View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8779_low_23 (Length: 238)
Name: NF8779_low_23
Description: NF8779
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8779_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 42929832 - 42930055
Alignment:
| Q |
1 |
ttagggaggagattgattgtgaagatgaagttgaagcttcacaaactcaagcttcaacttcatcttcgtcttcaagtacttaatttaaggttgaggggaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42929832 |
ttagggaggagattgattgtgaagatgaagttgaagcttcacaaactcaagcttcaacttcatcttcgtcttcaagtacttaatttaaggttgaggggaa |
42929931 |
T |
|
| Q |
101 |
tgattttaattatgtataccaaatattagtagtagtgtatcataaagtaacattttttgtttcattatttttcatgttaatttccctcttttgcttacgt |
200 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42929932 |
tgattttaattatgtataccaaatagtagtagtagtgtatcataaagtaacattttttgtttcattatttttcatgttaatttccctcttttgcttacgt |
42930031 |
T |
|
| Q |
201 |
atttggttctttgcgctgagagat |
224 |
Q |
| |
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||||||||||||||||||| |||| |
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|
| T |
42930032 |
atttggttctttgcgctgacagat |
42930055 |
T |
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