccccacgcttacaatcagctaaagtgtgta 62788  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    |||||||||||||||| ||||| ||||||||||| |    ||| ||||||||||||||||||||||| || |||||| |  |||| || |||| ||||||    
T  62787 ctttctgaccacacctaaagcacttcttctcatcatggtcacatacattactcttgtggcctttctcaccacacttgaattaaacaatatcagtaggagc 62688  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
    | ||||||| || ||||||||||||||||||| ||||||||| || ||||||| || |||||||||||| || |||||||||||||| ||||| |||||     
T  62687 atctctcctcttaggcctcctctcatcattcaatctctgcttacccttgtcagcaggggcactatacggcttcggacgactctgctgccccttgcctcta 62588  T
Q  302 cgctcact 309  Q
    ||||||||    
T  62587 cgctcact 62580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 202
Target Start/End: Complemental strand, 65413 - 65213
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||| ||| | || |||||||||||||| ||||| || || |  || || ||||| |||||||| || | ||| |||| |   |  |||||||    
T  65413 ctaaccttctttggctgggtgcactgtgaactgatgtggccttcctcatcacaattataacaaacaacatctcctctcttacaattagccaacgtgtgtc 65314  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    |||||||||||||||||||||| || |||||||| || ||||||||||||||||||||||||||||| || |||||||||||||| | ||||||||||||    
T  65313 ctttctgaccacacctgaagcactttttctcatctttggtacaaacattactcttgtggcctttctcgccacacttgtaacaaacaacctcagcaggagc 65214  T
Q  202 a 202  Q
    |    
T  65213 a 65213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 23 - 297
Target Start/End: Complemental strand, 1701 - 1427
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||||||||| |||||| | ||||||||||| || | ||  || ||||||||||| |||  ||   ||||||| |||||||||||||||||||    
T  1701 cactgtgaactgatatgaccctctccattgcagttgtagcagataatgtccccacgcttgcattcagctaaactgtgtcccttctgaccacacctgaagc 1602  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| ||||||| |||  |||||||||||||||||| |||||||| || |||||||||||||| ||||||| ||||||| ||||||| || ||||||||    
T  1601 acttcctctcatctttaccacaaacattactcttgtgtcctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcct 1502  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     |||||| |||   |||||||||||||||||| ||  ||||| || || ||| ||||| ||||||||||||||||    
T  1501 atcatcactcatcttctgctttcctttgtcagcaggagcactgtaaggcttatgacgattctgctgtcccttacc 1427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 2 - 300
Target Start/End: Complemental strand, 930 - 632
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||| ||| | || ||||| ||||||||||| || || ||||||||||| ||||| ||||  || |||||||| ||||||  ||| |||||||    
T  930 ctaaccttctttggctgcgtacactgcgaactgatatgtccttcctcgttgcagttataacaaacaatgtccccacgcttacaatcagctagtgtgtgtc 831  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    | |||||||||||||||||||| |||||||||||  ||  |||||||||||||||||||||||| || || |||||| | ||| | || || | ||||||    
T  830 ccttctgaccacacctgaagcacttcttctcatctctatcacaaacattactcttgtggcctttttcaccacacttgaagcaatcaatgtccgtaggagc 731  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    | ||||||| |||||||||||||||||||| |  |||||||| || ||||| | ||  ||||||||||| || |||||||| ||||||||||| |||||    
T  730 atctctcctcttgggcctcctctcatcatttaacctctgcttccccttgtcggcaggagcactatacggcttcggacgactttgctgtcccttgcctct 632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 95 - 309
Target Start/End: Complemental strand, 567 - 353
Alignment:
Q  95 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 194  Q
    ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| |||||||||||||| || |||||  | ||||| |||||||    
T  567 gtgtgtcctttctgaccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatctcag 468  T
Q  195 caggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
     ||||||| ||||||| ||||| || |||||||||||||| |  |||||||| ||||||| || || ||| ||||| |||||||||||||| ||||||||    
T  467 taggagcatctctcctcttgggtcttctctcatcattcagccgttgctttcccttgtcagcagggggactgtacggcttaggacgactctgttgtccctt 368  T
Q  295 acctcttcgctcact 309  Q
    ||| || ||||||||    
T  367 acccctccgctcact 353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 23 - 297
Target Start/End: Complemental strand, 514447 - 514173
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||||||||| |||||| | ||||||||||| || ||||  || |||| ||| || |||  || | ||||||| |||||||||||||||||||    
T  514447 cactgtgaactgatatgaccctctccattgcagttgtagcagacaatgtccccacacttacattcagttaagctgtgtcccttctgaccacacctgaagc 514348  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| |||| || |||  ||||||||| ||||||||||||||||| || |||||||||||||| ||||||| ||||||| ||||||| || ||||||||    
T  514347 acttcctctcgtctttaccacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcct 514248  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||||||   ||| |||||||||||||| ||  ||||| || || ||||||||| ||||||||||||||||    
T  514247 atcatcattcatcttcttctttcctttgtcagcaggagcactttaaggcttaggacgattctgctgtcccttacc 514173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 2 - 309
Target Start/End: Original strand, 70297 - 70604
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||| ||| | || ||||| ||||| ||||| || || || || |||||||| || |||| ||| |||||||||||||||   |  |||||||    
T  70297 ctaaccttcttaggctgcgtacactgcgaactaatatgtccttcctcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtc 70396  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagt-acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    ||||||| ||||| ||||| || ||||||||||| |  || ||| ||||||||||||||||||||||| || |||||  | ||||  ||||||| |||||    
T  70397 ctttctgtccacatctgaaacacttcttctcatc-tcggtcacacacattactcttgtggcctttctcaccacacttaaagcaaataatctcagtaggag 70495  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    || ||||||| || |||||||||||||||||||| ||||| || |||||||||| ||  |||||||||||||| ||||||||||| ||||||||||||||    
T  70496 catctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactatacggtttcggacgactctgttgtcccttacctct 70595  T
Q  301 tcgctcact 309  Q
     ||||||||    
T  70596 gcgctcact 70604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 104; Significance: 7e-52; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 2 - 309
Target Start/End: Complemental strand, 4419 - 4112
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||| ||| | || ||||| ||||| ||||| || || || || |||||||| || |||| ||| |||||||||||||||   |  |||||||    
T  4419 ctaaccttcttaggctgcgtacactgcgaactaatatgtccttcctcattacagttgtagcaaacaatatccccacgcttgcaatcagccaatgtgtgtc 4320  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    |||||||||||||||| ||||| |||||||||||   |  ||| |||||||| |||| | ||||||| || |||||| | ||||  ||||||| ||||||    
T  4319 ctttctgaccacacctaaagcacttcttctcatctcgatcacacacattacttttgtagtctttctcaccacacttgaagcaaataatctcagtaggagc 4220  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
    | ||||||| || |||||||||||||||||||  ||||| || |||||||||| ||  |||||||||||||| |||||||||| |||||||||||||||     
T  4219 atctctcctcttaggcctcctctcatcattcaacctctgtttacctttgtcagcaggagcactatacggtttcggacgactctactgtcccttacctctg 4120  T
Q  302 cgctcact 309  Q
    ||||||||    
T  4119 cgctcact 4112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 104; Significance: 7e-52; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 2 - 309
Target Start/End: Complemental strand, 998 - 691
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||||||  | || ||||| ||||||||||| || || || |||||||| ||| | ||||  || |||||||| ||||||  ||| |||| ||    
T  998 ctaaccttcttcggttgcgtacactgcgaactgatatgaccttcctcattgcagttataataaacaatgtccccacgcttacaatcagctagagtgtatc 899  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    |||||||||||||||||||||| |||||||||||  ||  |||||| ||||||||||||||||| || || |||||| | ||||| ||||| | ||||||    
T  898 ctttctgaccacacctgaagcacttcttctcatctctatcacaaacgttactcttgtggcctttttcaccacacttgaagcaaacaatctcggtaggagc 799  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
    | ||||||| |||||||||||||||||||| |  |||| ||| || ||||||| ||  ||| ||||||| || ||||||||||| ||||||||||||||     
T  798 atctctcctcttgggcctcctctcatcatttaacctcttcttacccttgtcagcaggagcattatacggcttcggacgactctgttgtcccttacctctg 699  T
Q  302 cgctcact 309  Q
    || |||||    
T  698 cgttcact 691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 4 - 309
Target Start/End: Original strand, 51842 - 52147
Alignment:
Q  4 aaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcct 103  Q
    ||||||||| ||| | || ||||||||||| ||||  || ||||| |  ||||| ||  | |||||||||||| ||||||||| |  ||  |||||||||    
T  51842 aaccttctttggctgcgtacactgtgaactaatattaccttcttcatcacagttatagaaaacaacatcaccatgcttgcaataagctaaagtgtgtcct 51941  T
Q  104 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 203  Q
    |||| ||||||||| ||||| |||||||||||   |  ||| ||||||||||||||||||||||| || |||||| |||| |  ||||||| |||||||     
T  51942 ttcttaccacacctaaagcacttcttctcatctcgatcacatacattactcttgtggcctttctcaccacacttgaaacagataatctcagtaggagcat 52041  T
Q  204 ctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcg 303  Q
    |||||||  | |||||||||||||||||||| ||||| || |||||||||| ||  ||||||||| |||| ||||| |||||||||||||||||||| ||    
T  52042 ctctcctcctaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactatacagtttcggacggctctgctgtcccttacctctgcg 52141  T
Q  304 ctcact 309  Q
    ||||||    
T  52142 ctcact 52147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 28 - 300
Target Start/End: Complemental strand, 961 - 689
Alignment:
Q  28 tgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttc 127  Q
    ||||||||| || || || ||||||||||| || || ||||  ||||||||||| ||||||  ||| ||||||||||||||||||||| ||||||| |||    
T  961 tgaactgatgtgaccttcctcgttgcagttatagcaaacaatgtcaccacgcttacaatcagctagtgtgtgtcctttctgaccacacatgaagcacttc 862  T
Q  128 ttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcat 227  Q
    ||||||||  ||  ||| |||||||||||||||||||| || || |||||| | ||||| || ||   ||||||| ||||||| ||||||||||||||||    
T  861 ttctcatctctatcacagacattactcttgtggcctttttcaccacacttgaagcaaacaatatccataggagcatctctcctcttgggcctcctctcat 762  T
Q  228 cattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctct 300  Q
    ||||||||| |||||| || ||||||| ||  | |||||| || || ||||||||||| ||||||||||||||    
T  761 cattcagtcgctgcttacccttgtcagcaggagtactatatggcttcggacgactctgttgtcccttacctct 689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 101; Significance: 5e-50; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 69 - 309
Target Start/End: Complemental strand, 4501 - 4261
Alignment:
Q  69 catcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctc 168  Q
    ||||||||||||| ||||||  ||  |||||||||||||||||||||||||||||||||||||||||  ||  ||||||||||||||| |||||||||||    
T  4501 catcaccacgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcatttcttctcatctctatcacaaacattactcttttggcctttctc 4402  T
Q  169 tcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatac 268  Q
     || |||||| | ||||| || |||| ||||||| ||||||| |||||||||||||||||||| |  |||||||| || ||||||| ||  ||| | |||    
T  4401 gccacacttgaagcaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcatttaaactctgcttacccttgtcagcaggagcagtgtac 4302  T
Q  269 ggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    || || ||||||||||| |||||||| ||||| || |||||    
T  4301 ggcttcggacgactctgttgtcccttgcctctacgttcact 4261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 35 - 199
Target Start/End: Complemental strand, 17148 - 16984
Alignment:
Q  35 atatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcat 134  Q
    ||||| |||||||| ||||||||| |||| || | ||||||| ||||||| |||  ||  ||||| || ||||  ||||||| ||| ||||||||| | |    
T  17148 atatgaccctcttctttgcagttgaaacacacgatatcaccatgcttgcagtcagctaatgtgtgacccttcttgccacaccagaaacatttcttcacct 17049  T
Q  135 ccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcagga 199  Q
    |||  | ||||||| | ||||||||||||||||| || || ||| |||||   ||||||||||||    
T  17048 cctctggacaaacagtgctcttgtggcctttctcaccacaattgaaacaagtaatctcagcagga 16984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 74 - 301
Target Start/End: Original strand, 153753 - 153980
Alignment:
Q  74 ccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctc 173  Q
    |||||||| ||||||  ||  ||||||||||||||||||||||||||||| |||||||||||  ||  ||| ||||||||||| |||| ||| || || |    
T  153753 ccacgcttacaatcagctaatgtgtgtcctttctgaccacacctgaagcacttcttctcatctctatcacagacattactcttatggcttttttcaccac 153852  T
Q  174 acttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggttt 273  Q
    ||||| | ||||| |||||||  |||||| ||||||| ||||||||||||||||||||||||| |||||| || ||||||| ||  |||||||| || ||    
T  153853 acttgaagcaaacaatctcagtgggagcatctctcctcttgggcctcctctcatcattcagtcgctgcttacccttgtcagcaggagcactatatggctt 153952  T
Q  274 aggacgactctgctgtcccttacctctt 301  Q
     |||||||||||||||||||||||||||    
T  153953 cggacgactctgctgtcccttacctctt 153980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 2 - 309
Target Start/End: Original strand, 5629 - 5933
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||| ||  | || ||||| ||||||||||| || ||||| || || ||||| || |||||||| |||||||| ||||||  ||  |||||||    
T  5629 ctaaccttcttaggttgcgtacactgcgaactgatatgaccttcttcattacaattgtagcaaacaacatccccacgcttacaatcagctaaagtgtgtc 5728  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    |||||||||||||||| ||||| |||||||||||   |  ||| || |||||||||||||||||||| || |||||| | ||||  ||||||| ||||||    
T  5729 ctttctgaccacacctaaagcacttcttctcatctcgatcacacacgttactcttgtggcctttctcaccacacttgaagcaaattatctcagtaggagc 5828  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
    | ||||||| ||  |||||||||||||||||| ||||||||| || ||||||| || |   |||||||| || |||||||| || ||||||||||||||     
T  5829 atctctcctcttaagcctcctctcatcattcaatctctgcttacccttgtcagcaggg---ctatacggcttcggacgactatgttgtcccttacctctg 5925  T
Q  302 cgctcact 309  Q
    ||||||||    
T  5926 cgctcact 5933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 297
Target Start/End: Complemental strand, 11837 - 11563
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||| ||| ||||| || ||| | |||||||||||||| ||||  || ||||||||||  |||  ||   |||| || |||||||||||||||||||    
T  11837 cactgtgtactaatatgaccttctccattgcagttgtaacagacaatgtccccacgcttgctttcagctaaactgtgacccttctgaccacacctgaagc 11738  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| | |||||  |   ||| ||||||||||||||||||||||  || |||||||| || || |||||| | || ||| ||||||| |||||| ||||    
T  11737 acttcctatcatctcttccacatacattactcttgtggcctttcttaccacacttgtatcatacaatctcatctggtgcatctctcctcttgggcttcct 11638  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||  ||   |||||||||||||||||| |   ||| | || || ||||||||| |||| |||||||||||    
T  11637 atcatcacccatcttctgctttcctttgtcagcaagagcaatgtaaggcttaggacgattctgttgtcccttacc 11563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 56 - 309
Target Start/End: Original strand, 29770 - 30023
Alignment:
Q  56 ttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactct 155  Q
    ||||| || |||||||||||||||||||| |||  ||  ||||||||||||   ||||||| ||| || ||||||||||| |   |||||||||||||||    
T  29770 ttgtagcaaacaacatcaccacgcttgcactcagctattgtgtgtcctttcgtcccacaccggaaacacttcttctcatcatggttacaaacattactct 29869  T
Q  156 tgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagt 255  Q
    ||||||| || || || |||||| || | || ||||||  ||||||| |||||||  | ||||||||||||||||||||||||||||| ||||||||||     
T  29870 tgtggcccttttcaccacacttgaaatagactatctcaataggagcatctctcctcctaggcctcctctcatcattcagtctctgcttacctttgtcagc 29969  T
Q  256 agaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    ||  |||||| ||||||| |||||||||||||||||||| ||||| ||||||||    
T  29970 aggagcactagacggtttcggacgactctgctgtcccttgcctctacgctcact 30023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 177 - 309
Target Start/End: Original strand, 2195 - 2327
Alignment:
Q  177 tgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttagg 276  Q
    |||||||||| ||||||||||||||| ||||||||||  ||||||||||||||||||  || ||||||||||||||||||| |||||| |||||||||||    
T  2195 tgtaacaaactatctcagcaggagcatctctcctattccgcctcctctcatcattcaacctttgctttcctttgtcagtaggggcactgtacggtttagg 2294  T
Q  277 acgactctgctgtcccttacctcttcgctcact 309  Q
    |||||||||||||||||||||||||||||||||    
T  2295 acgactctgctgtcccttacctcttcgctcact 2327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 6 - 280
Target Start/End: Complemental strand, 5256 - 4982
Alignment:
Q  6 ccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtccttt 105  Q
    ||||||||||| | || |||| |||||||||||| || ||||||||||||||||| || ||||  || |||||||| || |||  |||||||||||||||    
T  5256 ccttcttcggctgagtacactatgaactgatatgaccttcttcgttgcagttgtagcagacaatgtctccacgcttacattcagctagggtgtgtccttt 5157  T
Q  106 ctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagct 205  Q
    ||||||||||||||| |||||| ||||||   ||  |||| ||||  | ||||||||||| ||  | | ||| |||||||| || |||||||||||| ||    
T  5156 ctgaccacacctgaaacatttcctctcatttctaccacaagcattgtttttgtggcctttttcatcactcttttaacaaacaatttcagcaggagcatct 5057  T
Q  206 ctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacga 280  Q
    ||||| ||||||||||| ||||||||||  |||||||| |||||||||| ||  ||||| || ||||||||||||    
T  5056 ctcctcttgggcctcctatcatcattcatcctctgcttccctttgtcagcaggagcactgtaaggtttaggacga 4982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 142 - 309
Target Start/End: Complemental strand, 5877 - 5710
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 241  Q
    |||||||||||||||||||||||| || || ||||||||| |||| || |||| ||||||| ||||||| ||||||||||||||||||||||||||||||    
T  5877 acaaacattactcttgtggcctttttcaccacacttgtaataaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcagtctctgc 5778  T
Q  242 tttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    || || ||||||| ||  ||||||||||| || ||| |||||||||||||||| ||||| ||||||||    
T  5777 ttacccttgtcagcaggagcactatacggcttcggatgactctgctgtcccttgcctctacgctcact 5710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 2 - 309
Target Start/End: Complemental strand, 399 - 92
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||||||  | || || || ||||| ||||| || || || |||||||| ||||| ||||  || |||||||| ||||||  ||| |||||||    
T  399 ctaaccttcttcggttgcgtacattgcgaactaatatgaccttcctcattgcagttataacaaacaatgtccccacgcttacaatcagctagtgtgtgtc 300  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
     ||||||||||||| ||||||| |||||||||||  ||  ||| ||||||||||||||||||||||| || |||||| | ||||| || |||| ||||||    
T  299 ttttctgaccacacatgaagcacttcttctcatctctatcacagacattactcttgtggcctttctcgccacacttgaagcaaacaatatcagtaggagc 200  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctctt 301  Q
      |||| || |||||||||||||||||||| |  |||||||| || ||||||| ||  ||| | ||||| || |||||||||||||||||||| |||||     
T  199 ctctctgctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagcattttacggcttcggacgactctgctgtcccttgcctctg 100  T
Q  302 cgctcact 309  Q
    || |||||    
T  99 cgttcact 92  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 59 - 309
Target Start/End: Original strand, 5848 - 6098
Alignment:
Q  59 taacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgt 158  Q
    ||||| |||||||| |||||||||||||||  ||  |||||||||||||| ||||| ||||| || ||||||| |||   |  ||| |||||||||||||    
T  5848 taacaaacaacatccccacgcttgcaatcagctaatgtgtgtcctttctgtccacatctgaaacacttcttcttatctcaatcacacacattactcttgt 5947  T
Q  159 ggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtaga 258  Q
    |||||||||| || |||||| || | ||  |||||  ||| ||| |||||||  | ||||||||||||||||||||  |||| ||||||||||||| ||     
T  5948 ggcctttctcaccacacttgaaatagacagtctcattaggggcatctctcctcctaggcctcctctcatcattcagcatctgttttcctttgtcagcagg 6047  T
Q  259 ggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
     |||||||||||||| |||||||||||||| ||||||||||| ||||||||    
T  6048 agcactatacggtttcggacgactctgctgacccttacctctgcgctcact 6098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 23 - 297
Target Start/End: Original strand, 671 - 945
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||| ||||| |||||| | ||||||||||| || ||||  || |||||||| || |||  ||   |||| || |||||||| ||||||||||    
T  671 cactgtgaacttatatgaccctctccattgcagttgtagcagacaatgtccccacgcttacattcagctaaattgtgacccttctgaccgcacctgaagc 770  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| ||||||| |||  ||||||||| |||||||||||||| || || |||||||||||||| ||||||| ||||||| ||||||| || ||||||||    
T  771 acttcctctcatctttaccacaaacattgctcttgtggcctttttcaccacacttgtaacaaacaatctcagaaggagcatctctcctcttaggcctcct 870  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     |||||| |||   ||| |||||||||||||| ||  ||||| || || ||||||||| ||||||||||||||||    
T  871 atcatcaatcaacttctactttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacc 945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 23 - 297
Target Start/End: Original strand, 41945 - 42219
Alignment:
Q  23 cactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagc 122  Q
    ||||||||||||||||| || ||  | |||||||||||||| ||||  || ||||||||||| |||  ||   |||| || |||||||||||||||||||    
T  41945 cactgtgaactgatatgaccttccccattgcagttgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagc 42044  T
Q  123 atttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcct 222  Q
    | ||| | |||||  |   ||||||||||||||||||||||||||| || |||||||| ||||| |||||| |||||||| ||||||| |||||||||||    
T  42045 acttcctatcatctcttccacaaacattactcttgtggcctttctcaccacacttgtagcaaacaatctcaacaggagcatctctcctcttgggcctcct 42144  T
Q  223 ctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     ||||||  ||   |||||||||||||||||| ||  ||||| || || ||||||||| |||| |||||||||||    
T  42145 atcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgttgtcccttacc 42219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 96 - 297
Target Start/End: Complemental strand, 824 - 623
Alignment:
Q  96 tgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagc 195  Q
    ||||||| || ||||||||||||||||| ||| |||| || |||  ||||||||| ||||||||||||||||| ||  ||||||||||||| |||||||     
T  824 tgtgtcccttttgaccacacctgaagcacttcctctcgtctttaccacaaacattgctcttgtggcctttctcaccaaacttgtaacaaacaatctcaga 725  T
Q  196 aggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctta 295  Q
    ||||||| ||||||| || |||||||| ||||||||||   ||||||||||||||||| |||  ||||| || || ||||||||| ||||||||||||||    
T  724 aggagcatctctcctcttaggcctcctatcatcattcatcttctgctttcctttgtcaataggagcactgtaaggcttaggacgattctgctgtccctta 625  T
Q  296 cc 297  Q
    ||    
T  624 cc 623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 95 - 300
Target Start/End: Complemental strand, 564 - 359
Alignment:
Q  95 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcag 194  Q
    ||||||||||||||||||||||||||||| |||||||||||  ||  ||||||| |||| |||||||||||||| || |||||| ||||||| || ||      
T  564 gtgtgtcctttctgaccacacctgaagcacttcttctcatctgtatcacaaacactacttttgtggcctttctcgccacacttgaaacaaacaatatcta 465  T
Q  195 caggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
     ||||||| ||||||| |||||||| ||||||||||| |  |||||||| || ||||||| ||  ||||||||||| || |||||||| |||||||||||    
T  464 taggagcatctctcctcttgggccttctctcatcatttaacctctgcttacccttgtcagaaggagcactatacggcttcggacgactgtgctgtccctt 365  T
Q  295 acctct 300  Q
    ||||||    
T  364 acctct 359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 65 - 309
Target Start/End: Complemental strand, 43471 - 43227
Alignment:
Q  65 acaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctt 164  Q
    |||||||| |||||||| ||||||  ||  |||||||||||||| |||||||| ||||| |||||||||||   |  ||| ||||||||||||||||| |    
T  43471 acaacatccccacgcttacaatcagctaaagtgtgtcctttctgtccacacctaaagcacttcttctcatctcgatcacacacattactcttgtggccct 43372  T
Q  165 tctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcact 264  Q
    | || |  |||||| |||| || ||||||  ||||||| ||||||| || |||||||||||||||||||| ||||| || ||||||| || ||  |||||    
T  43371 tttcacgacacttgaaacagacaatctcattaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgttagaaggagcact 43272  T
Q  265 atacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    |||| |||| ||||||||||| |||||||||||||| ||||||||    
T  43271 atacagttttggacgactctgttgtcccttacctctgcgctcact 43227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1914 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold1914
Description:

Target: scaffold1914; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 104 - 309
Target Start/End: Complemental strand, 1243 - 1038
Alignment:
Q  104 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 203  Q
    ||||| ||||| ||||| || |||||||||||||| |||||||| ||||||||||| |||||||| || |||||  | || || |||||||||| ||||     
T  1243 ttctgtccacatctgaaacacttcttctcatccttggtacaaacgttactcttgtgacctttctcgccacacttaaagcatactatctcagcagaagcac 1144  T
Q  204 ctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcg 303  Q
    |  || || | ||||||||||||||||| ||||||||||| || || ||||  | |||||||||||||||||||||| |||| |||||||||||||||||    
T  1143 ccttcttactcggcctcctctcatcattaagtctctgcttacccttatcagccggggcactatacggtttaggacgattctgatgtcccttacctcttcg 1044  T
Q  304 ctcact 309  Q
    ||||||    
T  1043 ctcact 1038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 152 - 309
Target Start/End: Complemental strand, 33337 - 33180
Alignment:
Q  152 ctcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgt 251  Q
    |||||||||||||| || || |||||| ||||||| || ||| |||||||| ||||||| ||||||||||||||||||||||  ||||| ||||||||||    
T  33337 ctcttgtggcctttttcaccacacttgaaacaaacaatttcaacaggagcatctctcctcttgggcctcctctcatcattcatcctctgttttcctttgt 33238  T
Q  252 cagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    ||| ||  ||||| || ||||||||||||||||||||||||||||| |||||||||||    
T  33237 cagcaggagcactgtatggtttaggacgactctgctgtcccttaccccttcgctcact 33180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 95 - 299
Target Start/End: Original strand, 42980 - 43184
Alignment:
Q  95 gtgtgtcctttctgaccacacctgaagcatttcttctcatccttagt-acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctca 193  Q
    |||||||||||||||| |||||| ||||| ||||||||||| |  || ||||||||||||||||||||||||||| |  |||||| ||||||  ||||||    
T  42980 gtgtgtcctttctgactacacctaaagcacttcttctcatc-tcggtcacaaacattactcttgtggcctttctcacaacacttgaaacaaattatctca 43078  T
Q  194 gcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccct 293  Q
    | ||||||| ||||||| || |||||||||||||||||||  ||||| || || ||||||| || |||||||||||| || |||||||||| ||||||||    
T  43079 gtaggagcatctctcctcttaggcctcctctcatcattcaacctctgtttacccttgtcagcaggggcactatacggcttcggacgactctactgtccct 43178  T
Q  294 tacctc 299  Q
    | ||||    
T  43179 tgcctc 43184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 2 - 254
Target Start/End: Complemental strand, 63634 - 63382
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||| ||| | || ||||| ||||||||||| || || || ||  ||||||| || |||| ||| ||| |||| ||||||  ||  |||||||    
T  63634 ctaaccttcttaggctgcgtacactgcgaactgatatgaccttcctcattatagttgtagcaaacaatatccccatgcttacaatcagctaaagtgtgtc 63535  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagt-acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    ||||||||||||||||||| || ||||||||||| |  || |||||||||||||||||||||||| || || |||||| ||||||| || |||| |||||    
T  63534 ctttctgaccacacctgaaacacttcttctcatc-tcggtcacaaacattactcttgtggcctttatcaccacacttgaaacaaacaatatcagtaggag 63436  T
Q  201 cagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcag 254  Q
    || ||||||| |||||||||||||||||||||| ||| ||||| || |||||||    
T  63435 catctctcctcttgggcctcctctcatcattcaatctttgcttacccttgtcag 63382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 62 - 309
Target Start/End: Original strand, 1970 - 2215
Alignment:
Q  62 catacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagt-acaaacattactcttgtgg 160  Q
    ||||||||||| |||||||| ||||||  ||  || ||||||||||| |||||||| ||||| ||||||||||| |  || ||| |||||||||||||||    
T  1970 catacaacatc-ccacgcttacaatcagctaaagtatgtcctttctgtccacacctaaagcacttcttctcatc-tcggtcacacacattactcttgtgg 2067  T
Q  161 cctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagagg 260  Q
    |||||||| || |||||| | ||||  || |||| ||||||| ||| ||| || |||||||||||||||||||| ||||| || |||||||||| ||| |    
T  2068 cctttctcaccacacttgaagcaaataatttcagtaggagcatctcacctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcagaag 2167  T
Q  261 cactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    ||||| ||||||| |||||||||| || |||||||||||| ||||||||    
T  2168 cacta-acggtttcggacgactctactatcccttacctctgcgctcact 2215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 125 - 309
Target Start/End: Original strand, 115936 - 116120
Alignment:
Q  125 ttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctct 224  Q
    |||||||||||  ||  |||||||||||||||||||||||| || || ||| || ||||||| || |||| ||||||| | ||||| || ||||||||||    
T  115936 ttcttctcatctctatcacaaacattactcttgtggcctttttcaccacacatgaaacaaacaatatcagtaggagcatccctcctcttaggcctcctct 116035  T
Q  225 catcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    ||||||||||||||| ||| || ||||||| ||  ||||||||||| || |||||||||||||||||||| ||||| ||||||||    
T  116036 catcattcagtctcttcttacccttgtcagcaggagcactatacggcttcggacgactctgctgtcccttgcctctacgctcact 116120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 50 - 297
Target Start/End: Complemental strand, 23990 - 23743
Alignment:
Q  50 ttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacat 149  Q
    ||||| |||||||| ||||  || ||||||||||| |||  ||   |||| || |||||||||||||||||||| ||| | |||||  |   ||| ||||    
T  23990 ttgcaattgtaacagacaatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacatacat 23891  T
Q  150 tactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttccttt 249  Q
    ||||||||||||||||||| || |||||||| ||||| |||||| |||||||| ||||||| ||||||||||| ||||||  ||   |||||||||||||    
T  23890 tactcttgtggcctttctcaccacacttgtatcaaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttccttt 23791  T
Q  250 gtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
    ||||| ||  ||||| || || |||||||||||||| |||||||||||    
T  23790 gtcagcaggagcactgtaaggcttaggacgactctgttgtcccttacc 23743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 297
Target Start/End: Complemental strand, 30437 - 30146
Alignment:
Q  6 ccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtccttt 105  Q
    ||||||||||| | || ||||  ||||||||||| || ||||| ||||||||||| |||||||  || |||  ||| || |||  |||  ||||||||||    
T  30437 ccttcttcggctgagtacacttcgaactgatatgaccttcttctttgcagttgtagcatacaatgtccccattcttacattcagctagtttgtgtccttt 30338  T
Q  106 ctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagct 205  Q
    || ||||||||| || |||||| ||| |||  ||  |||| |||| |||||||||||||| || || ||||| |||||||| ||||||||||||||| ||    
T  30337 cttaccacacctaaaacatttcctcttatctctaccacaagcattgctcttgtggcctttttcaccacacttataacaaacaatctcagcaggagcatct 30238  T
Q  206 ctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
     |||| ||||||||||| ||||||||||   |||| || |||||||||| ||  ||||| || |||||||||||| |||| | |||||||||    
T  30237 ttcctcttgggcctcctgtcatcattcatcttctgtttccctttgtcagcaggagcactgtaaggtttaggacgattctgttatcccttacc 30146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 116 - 294
Target Start/End: Complemental strand, 1305 - 1127
Alignment:
Q  116 ctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgg 215  Q
    |||||||| ||| |||||||  ||  ||||||||| ||||||||||||||||| || |||||||||||||| ||||||||||||||| ||||||| ||||    
T  1305 ctgaagcacttcctctcatctctaccacaaacattgctcttgtggcctttctcaccacacttgtaacaaacaatctcagcaggagcatctctcctcttgg 1206  T
Q  216 gcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    | ||||| ||||||||||   |||||||||||||||||| ||  ||||| || || ||||||||| ||| |||||||||    
T  1205 gtctcctatcatcattcatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattcttctgtccctt 1127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 10 - 297
Target Start/End: Original strand, 251816 - 252103
Alignment:
Q  10 cttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctga 109  Q
    ||||||| | || ||||||||||||||||| || |||||||||||||| || || ||||  || |||||||| || |||  ||| |||||||||||||||    
T  251816 cttcggctgagtacactgtgaactgatatgaccttcttcgttgcagttttagcaaacaatgtctccacgcttacattcagctagtgtgtgtcctttctga 251915  T
Q  110 ccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcc 209  Q
    |||||||| || |||||| |||||||  ||  |||| |||  || ||||||||||| || || |||||| |||| || |||||| || ||||| ||||||    
T  251916 ccacacctaaaacatttcctctcatctctaccacaagcatagcttttgtggcctttttcaccacacttgaaacacacaatctcaacaagagcatctctcc 252015  T
Q  210 tattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
    | ||||||||||| ||||||||||   | || |||||| || ||| ||  ||||| || |||||||||||| | || |||||||||||    
T  252016 tcttgggcctcctatcatcattcatcttatgttttcctgtggcagcaggagcactgtaaggtttaggacgattatgttgtcccttacc 252103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 288
Target Start/End: Complemental strand, 229827 - 229681
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 241  Q
    ||||||||| ||||||||||||||||| || || ||| ||||||| ||||| ||||||||| |  || |||| |||| ||| |||||   || ||||||     
T  229827 acaaacattgctcttgtggcctttctcaccacaattgaaacaaacaatctccgcaggagcatccttcttattaggccgcctatcatcgaccattctctgt 229728  T
Q  242 tttcctttgtcagtagaggcactatacggtttaggacgactctgctg 288  Q
    || || || |||| || ||||||||| || ||||| |||||||||||    
T  229727 ttgcccttatcagcaggggcactatagggcttagggcgactctgctg 229681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 74; Significance: 6e-34; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 21 - 309
Target Start/End: Complemental strand, 12508 - 12222
Alignment:
Q  21 ttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaa 120  Q
    ||||||| ||||||||||| || || || |||||||| ||||| ||||  || |||||||| ||||||  ||  ||||||||||||||| ||||||| ||    
T  12508 ttcactgcgaactgatatgaccttcctcattgcagttataacaaacaatgtccccacgcttacaatcatctaatgtgtgtcctttctgagcacacctaaa 12409  T
Q  121 gcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctc 220  Q
    ||| ||||||||||| |||  | ||||||||||||||||||||||||| || |||||| | ||| |  |||    |    || ||||||| ||||||||     
T  12408 gcacttcttctcatctttacgaaaaacattactcttgtggcctttctcgccacacttgaagcaatc--tctacttaccctcatctctcctcttgggccta 12311  T
Q  221 ctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    ||||||||||||||||||||||| || ||||||| ||  ||||| ||||| || |||||||| |||| |||||| ||||| || |||||    
T  12310 ctctcatcattcagtctctgcttacccttgtcagcaggagcactgtacggcttcggacgactatgctatcccttgcctctacgatcact 12222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 21 - 309
Target Start/End: Complemental strand, 20688 - 20402
Alignment:
Q  21 ttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaa 120  Q
    ||||||| ||||||||||| || || || |||||||| ||||| ||||  || |||||||| ||||||  ||  ||||||||||||||| ||||||| ||    
T  20688 ttcactgcgaactgatatgaccttcctcattgcagttataacaaacaatgtccccacgcttacaatcatctaatgtgtgtcctttctgagcacacctaaa 20589  T
Q  121 gcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctc 220  Q
    ||| ||||||||||| |||  | ||||||||||||||||||||||||| || |||||| | ||| |  |||    |    || ||||||| ||||||||     
T  20588 gcacttcttctcatctttacgaaaaacattactcttgtggcctttctcgccacacttgaagcaatc--tctacttaccctcatctctcctcttgggccta 20491  T
Q  221 ctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    ||||||||||||||||||||||| || ||||||| ||  ||||| ||||| || |||||||| |||| |||||| ||||| || |||||    
T  20490 ctctcatcattcagtctctgcttacccttgtcagcaggagcactgtacggcttcggacgactatgctatcccttgcctctacgatcact 20402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 246
Target Start/End: Original strand, 115751 - 115995
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||||||  | || ||||| ||||||||||| |||||  | ||||| || || ||||| | |||||||||||||||||||  ||    ||| |    
T  115751 ctaaccttcttcggttgagtgcactgagaactgatatgaccctccccattgcaattatagcatactatatcaccacgcttgcaatcagctaacacgtgac 115850  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagc 201  Q
    | ||||| |||||||||||||| ||||||||||| || |||||||||||||| |||||||||||||| || |||||  | ||||| || ||||||||||     
T  115851 ccttctgtccacacctgaagcacttcttctcatctttggtacaaacattacttttgtggcctttctcgccacacttaaagcaaactatttcagcaggagt 115950  T
Q  202 agctctcctattgggcctcctctcatcattcagtctctgctttcc 246  Q
      |||| |  |||||||| ||||||||||||||||  ||||||||    
T  115951 gtctcttcccttgggccttctctcatcattcagtcgttgctttcc 115995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 101 - 202
Target Start/End: Complemental strand, 93910 - 93809
Alignment:
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggag 200  Q
    ||||||||||| || ||||| |||||||||||||| | ||| ||| |||||||||||||||| ||| | || || ||||||||||| | |||| ||||||    
T  93910 cctttctgaccgcatctgaaacatttcttctcatcttgagtgcaagcattactcttgtggcccttcacaccacatttgtaacaaacaacctcaacaggag 93811  T
Q  201 ca 202  Q
    ||    
T  93810 ca 93809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 146 - 309
Target Start/End: Complemental strand, 1243 - 1080
Alignment:
Q  146 acattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttc 245  Q
    ||||||| |||||||||||| || || || ||  |||| || |||| || ||||||| |||||||  | ||||||||||||||||||||||||||||| |    
T  1243 acattacccttgtggcctttttcaccacatttaaaacagacaatcttagtaggagcatctctcctcctaggcctcctctcatcattcagtctctgcttac 1144  T
Q  246 ctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    | ||||||  ||  |||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  1143 ccttgtcaacaggagcactatacggtttcggacgactctgctgtcccttacctctgcgctcact 1080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 146 - 309
Target Start/End: Complemental strand, 28256 - 28093
Alignment:
Q  146 acattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttc 245  Q
    ||||||| |||||||||||| || || || ||  |||| || |||| || ||||||| |||||||  | ||||||||||||||||||||||||||||| |    
T  28256 acattacccttgtggcctttttcaccacatttaaaacagacaatcttagtaggagcatctctcctcctaggcctcctctcatcattcagtctctgcttac 28157  T
Q  246 ctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    | ||||||  ||  |||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  28156 ccttgtcaacaggagcactatacggtttcggacgactctgctgtcccttacctctgcgctcact 28093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 163 - 309
Target Start/End: Original strand, 3215 - 3361
Alignment:
Q  163 tttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggca 262  Q
    |||||| || |||||| | ||||  ||||||| ||||||| ||||||| |||||||||||||||||||||| ||||||||| || ||||||| || ||||    
T  3215 tttctccccacacttgaagcaaataatctcagtaggagcatctctcctcttgggcctcctctcatcattcaatctctgcttacccttgtcagcaggggca 3314  T
Q  263 ctatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    |||||||| || ||||||||||| |||||||| ||||| ||||||||    
T  3315 ctatacggcttcggacgactctgttgtcccttgcctctgcgctcact 3361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 29 - 294
Target Start/End: Complemental strand, 67196 - 66931
Alignment:
Q  29 gaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttct 128  Q
    ||||| ||||| || ||| | ||||||||||| || ||||  || ||| |||| || |||  |||| ||||||| || |||||||||||||| ||||||     
T  67196 gaactaatatgaccttctccattgcagttgtagcagacaatgtccccaagcttacattcagctaggttgtgtcccttttgaccacacctgaaacatttcc 67097  T
Q  129 tctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatc 228  Q
    ||||||   ||  ||||||||| |||||||||||||| || || ||||| |||||||| ||||| | ||||||| ||||||| ||||| ||||| |||||    
T  67096 tctcatgtctaccacaaacattgctcttgtggcctttttcaccacacttataacaaacaatctcggaaggagcatctctcctcttgggtctcctatcatc 66997  T
Q  229 attcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    |||||   ||| |||||||||||||  ||  ||||| || || ||||||||| |||||||||||||    
T  66996 attcatcatctactttcctttgtcaacaggagcactgtaaggcttaggacgattctgctgtccctt 66931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 30122 - 30312
Alignment:
Q  1 tctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgt 100  Q
    ||||||||||||||||   |  ||||| ||||||||||| |||||| | |||||||||||||| ||||  || |||||||| || |||  |||| |||||    
T  30122 tctaaccttcttcggctcaggacactgcgaactgatatgaccctctccattgcagttgtaacagacaatgtccccacgcttacattcagctaggttgtgt 30221  T
Q  101 cctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatct 191  Q
    | |||||||||||||||||| || ||| |||||||  ||  |||||| || || |||||||||||||| || |||||||||||||| ||||    
T  30222 cttttctgaccacacctgaatcacttcctctcatctctaccacaaacgttgcttttgtggcctttctcaccacacttgtaacaaacaatct 30312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 30334 - 30391
Alignment:
Q  237 tctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    |||||||||||||||||| ||  ||||| || || |||||||||||||||||||||||    
T  30334 tctgctttcctttgtcagcaggagcactgtaaggcttaggacgactctgctgtccctt 30391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 204 - 309
Target Start/End: Complemental strand, 773 - 668
Alignment:
Q  204 ctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcg 303  Q
    ||||||| || |||||||||||||||||||||||||  || |||||||||| ||  ||||| |||||||| |||||||||||||||||||||||||| |     
T  773 ctctcctcttaggcctcctctcatcattcagtctctatttacctttgtcagcaggagcactgtacggtttcggacgactctgctgtcccttacctctaca 674  T
Q  304 ctcact 309  Q
    ||||||    
T  673 ctcact 668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 167
Target Start/End: Original strand, 12916 - 13081
Alignment:
Q  2 ctaaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtc 101  Q
    ||||||||||| ||| | || ||||| ||||||||||| || ||||| || |||||||| || |||||||| |||||||| ||||||  ||  |||||||    
T  12916 ctaaccttcttaggctgcgtacactgcgaactgatatgaccttcttcattacagttgtagcaaacaacatccccacgcttacaatcagctaaagtgtgtc 13015  T
Q  102 ctttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttct 167  Q
    |||||||||||||||| ||||| |||||||| ||      ||| ||||||||||||||||||||||    
T  13016 ctttctgaccacacctaaagcacttcttctcgtcacggtcacatacattactcttgtggcctttct 13081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 142 - 309
Target Start/End: Complemental strand, 16584 - 16417
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 241  Q
    |||| |||||||||||||||| ||||| || |||||||| ||||| | ||||||||||| | || || |  | |||||||||||||||||||  || |||    
T  16584 acaagcattactcttgtggcccttctcaccacacttgtagcaaacaacctcagcaggagtatctttctttctaggcctcctctcatcattcaccctttgc 16485  T
Q  242 tttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacctcttcgctcact 309  Q
    || ||||| |||| ||  |||||||| || || |||||||||||||| | |||||| || ||||||||    
T  16484 ttacctttatcagcaggagcactataaggctttggacgactctgctgactcttacccctccgctcact 16417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 248
Target Start/End: Original strand, 1269 - 1374
Alignment:
Q  143 caaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgct 242  Q
    |||||||||||||||||||| ||||| || |||||||||||||| ||||||| |||| || | || || || || |||||||||||||||| ||||||||    
T  1269 caaacattactcttgtggcccttctcaccacacttgtaacaaacaatctcagtaggaacatcccttctcttaggtctcctctcatcattcaatctctgct 1368  T
Q  243 ttcctt 248  Q
     |||||    
T  1369 ctcctt 1374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 253
Target Start/End: Original strand, 7908 - 7997
Alignment:
Q  164 ttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtca 253  Q
    ||||| || |||||||||||||| ||||||| |||| || | || || || || |||||||||||||||| |||||||| ||||||||||    
T  7908 ttctcaccacacttgtaacaaacaatctcagtaggaacatcccttctcttaggtctcctctcatcattcaatctctgctctcctttgtca 7997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 191 - 290
Target Start/End: Original strand, 12322 - 12421
Alignment:
Q  191 tcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtc 290  Q
    |||| ||||||| ||||||| |  |||||||||||||||||||| ||||| ||  ||||||||| ||  |||||||||| ||| ||||||||||||||||    
T  12322 tcagtaggagcatctctcctctaaggcctcctctcatcattcagcctctgtttatctttgtcagcaggagcactatacgatttcggacgactctgctgtc 12421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 135
Target Start/End: Original strand, 12151 - 12282
Alignment:
Q  4 aaccttcttcggccgtgttcactgtgaactgatatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcct 103  Q
    ||||||||| ||| | || ||||||||||| ||||| || ||||| || |||||||| || |||| ||| |||| ||||||||||   |  |||||||||    
T  12151 aaccttcttaggctgcgtacactgtgaactaatatgtccttcttcattacagttgtagcaaacaatatccccacacttgcaatcagccaatgtgtgtcct 12250  T
Q  104 ttctgaccacacctgaagcatttcttctcatc 135  Q
    ||||| ||||| ||||| || |||||||||||    
T  12251 ttctgtccacatctgaaacacttcttctcatc 12282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 281
Target Start/End: Complemental strand, 3863 - 3728
Alignment:
Q  146 acattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttc 245  Q
    |||||||||||||||||  |||| || |||||||| ||||| |||||| ||| | || ||||||| || || |||||||||||||||| ||| || || |    
T  3863 acattactcttgtggcccctctcgccacacttgtagcaaacaatctcaacagaaacatctctcctcttaggtctcctctcatcattcaatctttgtttcc 3764  T
Q  246 ctttgtcagtagaggcactatacggtttaggacgac 281  Q
    | ||||||| ||  |||||||| || ||||||||||    
T  3763 ccttgtcagcaggagcactatagggcttaggacgac 3728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 192
Target Start/End: Original strand, 12034 - 12176
Alignment:
Q  50 ttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcatccttagtacaaacat 149  Q
    |||||||||||||| | ||  || ||||||||||| |||  ||   |||| || |||||||||||||||||||| ||| | |||||  |   ||||||||    
T  12034 ttgcagttgtaacagataatgtccccacgcttgcattcagctaaactgtgacccttctgaccacacctgaagcacttcctatcatctcttccacaaacat 12133  T
Q  150 tactcttgtggcctttctctcctcacttgtaacaaacgatctc 192  Q
    ||||||||||||||||||| || |||||||| ||||| |||||    
T  12134 tactcttgtggcctttctcaccacacttgtagcaaacaatctc 12176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 295
Target Start/End: Original strand, 36720 - 36980
Alignment:
Q  35 atatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcat 134  Q
    ||||| |||||||| ||||| ||  | || |||| ||||| |||||||||||||  ||  || || || ||||  ||||||| ||| ||||||||| | |    
T  36720 atatgaccctcttccttgcaattaaagcacacaatatcactacgcttgcaatcagctaacgtatgacccttcttgccacaccggaaacatttcttcacct 36819  T
Q  135 ccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcag 234  Q
    |||  | ||||||||| ||||||||||||||||| || || ||| |||| |||||||| ||||||||| |  || | || |||| ||| |||||   ||     
T  36820 cctctggacaaacattgctcttgtggcctttctcaccacaattgaaacagacgatctccgcaggagcatccttcttcttaggccgcctatcatcgaccat 36919  T
Q  235 tctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctta 295  Q
    |||||| || || || |||| || ||||||||| || |||||  |||||||||| ||||||    
T  36920 tctctgtttgcccttatcagcaggggcactatagggcttagggagactctgctggccctta 36980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 147 - 233
Target Start/End: Complemental strand, 30983 - 30897
Alignment:
Q  147 cattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattca 233  Q
    |||||||||||||||| ||||| || |||||||| ||||| |||||||||||| || |||| || || |  ||||||||||||||||    
T  30983 cattactcttgtggcccttctcaccacacttgtagcaaacaatctcagcaggaacatctcttctcttagttctcctctcatcattca 30897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 168
Target Start/End: Complemental strand, 29010 - 28877
Alignment:
Q  35 atatggccctcttcgttgcagttgtaacatacaacatcaccacgcttgcaatcaaatagggtgtgtcctttctgaccacacctgaagcatttcttctcat 134  Q
    ||||| |||||| | ||||||||| ||||  ||| ||||||| ||||||| |||  ||  ||||| || ||||  ||||||| ||| ||||||||  | |    
T  29010 atatgaccctctactttgcagttgaaacacgcaatatcaccatgcttgcattcagctaatgtgtgacccttcttgccacaccggaaacatttctttacct 28911  T
Q  135 ccttagtacaaacattactcttgtggcctttctc 168  Q
    |||||| ||||||||| |||||||||||||||||    
T  28910 ccttaggacaaacattgctcttgtggcctttctc 28877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 148 - 288
Target Start/End: Original strand, 104561 - 104701
Alignment:
Q  148 attactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgctttcct 247  Q
    ||||||||||||||||||||| || ||  | || ||||| |||||| |||||||| || || |  | |||| |||||||||| ||| |||||| |||||     
T  104561 attactcttgtggcctttctcaccacaagtatagcaaacaatctcaacaggagcatctttctttctaggccgcctctcatcaatcattctctgttttccc 104660  T
Q  248 ttgtcagtagaggcactatacggtttaggacgactctgctg 288  Q
    || |||| ||  |||||||| || || ||||||||||||||    
T  104661 ttatcagcaggagcactataaggctttggacgactctgctg 104701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 295
Target Start/End: Original strand, 99 - 270
Alignment:
Q  124 tttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctc 223  Q
    ||||||| | |||| || ||||||||| ||||||||||||||||| || || ||| |||| || ||||| ||||||||| |  || | || |||| |||     
T  99 tttcttcacctcctcaggacaaacattgctcttgtggcctttctcaccacaattgaaacagacaatctctgcaggagcatccttcttcttaggccgccta 198  T
Q  224 tcatcattcagtctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctta 295  Q
    |||||   || |||||| ||||| || |||| || ||||||||| || ||||| ||||||||| | ||||||    
T  199 tcatcgaccattctctgttttcccttatcagcaggggcactatagggcttagggcgactctgccggccctta 270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 49084 - 49143
Alignment:
Q  235 tctctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    |||||| || ||||| ||||||| |||| | |||||||||||||||||||||||||||||    
T  49084 tctctgtttccctttatcagtaggggcattgtacggtttaggacgactctgctgtccctt 49143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 288
Target Start/End: Original strand, 208 - 354
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 241  Q
    ||||||||||||||||||||||||| | || || ||| ||||||| || || ||||||||| |  || | || ||| |||| |||||   || |||||||    
T  208 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatccttcttctttggcttcctatcatcgaccattctctgc 307  T
Q  242 tttcctttgtcagtagaggcactatacggtttaggacgactctgctg 288  Q
    || || || || | || ||||||||| |||||||| |||||||||||    
T  308 ttgcccttatctgcaggggcactataaggtttagggcgactctgctg 354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 288
Target Start/End: Complemental strand, 13099 - 12953
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 241  Q
    ||||||||||||||||||||||||| | || || ||| ||||||| || || ||||||||| |  || | || ||| |||| |||||   || |||||||    
T  13099 acaaacattactcttgtggcctttcccgccacagttgaaacaaacaatatccgcaggagcatccttcttctttggcttcctatcatcgaccattctctgc 13000  T
Q  242 tttcctttgtcagtagaggcactatacggtttaggacgactctgctg 288  Q
    || || || || | || ||||||||| |||||||| |||||||||||    
T  12999 ttgcccttatctgcaggggcactataaggtttagggcgactctgctg 12953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 1571 - 1724
Alignment:
Q  104 ttctgaccacacctgaagcatttcttctcatccttagtacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcag 203  Q
    |||||||| || ||||| |||||||||||||| |  || ||| |||||||||||||||| ||  | || || ||||||||||| |  ||| ||||||||     
T  1571 ttctgaccgcatctgaaacatttcttctcatcttgggtgcaagcattactcttgtggcccttaacaccacatttgtaacaaacaacatcaacaggagcat 1670  T
Q  204 ctctcctattgggcctcctctcatcattcagtctctgctttcctttgtcagtag 257  Q
     |||||  || |||  |||||||||||||| ||| || || ||||||| |||||    
T  1671 ttctccccttaggctgcctctcatcattcaatctttgtttgcctttgttagtag 1724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 230
Target Start/End: Original strand, 36156 - 36245
Alignment:
Q  141 tacaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcat 230  Q
    |||| ||||||||||||||||||||||| || ||| |||| ||||| |||| || ||| ||| |||| || || || |||||||||||||    
T  36156 tacagacattactcttgtggcctttctcaccacacctgtagcaaacaatcttagtaggggcatctcttctcttaggtctcctctcatcat 36245  T

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Target: scaffold0044 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 142 - 295
Target Start/End: Original strand, 17489 - 17642
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 241  Q
    ||||||||||||||||||||||||||| || || ||| |||| || ||||| ||||||||| |  || | || |||| ||| |||||   || ||| ||     
T  17489 acaaacattactcttgtggcctttctcaccacaattgaaacagacaatctccgcaggagcatccttcttcttaggccgcctatcatcgaccattctatgt 17588  T
Q  242 tttcctttgtcagtagaggcactatacggtttaggacgactctgctgtccctta 295  Q
    || || || |||| || ||||||||| || ||||| ||||||||||| ||||||    
T  17589 ttgcccttatcagcaggggcactatagggcttagggcgactctgctggccctta 17642  T

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Target: scaffold0457 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 237 - 297
Target Start/End: Complemental strand, 13934 - 13874
Alignment:
Q  237 tctgctttcctttgtcagtagaggcactatacggtttaggacgactctgctgtcccttacc 297  Q
    |||||||||||||||||| ||  ||||| || || ||||||||| ||||||||||||||||    
T  13934 tctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacc 13874  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 184
Target Start/End: Original strand, 171447 - 171489
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaa 184  Q
    ||||||||||||||||||||||||||| || || |||||||||    
T  171447 acaaacattactcttgtggcctttctcaccacaattgtaacaa 171489  T

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Target: scaffold2059 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold2059
Description:

Target: scaffold2059; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 287
Target Start/End: Complemental strand, 744 - 599
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 241  Q
    ||||||||||||||||||| ||||||| || || ||| |||||   |||||||| |||||| | ||| | || |||| ||| |||||   || ||||||     
T  744 acaaacattactcttgtggtctttctcaccacaattgaaacaagtaatctcagctggagcatccctcttcttaggccgcctatcatcgaccattctctgt 645  T
Q  242 tttcctttgtcagtagaggcactatacggtttaggacgactctgct 287  Q
    || || || |||| || ||||||||| || ||||| ||||||||||    
T  644 ttgcccttatcagcaggggcactataaggcttagggcgactctgct 599  T

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Target: scaffold0431 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 10797 - 10846
Alignment:
Q  245 cctttgtcagtagaggcactatacggtttaggacgactctgctgtccctt 294  Q
    ||||| |||| || |||||| ||||| |||||||||||||||||||||||    
T  10797 cctttatcagcaggggcactgtacggcttaggacgactctgctgtccctt 10846  T

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Target: scaffold0270 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 7202 - 7303
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 241  Q
    |||| |||||||||| ||||||||||| || ||  | || ||||| |||||| |||||||| || || |  | ||||||||||||||||||| ||| |||    
T  7202 acaagcattactcttatggcctttctcaccacaagtatagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgc 7301  T
Q  242 tt 243  Q
    ||    
T  7302 tt 7303  T

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Target: scaffold0270; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 14332 - 14433
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcattcagtctctgc 241  Q
    |||| |||||||||| ||||||||||| || ||  | || ||||| |||||| |||||||| || || |  | ||||||||||||||||||| ||| |||    
T  14332 acaagcattactcttatggcctttctcaccacaagtatagcaaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgc 14431  T
Q  242 tt 243  Q
    ||    
T  14432 tt 14433  T

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Target: scaffold0040 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 231
Target Start/End: Original strand, 18174 - 18263
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagcagctctcctattgggcctcctctcatcatt 231  Q
    |||| |||||||||| ||||||||||| || ||  |||| ||||| |||||||||| |||| || || |  | |||||||||||||||||    
T  18174 acaagcattactcttatggcctttctcaccacaagtgtagcaaacaatctcagcagtagcatctttctttcttggcctcctctcatcatt 18263  T

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Target: scaffold1881 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 455 - 395
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 202  Q
    ||||||||| ||||||||||||||||| || || ||| ||||||| ||||| | |||||||    
T  455 acaaacattgctcttgtggcctttctcgccacaattgaaacaaacaatctccgtaggagca 395  T

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Target: scaffold0509 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 12162 - 12214
Alignment:
Q  147 cattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcagga 199  Q
    |||||||||||||||| ||||| || |||||||| ||||| ||||||| ||||    
T  12162 cattactcttgtggcccttctcaccacacttgtagcaaacaatctcagtagga 12214  T

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Target: scaffold0285 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 202
Target Start/End: Original strand, 5327 - 5387
Alignment:
Q  142 acaaacattactcttgtggcctttctctcctcacttgtaacaaacgatctcagcaggagca 202  Q
    ||||||||||||||| ||||| ||||| || || ||| ||||||| ||||| |||||||||    
T  5327 acaaacattactcttatggcccttctcgccacagttgaaacaaacaatctccgcaggagca 5387  T

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