View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8781_high_40 (Length: 239)

Name: NF8781_high_40
Description: NF8781
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8781_high_40
NF8781_high_40
[»] chr4 (43 HSPs)
chr4 (1-223)||(10169649-10169871)
chr4 (1-138)||(43771165-43771302)
chr4 (1-177)||(8108954-8109132)
chr4 (1-174)||(47009190-47009365)
chr4 (3-158)||(754586-754743)
chr4 (30-152)||(5044573-5044695)
chr4 (4-174)||(39471158-39471330)
chr4 (4-144)||(722190-722330)
chr4 (1-177)||(24834576-24834754)
chr4 (4-134)||(22542424-22542554)
chr4 (1-174)||(26361312-26361479)
chr4 (30-147)||(29699519-29699635)
chr4 (40-144)||(49242203-49242307)
chr4 (39-174)||(20225383-20225518)
chr4 (30-174)||(33653522-33653668)
chr4 (28-119)||(46536293-46536384)
chr4 (37-142)||(48339380-48339485)
chr4 (41-174)||(49077250-49077385)
chr4 (30-166)||(34129433-34129571)
chr4 (36-139)||(50481584-50481687)
chr4 (53-175)||(46242000-46242122)
chr4 (1-158)||(20454557-20454714)
chr4 (73-178)||(33996011-33996118)
chr4 (38-174)||(24938456-24938588)
chr4 (31-128)||(31250917-31251014)
chr4 (104-174)||(40991696-40991768)
chr4 (45-146)||(46287472-46287573)
chr4 (30-141)||(25719145-25719257)
chr4 (1-128)||(38537517-38537647)
chr4 (36-144)||(50164428-50164536)
chr4 (29-141)||(50652368-50652479)
chr4 (1-127)||(45310952-45311078)
chr4 (94-180)||(47237838-47237926)
chr4 (104-177)||(39016661-39016736)
chr4 (4-64)||(45081749-45081809)
chr4 (30-151)||(37451046-37451165)
chr4 (28-138)||(52671869-52671979)
chr4 (1-70)||(40991593-40991662)
chr4 (1-154)||(49682795-49682950)
chr4 (1-86)||(52279263-52279348)
chr4 (1-128)||(18421835-18421960)
chr4 (72-144)||(19470739-19470811)
chr4 (4-139)||(38636375-38636508)
[»] chr1 (41 HSPs)
chr1 (1-174)||(26980266-26980441)
chr1 (1-174)||(6133629-6133803)
chr1 (25-174)||(41958086-41958235)
chr1 (1-174)||(931375-931550)
chr1 (1-139)||(32211788-32211926)
chr1 (33-139)||(39499433-39499538)
chr1 (5-174)||(2225227-2225396)
chr1 (8-174)||(19101612-19101780)
chr1 (1-170)||(11987631-11987802)
chr1 (36-146)||(41948185-41948295)
chr1 (1-137)||(30678915-30679051)
chr1 (1-128)||(8741227-8741354)
chr1 (1-177)||(8899012-8899190)
chr1 (43-174)||(22540369-22540502)
chr1 (46-142)||(49730899-49730995)
chr1 (30-170)||(33193055-33193197)
chr1 (1-160)||(51732294-51732452)
chr1 (39-174)||(3872676-3872812)
chr1 (43-174)||(15523211-15523344)
chr1 (43-174)||(15531205-15531338)
chr1 (30-136)||(28218081-28218187)
chr1 (30-144)||(29673508-29673622)
chr1 (37-166)||(10659808-10659940)
chr1 (40-173)||(35336868-35336997)
chr1 (90-174)||(25543341-25543427)
chr1 (4-63)||(39974207-39974266)
chr1 (94-172)||(4578674-4578752)
chr1 (68-144)||(50773182-50773258)
chr1 (1-70)||(16948533-16948602)
chr1 (8-128)||(37552962-37553080)
chr1 (112-174)||(39039470-39039534)
chr1 (1-166)||(27570234-27570401)
chr1 (77-141)||(50539160-50539224)
chr1 (37-177)||(31074714-31074855)
chr1 (74-174)||(32848660-32848762)
chr1 (94-144)||(5602657-5602707)
chr1 (94-144)||(13114767-13114817)
chr1 (94-157)||(44760691-44760756)
chr1 (39-144)||(37525562-37525667)
chr1 (51-128)||(46335146-46335223)
chr1 (30-98)||(27794233-27794301)
[»] chr6 (22 HSPs)
chr6 (1-177)||(34905334-34905512)
chr6 (1-165)||(1392640-1392803)
chr6 (4-165)||(5106308-5106471)
chr6 (30-174)||(445819-445965)
chr6 (5-128)||(32112725-32112848)
chr6 (33-177)||(32122793-32122939)
chr6 (28-165)||(10133189-10133328)
chr6 (1-174)||(21987293-21987468)
chr6 (1-128)||(16851977-16852104)
chr6 (14-128)||(12784956-12785070)
chr6 (14-117)||(12780776-12780879)
chr6 (30-166)||(31116157-31116295)
chr6 (1-175)||(32598952-32599125)
chr6 (1-101)||(16187438-16187536)
chr6 (1-101)||(16187656-16187754)
chr6 (30-142)||(2675930-2676042)
chr6 (74-147)||(31443989-31444062)
chr6 (89-174)||(6109872-6109959)
chr6 (5-97)||(8441857-8441949)
chr6 (5-97)||(8450661-8450753)
chr6 (1-57)||(16436184-16436240)
chr6 (36-72)||(34882269-34882305)
[»] chr3 (42 HSPs)
chr3 (1-174)||(37776707-37776882)
chr3 (4-174)||(28529254-28529424)
chr3 (4-174)||(20493452-20493624)
chr3 (1-166)||(41451899-41452066)
chr3 (1-166)||(24734714-24734881)
chr3 (30-174)||(46160950-46161094)
chr3 (1-139)||(14236057-14236195)
chr3 (16-141)||(18427169-18427294)
chr3 (30-174)||(46450068-46450213)
chr3 (1-174)||(20791297-20791472)
chr3 (1-138)||(8824983-8825120)
chr3 (73-174)||(30624634-30624735)
chr3 (40-174)||(48351437-48351573)
chr3 (1-174)||(5452066-5452239)
chr3 (36-133)||(29588772-29588869)
chr3 (1-144)||(27243078-27243222)
chr3 (41-174)||(29755501-29755636)
chr3 (1-125)||(52123960-52124084)
chr3 (36-142)||(22604595-22604701)
chr3 (46-164)||(26310495-26310615)
chr3 (1-174)||(15790374-15790548)
chr3 (44-128)||(41607460-41607544)
chr3 (48-144)||(41707490-41707586)
chr3 (1-128)||(2419468-2419595)
chr3 (14-144)||(38414680-38414810)
chr3 (5-144)||(43016444-43016585)
chr3 (28-165)||(10948591-10948730)
chr3 (44-128)||(19345047-19345131)
chr3 (8-177)||(40715873-40716044)
chr3 (73-174)||(46575949-46576052)
chr3 (14-166)||(50156677-50156829)
chr3 (19-156)||(138784-138921)
chr3 (44-125)||(49072057-49072138)
chr3 (30-166)||(55452048-55452184)
chr3 (28-71)||(38138613-38138656)
chr3 (74-174)||(45515572-45515674)
chr3 (2-57)||(49418424-49418479)
chr3 (111-175)||(55283171-55283237)
chr3 (74-144)||(43657073-43657143)
chr3 (111-144)||(24748940-24748973)
chr3 (79-136)||(46237128-46237185)
chr3 (111-147)||(33164944-33164980)
[»] chr2 (39 HSPs)
chr2 (3-178)||(6980126-6980303)
chr2 (1-144)||(9470114-9470256)
chr2 (1-174)||(26767765-26767940)
chr2 (30-174)||(11539424-11539573)
chr2 (1-139)||(32856139-32856277)
chr2 (1-174)||(12989192-12989367)
chr2 (1-174)||(38464164-38464339)
chr2 (36-144)||(44274267-44274375)
chr2 (4-174)||(45554568-45554732)
chr2 (28-98)||(472194-472264)
chr2 (1-141)||(34142143-34142283)
chr2 (42-141)||(15884469-15884564)
chr2 (30-174)||(19639094-19639240)
chr2 (30-174)||(19837687-19837833)
chr2 (44-166)||(17188076-17188198)
chr2 (30-165)||(36471871-36472008)
chr2 (38-175)||(7919311-7919448)
chr2 (1-144)||(1110231-1110375)
chr2 (30-174)||(10981519-10981665)
chr2 (30-128)||(43414404-43414502)
chr2 (73-174)||(2476537-2476638)
chr2 (116-172)||(31494211-31494267)
chr2 (74-174)||(18511286-18511388)
chr2 (111-174)||(19427361-19427424)
chr2 (1-128)||(30849286-30849412)
chr2 (67-174)||(41546098-41546206)
chr2 (104-174)||(3804585-3804657)
chr2 (1-70)||(4552844-4552913)
chr2 (45-175)||(16719478-16719610)
chr2 (5-177)||(35316409-35316581)
chr2 (89-147)||(8009543-8009601)
chr2 (15-166)||(37652263-37652416)
chr2 (111-174)||(37719835-37719900)
chr2 (107-141)||(42579767-42579801)
chr2 (105-138)||(4602975-4603008)
chr2 (74-147)||(15508944-15509017)
chr2 (104-169)||(25666700-25666767)
chr2 (1-57)||(25730443-25730499)
chr2 (94-142)||(41805873-41805921)
[»] chr7 (36 HSPs)
chr7 (1-171)||(27949277-27949449)
chr7 (3-174)||(32205080-32205250)
chr7 (37-174)||(31502504-31502643)
chr7 (1-128)||(25686839-25686966)
chr7 (4-174)||(22189940-22190112)
chr7 (1-174)||(46517294-46517467)
chr7 (4-165)||(7775010-7775172)
chr7 (1-174)||(27888283-27888458)
chr7 (1-174)||(32212874-32213048)
chr7 (4-177)||(39254081-39254256)
chr7 (42-166)||(36845567-36845692)
chr7 (1-138)||(7459382-7459519)
chr7 (1-136)||(11692220-11692355)
chr7 (44-174)||(25092708-25092840)
chr7 (2-174)||(33008105-33008276)
chr7 (4-115)||(6580009-6580120)
chr7 (4-144)||(11824104-11824242)
chr7 (1-174)||(6442166-6442341)
chr7 (36-174)||(14795132-14795272)
chr7 (36-174)||(15242124-15242264)
chr7 (76-165)||(8073367-8073458)
chr7 (75-171)||(44511014-44511112)
chr7 (30-135)||(12263469-12263574)
chr7 (4-158)||(44350809-44350965)
chr7 (1-174)||(48374443-48374616)
chr7 (1-144)||(24539126-24539270)
chr7 (74-144)||(17354604-17354674)
chr7 (94-144)||(17749727-17749777)
chr7 (30-142)||(28713051-28713156)
chr7 (36-162)||(32178843-32178968)
chr7 (1-70)||(36845495-36845564)
chr7 (111-174)||(27320226-27320291)
chr7 (104-166)||(19422941-19423005)
chr7 (115-147)||(557496-557528)
chr7 (38-118)||(23564076-23564156)
chr7 (104-156)||(31874052-31874104)
[»] chr8 (29 HSPs)
chr8 (1-160)||(34861196-34861350)
chr8 (40-178)||(32072094-32072234)
chr8 (30-174)||(28413902-28414048)
chr8 (5-174)||(1977181-1977352)
chr8 (4-144)||(36804846-36804986)
chr8 (30-128)||(17499266-17499364)
chr8 (4-128)||(8903901-8904025)
chr8 (1-174)||(16983395-16983570)
chr8 (1-177)||(9952762-9952939)
chr8 (36-166)||(24055964-24056096)
chr8 (37-144)||(8914804-8914911)
chr8 (31-174)||(31301116-31301260)
chr8 (1-134)||(35151733-35151866)
chr8 (30-174)||(43506539-43506682)
chr8 (30-174)||(14236339-14236485)
chr8 (4-166)||(4674920-4675079)
chr8 (74-172)||(17716856-17716954)
chr8 (43-174)||(23685132-23685265)
chr8 (4-101)||(6098784-6098881)
chr8 (74-177)||(6387561-6387664)
chr8 (41-136)||(35797436-35797531)
chr8 (1-127)||(5979930-5980055)
chr8 (74-144)||(35689513-35689583)
chr8 (74-128)||(17741604-17741658)
chr8 (8-107)||(7493353-7493453)
chr8 (39-139)||(45246472-45246572)
chr8 (5-63)||(5095768-5095826)
chr8 (74-135)||(1423788-1423849)
chr8 (111-172)||(16441921-16441984)
[»] chr5 (29 HSPs)
chr5 (2-174)||(28490727-28490901)
chr5 (36-174)||(10142015-10142153)
chr5 (28-139)||(25710503-25710614)
chr5 (30-156)||(28090262-28090388)
chr5 (36-174)||(39246609-39246749)
chr5 (7-160)||(34384701-34384856)
chr5 (6-174)||(30325883-30326053)
chr5 (32-174)||(17537137-17537281)
chr5 (30-138)||(5413770-5413878)
chr5 (37-174)||(34368361-34368500)
chr5 (4-175)||(1923559-1923732)
chr5 (4-177)||(28223783-28223958)
chr5 (1-177)||(4714747-4714925)
chr5 (79-170)||(10253164-10253255)
chr5 (32-139)||(43405431-43405538)
chr5 (37-139)||(27592492-27592594)
chr5 (28-175)||(25919215-25919360)
chr5 (42-144)||(28434863-28434963)
chr5 (1-174)||(10666692-10666867)
chr5 (2-134)||(41105575-41105707)
chr5 (19-125)||(34479973-34480079)
chr5 (42-135)||(41330438-41330531)
chr5 (109-177)||(6198529-6198597)
chr5 (1-128)||(2525623-2525750)
chr5 (1-72)||(5465656-5465727)
chr5 (74-141)||(24990922-24990989)
chr5 (74-133)||(43541895-43541954)
chr5 (30-139)||(10950124-10950233)
chr5 (74-139)||(24915093-24915158)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-139)||(27850-27988)
[»] scaffold0204 (1 HSPs)
scaffold0204 (37-142)||(26902-27007)
[»] scaffold0543 (1 HSPs)
scaffold0543 (40-144)||(9697-9801)
[»] scaffold0492 (1 HSPs)
scaffold0492 (40-144)||(11243-11347)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-63)||(204712-204774)
[»] scaffold0057 (1 HSPs)
scaffold0057 (4-138)||(42933-43068)
[»] scaffold0299 (1 HSPs)
scaffold0299 (111-149)||(14178-14216)
[»] scaffold0838 (1 HSPs)
scaffold0838 (51-144)||(2255-2346)
[»] scaffold0832 (1 HSPs)
scaffold0832 (51-144)||(2286-2377)


Alignment Details
Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 10169649 - 10169871
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10169649 tagcaacactctttttttaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 10169748  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgttagaaagtgttgaaaagtgaatgttgttagcatttcttctcgagataatgatcaatttat 200  Q
    || ||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10169749 taggacatatattgatttcatccaataatagagtgaatattagagagtgttgaaaagtgaatgttgttagcatttcttctcgagataatgatcaatttat 10169848  T
Q  201 ttttgtcacaagctagatgaatg 223  Q
    |||||||||| ||||||||||||    
T  10169849 ttttgtcacacgctagatgaatg 10169871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 43771302 - 43771165
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    ||||||| |||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||||||| ||||   |||||||||||||| |||||| |||||    
T  43771302 tagcaacgctctcttttgaacaccctctttaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccacacagagtgg 43771203  T
Q  101 tatgacatatattgatttcatccaataatagagtgagt 138  Q
    |  |||||| |||||||||||||||||| |||||||||    
T  43771202 tgggacatacattgatttcatccaataaaagagtgagt 43771165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 8109132 - 8108954
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| |||||||||  || | ||||| ||||| |||||||||||||||| ||||||| ||||   ||||||||||||||  ||||||| | |    
T  8109132 tagcaacactctcttttgaacactctctctaatactcactttcttattggtttaaatcattgtgggtctacactttgaaaattgaacaaacacaaattag 8109033  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatttct 177  Q
    |  |||||| |||||||||| ||||||| |||||||||| |  ||| ||||||||||||||| ||||| ||||||||||    
T  8109032 tgggacatacattgatttcacccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcatttct 8108954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 47009365 - 47009190
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||| ||| ||||||||| ||| | ||||| ||||| |||||||||||||||| |||||| |||||   |||||||||||||||||||||||| ||    
T  47009365 tagcaacattctcttttgaacaccctctctaatactcactttcttattggtttaaatcattgtgtatctacactttgaaaattgaactcacacaaagcgg 47009266  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgttagaa--agtgttgaaaagtgaatgttgttagcatt 174  Q
    |  |||| | ||| |||| ||||||||| |||||||||| |||||  ||||||||||| ||| | |||||| ||||    
T  47009265 tgagacaaacattaattttatccaataaaagagtgagtgctagaaagagtgttgaaaaatgagttttgttaacatt 47009190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 158
Target Start/End: Original strand, 754586 - 754743
Alignment:
Q  3 gcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggta 102  Q
    |||||||| | |||||||||  || | ||||| |||||||||||||||||||||| ||||||| ||||   ||| ||||||||||| ||||||||||||     
T  754586 gcaacactttcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacttacacaaagtggtg 754685  T
Q  103 tgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagt 158  Q
     ||||||  |||| |||||||||||| | ||||||||||  |||||||||||||||||    
T  754686 ggacatactttgagttcatccaataaaaaagtgagtgttagagaaagtgttgaaaagt 754743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 152
Target Start/End: Original strand, 5044573 - 5044695
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    ||||||||| ||| ||||||||||||||  |||||| ||||  |||| ||||||||||||||||||| | || ||||||||||||||||||||||||||     
T  5044573 taatattcattcttttattggtttaaatcgttgtgggtctacattttaaaaattgaactcacacaaaatagtgtgacatatattgatttcatccaataaa 5044672  T
Q  130 agagtgagtgttagaaagtgttg 152  Q
    | ||||| ||||| |||||||||    
T  5044673 aaagtgaatgttaaaaagtgttg 5044695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 39471330 - 39471158
Alignment:
Q  4 caacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtat 103  Q
    ||||||||| |||| ||||| || | ||||| |||||||||||||||||||||| ||||||| ||||   |||||| |||||||  ||||||||||||      
T  39471330 caacactctcttttaaacattctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaagattgaaccaacacaaagtggtgg 39471231  T
Q  104 gacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |||||| |||||||||||| ||||| |||||  |||||  ||| ||| || |||||||| ||||| |||||||    
T  39471230 gacatacattgatttcatctaataaaagagttggtgttaaagagagtatttaaaagtgagtgttgctagcatt 39471158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 144
Target Start/End: Complemental strand, 722330 - 722190
Alignment:
Q  4 caacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtat 103  Q
    ||||||| | |||||||||  || | ||||| |||||||||||||||||||||| ||||||| ||||   ||| ||||||||||| ||||||||||||      
T  722330 caacactttcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacttacacaaagtggtgg 722231  T
Q  104 gacatatattgatttcatccaataatagagtgagtgttaga 144  Q
    ||||||  ||||||||||||||||| | |||||||| ||||    
T  722230 gacatactttgatttcatccaataaaaaagtgagtgctaga 722190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 24834754 - 24834576
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| |||| |||   || | ||||| |||||||||||||||||||||| ||||||| ||||   |||||||||||||| |||||||| |||    
T  24834754 tagcaacactctcttttaaactctctctctaatagtcactctcttattggtttaaattattgtgggtctacactttgaaaattgaacccacacaaaatgg 24834655  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatttct 177  Q
    |  |||||| ||||||| |||||||||| |  ||||| |||  ||| |||||  |||||||| ||||| ||||||||||    
T  24834654 tgggacatacattgattccatccaataaaaatgtgagcgttagagagagtgtcaaaaagtgagtgttgctagcatttct 24834576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 134
Target Start/End: Complemental strand, 22542554 - 22542424
Alignment:
Q  4 caacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtat 103  Q
    ||||||| | |||||||||  |||||||||| ||||||||||||| |||||||| |||||||  ||||  |||||||||||||| |||||||||||||      
T  22542554 caacactatcttttgaacactctttttaatactcactctcttattagtttaaatcattgtgggactattctttgaaaattgaacccacacaaagtggtgg 22542455  T
Q  104 gacatatattgatttcatccaataatagagt 134  Q
     |||||  |||||||||| |||||| |||||    
T  22542454 aacatactttgatttcattcaataaaagagt 22542424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 26361312 - 26361479
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| ||||||||| ||| | ||||| |||||| ||||||||||||||| ||| ||| ||||   |||||| ||||||| |||||||| |||    
T  26361312 tagcaacactctcttttgaacaccctctctaatactcactcacttattggtttaaatcattatgggtctacactttgaatattgaacccacacaaaatgg 26361411  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgttagaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |  | |||| ||||| |||||||||||| ||||||    |||||  |||||||||||||| ||||| |||||||    
T  26361412 tgggtcatacattgacttcatccaataaaagagtg----ttaga--gtgttgaaaagtgagtgttgctagcatt 26361479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 30 - 147
Target Start/End: Complemental strand, 29699635 - 29699519
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    |||||||||||||||||||| ||||||| ||||| |  ||||  ||||||| | ||||  ||||||||||||  ||||| |||||||||||||||||||     
T  29699635 taatattcactctcttattgttttaaatcattgtcgggctatactttgaaa-tagaaccaacacaaagtggtgggacatgtattgatttcatccaataaa 29699537  T
Q  130 agagtgagtgttagaaag 147  Q
    |||||||||| |||||||    
T  29699536 agagtgagtgctagaaag 29699519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 49242307 - 49242203
Alignment:
Q  40 tctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtg 139  Q
    |||||||||||||||||| |||||| |||||    ||||||||||||| ||||||||||| |  ||||||||||||||||||||||| | | ||||| ||    
T  49242307 tctcttattggtttaaatcattgtgaatctacacattgaaaattgaacccacacaaagtgatgggacatatattgatttcatccaattaaaaagtgactg 49242208  T
Q  140 ttaga 144  Q
    |||||    
T  49242207 ttaga 49242203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 174
Target Start/End: Original strand, 20225383 - 20225518
Alignment:
Q  39 ctctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagt 138  Q
    ||||||||||||||||||| ||||||  ||||   |||| |||| |||| |||| ||||||||  |||||  || |||| |||||||||| |||||||||    
T  20225383 ctctcttattggtttaaatcattgtgagtctacactttggaaatagaacccacaaaaagtggtgggacatgcatggattccatccaataaaagagtgagt 20225482  T
Q  139 gttagaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    | |||| |||||| |||||||| ||||| |||||||    
T  20225483 gctagagagtgttcaaaagtgagtgttgctagcatt 20225518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 30 - 174
Target Start/End: Original strand, 33653522 - 33653668
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    ||||| ||||| |||||||||||||||| |||||||||| || ||||||||||||||  | |||||| ||||  |||||| |||||||||||| |||||     
T  33653522 taatactcactttcttattggtttaaatcattgtggatcaatattttgaaaattgaaaccccacaaaatggtgggacatacattgatttcatcaaataaa 33653621  T
Q  130 agagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
     |||||| |  |  ||| ||||||||||| ||| ||||| |||||||    
T  33653622 tgagtgattaatagagagagtgttgaaaactgagtgttgctagcatt 33653668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 46536293 - 46536384
Alignment:
Q  28 tttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttc 119  Q
    |||||||||||||||||||||| ||||||  | ||||| | ||   ||||||||||||||  ||||||||||||||||||||||||||||||    
T  46536293 tttaatattcactctcttattgctttaaaatagtgtgggtttacactttgaaaattgaacatacacaaagtggtatgacatatattgatttc 46536384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 142
Target Start/End: Original strand, 48339380 - 48339485
Alignment:
Q  37 cactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtga 136  Q
    |||||| |||||||||||||  ||| ||| |||| | |||||||||||||| |||||||||||||   ||||| ||||||||  |||||||| |||||||    
T  48339380 cactcttttattggtttaaagcattatgggtctacgctttgaaaattgaacccacacaaagtggtggaacatacattgatttattccaataagagagtga 48339479  T
Q  137 gtgtta 142  Q
    ||||||    
T  48339480 gtgtta 48339485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 174
Target Start/End: Complemental strand, 49077385 - 49077250
Alignment:
Q  41 ctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgt 140  Q
    ||||||||||||||||| ||||||| ||||   ||| |||||||||| |||||||||||||  |||||||||| |||| ||| ||||| ||| ||||||     
T  49077385 ctcttattggtttaaatcattgtgggtctacactttaaaaattgaacccacacaaagtggtgggacatatattaattttatctaataaaagaatgagtgc 49077286  T
Q  141 t--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |  ||| | ||||||||| ||| ||||| |||||||    
T  49077285 taaagagaatgttgaaaactgagtgttgctagcatt 49077250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 34129433 - 34129571
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    ||||| ||||||| |||||||||||||  ||||||  || |   |||||||||||||| |||||||||||||  || ||| |||||| ||||||||||      
T  34129433 taatactcactcttttattggtttaaaccattgtgagtccacactttgaaaattgaacacacacaaagtggtgggatatacattgatctcatccaataga 34129532  T
Q  130 agagtgagtgtt--agaaagtgttgaaaagtgaatgttg 166  Q
    |||||||||| |  ||| ||| |||||||||||||||||    
T  34129533 agagtgagtgctagagagagttttgaaaagtgaatgttg 34129571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 139
Target Start/End: Original strand, 50481584 - 50481687
Alignment:
Q  36 tcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtg 135  Q
    |||||||||||||||||||||| ||||||  ||||   ||||||||| |||  || ||||||||||  ||||||  ||||||||||||||||| ||||||    
T  50481584 tcactctcttattggtttaaatgattgtgtgtctacactttgaaaatagaaaccatacaaagtggtgagacatactttgatttcatccaataaaagagtg 50481683  T
Q  136 agtg 139  Q
    ||||    
T  50481684 agtg 50481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 53 - 175
Target Start/End: Original strand, 46242000 - 46242122
Alignment:
Q  53 taaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgttagaaagtgttg 152  Q
    ||||| ||||||| ||||| |||||||||||||||  ||||||| ||||  |||||| | ||||||||||| |||| || ||||||  |||| ||||||     
T  46242000 taaatcattgtgggtctatattttgaaaattgaacctacacaaaatggtgggacatacaatgatttcatcccataaaagtgtgagttctagagagtgtta 46242099  T
Q  153 aaaagtgaatgttgttagcattt 175  Q
    |||||||| ||||| || |||||    
T  46242100 aaaagtgagtgttgataacattt 46242122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 20454714 - 20454557
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||| ||| |||||||||  || | ||| | ||||||| |||||| ||||||| ||||||||||||   ||||||||||||||  ||||||||||     
T  20454714 tagcaacattctcttttgaacactctctctaacactcactctgttattgatttaaatcattgtggatctacactttgaaaattgaaccaacacaaagtg- 20454616  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagt 158  Q
       |||||| |||||||| ||| ||||| |||||||||| |  ||| |||||||||||||    
T  20454615 -tggacatacattgattttatctaataaaagagtgagtgctagagagagtgttgaaaagt 20454557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 178
Target Start/End: Original strand, 33996011 - 33996118
Alignment:
Q  73 ttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgttagaaa--gtgttgaaaagtgaatgttgttag 170  Q
    ||||||||||||||| |||| ||||||||  |||||| |||||||| ||  ||||| ||||||| ||||||| |  ||||||||||| || ||||||||     
T  33996011 ttttgaaaattgaacccacaaaaagtggtgagacatacattgatttgatttaataaaagagtgaatgttagagagtgtgttgaaaagagagtgttgttat 33996110  T
Q  171 catttctt 178  Q
    ||||||||    
T  33996111 catttctt 33996118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 174
Target Start/End: Original strand, 24938456 - 24938588
Alignment:
Q  38 actctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgag 137  Q
    |||||||||||||||||||| ||||| | ||||   ||| |||||||||  || ||||| ||||  |||||| ||||||| |||||||||| ||||||||    
T  24938456 actctcttattggtttaaatcattgtaggtctacactttaaaaattgaatccaaacaaaatggtgggacatacattgattacatccaataaaagagtgag 24938555  T
Q  138 tgttagaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |||     |||||| |||||| ||||||| |||||||    
T  24938556 tgt----gagtgttaaaaagtaaatgttgctagcatt 24938588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 128
Target Start/End: Original strand, 31250917 - 31251014
Alignment:
Q  31 aatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataa 128  Q
    |||||| ||||| |||||| ||||||| ||||||| ||||  |||||||||||||||   || ||| ||||  |||||| ||||||||||||||||||    
T  31250917 aatatttactcttttattgatttaaatcattgtgggtctacattttgaaaattgaacgtccataaaatggtgggacatacattgatttcatccaataa 31251014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 40991696 - 40991768
Alignment:
Q  104 gacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    ||||||||||||||||||||||| | |||||||||| |  ||| ||||||||||||||| ||||| |||||||    
T  40991696 gacatatattgatttcatccaatgaaagagtgagtgatagagagagtgttgaaaagtgagtgttgctagcatt 40991768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 46287573 - 46287472
Alignment:
Q  45 tattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgttaga 144  Q
    ||||||||||||| ||||||  || |   |||||||||||||  |||||||||| ||| |||||||||| |||||||||||||| | ||| |||| ||||    
T  46287573 tattggtttaaatcattgtgagtcaacactttgaaaattgaatacacacaaagtagtaagacatatattaatttcatccaataaaatagtaagtgctaga 46287474  T
Q  145 aa 146  Q
    ||    
T  46287473 aa 46287472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 25719145 - 25719257
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatc-tatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataa 128  Q
    ||||| ||||||||| ||||| |||||| ||||||| || ||  ||||| ||||  ||| |||| ||||||||  |||||| |||||||||| |||||||    
T  25719145 taatactcactctctgattgggttaaatcattgtgggtcctacattttggaaatgaaacccacataaagtggtgggacatacattgatttcaaccaataa 25719244  T
Q  129 tagagtgagtgtt 141  Q
     ||||||||||||    
T  25719245 gagagtgagtgtt 25719257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 38537517 - 38537647
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatcta---tgttttgaaaattgaactcacacaaag 97  Q
    |||||||||| | |||||||||  || | ||||| ||| ||| |||||| ||||||| ||| || |||||   | | |||||||||||||||| ||||||    
T  38537517 tagcaacactttcttttgaacactctctctaataatcattcttttattgatttaaatcattatgaatctacactttgttgaaaattgaactcatacaaag 38537616  T
Q  98 tggtatgacatatattgatttcatccaataa 128  Q
    | ||| |||||| |||||||||||| |||||    
T  38537617 tagtaagacatacattgatttcatcaaataa 38537647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 144
Target Start/End: Complemental strand, 50164536 - 50164428
Alignment:
Q  36 tcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtg 135  Q
    ||||| |||||||||||||||| ||||||  ||||   |||||||||||||| | |||||| ||||  || ||| |||||||| |||||||||  |||||    
T  50164536 tcactttcttattggtttaaatcattgtgagtctacactttgaaaattgaacccccacaaaatggtgggagatacattgattttatccaataaatgagtg 50164437  T
Q  136 agtgttaga 144  Q
    |||| ||||    
T  50164436 agtgctaga 50164428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 141
Target Start/End: Original strand, 50652368 - 50652479
Alignment:
Q  29 ttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataa 128  Q
    |||||||||||| |||||||| ||||||| |||||   ||||  |||||||||||||||  ||||||||||||  || ||| |||||||| || ||||||    
T  50652368 ttaatattcactttcttattgatttaaattattgtacgtctacattttgaaaattgaacctacacaaagtggtgagatatacattgattttatgcaataa 50652467  T
Q  129 tagagtgagtgtt 141  Q
     || |||||||||    
T  50652468 aag-gtgagtgtt 50652479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 45310952 - 45311078
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||| ||| ||||||||   || | ||||| | |||||||||||| ||||||| |||||   |||    |||||||||||||  | ||||||||||    
T  45310952 tagcaacattctcttttgaactgactctctaatacttactctcttattgatttaaatcattgtaagtcttcactttgaaaattgaatccccacaaagtgg 45311051  T
Q  101 tatgacatatattgatttcatccaata 127  Q
    |  ||||||||||||||||||||||||    
T  45311052 tgggacatatattgatttcatccaata 45311078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 180
Target Start/End: Original strand, 47237838 - 47237926
Alignment:
Q  94 aaagtggtatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatttcttct 180  Q
    ||||||||  ||||||||||||||||||||||||| ||||||| || |  ||| |||||| ||||| || ||||| ||||||| |||||    
T  47237838 aaagtggtgggacatatattgatttcatccaataaaagagtgaatgctagagagagtgttcaaaagagagtgttgatagcattccttct 47237926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 39016736 - 39016661
Alignment:
Q  104 gacatatattgatttcatccaataatagagtgagtgt--tagaaagtgttgaaaagtgaatgttgttagcatttct 177  Q
    |||||| |||||||||||||||||| | ||| |||||  |||| |||||| ||||| |||||||| ||||||||||    
T  39016736 gacatacattgatttcatccaataaaatagtaagtgttatagagagtgtttaaaagagaatgttgctagcatttct 39016661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 45081749 - 45081809
Alignment:
Q  4 caacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtg 64  Q
    |||||||| |||||||| || |||| ||||| ||||||| |||||||||||||| ||||||    
T  45081749 caacactcctttttgaaaattctttctaatactcactcttttattggtttaaattattgtg 45081809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 151
Target Start/End: Original strand, 37451046 - 37451165
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    ||||| ||||||| |||||||||||||| |||| |  ||||   ||||||||| |||||||||  || ||||| ||  || || ||||  |||||||||     
T  37451046 taatactcactcttttattggtttaaatcattgcgagtctacactttgaaaatagaactcaca--aattggtaagatgtacatggattctatccaataaa 37451143  T
Q  130 agagtgagtgttagaaagtgtt 151  Q
    ||||||||||||||| ||||||    
T  37451144 agagtgagtgttagagagtgtt 37451165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 138
Target Start/End: Complemental strand, 52671979 - 52671869
Alignment:
Q  28 tttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaata 127  Q
    ||||||| ||||| ||||||| |||||||| |||| | || ||   ||| ||||||||||| ||| ||| ||||  |||||| ||| |||||||||||||    
T  52671979 tttaatactcactatcttattagtttaaatcattgagaatttacactttaaaaattgaacttacataaaatggtgggacatacatttatttcatccaata 52671880  T
Q  128 atagagtgagt 138  Q
    | | |||||||    
T  52671879 aaaaagtgagt 52671869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 40991593 - 40991662
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatcta 70  Q
    |||||||||| |||||||||||  || | | ||| ||||||| |||||||||||||| ||||||| ||||    
T  40991593 tagcaacacttttttttgaacactctctctgatactcactcttttattggtttaaatcattgtgggtcta 40991662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 49682795 - 49682950
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctctt-attggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtg 99  Q
    |||||||||| |||||| |||||| ||| ||||| ||||| | || ||||||||||||   ||||| ||||   ||||||||||||| ||| | ||||||    
T  49682795 tagcaacactatttttt-aacatcatttataatactcactttttttattggtttaaatcgatgtggctctacactttgaaaattgaattcaaataaagtg 49682893  T
Q  100 gtatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaa 154  Q
    ||  || ||| ||||||||||||| |||| | ||||| || |  |||||||||||||    
T  49682894 gtgagatatacattgatttcatccgataaaaaagtgaatgctaaagaaagtgttgaa 49682950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 52279263 - 52279348
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaa 86  Q
    |||||||| |||||||| ||||  || | |||||||||||||| ||||| | ||||| ||||||| ||||   |||||||||||||    
T  52279263 tagcaacattcttttttaaacactctatctaatattcactctcctattgatctaaatcattgtgggtctaaactttgaaaattgaa 52279348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 18421835 - 18421960
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| ||||||| |   | ||||||||||||| | |||||||||||||| |||||  ||  ||  ||| |||||| ||  |||||| |||||    
T  18421835 tagcaacactctcttttgaatactttatttaatattcacttttttattggtttaaatcattgtaaatacatactttaaaaattaaa--cacacacagtgg 18421932  T
Q  101 tatgacatatattgatttcatccaataa 128  Q
    |  |||||| |||||||||||| |||||    
T  18421933 tgggacatacattgatttcatctaataa 18421960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 144
Target Start/End: Complemental strand, 19470811 - 19470739
Alignment:
Q  72 gttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgttaga 144  Q
    ||||||||||| ||||||| |||||||||| ||| |||  |  |||||||| ||||| ||||| |||||||||    
T  19470811 gttttgaaaatagaactcatacaaagtggtgtgatatacgtaaatttcatctaataaaagagtaagtgttaga 19470739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 139
Target Start/End: Complemental strand, 38636508 - 38636375
Alignment:
Q  4 caacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtat 103  Q
    |||||||||||||||| ||  || | ||||||| | | |||||||| | ||||| ||||||||||||   ||| ||||||  || |||| ||||| ||      
T  38636508 caacactcttttttgacca--ctctctaatatttattttcttattgatataaatcattgtggatctacactttaaaaattagacccacataaagtagtga 38636411  T
Q  104 gacatatattgatttcatccaataatagagtgagtg 139  Q
    |||||| |||||||| ||| ||||| ||||||||||    
T  38636410 gacatacattgattttatcaaataaaagagtgagtg 38636375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 2e-45; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 26980266 - 26980441
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| |||| ||||  || | ||||| |||||||||||||| ||||||| ||||||||| ||| |||||||||||||||||||||||| |||    
T  26980266 tagcaacactctcttttcaacactctctataatactcactctcttattgatttaaatcattgtggatgtatattttgaaaattgaactcacacaaaatgg 26980365  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |  |||||| |||||||||||||||||||||||||||| ||  ||| ||||||||||||||| |||||||||||||    
T  26980366 tgggacatacattgatttcatccaataatagagtgagtattagagagagtgttgaaaagtgagtgttgttagcatt 26980441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 6133629 - 6133803
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| ||||||||||||| | ||||| |||||||||||||||||| ||| ||||||| | ||   |||||||||||||| |||||||  |||    
T  6133629 tagcaacactctcttttgaacatcctctctaatactcactctcttattggttt-aatcattgtgggtgtagactttgaaaattgaacccacacaatatgg 6133727  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgttagaaag--tgttgaaaagtgaatgttgttagcatt 174  Q
    |  ||||||||||||||||||||||||| || ||||||| |||| ||  ||||||||||||| ||||| |||||||    
T  6133728 tgggacatatattgatttcatccaataaaagggtgagtgctagagagattgttgaaaagtgagtgttgctagcatt 6133803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 25 - 174
Target Start/End: Complemental strand, 41958235 - 41958086
Alignment:
Q  25 ctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatcca 124  Q
    |||| ||||| |||||||||||||||||||||| | ||||| ||||   |||||||||||||| | |||||| ||||  |||||| ||||||||||||||    
T  41958235 ctttctaatactcactctcttattggtttaaatcactgtgggtctacactttgaaaattgaacccccacaaaatggtgggacatacattgatttcatcca 41958136  T
Q  125 ataatagagtgagtgttagaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    ||||  ||||||||| | || ||||||||||||||| ||||  |||||||    
T  41958135 ataaatgagtgagtgcttgagagtgttgaaaagtgagtgttactagcatt 41958086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 931550 - 931375
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    ||||||||||||| ||| ||||   ||| ||||||||||||| |||||||||||||| ||||||| | ||| ||||||||||||||| |||| ||| ||     
T  931550 tagcaacactcttcttttaacactttttctaatattcactcttttattggtttaaatcattgtgggtgtatattttgaaaattgaacccacaaaaaatga 931451  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |  |||||| |||| || ||| |||||| ||||||||| ||  ||| || |||||||||||| ||||| |||||||    
T  931450 tgggacatacattgcttccattcaataaaagagtgagtattagagatagagttgaaaagtgagtgttgctagcatt 931375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 32211788 - 32211926
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| |||| ||||   | ||||||  |||||||||||||||||||||| ||||||| ||||    || ||||||||||||||||||||| |    
T  32211788 tagcaacactctcttttcaacactttctttaatgatcactctcttattggtttaaatcattgtgggtctacaccttaaaaattgaactcacacaaagtag 32211887  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtg 139  Q
    |  |||||| |||||||||||| ||||| ||||||||||    
T  32211888 ttggacatacattgatttcatctaataaaagagtgagtg 32211926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 33 - 139
Target Start/End: Complemental strand, 39499538 - 39499433
Alignment:
Q  33 tattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataataga 132  Q
    |||||||| ||||||||  |||||| ||||||||||||  |||||||||||||||||||| |||||| ||||||||| |||||||| ||| ||||| |||    
T  39499538 tattcactttcttattgaattaaatcattgtggatctacattttgaaaattgaactcacaaaaagtgatatgacatacattgattttatctaataa-aga 39499440  T
Q  133 gtgagtg 139  Q
    |||||||    
T  39499439 gtgagtg 39499433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 2225396 - 2225227
Alignment:
Q  5 aacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatg 104  Q
    |||||||| |||||||||  |||| | ||| ||||| |||||||||||||||| | ||| | ||||   |||| |||  |||| |||||||||||||  |    
T  2225396 aacactctcttttgaacacgctttgtgatactcactttcttattggtttaaatcactgtcggtctacactttgtaaaccgaacccacacaaagtggtggg 2225297  T
Q  105 acatatattgatttcatccaataatagagtgagtgttagaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    ||||| |||||||||||||||||| |||||| ||| |||| ||||||||||| ||| ||||  |||||||    
T  2225296 acatacattgatttcatccaataaaagagtgggtgctagagagtgttgaaaattgagtgttactagcatt 2225227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 174
Target Start/End: Original strand, 19101612 - 19101780
Alignment:
Q  8 actcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgaca 107  Q
    ||||| |||||||||  || | ||||| ||||| |||||||||||||||| ||||  ||||||   ||||||||| |||||| || ||||||||  ||||    
T  19101612 actctcttttgaacactctctctaatactcactttcttattggtttaaatcattgcagatctacactttgaaaatagaactcgcataaagtggtgggaca 19101711  T
Q  108 tatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    || |||||||||||||||||| | |||||||| |  ||| |||||  |||||||||||||| |||||||    
T  19101712 tacattgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgctagcatt 19101780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 11987802 - 11987631
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| |||| ||||  |||| |||||| |||||||||| |||||||||| ||||||| ||||   |||||||||||||| | ||| ||||||    
T  11987802 tagcaacactctcttttaaacactctttctaatatccactctcttaatggtttaaatcattgtgggtctacactttgaaaattgaacccgcactaagtgg 11987703  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttag 170  Q
    |   ||||| ||| ||||||||||||||  || | | ||||  ||| ||||||||||||||| |||||||||    
T  11987702 tggaacatacattaatttcatccaataaatgaataaatgttggagagagtgttgaaaagtgagtgttgttag 11987631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 41948185 - 41948295
Alignment:
Q  36 tcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtg 135  Q
    |||||||||||||| ||||||| ||||||||| ||   ||||||||||||||  |||||||||||||  | ||| |||||||| ||||||||| ||||||    
T  41948185 tcactctcttattgatttaaatcattgtggatttacactttgaaaattgaaccaacacaaagtggtagaatatacattgattttatccaataaaagagtg 41948284  T
Q  136 agtgttagaaa 146  Q
    ||| |||||||    
T  41948285 agtattagaaa 41948295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 30678915 - 30679051
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    ||||||||||||||||||| ||  || | ||| | ||||||||||||||| |||||| ||||||  ||||   |||||||||||||| ||||||||||||    
T  30678915 tagcaacactcttttttgagcactctctctaacactcactctcttattggcttaaatcattgtgagtctacactttgaaaattgaacccacacaaagtgg 30679014  T
Q  101 tatgacatatattgatttcatccaataatagagtgag 137  Q
    |  |||||| |||||||| ||||| | | ||||||||    
T  30679015 tgggacatacattgattttatccattgaaagagtgag 30679051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 8741227 - 8741354
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| |||||||||   | | ||||| ||||||||||||| |||||||| ||||||  | |||  |||||||||||||| |||||||| | |    
T  8741227 tagcaacactctcttttgaacaatttctctaatactcactctcttattagtttaaatcattgtgtgtttatactttgaaaattgaacccacacaaattag 8741326  T
Q  101 tatgacatatattgatttcatccaataa 128  Q
    |  |||||| ||||||||||||||||||    
T  8741327 tgagacatacattgatttcatccaataa 8741354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 8899190 - 8899012
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||| ||| |||||||||  || | ||||| |||||||||||||||||||||| |||||||| |||   |||||||||||||| ||||||||| ||    
T  8899190 tagcaacaatctcttttgaacactctctctaatactcactctcttattggtttaaattattgtggacctacactttgaaaattgaacccacacaaagggg 8899091  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgttaga--aagtgttgaaaagtgaatgttgttagcatttct 177  Q
    |  ||||||  || |||||||| ||| | | ||  |||||||||   | ||||||||||||| ||||| || |||||||    
T  8899090 tgggacatacctttatttcatctaattaaatagcaagtgttagagggaatgttgaaaagtgagtgttgctaacatttct 8899012  T

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Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 22540502 - 22540369
Alignment:
Q  43 cttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgtt- 141  Q
    ||||||||||||||| |||| |||||||   |||| |||| |||||| || ||||||||  |||||| |||||||||||||||||| | |||||||| |     
T  22540502 cttattggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtgagtgcta 22540403  T
Q  142 -agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
     ||| |||||  |||||||||||||| |||||||    
T  22540402 aagagagtgtgcaaaagtgaatgttgctagcatt 22540369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 46 - 142
Target Start/End: Complemental strand, 49730995 - 49730899
Alignment:
Q  46 attggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgtta 142  Q
    |||||||||||| ||||||| ||||   |||||||||||||| |||||||||| || |||||||||||  ||| ||| ||||| |||||||||||||    
T  49730995 attggtttaaatcattgtgggtctacactttgaaaattgaacccacacaaagtagtgtgacatatattagtttaatctaataaaagagtgagtgtta 49730899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 170
Target Start/End: Complemental strand, 33193197 - 33193055
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    ||||| ||| |||||||||||||||||| ||||||| ||||   |||||||||||||| | |||||| ||||   ||||| ||||||||||||||||||     
T  33193197 taatactcattctcttattggtttaaatcattgtgggtctacactttgaaaattgaaccctcacaaaatggtggcacatacattgatttcatccaataaa 33193098  T
Q  130 agagtgagtgt--tagaaagtgttgaaaagtgaatgttgttag 170  Q
      ||||||| |  |||| | |||| ||||||| ||||||||||    
T  33193097 taagtgagtattatagagaatgttaaaaagtggatgttgttag 33193055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 51732452 - 51732294
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||| |||||||||| |  | | ||||| ||||||| |||||||||||||| ||||||| | |||  |||||||||| |||||||| ||||| |    
T  51732452 tagcaacact-ttttttgaacgttttctctaatactcactcttttattggtttaaattattgtgggtttatactttgaaaattaaactcacataaagtag 51732354  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgttagaaagtgttgaaaagtga 160  Q
    |   | ||| ||| |||||||| ||||| | ||||| ||||||| || ||||||||||||    
T  51732353 tggaaaatacattaatttcatcaaataaaaaagtgaatgttagagagcgttgaaaagtga 51732294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 174
Target Start/End: Original strand, 3872676 - 3872812
Alignment:
Q  39 ctctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagt 138  Q
    |||| |||||||||| ||| ||||||| ||||   |||| |||||||||  |||||||||||| |||||||||||||||| ||  ||||  |||||||||    
T  3872676 ctcttttattggtttgaatcattgtgggtctacactttggaaattgaacctacacaaagtggtgtgacatatattgattt-atttaatagaagagtgagt 3872774  T
Q  139 gtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    | |  ||| ||||||||||||||| ||||| |||||||    
T  3872775 gctagagagagtgttgaaaagtgagtgttgctagcatt 3872812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 15523344 - 15523211
Alignment:
Q  43 cttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgtt- 141  Q
    ||||||||||||||| |||| |||||||   |||  |||| |||||| || ||||||||  |||||| |||||||||||||||||| | |||||||| |     
T  15523344 cttattggtttaaatcattgcggatctacactttagaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtgagtgcta 15523245  T
Q  142 -agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
     ||| |||||  |||||||||||||| |||||||    
T  15523244 aagagagtgtgcaaaagtgaatgttgatagcatt 15523211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 15531338 - 15531205
Alignment:
Q  43 cttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgtt- 141  Q
    ||||||||||||||| |||| |||||||   |||  |||| |||||| || ||||||||  |||||| |||||||||||||||||| | |||||||| |     
T  15531338 cttattggtttaaatcattgcggatctacactttagaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtgagtgcta 15531239  T
Q  142 -agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
     ||| |||||  |||||||||||||| |||||||    
T  15531238 aagagagtgtgcaaaagtgaatgttgatagcatt 15531205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 136
Target Start/End: Original strand, 28218081 - 28218187
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    ||||| ||||| |||||||  ||||||| | ||||| ||||   |||||||||||||  |||||||||||||  |||||| ||||||||||||||||||     
T  28218081 taatactcactatcttattaatttaaattactgtggttctacactttgaaaattgaatccacacaaagtggtgagacatacattgatttcatccaataaa 28218180  T
Q  130 agagtga 136  Q
    |||||||    
T  28218181 agagtga 28218187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 144
Target Start/End: Complemental strand, 29673622 - 29673508
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    ||||| ||||| | |||||||||||||||||||| | ||||   |||||||||||||   ||||||| ||||  ||||||||||||||| |||||||||     
T  29673622 taatactcacttttttattggtttaaataattgtagttctacactttgaaaattgaaactacacaaaatggtgggacatatattgattttatccaataaa 29673523  T
Q  130 agagtgagtgttaga 144  Q
    | | |||||||||||    
T  29673522 ataatgagtgttaga 29673508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 37 - 166
Target Start/End: Original strand, 10659808 - 10659940
Alignment:
Q  37 cactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaat-aatagagtg 135  Q
    ||||||||||||||||||||| || |||| ||||   ||||||||||||||  ||||||||||||  |||||  ||||||||||||| || || | ||||    
T  10659808 cactctcttattggtttaaatcatcgtgggtctacactttgaaaattgaacctacacaaagtggtcggacatccattgatttcatcccataaaaaaagtg 10659907  T
Q  136 agtgtt--agaaagtgttgaaaagtgaatgttg 166  Q
    ||||||  ||| ||| ||||||||||| |||||    
T  10659908 agtgttagagagagtattgaaaagtgagtgttg 10659940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 173
Target Start/End: Complemental strand, 35336997 - 35336868
Alignment:
Q  40 tctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtg 139  Q
    |||||||||||||||||| ||||||  ||||  ||  ||||||||||| |||||||||||||  |||    |||||||||||||||||| | | ||||||    
T  35336997 tctcttattggtttaaatcattgtgtgtctacattaagaaaattgaacccacacaaagtggtgagac----attgatttcatccaataaaataatgagtg 35336902  T
Q  140 ttagaaagtgttgaaaagtgaatgttgttagcat 173  Q
     ||||   ||||||||||||| ||||| ||||||    
T  35336901 ctagaggatgttgaaaagtgagtgttgctagcat 35336868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 90 - 174
Target Start/End: Complemental strand, 25543427 - 25543341
Alignment:
Q  90 acacaaagtggtatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    ||||||||||||  ||||||||||||||||||| ||||| ||||| ||||||  ||| |||||| |||||||| ||||| |||||||    
T  25543427 acacaaagtggtgggacatatattgatttcatcaaataaaagagtaagtgttagagagagtgtttaaaagtgagtgttgctagcatt 25543341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 39974207 - 39974266
Alignment:
Q  4 caacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgt 63  Q
    ||||||||| |||||||||| |||| ||||| |||||||||||||||||||||| |||||    
T  39974207 caacactctcttttgaacattctttctaatactcactctcttattggtttaaatcattgt 39974266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 4578674 - 4578752
Alignment:
Q  94 aaagtggtatgacatatattgatttcatccaataatagagtgagtgttagaaagtgttgaaaagtgaatgttgttagca 172  Q
    ||||||||  ||| || |||||||||| ||||||| ||||||||||||||| |||||||||||| || ||||| |||||    
T  4578674 aaagtggtgggacctacattgatttcacccaataaaagagtgagtgttagagagtgttgaaaagagagtgttgctagca 4578752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 50773182 - 50773258
Alignment:
Q  68 ctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgttaga 144  Q
    |||| ||||| |||| |||| |||| ||||||||   |||||||||||||| ||||||||| |||||||||||||||    
T  50773182 ctatattttggaaatggaacccacataaagtggtggaacatatattgattttatccaataaaagagtgagtgttaga 50773258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16948533 - 16948602
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatcta 70  Q
    |||||||||||| | ||||||||  | | ||||| |||||||||||||| ||||||| ||||||||||||    
T  16948533 tagcaacactctctgttgaacattttctctaatactcactctcttattgatttaaatcattgtggatcta 16948602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 37552962 - 37553080
Alignment:
Q  8 actcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgaca 107  Q
    ||||| |||||||||  || ||||||| |||||||||||||| ||||||| ||||||||||||   |||||||||  ||| |||  |||||| |  ||||    
T  37552962 actctcttttgaaca--ctctttaatactcactctcttattgatttaaatcattgtggatctacactttgaaaataaaacccactaaaagtgatgggaca 37553059  T
Q  108 tatattgatttcatccaataa 128  Q
     | ||| ||||||||||||||    
T  37553060 aacattaatttcatccaataa 37553080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 39039470 - 39039534
Alignment:
Q  112 ttgatttcatccaataatagagtgagtgttagaa--agtgttgaaaagtgaatgttgttagcatt 174  Q
    ||||||||||||||||| |||||||||| || ||  ||||||||||||||| ||||| |||||||    
T  39039470 ttgatttcatccaataaaagagtgagtgctaaaaagagtgttgaaaagtgagtgttgctagcatt 39039534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 27570401 - 27570234
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||| ||| |||||||||  || | | | ||||||| ||||||| ||| |||| ||||||| | ||   ||| |||||| |||||||||||| |||    
T  27570401 tagcaacattctcttttgaacactctctctcaaattcactttcttattagttcaaatcattgtgggtttacactttaaaaattaaactcacacaaattgg 27570302  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgt--tagaaagtgttgaaaagtgaatgttg 166  Q
    |  ||||||| || |||||| ||||||| ||| |||||||   ||| |||||| |||||||| |||||    
T  27570301 tgggacatatcttaatttcaaccaataaaagaatgagtgtcagagagagtgttaaaaagtgactgttg 27570234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 50539224 - 50539160
Alignment:
Q  77 gaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgtt 141  Q
    ||||||||||| |||| ||||||||   |||||  ||||||||||||||||| ||||||||||||    
T  50539224 gaaaattgaacccacataaagtggtggaacatactttgatttcatccaataaaagagtgagtgtt 50539160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 177
Target Start/End: Complemental strand, 31074855 - 31074714
Alignment:
Q  37 cactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtga 136  Q
    ||||||||||||||| ||| | ||||||| ||||  |||||||||| |||   ||| |||||| || ||||| ||||||||||||| ||||| ||||| |    
T  31074855 cactctcttattggtctaa-tcattgtgggtctacattttgaaaatagaatcaacataaagtgttaggacatgtattgatttcatcaaataaaagagtaa 31074757  T
Q  137 gtgtta--gaaagtgttgaaaagtgaatgttgttagcatttct 177  Q
     |||||  || |||||| |||  ||| ||||| ||||||||||    
T  31074756 atgttagggagagtgttcaaacatgagtgttgatagcatttct 31074714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 32848660 - 32848762
Alignment:
Q  74 tttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgttagaaag--tgttgaaaagtgaatgttgttagc 171  Q
    ||||||||| |||  |||| ||||||||  |||||| | |||||||| ||||||| |||||||||| |||| ||  |||| ||||| || ||||||||||    
T  32848660 tttgaaaatggaatccacataaagtggtgggacatacaatgatttcacccaataaaagagtgagtgctagagagagtgttcaaaagagagtgttgttagc 32848759  T
Q  172 att 174  Q
    |||    
T  32848760 att 32848762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 5602657 - 5602707
Alignment:
Q  94 aaagtggtatgacatatattgatttcatccaataatagagtgagtgttaga 144  Q
    ||||||||  |||||||||| |||||||||||||| ||||| |||||||||    
T  5602657 aaagtggtgggacatatattaatttcatccaataagagagtaagtgttaga 5602707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 13114767 - 13114817
Alignment:
Q  94 aaagtggtatgacatatattgatttcatccaataatagagtgagtgttaga 144  Q
    ||||||||  ||||||||||||||| ||| ||||| |||||||||||||||    
T  13114767 aaagtggtgggacatatattgattttatctaataaaagagtgagtgttaga 13114817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 157
Target Start/End: Complemental strand, 44760756 - 44760691
Alignment:
Q  94 aaagtggtatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaag 157  Q
    ||||||||||||  || |||||||||||||||||| ||||||  ||||  ||||||||||||||||    
T  44760756 aaagtggtatgatgtacattgatttcatccaataaaagagtggttgtttaagaaagtgttgaaaag 44760691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 37525667 - 37525562
Alignment:
Q  39 ctctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagt 138  Q
    |||||||||| |||||||| ||||| ||||||   |||||||||||||| |||| ||| ||||   ||||| || | ||| ||||||| | ||||||| |    
T  37525667 ctctcttattagtttaaatcattgtagatctagactttgaaaattgaacccacataaaatggtggaacatacatgggttttatccaatgaaagagtgaat 37525568  T
Q  139 gttaga 144  Q
    ||||||    
T  37525567 gttaga 37525562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 128
Target Start/End: Complemental strand, 46335223 - 46335146
Alignment:
Q  51 tttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataa 128  Q
    ||||||| ||||||| |||||   ||||||||  |||||  ||||||||||| || ||| ||||||||||||||||||    
T  46335223 tttaaatcattgtgggtctatacattgaaaatataactctgacaaagtggtaggatatagattgatttcatccaataa 46335146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 27794301 - 27794233
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagt 98  Q
    ||||| ||||||||||||| |||||||| | |||  |||||| |||||||||| |||| ||| ||||||    
T  27794301 taatactcactctcttattagtttaaatcactgtcaatctatattttgaaaatagaacccactcaaagt 27794233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 2e-42; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 34905512 - 34905334
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| ||||||||| ||| | ||||| |||||||||||||||||||||| ||||||| ||||   |||||||||||||| || |||||||||    
T  34905512 tagcaacactctcttttgaacaccctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccaaacaaagtgg 34905413  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatttct 177  Q
    |  |||||| |||||||||||||||||| ||||||||||||  ||| ||||||||||| ||| ||||| ||||||||||    
T  34905412 tgggacatacattgatttcatccaataaaagagtgagtgttagagagagtgttgaaaaatgagtgttgctagcatttct 34905334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 1392803 - 1392640
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| ||||||||| ||| | ||||| |||||||||||||||||||||| |||||||  |||  |||| |||||||||| || ||||||| |    
T  1392803 tagcaacactctcttttgaacaccctatctaatactcactctcttattggtttaaatcattgtgg-gctacattttaaaaattgaacacatacaaagtag 1392705  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgttagaaagtgttgaaaagtgaatgtt 165  Q
    |  |||||| |||||||||||||||||| | |  ||||| |||| |||||| |||||||| ||||    
T  1392704 tgagacatacattgatttcatccaataaaaaatagagtgctagagagtgttaaaaagtgagtgtt 1392640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 5106471 - 5106308
Alignment:
Q  4 caacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtat 103  Q
    |||||| || |||||||||  || | ||||||||||||| ||||||||||||||  |||||| | ||   |||||||||||| | |||||||||||||      
T  5106471 caacaccctcttttgaacacactctctaatattcactctattattggtttaaatccttgtgggtgtacactttgaaaattgatcccacacaaagtggtgg 5106372  T
Q  104 gacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgtt 165  Q
    |||||| |||||||| ||||||||| | ||||||||||  ||||||||||||||||||| ||||    
T  5106371 gacatacattgattttatccaataaaaaagtgagtgttagagaaagtgttgaaaagtgagtgtt 5106308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 174
Target Start/End: Complemental strand, 445965 - 445819
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    ||||| ||| |||||||||||||||||| ||||||  ||||   |||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||     
T  445965 taatactcattctcttattggtttaaatcattgtgactctagactttgaaaattgaacccacacaaagtggtgtgacatacattgatttcatccaataaa 445866  T
Q  130 agagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    | |||||||| |  ||| ||||||||||| ||| | ||| |||||||    
T  445865 aaagtgagtgctagagatagtgttgaaaaatgagtattgctagcatt 445819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 32112725 - 32112848
Alignment:
Q  5 aacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatg 104  Q
    |||||||| |||||||||| || | |||||||||||||||||||| ||||||| ||||||||||||   |||||||||  ||| |||||||| |||| ||    
T  32112725 aacactctcttttgaacattctctctaatattcactctcttattgttttaaatcattgtggatctacactttgaaaataaaacccacacaaaatggtgtg 32112824  T
Q  105 acatatattgatttcatccaataa 128  Q
    ||||  ||||||||||||||||||    
T  32112825 acatgcattgatttcatccaataa 32112848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 177
Target Start/End: Complemental strand, 32122939 - 32122793
Alignment:
Q  33 tattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataataga 132  Q
    |||||||| | ||||||| |||||| ||||||| ||||   |||||||||||||||| |||||| ||||  |||||||||||||||||||||||||   |    
T  32122939 tattcacttttttattggcttaaatcattgtgggtctacactttgaaaattgaactcccacaaaatggtgggacatatattgatttcatccaataaataa 32122840  T
Q  133 gtgagtgttagaa--agtgttgaaaagtgaatgttgttagcatttct 177  Q
    ||||||| | |||  |||||||||||| || ||||||||||||||||    
T  32122839 gtgagtggtggaaagagtgttgaaaagagagtgttgttagcatttct 32122793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 165
Target Start/End: Original strand, 10133189 - 10133328
Alignment:
Q  28 tttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaata 127  Q
    ||||||| ||||||| |||||||||||||| ||||||| ||||   |||||||||||||| | || ||||||||  |||||| | | |||||||||||||    
T  10133189 tttaatactcactcttttattggtttaaatcattgtggttctacactttgaaaattgaacccccataaagtggtgggacatacaataatttcatccaata 10133288  T
Q  128 atagagtgagtgtt--agaaagtgttgaaaagtgaatgtt 165  Q
    |  |||||||||||  ||| ||||||||||||||| ||||    
T  10133289 aatgagtgagtgttagagagagtgttgaaaagtgagtgtt 10133328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 21987468 - 21987293
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    ||||| ||| || |||||||||  || | ||||| ||||| |||||||||||||||| |||| |||||||   |||| |||| |||||| || |||||||    
T  21987468 tagcaccaccctcttttgaacactctctctaatactcactttcttattggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtgg 21987369  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |  || ||| |||||||||||||||||| | |||||||| |  ||| |||||  ||||||||||||||||||||||    
T  21987368 tgggatatacattgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgttagcatt 21987293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 16851977 - 16852104
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| |||||||||||||   |||||  ||||||||||||||||||||| ||||||| ||||   |||||||||||||| |  |||||||||    
T  16851977 tagcaacactctcttttgaacatcctccctaatacccactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccctacaaagtgg 16852076  T
Q  101 tatgacatatattgatttcatccaataa 128  Q
    |  |||||| ||| |||||||| |||||    
T  16852077 tgggacatacatttatttcatctaataa 16852104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 128
Target Start/End: Original strand, 12784956 - 12785070
Alignment:
Q  14 ttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatatt 113  Q
    ||||||| | ||||| |||||| || |||||||||||||||||| ||| ||||||||   ||||||||||||||| ||| ||||| ||| |||||| |||    
T  12784956 ttttgaataccctttctaatatccattctcttattggtttaaatcattatggatctacactttgaaaattgaactaacataaagtagtaagacatacatt 12785055  T
Q  114 gatttcatccaataa 128  Q
    |||| || |||||||    
T  12785056 gattccacccaataa 12785070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 117
Target Start/End: Original strand, 12780776 - 12780879
Alignment:
Q  14 ttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatatt 113  Q
    ||||||||| ||| | ||||||||| || ||||||||||||||| ||||||||||||   ||||||||||||||  ||||||||| ||  |||||| |||    
T  12780776 ttttgaacaccctctctaatattcattcccttattggtttaaatcattgtggatctacactttgaaaattgaaccaacacaaagtagtgagacatacatt 12780875  T
Q  114 gatt 117  Q
    ||||    
T  12780876 gatt 12780879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 31116157 - 31116295
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    ||||| |||||||||||||||||||||| ||||||| | ||    ||| |||| |||| |||||||||| ||  |||||| |||||||||||||||||      
T  31116157 taatactcactctcttattggtttaaatcattgtgggtttacacattggaaatagaacacacacaaagtagtgggacatacattgatttcatccaataga 31116256  T
Q  130 agagtgagtgtt--agaaagtgttgaaaagtgaatgttg 166  Q
    ||||||| ||||  ||| |||||| |||||||| |||||    
T  31116257 agagtgaatgttagagagagtgttcaaaagtgagtgttg 31116295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 32598952 - 32599125
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||| ||| |||| ||||| || ||||||| ||||||| |||||| ||||||| |||||| |||||   |||| |||| | || ||||||||||||    
T  32598952 tagcaacattctcttttaaacattctctttaatactcactcttttattgatttaaatcattgtgaatctacactttggaaatagcacccacacaaagtgg 32599051  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgttagaaagtgttgaaaagtgaatgttgttagcattt 175  Q
       |||||| ||  ||| |||||||||| |||||| ||   | |||||||| |||||| ||||||| ||||||||    
T  32599052 cgggacatacatgtattccatccaataaaagagtgggt-agataaagtgttcaaaagtaaatgttgctagcattt 32599125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 16187438 - 16187536
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| |||| ||||  || | ||||| |||||| ||||||||||||||||||||| | ||||   ||||||||||||||| ||||||| |||    
T  16187438 tagcaacactctcttttcaaca--ctctctaatactcactcgcttattggtttaaataattgtaggtctacactttgaaaattgaacttacacaaaatgg 16187535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 16187656 - 16187754
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| |||| ||||  || | ||||| |||||| ||||||||||||||||||||| | ||||   ||||||||||||||| ||||||| |||    
T  16187656 tagcaacactctcttttcaaca--ctctctaatactcactcgcttattggtttaaataattgtaggtctacactttgaaaattgaacttacacaaaatgg 16187753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 142
Target Start/End: Complemental strand, 2676042 - 2675930
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    ||||| ||||| | |||||||||||||  ||||||| ||||  ||||||||||| |||  | ||||||||||  |||||| ||||| ||||| ||||||     
T  2676042 taatactcacttttttattggtttaaaccattgtgggtctacattttgaaaattaaacctaaacaaagtggtgggacatacattgaattcattcaataaa 2675943  T
Q  130 agagtgagtgtta 142  Q
    ||||||| |||||    
T  2675942 agagtgaatgtta 2675930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 31444062 - 31443989
Alignment:
Q  74 tttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgttagaaag 147  Q
    ||||||||||||||  ||||||| ||||   ||||| ||| |||||||||||||| ||| ||||||||| ||||    
T  31444062 tttgaaaattgaaccgacacaaaatggtggaacataaattaatttcatccaataaaagaatgagtgttaaaaag 31443989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 174
Target Start/End: Complemental strand, 6109959 - 6109872
Alignment:
Q  89 cacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |||| ||||||||| |||||  |||||||| || |||||| |||  |||||||  ||||| |||||||||| |||| |||||||||||    
T  6109959 cacataaagtggtaggacatgcattgattttattcaataaaagaacgagtgtttgagaaaatgttgaaaagagaatcttgttagcatt 6109872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 8441857 - 8441949
Alignment:
Q  5 aacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaag 97  Q
    |||||| |||||||||||  || | ||||| ||||||| ||||||||||| || ||||  | ||||   |||||||||||||||| |||||||    
T  8441857 aacactattttttgaacactctctctaatactcactcttttattggtttagattattgaaggtctacactttgaaaattgaactcccacaaag 8441949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 8450661 - 8450753
Alignment:
Q  5 aacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaag 97  Q
    |||||| |||||||||||  || | ||||| ||||||| ||||||||||| || ||||  | ||||   |||||||||||||||| |||||||    
T  8450661 aacactattttttgaacactctctctaatactcactcttttattggtttagattattgaaggtctacactttgaaaattgaactcccacaaag 8450753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 16436240 - 16436184
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaat 57  Q
    |||||||||||| |||| ||||  |||||||||||||| ||  ||||||||||||||    
T  16436240 tagcaacactctcttttaaacactctttttaatattcagtcgattattggtttaaat 16436184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 34882269 - 34882305
Alignment:
Q  36 tcactctcttattggtttaaataattgtggatctatg 72  Q
    |||||||||||||||||||||| ||||||||| ||||    
T  34882269 tcactctcttattggtttaaatcattgtggatttatg 34882305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 1e-40; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 37776707 - 37776882
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    ||||||||||||||| |||||| ||| | ||||| ||||||||||| |||||||||| ||||| | ||||   |||||||||||||| ||||||||||||    
T  37776707 tagcaacactcttttatgaacaccctctctaatactcactctcttagtggtttaaatcattgtaggtctacactttgaaaattgaacccacacaaagtgg 37776806  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    || |||||| |||||||||||| ||||| |||||||||| |  ||||||||||||||||||| ||||| |||||||    
T  37776807 taggacatacattgatttcatctaataaaagagtgagtgctggagaaagtgttgaaaagtgagtgttgctagcatt 37776882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 28529424 - 28529254
Alignment:
Q  4 caacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtat 103  Q
    ||||||||| ||||||||| ||| | ||||| |||||||||||||||||||||| ||||||| ||||   |||||||||||||| |||||  ||||||      
T  28529424 caacactctcttttgaacaccctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccacac--agtggtgg 28529327  T
Q  104 gacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |||||| |||||||||||||||||| |||||||||| |  ||| ||||||||||||||| ||||| |||||||    
T  28529326 gacatacattgatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcatt 28529254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 4 - 174
Target Start/End: Original strand, 20493452 - 20493624
Alignment:
Q  4 caacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtat 103  Q
    ||||||||| |||||||||  || | || || |||||||||||||||||||||| ||||||| ||||   |||||| ||||||| | ||||||||||||     
T  20493452 caacactctcttttgaacactctctctattactcactctcttattggtttaaatcattgtgggtctacactttgaatattgaacccccacaaagtggtag 20493551  T
Q  104 gacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |||||| ||||||||||||||||||  |||||||||||  ||| ||||||||||||||| ||||| |||||||    
T  20493552 gacatacattgatttcatccaataaatgagtgagtgttagagagagtgttgaaaagtgagtgttgctagcatt 20493624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 41451899 - 41452066
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| |||||||||  || | ||||| |||||||||||||||||||||| ||||||| ||||   |||||||||||||| ||||||||||||    
T  41451899 tagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggtctactctttgaaaattgaacccacacaaagtgg 41451998  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgttagaaa--gtgttgaaaagtgaatgttg 166  Q
    |  ||||||  ||||||||||||||||| |||||||||  |||| |  |||||||||||||| |||||    
T  41451999 tgggacatactttgatttcatccaataaaagagtgagtactagagattgtgttgaaaagtgagtgttg 41452066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 24734881 - 24734714
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| |||||||||  || | ||||| |||||||||||||||||||||| |||||||  |||   |||||||||||||| ||||||||||||    
T  24734881 tagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggcctactctttgaaaattgaacccacacaaagtgg 24734782  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgttagaaa--gtgttgaaaagtgaatgttg 166  Q
    |  ||||||  ||||||||||||||||| |||||||||  |||| |  |||||||||||||| |||||    
T  24734781 tgggacatactttgatttcatccaataaaagagtgagtactagagattgtgttgaaaagtgagtgttg 24734714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 30 - 174
Target Start/End: Complemental strand, 46161094 - 46160950
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    ||||| |||||||||||||||||||||| ||| ||||||||   |||| |||| ||||  ||||||||||||  ||||| |||||||||||||||||||     
T  46161094 taatactcactctcttattggtttaaatcattatggatctacactttggaaatagaaccaacacaaagtggtcggacatgtattgatttcatccaataaa 46160995  T
Q  130 agagtgagtgttagaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |||||||||| |||| |||||| |||||||| ||||| |||||||    
T  46160994 agagtgagtgctagagagtgttcaaaagtgagtgttgctagcatt 46160950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 14236195 - 14236057
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| |||||||||  |||| ||||| ||||| | |||||||| ||||| ||||||||||||   |||| |||| |||||| || |||||||    
T  14236195 tagcaacactctgttttgaacactctttctaatactcacttttttattggtctaaattattgtggatctacactttggaaatagaactcgcataaagtgg 14236096  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtg 139  Q
    |  ||||||||||||||||||||||||| | ||||||||    
T  14236095 tgggacatatattgatttcatccaataaaatagtgagtg 14236057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 18427169 - 18427294
Alignment:
Q  16 ttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattga 115  Q
    ||||||| ||| | ||||| |||||||||||||||||||||| ||||||| ||||   ||||||||| |||| |||||||| ||||  |||||| |||||    
T  18427169 ttgaacaccctctctaatactcactctcttattggtttaaatcattgtgggtctacactttgaaaatagaacccacacaaaatggtgggacatacattga 18427268  T
Q  116 tttcatccaataatagagtgagtgtt 141  Q
    |||||||||||||  |||||||||||    
T  18427269 tttcatccaataaatgagtgagtgtt 18427294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 174
Target Start/End: Complemental strand, 46450213 - 46450068
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacac-aaagtggtatgacatatattgatttcatccaataa 128  Q
    ||||| |||||||||||||||||||||| ||||||| ||||   |||| |||| |||| ||||| ||||||||  |||||| ||||||| |||| |||||    
T  46450213 taatactcactctcttattggtttaaatcattgtgggtctacactttgcaaatagaacccacacaaaagtggtgggacatacattgattccatctaataa 46450114  T
Q  129 tagagtgagtgttagaaagtgttgaaaagtgaatgttgttagcatt 174  Q
     |||||||||| |||| |||||| |||||||| ||||| |||||||    
T  46450113 aagagtgagtgctagagagtgttcaaaagtgagtgttgctagcatt 46450068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 20791472 - 20791297
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    ||||| |||||| |||||||||  || | ||||| ||||| |||||||||||||||| |||| |||||||   |||| |||| |||||| || |||||||    
T  20791472 tagcaccactctcttttgaacactctctctaatactcactttcttattggtttaaatcattgcggatctacactttggaaatagaactcgcataaagtgg 20791373  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |  |||||| |||||||||||||||||| | |||||||| |  ||| |||||  ||||||||| |||| |||||||    
T  20791372 tgggacatacattgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaacgttgctagcatt 20791297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 8824983 - 8825120
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||| ||| |||||||||  || ||||||| |||||||||||||||||||||| ||||||  | ||   |||||||||||||| | || ||| |||    
T  8824983 tagcaacattctgttttgaacactctctttaatactcactctcttattggtttaaattattgtgagtgtagactttgaaaattgaacccgcataaaatgg 8825082  T
Q  101 tatgacatatattgatttcatccaataatagagtgagt 138  Q
    |  ||||||||||||||||||| ||||| || ||||||    
T  8825083 tgggacatatattgatttcatctaataaaagggtgagt 8825120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 73 - 174
Target Start/End: Complemental strand, 30624735 - 30624634
Alignment:
Q  73 ttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgttagaaagtgttgaaaagtgaatgttgttagca 172  Q
    |||||||||||||||||||||||||||||   ||||| ||| |||| || |||||| ||||||||||||||| |||| | |||||||| ||||| |||||    
T  30624735 ttttgaaaattgaactcacacaaagtggtgaaacatacattaattttattcaataaaagagtgagtgttagagagtgctcaaaagtgagtgttgctagca 30624636  T
Q  173 tt 174  Q
    ||    
T  30624635 tt 30624634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 40 - 174
Target Start/End: Complemental strand, 48351573 - 48351437
Alignment:
Q  40 tctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtg 139  Q
    |||||||||| ||||||| ||| ||||| ||   |||||||||||||| |||||||||| ||  ||||||||||||||| ||||||||| |||||| ||     
T  48351573 tctcttattgatttaaatcattatggatatacactttgaaaattgaacccacacaaagtagtgagacatatattgattttatccaataaaagagtgtgtc 48351474  T
Q  140 tt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    ||  ||| |||||| |||| ||| |||||||||||||    
T  48351473 ttaaagagagtgttaaaaactgagtgttgttagcatt 48351437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 5452066 - 5452239
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| |||||||||  || |  |||| || ||||||||||| |||||||  ||| |  ||||   || ||||||||||  ||||||||||||    
T  5452066 tagcaacactctcttttgaacactctctccaatactcgctctcttattgatttaaatccttggg--tctacacttagaaaattgaatccacacaaagtgg 5452163  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |  || ||| |||||||||||||||||| ||||||| ||||  ||| ||||||||||||||| ||||| |||||||    
T  5452164 tgggaaatacattgatttcatccaataaaagagtgaatgttaaagagagtgttgaaaagtgagtgttgctagcatt 5452239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 133
Target Start/End: Original strand, 29588772 - 29588869
Alignment:
Q  36 tcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagag 133  Q
    |||||||||||||| ||||||| ||||||| ||||   ||||||||||||||||||| ||||||  | |||||| |||||||| ||||||||| ||||    
T  29588772 tcactctcttattgatttaaatcattgtgggtctacactttgaaaattgaactcacataaagtgaaaggacatacattgattttatccaataaaagag 29588869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 27243222 - 27243078
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatc-tatgttttgaaaattgaactcacacaaagtg 99  Q
    |||||||||||| |||||||||  |||| ||||| ||||||||| ||||| |||||| | ||||| || ||   |||| |||| |||| |||| ||||||    
T  27243222 tagcaacactctcttttgaacactctttctaatactcactctctcattgggttaaatcaatgtgggtcatacactttggaaatggaacccacataaagtg 27243123  T
Q  100 gtatgacatatattgatttcatccaataatagagtgagtgttaga 144  Q
    ||  |||||  |||||||| ||||||||| |||||||||||||||    
T  27243122 gtgggacatgcattgattttatccaataaaagagtgagtgttaga 27243078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 174
Target Start/End: Complemental strand, 29755636 - 29755501
Alignment:
Q  41 ctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgt 140  Q
    ||||||||||||||||| ||||| ||||||   |||||||||||||| |||||||||| ||   |||||||||||||  || | |||| |||||| ||||    
T  29755636 ctcttattggtttaaatcattgttgatctacactttgaaaattgaacccacacaaagtagtgaaacatatattgattctattcgataaaagagtgggtgt 29755537  T
Q  141 t--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |  ||| | ||||||||||||| ||||| |||||||    
T  29755536 taaagagaatgttgaaaagtgagtgttgctagcatt 29755501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 52123960 - 52124084
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| |||||||||  || | ||||| ||||| |||||||||||||||| ||||||| ||||   |||||||||||||| | |||||| | |    
T  52123960 tagcaacactctcttttgaacactctctctaatactcactttcttattggtttaaatcattgtgggtctacactttgaaaattgaacccccacaaaatag 52124059  T
Q  101 tatgacatatattgatttcatccaa 125  Q
    |  |||||| ||| |||||||||||    
T  52124060 tgggacatacattaatttcatccaa 52124084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 142
Target Start/End: Complemental strand, 22604701 - 22604595
Alignment:
Q  36 tcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtg 135  Q
    ||||||||||||  |||||||| ||||||  ||||  ||||||||||||||||| |||||| ||||  |||||| ||| |||| |||||||||  |||||    
T  22604701 tcactctcttataagtttaaatcattgtgagtctacattttgaaaattgaactcccacaaaatggtgggacatacattaattttatccaataaatgagtg 22604602  T
Q  136 agtgtta 142  Q
    |||||||    
T  22604601 agtgtta 22604595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 164
Target Start/End: Original strand, 26310495 - 26310615
Alignment:
Q  46 attggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgtt--ag 143  Q
    |||||||||||| ||| ||| ||||   ||||||||||||||  ||| ||| ||||  |||||| |||||||||||||||||| ||||| |||| |  ||    
T  26310495 attggtttaaatcattatgggtctacactttgaaaattgaaccaacaaaaaatggtgggacatacattgatttcatccaataaaagagtaagtgctagag 26310594  T
Q  144 aaagtgttgaaaagtgaatgt 164  Q
    | |||||||||||||||||||    
T  26310595 agagtgttgaaaagtgaatgt 26310615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 15790374 - 15790548
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||||||||||| |  || | ||||| |||||||||||||||||||||| ||| |||  |||   |||||||||||  |   || ||| |||    
T  15790374 tagcaacactcttttttgaataatctctctaatactcactctcttattggtttaaatcattatgg-cctacactttgaaaattgtcccaccataaaatgg 15790472  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgttag--aaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |  |||||| |||||||| |||||||||   ||| ||||||||  ||||||||||||||||| | |||||||||||    
T  15790473 tgagacatacattgattttatccaataaataagtaagtgttagaaaaagtgttgaaaagtgagttttgttagcatt 15790548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 128
Target Start/End: Complemental strand, 41607544 - 41607460
Alignment:
Q  44 ttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataa 128  Q
    |||||| ||||||||| ||||||||||   |||||||||| |||||||||||| | ||  |||||||||||||| ||||||||||    
T  41607544 ttattgatttaaataactgtggatctacactttgaaaattaaactcacacaaaatagtgagacatatattgattacatccaataa 41607460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 144
Target Start/End: Original strand, 41707490 - 41707586
Alignment:
Q  48 tggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgttaga 144  Q
    |||||||||| ||||||| |||||  ||| |||||||||| ||||||||||| |   ||||| |||||||| ||||||| | |||||||||||||||    
T  41707490 tggtttaaattattgtgggtctatactttaaaaattgaacccacacaaagtgatgaaacatacattgattttatccaatgagagagtgagtgttaga 41707586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 2419468 - 2419595
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||| | |||||||||||   | ||||||| ||||| |||||||||||||||| ||||||| ||||    ||| |||| |||||||  ||||||||    
T  2419468 tagcaacattgttttttgaacactttctttaatactcactttcttattggtttaaatcattgtgggtctacacattggaaatagaactcatgcaaagtgg 2419567  T
Q  101 tatgacatatattgatttcatccaataa 128  Q
    || |||||  ||||||| ||||||||||    
T  2419568 taggacatgcattgattccatccaataa 2419595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 144
Target Start/End: Complemental strand, 38414810 - 38414680
Alignment:
Q  14 ttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatatt 113  Q
    |||||| ||| || ||||| | |||||||||||||||||||||| || |||||||||   ||| |||||| ||| |||||||| ||||  |||||| |||    
T  38414810 ttttgagcattctctttaacactcactctcttattggtttaaattatcgtggatctacactttaaaaattaaacccacacaaaatggtgggacatacatt 38414711  T
Q  114 gatttcatccaataatagagtgagtgttaga 144  Q
    ||| | ||| ||| | ||||||| |||||||    
T  38414710 gatcttatctaatgagagagtgactgttaga 38414680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 43016585 - 43016444
Alignment:
Q  5 aacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatg 104  Q
    |||||||| ||||||||| ||  | ||||| |||||||||||||| ||||||| ||| || ||||||  ||| ||||||||||| ||||| ||| ||  |    
T  43016585 aacactctattttgaacacccactgtaatactcactctcttattgatttaaatcattatgaatctatactttaaaaattgaactaacacagagtagtgcg 43016486  T
Q  105 acatat--attgatttcatccaataatagagtgagtgttaga 144  Q
    ||||||  |||||||||||  ||||| | ||||| |||||||    
T  43016485 acatatacattgatttcatttaataaaaaagtgaatgttaga 43016444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 165
Target Start/End: Original strand, 10948591 - 10948730
Alignment:
Q  28 tttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaata 127  Q
    ||||||| ||||||| |||||||||||||| ||||||| | ||   ||| ||||||||||  ||||||||||||   ||||| ||| || || |||||||    
T  10948591 tttaatactcactcttttattggtttaaatcattgtgggtttacactttaaaaattgaacaaacacaaagtggtggaacatacattaatatcgtccaata 10948690  T
Q  128 atagagtgagtg--ttagaaagtgttgaaaagtgaatgtt 165  Q
    |   ||||||||  | ||||||||||||||||||| ||||    
T  10948691 aagaagtgagtgcttgagaaagtgttgaaaagtgagtgtt 10948730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 128
Target Start/End: Original strand, 19345047 - 19345131
Alignment:
Q  44 ttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataa 128  Q
    |||||||||||||| ||||||  ||||   |||||||||||||| |  ||||||||||  |||||| ||||||||||||||||||    
T  19345047 ttattggtttaaatcattgtgagtctacaatttgaaaattgaaccccaacaaagtggtgggacatacattgatttcatccaataa 19345131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 177
Target Start/End: Original strand, 40715873 - 40716044
Alignment:
Q  8 actcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgaca 107  Q
    ||||| |||| |||||  ||||||||||||| |||| |||| |||||||| |||||   || |  |||| |||||||||| ||||||||||| |  | ||    
T  40715873 actctcttttaaacatattttttaatattcaatctcctattagtttaaatcattgtatgtcaacattttaaaaattgaacccacacaaagtgatgagtca 40715972  T
Q  108 tatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatttct 177  Q
    || ||| |||||| |  |||| |||||||||| |  ||| ||||||||||||||| ||||| || |||||||    
T  40715973 tacattaatttcaccatataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctaacatttct 40716044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 73 - 174
Target Start/End: Complemental strand, 46576052 - 46575949
Alignment:
Q  73 ttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttag 170  Q
    |||||||||| |||| |||| ||||||||  |||||| |||| ||||| ||||||| ||||||||||||  ||| ||||||||| || || ||||| |||    
T  46576052 ttttgaaaatggaacccacaaaaagtggtgggacatacattggtttcagccaataagagagtgagtgtttgagagagtgttgaagagagagtgttgatag 46575953  T
Q  171 catt 174  Q
    ||||    
T  46575952 catt 46575949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 50156677 - 50156829
Alignment:
Q  14 ttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatatt 113  Q
    |||||||||  |||| ||||| |||||||||||||||||||||| ||||||| ||||   ||| |||||||||| | | |||||| ||   ||||| |||    
T  50156677 ttttgaacactctttgtaatactcactctcttattggtttaaatcattgtgggtctacacttttaaaattgaacccccgcaaagttgtggaacatacatt 50156776  T
Q  114 gatttcatccaataatagagtgagtgttagaaagtgttgaaaagtgaatgttg 166  Q
     ||||||| ||||||   ||| ||| | |||  |||||||||||||| |||||    
T  50156777 aatttcattcaataaataagtaagtatcagagtgtgttgaaaagtgagtgttg 50156829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 156
Target Start/End: Complemental strand, 138921 - 138784
Alignment:
Q  19 aacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgattt 118  Q
    |||| ||| ||||||| | ||||| |||||| ||||||| |||||   | ||  |||| |||||||||  || ||||| ||||  |||||| ||||||||    
T  138921 aacaccctctttaatacttactcttttattgatttaaatcattgtaagtttacattttaaaaattgaatacatacaaaatggtgagacatacattgattt 138822  T
Q  119 catccaataatagagtgagtgttagaaagtgttgaaaa 156  Q
    ||| |||||| |||||||||| |||| ||| |||||||    
T  138821 cattcaataaaagagtgagtgctagagagtcttgaaaa 138784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 125
Target Start/End: Complemental strand, 49072138 - 49072057
Alignment:
Q  44 ttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaa 125  Q
    |||||||||||||| ||||||| ||||   |||||||||  |||||| ||||||||||  |||||| ||| |||||||||||    
T  49072138 ttattggtttaaattattgtgggtctacactttgaaaatataactcatacaaagtggtgagacataaattaatttcatccaa 49072057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 55452048 - 55452184
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    ||||| ||||||| | |||||||||||| ||| ||  ||||   |||| |||| |||| |||||||||||||  |||||| ||  ||| ||||||||||     
T  55452048 taatactcactctttcattggtttaaatcattatgagtctacactttggaaatagaacccacacaaagtggtgggacatacatgtattccatccaataaa 55452147  T
Q  130 agagtgagtgttagaaagtgttgaaaagtgaatgttg 166  Q
    |||||||||   ||| |||||| |||||||| |||||    
T  55452148 agagtgagtaccagagagtgttcaaaagtgagtgttg 55452184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 38138613 - 38138656
Alignment:
Q  28 tttaatattcactctcttattggtttaaataattgtggatctat 71  Q
    ||||||| | |||||||||||||||||||| |||||||||||||    
T  38138613 tttaatacttactctcttattggtttaaatcattgtggatctat 38138656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 45515572 - 45515674
Alignment:
Q  74 tttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagc 171  Q
    ||||||||||||||||||||   ||| |  || ||| |||||||||||||||||| | ||||||||||  ||| |||||| ||||||||  ||||||| |    
T  45515572 tttgaaaattgaactcacactctgtgatgggatatacattgatttcatccaataaaatagtgagtgttggagagagtgttaaaaagtgagcgttgttaac 45515671  T
Q  172 att 174  Q
    |||    
T  45515672 att 45515674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 49418424 - 49418479
Alignment:
Q  2 agcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaat 57  Q
    ||||||||||| |||||||||| || | || ||||||||||||||||| |||||||    
T  49418424 agcaacactctcttttgaacattctctctagtattcactctcttattgatttaaat 49418479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 55283171 - 55283237
Alignment:
Q  111 attgatttcatccaataatagagtgagtgtta--gaaagtgttgaaaagtgaatgttgttagcattt 175  Q
    |||||||| ||||||||||||| | |||||||  || |||||| |||||||| ||||||||||||||    
T  55283171 attgattttatccaataatagaataagtgttaaagagagtgtttaaaagtgagtgttgttagcattt 55283237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 43657073 - 43657143
Alignment:
Q  74 tttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgttaga 144  Q
    |||| |||| ||||||||| ||||||||  |||||| |||||||||||| ||||| | |||||||| ||||    
T  43657073 tttggaaatggaactcacataaagtggtgggacatacattgatttcatcaaataaaatagtgagtgctaga 43657143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 144
Target Start/End: Complemental strand, 24748973 - 24748940
Alignment:
Q  111 attgatttcatccaataatagagtgagtgttaga 144  Q
    |||||||||||||||||| |||||||||||||||    
T  24748973 attgatttcatccaataaaagagtgagtgttaga 24748940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 46237128 - 46237185
Alignment:
Q  79 aaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtga 136  Q
    |||| |||| |||| ||||||||  |||||| |||||||||||||||||| |||||||    
T  46237128 aaatggaacccacataaagtggtgggacatacattgatttcatccaataaaagagtga 46237185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 147
Target Start/End: Original strand, 33164944 - 33164980
Alignment:
Q  111 attgatttcatccaataatagagtgagtgttagaaag 147  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  33164944 attgatttaatccaataagagagtgagtgttagaaag 33164980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 178
Target Start/End: Original strand, 6980126 - 6980303
Alignment:
Q  3 gcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggta 102  Q
    |||||||||| |||||||||   | | ||||| ||||||||||||| ||| |||| ||||||| |||||  |||||||||||||||||||||||||||||    
T  6980126 gcaacactctcttttgaacactttctctaatactcactctcttattagttgaaatcattgtgggtctatactttgaaaattgaactcacacaaagtggta 6980225  T
Q  103 tgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatttctt 178  Q
      |||||  ||||||||||||||||| |||||||||| |  ||| ||||||||||||||||||||| |||||||||||    
T  6980226 gaacataccttgatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgaatgttgctagcatttctt 6980303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 9470256 - 9470114
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| || |||| | ||| | |||||||||||||||||||||||||||| ||||||| ||||   |||||||||||||| || |||||||||    
T  9470256 tagcaacactctcttctgaa-accctctctaatattcactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccaaacaaagtgg 9470158  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgttaga 144  Q
    |  |||||| |||||||||||||||||| |||||||||||||||    
T  9470157 tgggacatacattgatttcatccaataaaagagtgagtgttaga 9470114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 26767765 - 26767940
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||| | |||||||||  || | ||||| ||||||| |||||||||||||| ||||||  ||||   |||||||||||||| | ||||||||||    
T  26767765 tagcaacactttcttttgaacactctatctaatactcactcttttattggtttaaatcattgtgagtctacaatttgaaaattgaaccctcacaaagtgg 26767864  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgttagaaag--tgttgaaaagtgaatgttgttagcatt 174  Q
    |  |||||| |||||||||||||| ||| ||||| |||| |||| ||  ||||||||||||| ||||| |||||||    
T  26767865 tgggacatacattgatttcatccagtaaaagagtaagtgctagagagaatgttgaaaagtgagtgttgctagcatt 26767940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 174
Target Start/End: Complemental strand, 11539573 - 11539424
Alignment:
Q  30 taatattcactctcttattggtttaaat-aattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacat--atattgatttcatccaat 126  Q
    ||||| |||||||||||||||||||||| |||| ||||||||   ||||||||| |||||||||||||||| |   ||||  ||||||||||||||||||    
T  11539573 taatactcactctcttattggtttaaatcaattctggatctacactttgaaaatagaactcacacaaagtgatggaacatacatattgatttcatccaat 11539474  T
Q  127 aatagagtgagtgttagaa--agtgttgaaaagtgaatgttgttagcatt 174  Q
    || |||||||||| |||||  |||||| |||| ||| |||||||||||||    
T  11539473 aaaagagtgagtgctagaaagagtgttcaaaaatgagtgttgttagcatt 11539424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 32856139 - 32856277
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| ||||||||| ||||| ||||| ||| |||||||||||||||||| | | ||||||||   |||||||||| ||| ||||||||||||    
T  32856139 tagcaacactctattttgaacaccctttctaatactcaatctcttattggtttaaatcactatggatctacactttgaaaattcaacccacacaaagtgg 32856238  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtg 139  Q
    |   ||||||||| ||||||||| |||| ||||| ||||    
T  32856239 tgaaacatatattaatttcatccgataaaagagtcagtg 32856277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 12989367 - 12989192
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| |||||||||  || | ||||| |||||||||||||||||||||| ||||||| ||||   || | |||| |||  || |||||||||    
T  12989367 tagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggtctacacttcggaaatagaatccatacaaagtgg 12989268  T
Q  101 tatgacatatattgatttcatccaataatagagtgagt--gttagaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |  |||||| |||||||||||||||| | |||||||||  |  ||| ||||||||||||||| ||||| |||||||    
T  12989267 tgggacatacattgatttcatccaatgaaagagtgagtgagaaagagagtgttgaaaagtgagtgttgctagcatt 12989192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 38464339 - 38464164
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||| ||||| |||||||||  || | ||||| | |||||||||||||||||||| ||||||| ||||   |||||||||||||| ||| |||||||     
T  38464339 tagcaatactctcttttgaacactctctctaatacttactctcttattggtttaaatcattgtgggtctacactttgaaaattgaacccacgcaaagtga 38464240  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgt--tagaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |  |||||| ||||||||||| |||||| | ||| | |||   ||| |||||||||||||||||||| ||||||||    
T  38464239 tgagacatacattgatttcatacaataaaaaagtaattgtcagagagagtgttgaaaagtgaatgttcttagcatt 38464164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 144
Target Start/End: Complemental strand, 44274375 - 44274267
Alignment:
Q  36 tcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtg 135  Q
    ||||||| |||||||||||||| ||||||||||||   ||||||| |||||| |||||||||||||  |||||| |||||||| ||||||| | ||||||    
T  44274375 tcactctgttattggtttaaatcattgtggatctacactttgaaagttgaacccacacaaagtggtgggacatacattgattttatccaatgaaagagtg 44274276  T
Q  136 agtgttaga 144  Q
    | |||||||    
T  44274275 aatgttaga 44274267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 45554732 - 45554568
Alignment:
Q  4 caacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtat 103  Q
    ||||||||| |||||||||| || | ||||| ||||| |||||||||||||||| ||||||| ||||   || ||||||||        |||||||||      
T  45554732 caacactctcttttgaacattctctctaatactcactttcttattggtttaaatcattgtgggtctacacttggaaaattg--------caaagtggtgg 45554641  T
Q  104 gacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |||||| |||||||||||||||||| |||||||||| |  ||| ||||||||||||||| ||||| |||||||    
T  45554640 gacatacattgatttcatccaataaaagagtgagtgctagagagagtgttgaaaagtgagtgttgctagcatt 45554568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 98
Target Start/End: Original strand, 472194 - 472264
Alignment:
Q  28 tttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagt 98  Q
    ||||||| || ||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||    
T  472194 tttaatactcgctctcttattggtttaaatcattgtggatatatattttgaaaattgaactcacacaaagt 472264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 34142143 - 34142283
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| ||| ||| ||  | |||||||||||||||||||||||||||||  ||||||  ||||   |||||||||||||| |||||||||| |    
T  34142143 tagcaacactctctttagaatattttctttaatattcactctcttattggtttaaaccattgtgactctacactttgaaaattgaacccacacaaagtag 34142242  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgtt 141  Q
    |  |||||| ||  |||||||||||||| | ||||| ||||    
T  34142243 tgagacatacatgaatttcatccaataaaaaagtgaatgtt 34142283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 141
Target Start/End: Complemental strand, 15884564 - 15884469
Alignment:
Q  42 tcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgtt 141  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||| |||||||||||||  |||    ||||||||| |||||||| ||||| ||||||    
T  15884564 tcttattggtttaaataattgtgggtctacattttgaaaattgaacccacacaaagtggtgggac----attgatttcgtccaataaaagagtaagtgtt 15884469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 174
Target Start/End: Complemental strand, 19639240 - 19639094
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    |||||||||||||||||||||||||||| ||||| | |||    |||||||||||||||||||| | ||| |  |||||| |||||||||||| |||||     
T  19639240 taatattcactctcttattggtttaaatcattgtaggtctgcactttgaaaattgaactcacactatgtgatgagacatacattgatttcatctaataaa 19639141  T
Q  130 agagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    | ||||| || |  ||| |||||| ||||||||  | ||||||||||    
T  19639140 atagtgaatgctggagagagtgttaaaaagtgagcgctgttagcatt 19639094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 174
Target Start/End: Complemental strand, 19837833 - 19837687
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    |||||||||||||||||||||||||||| ||||| | |||    |||||||||||||||||||| | ||| |  |||||| |||||||||||| |||||     
T  19837833 taatattcactctcttattggtttaaatcattgtaggtctgcactttgaaaattgaactcacactatgtgatgagacatacattgatttcatctaataaa 19837734  T
Q  130 agagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    | ||||| || |  ||| |||||| ||||||||  | ||||||||||    
T  19837733 atagtgaatgctggagagagtgttaaaaagtgagcgctgttagcatt 19837687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 166
Target Start/End: Complemental strand, 17188198 - 17188076
Alignment:
Q  44 ttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgttag 143  Q
    |||||||||||||| ||| |||  |||   ||||||||||||  ||||||||||||||  || | | |||||||||||||||||| | |||||||| |||    
T  17188198 ttattggtttaaatcattctgggcctacactttgaaaattgagttcacacaaagtggtgagatacacattgatttcatccaataaaatagtgagtgatag 17188099  T
Q  144 aaagtgttgaaaagtgaatgttg 166  Q
    | || |||||||||||| |||||    
T  17188098 agagagttgaaaagtgagtgttg 17188076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 165
Target Start/End: Original strand, 36471871 - 36472008
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    ||||| ||||||| |||||||||||||| ||||||  | ||  ||||||||||||||  || | ||||||||  ||||||  |||||||||||||||||     
T  36471871 taatactcactcttttattggtttaaatcattgtgagtttacattttgaaaattgaatccataaaaagtggtgagacatactttgatttcatccaataag 36471970  T
Q  130 agagtgagtgt--tagaaagtgttgaaaagtgaatgtt 165  Q
    ||| |||||||   ||| ||||||||||||||| ||||    
T  36471971 agattgagtgtcagagagagtgttgaaaagtgagtgtt 36472008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 175
Target Start/End: Original strand, 7919311 - 7919448
Alignment:
Q  38 actctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgag 137  Q
    |||||||||||||||||||| ||||||||||||   |||||||||||||  |||||||||||||  |||  |||||||||  |||| || | ||||| ||    
T  7919311 actctcttattggtttaaatcattgtggatctacactttgaaaattgaatccacacaaagtggtgggac--atattgattgtatcccatgagagagtaag 7919408  T
Q  138 tgttaga--aagtgttgaaaagtgaatgttgttagcattt 175  Q
    | |||||  || |||| |||||||| ||||| ||||||||    
T  7919409 tattagaggaaatgttcaaaagtgagtgttgctagcattt 7919448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 1110375 - 1110231
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgt-ggatctatgttttgaaaattgaactcacacaaagtg 99  Q
    ||||||||||||||||||| ||  |||| ||| ||||||||| ||||||| | |||| | ||| |||  |||  |||| |||| |||| |||| ||||||    
T  1110375 tagcaacactcttttttgagcactctttctaacattcactcttttattgggtgaaatcaatgtaggacatatactttggaaatggaacccacataaagtg 1110276  T
Q  100 gtatgacatatattgatttcatccaataatagagtgagtgttaga 144  Q
    ||  |||||| ||||||||||  |||||| |||||||||||||||    
T  1110275 gtgggacatacattgatttcactcaataaaagagtgagtgttaga 1110231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 174
Target Start/End: Complemental strand, 10981665 - 10981519
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    ||||| |||||||||||||||||||||| ||||||| ||||    ||| |||| |||| |||||||||||||  |||||| |||  |||||| |||||      
T  10981665 taatactcactctcttattggtttaaatcattgtgggtctacacattggaaatagaacccacacaaagtggtgggacatacatttttttcattcaataga 10981566  T
Q  130 agagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    | ||||||||||  ||| |||||| |||||||| | |||||| ||||    
T  10981565 aaagtgagtgttagagagagtgttcaaaagtgagttttgttatcatt 10981519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 128
Target Start/End: Complemental strand, 43414502 - 43414404
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataa 128  Q
    ||||| |||| ||||| ||||||||||| |||||||||||||  | ||||||| | ||| || |||| |||||  ||||| ||||||||||||||||||    
T  43414502 taatactcaccctcttcttggtttaaatcattgtggatctatactctgaaaatagcacttacgcaaaatggtagaacatacattgatttcatccaataa 43414404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 174
Target Start/End: Complemental strand, 2476638 - 2476537
Alignment:
Q  73 ttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgttagaaagtgttgaaaagtgaatgttgttagca 172  Q
    |||||||||||||| | ||||||||| ||  |||||| |||||||| ||| ||||| ||||| |||| |||| | ||||||||||||| ||||  |||||    
T  2476638 ttttgaaaattgaagttacacaaagtagtgggacatacattgattttatctaataaaagagtaagtgctagagaatgttgaaaagtgagtgttagtagca 2476539  T
Q  173 tt 174  Q
    ||    
T  2476538 tt 2476537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 31494267 - 31494211
Alignment:
Q  116 tttcatccaataatagagtgagtgttagaaagtgttgaaaagtgaatgttgttagca 172  Q
    ||||||||||||| ||||||||||||||| |||||||||||| || ||||| |||||    
T  31494267 tttcatccaataagagagtgagtgttagagagtgttgaaaagagagtgttgctagca 31494211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 18511286 - 18511388
Alignment:
Q  74 tttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgtta--gaaagtgttgaaaagtgaatgttgttagc 171  Q
    |||||||||||||| |||| ||| | ||  |||||| |||||||| ||||||||| |||||||||| ||  || |||||| |||||||| ||||| ||||    
T  18511286 tttgaaaattgaacccacataaaatagtgggacatacattgattttatccaataaaagagtgagtgatagtgagagtgttaaaaagtgagtgttgctagc 18511385  T
Q  172 att 174  Q
    |||    
T  18511386 att 18511388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 19427361 - 19427424
Alignment:
Q  111 attgatttcatccaataatagagtgagtgttagaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |||||||||||||||| |||||||||||| |||| |||||| ||||| || ||||| |||||||    
T  19427361 attgatttcatccaatgatagagtgagtgctagagagtgttaaaaagagagtgttgctagcatt 19427424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 30849412 - 30849286
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||||||||||   || |||||||||  |||| |||||||| ||||||| ||||||||| |||  ||| ||||| |||| || ||||| |||    
T  30849412 tagcaacactcttttttgatactc-tttttaatacgcactttcttattgatttaaatcattgtggatttatcctttaaaaatagaacccatacaaattgg 30849314  T
Q  101 tatgacatatattgatttcatccaataa 128  Q
    |  ||| || |||||||||||| |||||    
T  30849313 tgggacgtacattgatttcatctaataa 30849286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 174
Target Start/End: Original strand, 41546098 - 41546206
Alignment:
Q  67 tctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgt 164  Q
    |||| ||||||||||| ||||||||  |||||||   |||||||||||| |||||||||||| ||||||| ||||  ||| |||||||||||| || ||     
T  41546098 tctacgttttgaaaatggaactcacgtaaagtggcgggacatatattga-ttcatccaataagagagtgaatgtttgagagagtgttgaaaagagagtga 41546196  T
Q  165 tgttagcatt 174  Q
    || |||||||    
T  41546197 tgctagcatt 41546206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 3804657 - 3804585
Alignment:
Q  104 gacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |||||| |||||||||||||||||| ||||||| ||||  ||| ||||||||||||||| ||| | |||||||    
T  3804657 gacatacattgatttcatccaataaaagagtgaatgttaaagagagtgttgaaaagtgagtgtagctagcatt 3804585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 4552844 - 4552913
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatcta 70  Q
    |||||||||||  ||||||||||  ||| | ||| |||||||||||||||||||||| ||||||| ||||    
T  4552844 tagcaacactcacttttgaacattttttctgatactcactctcttattggtttaaatcattgtgggtcta 4552913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 175
Target Start/End: Original strand, 16719478 - 16719610
Alignment:
Q  45 tattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgtt--a 142  Q
    ||||||||||||| |||| || ||||  |||||||||||||||  |||  || ||||  || ||| |||||||||||| ||||| |||||  ||| |  |    
T  16719478 tattggtttaaatcattgcgggtctacattttgaaaattgaacctacatgaaatggtgggatatacattgatttcatctaataaaagagtatgtgctaaa 16719577  T
Q  143 gaaagtgttgaaaagtgaatgttgttagcattt 175  Q
    || ||||||||||||||| ||||| ||||||||    
T  16719578 gacagtgttgaaaagtgagtgttgctagcattt 16719610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 177
Target Start/End: Original strand, 35316409 - 35316581
Alignment:
Q  5 aacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatg 104  Q
    |||||||| |||||| ||  |||| | ||| |||||||||||||| ||||||| ||||||| ||||   ||| |||||||||   ||| ||| ||||  |    
T  35316409 aacactctcttttgagcactctttatgatactcactctcttattgatttaaatcattgtgggtctacaatttaaaaattgaatcaacataaaatggtggg 35316508  T
Q  105 acatatattgatttcatccaataatagagtgagtgttagaaagtgttgaaaagtgaatgttgttagcatttct 177  Q
    ||||| ||| |||| ||| ||||| |||||||||  |||| | ||||||||| | | ||||  ||||||||||    
T  35316509 acatacattaattttatctaataaaagagtgagtaatagagaatgttgaaaaataagtgttcatagcatttct 35316581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 8009601 - 8009543
Alignment:
Q  89 cacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgttagaaag 147  Q
    |||| ||||||||  ||||||| |||||||||||||| || | ||||||||||||||||    
T  8009601 cacataaagtggtgagacatatgttgatttcatccaacaaaaaagtgagtgttagaaag 8009543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 166
Target Start/End: Original strand, 37652263 - 37652416
Alignment:
Q  15 tttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattg 114  Q
    ||||||||| || | | ||||||||| | |||||||||||||| |||||| |||||    ||| |||||||||  |||||||| |||   ||||| ||||    
T  37652263 tttgaacattctctcttatattcacttttttattggtttaaatcattgtgaatctacacgttggaaattgaacatacacaaaggggtggaacatacattg 37652362  T
Q  115 atttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttg 166  Q
    |||||||| ||||| | ||| |||| |  | |||||||||||| |||| |||||    
T  37652363 atttcatctaataaaaaagtaagtgctaaaaaaagtgttgaaatgtgagtgttg 37652416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 37719900 - 37719835
Alignment:
Q  111 attgatttcatccaataatagagtgagtgttagaa--agtgttgaaaagtgaatgttgttagcatt 174  Q
    |||||||||||||||||| |||||||||| |||||  |||| | ||||| |||||||| |||||||    
T  37719900 attgatttcatccaataaaagagtgagtgctagaaagagtgctcaaaagagaatgttgctagcatt 37719835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 141
Target Start/End: Original strand, 42579767 - 42579801
Alignment:
Q  107 atatattgatttcatccaataatagagtgagtgtt 141  Q
    |||||||||||||||||||||| ||||||||||||    
T  42579767 atatattgatttcatccaataaaagagtgagtgtt 42579801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 138
Target Start/End: Original strand, 4602975 - 4603008
Alignment:
Q  105 acatatattgatttcatccaataatagagtgagt 138  Q
    |||||||||||||||||||||||| |||||||||    
T  4602975 acatatattgatttcatccaataaaagagtgagt 4603008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 15509017 - 15508944
Alignment:
Q  74 tttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgttagaaag 147  Q
    |||| |||| |||| |||| ||| ||||  |||||| ||||||||||  |||||| ||||||||||||||||||    
T  15509017 tttggaaatggaacccacaaaaaatggtgggacatacattgatttcactcaataaaagagtgagtgttagaaag 15508944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 25666700 - 25666767
Alignment:
Q  104 gacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgtta 169  Q
    |||||| ||||||||||||| |||| ||||||| ||||  ||| ||||||||||| ||| ||||||||    
T  25666700 gacatacattgatttcatccgataaaagagtgaatgtttgagagagtgttgaaaaatgagtgttgtta 25666767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 25730443 - 25730499
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaat 57  Q
    ||||||||  || |||| |||||  ||||||||||||||||| ||||||||||||||    
T  25730443 tagcaacatgctcttttaaacattttttttaatattcactcttttattggtttaaat 25730499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 41805873 - 41805921
Alignment:
Q  94 aaagtggtatgacatatattgatttcatccaataatagagtgagtgtta 142  Q
    ||||||||  |||||| |||||||| ||||||||| |||||||||||||    
T  41805873 aaagtggtgggacatacattgattttatccaataaaagagtgagtgtta 41805921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 4e-34; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 27949449 - 27949277
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| |||||||||  || | ||||| ||||||||||||| |||||||| ||||||| ||||   ||||||| ||||||||||||||| |||    
T  27949449 tagcaacactctcttttgaacactctctctaatactcactctcttattagtttaaatcattgtgggtctacactttgaaatttgaactcacacaaaatgg 27949350  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagc 171  Q
    || ||||||  ||||||||||||||||  ||||||||||||  ||| |||||| |||||||| ||||||||||    
T  27949349 taggacataacttgatttcatccaatacaagagtgagtgttagagagagtgttaaaaagtgagtgttgttagc 27949277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 174
Target Start/End: Complemental strand, 32205250 - 32205080
Alignment:
Q  3 gcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggta 102  Q
    |||||||| | ||||||||||||| | ||||| ||||||||||||| |||||||| ||||| || ||||  ||| |||||||||| |||||||| |||||    
T  32205250 gcaacactttcttttgaacatcctctctaatactcactctcttattagtttaaatcattgtagacctatactttaaaaattgaacccacacaaaatggta 32205151  T
Q  103 tgacatatattgatttcatccaataatagagtgagtgttagaaagtgttgaaaagtgaatgttgttagcatt 174  Q
     |||||| |||||||||||||||||| |||||||||   ||| |||||| |||||||| ||||| |||||||    
T  32205150 ggacatacattgatttcatccaataaaagagtgagt-agagagagtgttcaaaagtgagtgttgctagcatt 32205080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 37 - 174
Target Start/End: Original strand, 31502504 - 31502643
Alignment:
Q  37 cactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtga 136  Q
    ||||||||||||||||||||| ||||||  ||||   |||||||||||||| |||||||| ||||  ||||||  ||||||||||||||||| |||||||    
T  31502504 cactctcttattggtttaaatcattgtgagtctacactttgaaaattgaacgcacacaaaatggtgggacataccttgatttcatccaataaaagagtga 31502603  T
Q  137 gtgttagaaag--tgttgaaaagtgaatgttgttagcatt 174  Q
    |||||||| ||  ||||||||||||| ||||| |||||||    
T  31502604 gtgttagagagactgttgaaaagtgagtgttgctagcatt 31502643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 25686839 - 25686966
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| |||||||||| |||| ||||| ||| | |||||||||||||||| ||||||| ||||   |||||||||||||| || | |||||||    
T  25686839 tagcaacactctcttttgaacattctttctaatactcattatcttattggtttaaatcattgtgggtctacactttgaaaattgaacccataaaaagtgg 25686938  T
Q  101 tatgacatatattgatttcatccaataa 128  Q
    ||||||||| |||||||||||| |||||    
T  25686939 tatgacatacattgatttcatcaaataa 25686966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 174
Target Start/End: Complemental strand, 22190112 - 22189940
Alignment:
Q  4 caacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtat 103  Q
    ||||||||| ||||||||| ||| | ||||| ||||||  |||||||||||||| |||| || ||||   |||||||||||||| |||||||||||||      
T  22190112 caacactctcttttgaacaccctctctaatactcactcgtttattggtttaaatcattgcgggtctacactttgaaaattgaacccacacaaagtggtgg 22190013  T
Q  104 gacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    | |||| |||||||||||||||||| |||||||||| |  ||| ||||||||||| ||| ||||  |||||||    
T  22190012 gccatacattgatttcatccaataaaagagtgagtgctagagagagtgttgaaaaatgagtgtttctagcatt 22189940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 46517467 - 46517294
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| ||||||||| ||| | ||||| ||| |||||||||||||||||| ||||||  ||||   |||||||||||||| | |||| | |||    
T  46517467 tagcaacactctcttttgaacagcctctctaatactcattctcttattggtttaaatcattgtgagtctacactttgaaaattgaacccccacagaatgg 46517368  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgttagaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |  || ||| |||||||| |||||||||  ||||||||| |||| |||||| |||||||| ||||| |||||||    
T  46517367 tgggatatacattgattttatccaataaatgagtgagtgctagagagtgttaaaaagtgagtgttgctagcatt 46517294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 165
Target Start/End: Complemental strand, 7775172 - 7775010
Alignment:
Q  4 caacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtat 103  Q
    ||||| ||| |||||||||  || | |||||||||||| |||||| |||||||| ||| ||| || |   ||||||||||||||||||||||||||||      
T  7775172 caacattctcttttgaacactctctctaatattcactcacttatttgtttaaatcattctgg-tccacactttgaaaattgaactcacacaaagtggtgg 7775074  T
Q  104 gacatatattgatttcatccaataatagagtgagtg--ttagaaagtgttgaaaagtgaatgtt 165  Q
    |||||| |||||||||||||||||| ||||||||||   |||| ||||||||||| || |||||    
T  7775073 gacatacattgatttcatccaataaaagagtgagtgctatagagagtgttgaaaaatggatgtt 7775010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 27888458 - 27888283
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| |||||| ||  || | ||| | |||||||||||||||||||||| ||||||| ||||   ||| |||||||||| ||||||||||||    
T  27888458 tagcaacactctcttttgagcactctctctaacactcactctcttattggtttaaatcattgtgggtctacactttaaaaattgaacccacacaaagtgg 27888359  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |  |||||| |||||||| ||||||| | || |||||||||  ||| |||| | |||||||| ||||| |||||||    
T  27888358 tgggacatacattgattttatccaatgagagggtgagtgttagagagagtgctcaaaagtgagtgttgctagcatt 27888283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 32212874 - 32213048
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| ||||||||| ||| | ||||| |||||||||||||||||||||| |||||||  |||  |||| |||||||||| || ||||||| |    
T  32212874 tagcaacactctcttttgaacaccctatataatactcactctcttattggtttaaatcattgtgg-gctacattttaaaaattgaacacatacaaagtag 32212972  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |  |||||| |||||||||||||||||| |||  ||||| |  ||| |||||| |||||||| ||||  |||||||    
T  32212973 tgagacatacattgatttcatccaataaaagatagagtgctagagagagtgttaaaaagtgagtgttactagcatt 32213048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 177
Target Start/End: Complemental strand, 39254256 - 39254081
Alignment:
Q  4 caacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtat 103  Q
    ||||| ||| |||||||||  || ||||| | |||||||||||||| ||||||| ||||||| ||||  |||| ||||||||||  ||||||||||||      
T  39254256 caacattctcttttgaacactctctttaacactcactctcttattgatttaaattattgtgggtctacattttaaaaattgaaccaacacaaagtggtga 39254157  T
Q  104 gacatatattgatttcatccaataatagagtgagtg--ttagaaagtgttgaaaagtgaatgttgttagcatttct 177  Q
     ||||| ||| |||| || |||||| ||||||||||   |||| | ||||||||||||||||||| ||||||||||    
T  39254156 aacatacattaattttattcaataaaagagtgagtgctatagagaatgttgaaaagtgaatgttgctagcatttct 39254081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 36845567 - 36845692
Alignment:
Q  42 tcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgtt 141  Q
    |||||||||||||||| ||||||| |||||  |||||||||||||| |||||||| ||||  || ||||||||||||||| |||||| |||||||| | |    
T  36845567 tcttattggtttaaatcattgtgggtctatactttgaaaattgaacccacacaaattggtgaga-atatattgatttcattcaataaaagagtgagcgat 36845665  T
Q  142 --agaaagtgttgaaaagtgaatgttg 166  Q
      ||||||||||||||| |||||||||    
T  36845666 aaagaaagtgttgaaaaatgaatgttg 36845692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 7459519 - 7459382
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||| || |||||| |  || ||||||| ||||||| |||||||||||||| ||||||||||||| ||||||||||||| |||||| |||||||    
T  7459519 tagcaacacttttatttgaatactctctttaatactcactcttttattggtttaaattattgtggatctatattttgaaaattgagctcacataaagtgg 7459420  T
Q  101 tatgacatatattgatttcatccaataatagagtgagt 138  Q
    |   | ||| |||||||| ||| ||||| ||| |||||    
T  7459419 tggaatatacattgattttatcgaataaaagaatgagt 7459382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 11692355 - 11692220
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| |||||||||  || | ||||| |||||||| |||| |||||||| | ||||  | ||   ||||||||||||||  |||||||||||    
T  11692355 tagcaacactctcttttgaacacactctctaatactcactctcatattagtttaaatcactgtgagtttacactttgaaaattgaacctacacaaagtgg 11692256  T
Q  101 tatgacatatattgatttcatccaataatagagtga 136  Q
    || |||||| |||||||||||||||||| |||||||    
T  11692255 taggacatacattgatttcatccaataaaagagtga 11692220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 44 - 174
Target Start/End: Original strand, 25092708 - 25092840
Alignment:
Q  44 ttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagt--gtt 141  Q
    |||||||||||||| ||||||  |||||  || |||||||||||||||||||||| ||| |||||| ||||||| |||| ||| | |||||| ||  |      
T  25092708 ttattggtttaaattattgtgtgtctatacttagaaaattgaactcacacaaagtagtaggacatacattgattgcatcaaatgaaagagtgggtgcgga 25092807  T
Q  142 agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    ||| ||||||||||||||| |||||||||||||    
T  25092808 agagagtgttgaaaagtgagtgttgttagcatt 25092840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 174
Target Start/End: Complemental strand, 33008276 - 33008105
Alignment:
Q  2 agcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggt 101  Q
    ||||||||||| |||||||||    | |||||| || |||| |||||||||||||| ||||||| ||||    ||| |||| |||| |||||||||||||    
T  33008276 agcaacactctcttttgaaca---ctcttaatactctctcttttattggtttaaatcattgtgggtctacacattggaaatagaacccacacaaagtggt 33008180  T
Q  102 atgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
      |||||| | |||||||||||||||| |||||||||| |  ||| |||||| |||||||| ||||| |||||||    
T  33008179 gggacatacaatgatttcatccaataaaagagtgagtgctagagatagtgttcaaaagtgagtgttgctagcatt 33008105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 6580009 - 6580120
Alignment:
Q  4 caacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtat 103  Q
    ||||||||| |||||||||  || | ||||| |||||||||||||||||||||| ||||||| || || |||||||||||||||  ||||||||| ||      
T  6580009 caacactctcttttgaacactctctctaatactcactctcttattggtttaaattattgtgggtccatattttgaaaattgaacctacacaaagtagtga 6580108  T
Q  104 gacatatattga 115  Q
    |||||| |||||    
T  6580109 gacatacattga 6580120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 144
Target Start/End: Complemental strand, 11824242 - 11824104
Alignment:
Q  4 caacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtat 103  Q
    ||||||||| |||||||||  || | ||||| ||||| |||||||| ||||||| ||||||| | ||   |||||||||||||   ||||||| ||||      
T  11824242 caacactctcttttgaaca--ctctctaatactcactttcttattgatttaaatcattgtgggtttacactttgaaaattgaagctacacaaaatggtgg 11824145  T
Q  104 gacatatattgatttcatccaataatagagtgagtgttaga 144  Q
    |||||| |||||||||||||||||| |||||||||| ||||    
T  11824144 gacatacattgatttcatccaataaaagagtgagtgctaga 11824104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 6442341 - 6442166
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||| | |||||||||   | ||||||| ||||||| |||||||||||||| ||||||| ||||   |||||||||||||  | |||||| |||    
T  6442341 tagcaacactttcttttgaacactatctttaatactcactcttttattggtttaaatcattgtgggtctacactttgaaaattgaatccccacaaaatgg 6442242  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |   ||||| ||||||||||| ||||||  || |||||| |  ||| ||||||||||| ||| |||||||| ||||    
T  6442241 tggaacatacattgatttcatacaataaatgactgagtgatagagagagtgttgaaaaatgagtgttgttaacatt 6442166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 174
Target Start/End: Complemental strand, 14795272 - 14795132
Alignment:
Q  36 tcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtg 135  Q
    ||||||||||||| |||||||| ||| ||||| ||   ||| ||||||||||  ||| ||| ||||  |||||| |||||||||||||||||| | ||||    
T  14795272 tcactctcttattagtttaaatcattatggatatacactttaaaaattgaaccaacaaaaattggtgggacatacattgatttcatccaataaaaaagtg 14795173  T
Q  136 agtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    | || |  ||| ||||||||||||||| ||||| |||||||    
T  14795172 actgatagagagagtgttgaaaagtgagtgttgctagcatt 14795132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 36 - 174
Target Start/End: Complemental strand, 15242264 - 15242124
Alignment:
Q  36 tcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtg 135  Q
    ||||||||||||| |||||||| ||| ||||| ||   ||| ||||||||||  ||| ||| ||||  |||||| |||||||||||||||||| | ||||    
T  15242264 tcactctcttattagtttaaatcattatggatatacactttaaaaattgaaccaacaaaaattggtgggacatacattgatttcatccaataaaaaagtg 15242165  T
Q  136 agtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    | || |  ||| ||||||||||||||| ||||| |||||||    
T  15242164 actgatagagagagtgttgaaaagtgagtgttgctagcatt 15242124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 165
Target Start/End: Original strand, 8073367 - 8073458
Alignment:
Q  76 tgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgttagaaag--tgttgaaaagtgaatgtt 165  Q
    ||||||||||||| ||||||||||||  |||||| ||||||||||||| |||| |||||||||| ||| |||  ||||||||| ||| ||||    
T  8073367 tgaaaattgaacttacacaaagtggtgggacatacattgatttcatccgataaaagagtgagtgctaggaagaatgttgaaaaatgagtgtt 8073458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 171
Target Start/End: Original strand, 44511014 - 44511112
Alignment:
Q  75 ttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagc 171  Q
    ||||||||||||| || |||||||| |  |||||| |||||||||||||||||| | |||||||| |  ||| ||||||||||||| | ||||||||||    
T  44511014 ttgaaaattgaacacagacaaagtgatgagacatacattgatttcatccaataaaaaagtgagtgctagagagagtgttgaaaagtaagtgttgttagc 44511112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 12263469 - 12263574
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    ||||| ||||| |||||||||||||||| ||||||| ||||   |||||||||||| |  |||||||||| |  |||||| ||||||| ||||| ||||     
T  12263469 taatactcactatcttattggtttaaatcattgtgggtctacactttgaaaattgatcctacacaaagtgatgggacatacattgattccatccgataaa 12263568  T
Q  130 agagtg 135  Q
    ||||||    
T  12263569 agagtg 12263574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 158
Target Start/End: Original strand, 44350809 - 44350965
Alignment:
Q  4 caacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtat 103  Q
    ||||||||| ||||||||| | | | ||||| ||||||| || ||||||||||| ||||||  ||||   ||||||||||||||  | ||||||||        
T  44350809 caacactctcttttgaacaccatctctaatactcactcttttgttggtttaaatcattgtgagtctacactttgaaaattgaacctaaacaaagtgacga 44350908  T
Q  104 gacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagt 158  Q
    |||||| |||||||| ||||||||| | ||||  ||||  |||||||||||||||||    
T  44350909 gacatacattgatttgatccaataaaaaagtggatgttagagaaagtgttgaaaagt 44350965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 48374443 - 48374616
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| |||||||||  || | ||||| |||||||||| ||||||||||| ||||||  | ||   |||| |||| |||| || | |||||||    
T  48374443 tagcaacactctcttttgaacactctctctaatactcactctcttgttggtttaaattattgtgagtatacactttggaaatagaacccatagaaagtgg 48374542  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgttagaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |  |||||  ||  ||| ||| |||||| |||||||||  |||| |||||| |||||||| ||||| |||||||    
T  48374543 tgggacatgcatgaattccattcaataaaagagtgagtactagagagtgttcaaaagtgagtgttgctagcatt 48374616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 24539126 - 24539270
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatc-tatgttttgaaaattgaactcacacaaagtg 99  Q
    |||||||||||| ||||| |||  || | ||| | ||||||||| ||||| |||||| | ||||| || ||  ||||| |||| |||  || | ||||||    
T  24539126 tagcaacactctcttttggacactctctctaacactcactctctcattgggttaaatcaatgtgggtcatacattttggaaatggaatccatataaagtg 24539225  T
Q  100 gtatgacatatattgatttcatccaataatagagtgagtgttaga 144  Q
    ||  ||||||||||||||| ||||||||| |||||||||||||||    
T  24539226 gtgggacatatattgattttatccaataaaagagtgagtgttaga 24539270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 144
Target Start/End: Original strand, 17354604 - 17354674
Alignment:
Q  74 tttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgttaga 144  Q
    |||| |||| |||| |||| ||||||||  |||||| |||||||||||||||||| ||| |||||||||||    
T  17354604 tttggaaatagaacccacataaagtggtgggacatacattgatttcatccaataaaagaatgagtgttaga 17354674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 17749777 - 17749727
Alignment:
Q  94 aaagtggtatgacatatattgatttcatccaataatagagtgagtgttaga 144  Q
    ||||||||  ||||||||||||||| ||||||||| |||||||||||||||    
T  17749777 aaagtggtgggacatatattgattttatccaataaaagagtgagtgttaga 17749727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 142
Target Start/End: Complemental strand, 28713156 - 28713051
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    ||||||| ||||| |||||||||||||| ||||| ||||||        ||||  |||||| ||||||||||  |||||||||||||||||| ||||||     
T  28713156 taatatttactcttttattggtttaaatcattgtagatctac-------aaataaaactcatacaaagtggtgagacatatattgatttcattcaataaa 28713064  T
Q  130 agagtgagtgtta 142  Q
    ||||| |||||||    
T  28713063 agagtaagtgtta 28713051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 162
Target Start/End: Original strand, 32178843 - 32178968
Alignment:
Q  36 tcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtg 135  Q
    |||||||||||||| ||||||| ||||||  | ||   ||||||||||||| | | ||| ||||||   ||||| ||| |||||||||||||| | |||     
T  32178843 tcactctcttattgatttaaatcattgtgtgtatacactttgaaaattgaa-taaaacagagtggtggaacatacattaatttcatccaataaaatagta 32178941  T
Q  136 agtgttagaaagtgttgaaaagtgaat 162  Q
    |||| |||| |||||||||||||||||    
T  32178942 agtgctagagagtgttgaaaagtgaat 32178968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 36845495 - 36845564
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatcta 70  Q
    |||||||||||| ||||||| |  || |  ||||||||||||||||||||||||||| ||||||| ||||    
T  36845495 tagcaacactctattttgaatactctctagaatattcactctcttattggtttaaatcattgtgggtcta 36845564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 27320291 - 27320226
Alignment:
Q  111 attgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |||||||| || |||||| ||||||||||||  ||| ||||||||||| ||||||||| |||||||    
T  27320291 attgattttattcaataaaagagtgagtgttggagagagtgttgaaaaatgaatgttgctagcatt 27320226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 19422941 - 19423005
Alignment:
Q  104 gacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttg 166  Q
    |||||| |||||||||||||||| | |||||||||| |  ||| ||||||||||||||| |||||    
T  19422941 gacatacattgatttcatccaatgaaagagtgagtgatagagagagtgttgaaaagtgagtgttg 19423005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 147
Target Start/End: Original strand, 557496 - 557528
Alignment:
Q  115 atttcatccaataatagagtgagtgttagaaag 147  Q
    |||||||||||||| ||||||||||||||||||    
T  557496 atttcatccaataagagagtgagtgttagaaag 557528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 23564076 - 23564156
Alignment:
Q  38 actctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgattt 118  Q
    ||||| |||||||||||||| |  |||||||||   ||||||||| ||||||| ||||||||||  |||||| ||| ||||    
T  23564076 actcttttattggtttaaattacagtggatctacactttgaaaatagaactcatacaaagtggtgcgacatacattaattt 23564156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 31874104 - 31874052
Alignment:
Q  104 gacatatattgatttcatccaataatagagtgagtgttagaaagtgttgaaaa 156  Q
    |||||| |||||||||||||||||| | |||||||| |||| |||||| ||||    
T  31874104 gacatacattgatttcatccaataaaaaagtgagtgctagagagtgttaaaaa 31874052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 7e-33; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 34861196 - 34861350
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| ||||||||| |||   ||||| |||||||||||||||||||||| |||||||  ||     |||||||||||||  |||||||||||    
T  34861196 tagcaacactctcttttgaacaccctccctaatactcactctcttattggtttaaattattgtgggact-----ttgaaaattgaacctacacaaagtgg 34861290  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgttagaaagtgttgaaaagtga 160  Q
    |  |||||| |||||||||||||||||| |||||||||| |||| |||||||||||||||    
T  34861291 tgggacatacattgatttcatccaataaaagagtgagtgctagagagtgttgaaaagtga 34861350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 40 - 178
Target Start/End: Complemental strand, 32072234 - 32072094
Alignment:
Q  40 tctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtg 139  Q
    |||||||||| ||||||||||||||| ||||   ||| |||||||||| |||||||||||||  |||||| ||| |||||||||||||| ||||||||||    
T  32072234 tctcttattgatttaaataattgtgggtctacactttaaaaattgaacccacacaaagtggtgggacatacattcatttcatccaataaaagagtgagtg 32072135  T
Q  140 tt--agaaagtgttgaaaagtgaatgttgttagcatttctt 178  Q
     |  ||| ||||||||||||||||||||| |||||||||||    
T  32072134 ctagagagagtgttgaaaagtgaatgttgctagcatttctt 32072094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 30 - 174
Target Start/End: Original strand, 28413902 - 28414048
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    ||||| ||| ||| |||||||||||||| ||| ||| |||||  ||||||||||||||||||||||||||||  |||||| |||||||||||| |||||     
T  28413902 taatactcattcttttattggtttaaatcattatgggtctatactttgaaaattgaactcacacaaagtggtgggacatacattgatttcatcgaataaa 28414001  T
Q  130 agagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    | |||||| | |  ||| ||||||||||||||| |||||||||||||    
T  28414002 aaagtgagcgctagagagagtgttgaaaagtgagtgttgttagcatt 28414048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 174
Target Start/End: Original strand, 1977181 - 1977352
Alignment:
Q  5 aacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatg 104  Q
    ||||| || |||||||||  || | ||||| ||||||| |||||||||||||| ||||||||||||   |||||||||||||| |||||||||||||  |    
T  1977181 aacacactcttttgaacacactctctaatactcactcttttattggtttaaatcattgtggatctacactttgaaaattgaacccacacaaagtggttgg 1977280  T
Q  105 acatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    ||||| ||||||||||||||| |  |||||||||| |  ||| |||||| |||||||| | ||| |||||||    
T  1977281 acatacattgatttcatccaacagaagagtgagtgctagagagagtgttaaaaagtgagtattgctagcatt 1977352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 144
Target Start/End: Original strand, 36804846 - 36804986
Alignment:
Q  4 caacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtat 103  Q
    ||||||||| |||| ||||| || | ||||| | |||||||||||| ||||||| ||||||||| ||| ||||||||||||||| |||||||| ||||      
T  36804846 caacactctcttttcaacattctctctaatacttactctcttattgatttaaattattgtggatgtatattttgaaaattgaacccacacaaaatggtgg 36804945  T
Q  104 gacatatattgatttcatccaataatagagtgagtgttaga 144  Q
    |||||| ||||||| |||||||||||| ||| ||| |||||    
T  36804946 gacatacattgattccatccaataatatagttagtattaga 36804986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 30 - 128
Target Start/End: Original strand, 17499266 - 17499364
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataa 128  Q
    ||||| |||||||||||||||||||||| ||||||||||||   ||||||||||||||  ||||||| ||||  |||||||||||||||||||||||||    
T  17499266 taatactcactctcttattggtttaaatcattgtggatctacactttgaaaattgaaccaacacaaaatggtgggacatatattgatttcatccaataa 17499364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 128
Target Start/End: Complemental strand, 8904025 - 8903901
Alignment:
Q  4 caacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtat 103  Q
    ||||||||| ||||||||||| ||| || || | |||||||||||||||||||| ||||||| ||||   ||||||||||||||  ||||||||||||      
T  8904025 caacactctcttttgaacatcttttctattacttactctcttattggtttaaatcattgtgggtctacactttgaaaattgaaccgacacaaagtggtgg 8903926  T
Q  104 gacatatattgatttcatccaataa 128  Q
    |||||| |||||||||||| |||||    
T  8903925 gacatacattgatttcatcaaataa 8903901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 16983570 - 16983395
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| |||||||||  || | ||||| |||||||||||||||||||||| ||||||  ||||   |||||||||||||| | |||||||||     
T  16983570 tagcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgagtctacactttgaaaattgaacccccacaaagtga 16983471  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgttag--aaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |  |||||| | |||||| |||||||||   |||||||| |||  | ||||||||||||||| ||||| |||||||    
T  16983470 tgggacataaaatgattttatccaataaatcagtgagtgctagatagagtgttgaaaagtgagtgttgctagcatt 16983395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 9952762 - 9952939
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| ||| |||||  || || |||| ||| | |||||||||||||||| ||||||| | ||   |||||||||||||||||||||||||||    
T  9952762 tagcaacactctcttt-gaacactctcttaaatactcattatcttattggtttaaatcattgtgggtttacactttgaaaattgaactcacacaaagtgg 9952860  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatttct 177  Q
    |  |||||  |||||||||||||||||| | | |||||| |  ||| ||||||||||||| ||||||  ||||||||||    
T  9952861 tgggacatgcattgatttcatccaataaaaaaatgagtgctagagagagtgttgaaaagtaaatgttactagcatttct 9952939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 166
Target Start/End: Original strand, 24055964 - 24056096
Alignment:
Q  36 tcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtg 135  Q
    |||||||||||||||||||||||||||||| ||||   ||||||||||||||| ||||||||||||  |||||| ||| ||||||||  |||| |||| |    
T  24055964 tcactctcttattggtttaaataattgtgggtctacactttgaaaattgaacttacacaaagtggtgggacatacattaatttcatctgataaaagagcg 24056063  T
Q  136 agtgtt--agaaagtgttgaaaagtgaatgttg 166  Q
    |||| |  ||| || |||||||||||| |||||    
T  24056064 agtgctaaagagagcgttgaaaagtgagtgttg 24056096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 37 - 144
Target Start/End: Complemental strand, 8914911 - 8914804
Alignment:
Q  37 cactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtga 136  Q
    ||||||||||||||||||||| ||||||| ||||   |||||||| ||||| |||||||||||||  |||||| |||| ||| ||||||| | |||||||    
T  8914911 cactctcttattggtttaaatcattgtgggtctacactttgaaaaatgaacccacacaaagtggtgggacatacattggttttatccaatgaaagagtga 8914812  T
Q  137 gtgttaga 144  Q
    ||||||||    
T  8914811 gtgttaga 8914804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 174
Target Start/End: Complemental strand, 31301260 - 31301116
Alignment:
Q  31 aatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataata 130  Q
    |||||||| |||||||||||||||||| ||| || |||||    |||||||| ||||||||||||||||||   ||||| |||||||||||||||||| |    
T  31301260 aatattcattctcttattggtttaaattattatg-atctacacattgaaaatagaactcacacaaagtggtggaacatacattgatttcatccaataaaa 31301162  T
Q  131 gagtgagtgttagaa--agtgttgaaaagtgaatgttgttagcatt 174  Q
    |||||||||   |||  |||||| |||||||| |||| ||||||||    
T  31301161 gagtgagtgccggaaatagtgttcaaaagtgagtgttattagcatt 31301116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 35151733 - 35151866
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| |||||||||  || ||||||||||||| ||||||| |||| ||| ||||||| ||||   ||| |||||||||  | |||||| |||    
T  35151733 tagcaacactctcttttgaacactctatttaatattcactttcttattagtttgaattattgtgggtctacactttaaaaattgaatccccacaaaatgg 35151832  T
Q  101 tatgacatatattgatttcatccaataatagagt 134  Q
    |  |||||| |||||||||||||||||| |||||    
T  35151833 tgggacatacattgatttcatccaataaaagagt 35151866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 174
Target Start/End: Complemental strand, 43506682 - 43506539
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    ||||| ||||||||||||||| |||||| ||||||| ||||    |||||| | |||| |||||||||||||   ||||| |||||||  |||||||||     
T  43506682 taatactcactctcttattggcttaaatcattgtgggtctacacattgaaagtagaacccacacaaagtggtggaacatacattgattatatccaataaa 43506583  T
Q  130 agagtgagtgttagaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    | ||||||||||||| |||||| |||||||| ||||| |||||||    
T  43506582 a-agtgagtgttagagagtgttcaaaagtgagtgttgctagcatt 43506539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 174
Target Start/End: Complemental strand, 14236485 - 14236339
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    ||||| |||||||||| ||||||||||| ||||||   |||   ||| ||||||||||| ||||||||||||  ||||||| || ||||| ||||||||     
T  14236485 taatactcactctcttgttggtttaaattattgtgcgcctacactttcaaaattgaacttacacaaagtggtgggacatattttaatttcttccaataaa 14236386  T
Q  130 agagtgagtgttag--aaagtgttgaaaagtgaatgttgttagcatt 174  Q
    | | |||||| |||  |||||||||||||| || |||||||| ||||    
T  14236385 aaaatgagtggtagaaaaagtgttgaaaagagagtgttgttaacatt 14236339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 166
Target Start/End: Complemental strand, 4675079 - 4674920
Alignment:
Q  4 caacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtat 103  Q
    ||||||||| |||||||||  |||| ||||||||| | | |||||||||||||| ||||||   |||   |||||||||| ||||||||||||||| ||     
T  4675079 caacactctattttgaacactctttctaatattcatttttttattggtttaaatcattgtgtgactacactttgaaaattaaactcacacaaagtgatag 4674980  T
Q  104 gacatatattgatttcatccaataatagagtgagtgttagaaagtgt-tgaaaagtgaatgttg 166  Q
    |||    |||||||||||| ||||| ||||||||| ||| | || || | ||||||||||||||    
T  4674979 gac----attgatttcatctaataaaagagtgagttttaaagagagtattaaaagtgaatgttg 4674920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 172
Target Start/End: Complemental strand, 17716954 - 17716856
Alignment:
Q  74 tttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgttagaaagtgttgaaaagtgaatgttgttagca 172  Q
    |||||||||| ||| |||| ||| | ||  ||||||||||||||||||||||||| |  |||||||||| | |||| |||||||||| |||||||||||    
T  17716954 tttgaaaattaaacccacataaaatagtgggacatatattgatttcatccaataaaactgtgagtgttaaagagtgatgaaaagtgagtgttgttagca 17716856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 174
Target Start/End: Complemental strand, 23685265 - 23685132
Alignment:
Q  43 cttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtg--t 140  Q
    ||||||||||||||| |||| | |||||   |||| |||| |||||| || ||||||||  |||||| |||||||||||||||||| | ||||||||  |    
T  23685265 cttattggtttaaatcattgcgaatctacactttggaaatagaactcgcataaagtggtgggacatacattgatttcatccaataaaatagtgagtgctt 23685166  T
Q  141 tagaaagtgttgaaaagtgaatgttgttagcatt 174  Q
     ||| |||||  |||||||||||||| |||||||    
T  23685165 aagagagtgtgcaaaagtgaatgttgctagcatt 23685132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 6098784 - 6098881
Alignment:
Q  4 caacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggt 101  Q
    ||||||||| |||| ||||| || | ||||| |||||||||||||| ||||||| ||||||||||||   ||||||||||||||   |||||||||||    
T  6098784 caacactctcttttaaacattctctctaatactcactctcttattgatttaaattattgtggatctacactttgaaaattgaacatgcacaaagtggt 6098881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 74 - 177
Target Start/End: Complemental strand, 6387664 - 6387561
Alignment:
Q  74 tttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgttagaaagtgttgaaaagtgaatgttgttagcat 173  Q
    |||| |||| |||| |||| ||| ||||  |||||| |||||||| ||||||||| ||||||||||||||| |||||  ||||| || ||||| ||||||    
T  6387664 tttggaaatggaacccacataaaatggtgggacatacattgattttatccaataaaagagtgagtgttagagagtgtccaaaagagagtgttgctagcat 6387565  T
Q  174 ttct 177  Q
    ||||    
T  6387564 ttct 6387561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 136
Target Start/End: Complemental strand, 35797531 - 35797436
Alignment:
Q  41 ctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtga 136  Q
    ||||||||| ||||||| ||||||||| ||   ||| |||||||||||| |||||||||||   ||||| |||||||| ||||||||| |||||||    
T  35797531 ctcttattgatttaaatcattgtggatttacactttaaaaattgaactcgcacaaagtggtggaacatacattgattttatccaataaaagagtga 35797436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 5980055 - 5979930
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| |||||||||  || | ||||| ||||||||||||||||| |||  ||||||  |  |   |||||||||||||| ||||||||||||    
T  5980055 tagcaacactctcttttgaacactctctctaatactcactctcttattggtt-aaaccattgtgagttcacactttgaaaattgaacccacacaaagtgg 5979957  T
Q  101 tatgacatatattgatttcatccaata 127  Q
    |  |||||| |||||| ||||||||||    
T  5979956 tgggacatacattgatctcatccaata 5979930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 144
Target Start/End: Complemental strand, 35689583 - 35689513
Alignment:
Q  74 tttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgttaga 144  Q
    ||||||||| ||||||||| ||||||||  |||||| |||||||||||||||||| | |||||||| ||||    
T  35689583 tttgaaaatggaactcacataaagtggtgggacatacattgatttcatccaataaaaaagtgagtgctaga 35689513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 17741604 - 17741658
Alignment:
Q  74 tttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataa 128  Q
    |||||||||||||||| |||||| ||||  |||||| ||||||||||||||||||    
T  17741604 tttgaaaattgaactctcacaaaatggtgggacatacattgatttcatccaataa 17741658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 7493353 - 7493453
Alignment:
Q  8 actcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactc-acacaaagtggtatgac 106  Q
    ||||| || ||||||  |||| ||||| |||||||||||||||||||||| ||||||  ||||   ||||||||| |||| | ||||||||||||| |||    
T  7493353 actctcttatgaacactctttctaatactcactctcttattggtttaaatcattgtgagtctacactttgaaaatagaacccaacacaaagtggtaagac 7493452  T
Q  107 a 107  Q
    |    
T  7493453 a 7493453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 139
Target Start/End: Complemental strand, 45246572 - 45246472
Alignment:
Q  39 ctctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagt 138  Q
    ||||||||||| ||||||| ||||  ||||||   |||| |||| |||||| || ||||||||  |||||| |||||||| ||||||||| | |||||||    
T  45246572 ctctcttattgatttaaatcattgcagatctacactttggaaatagaactcgcataaagtggtgagacatacattgattttatccaataaaatagtgagt 45246473  T
Q  139 g 139  Q
    |    
T  45246472 g 45246472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 5095768 - 5095826
Alignment:
Q  5 aacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgt 63  Q
    |||||||  |||| |||||||| | ||||| |||||||||||||||||||||| |||||    
T  5095768 aacactcacttttaaacatcctctctaatactcactctcttattggtttaaatcattgt 5095826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 135
Target Start/End: Complemental strand, 1423849 - 1423788
Alignment:
Q  74 tttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtg 135  Q
    ||||||||||||||||  ||||||||||  |||||| |||||||| ||| ||||| ||||||    
T  1423849 tttgaaaattgaactcttacaaagtggttggacatacattgattttatctaataaaagagtg 1423788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 172
Target Start/End: Original strand, 16441921 - 16441984
Alignment:
Q  111 attgatttcatccaataatagagtgagtgt--tagaaagtgttgaaaagtgaatgttgttagca 172  Q
    |||||||||||||| ||| |||||||||||  |||| |||||||||||| |||| || ||||||    
T  16441921 attgatttcatccagtaaaagagtgagtgttatagatagtgttgaaaagagaatattcttagca 16441984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 4e-28; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 28490727 - 28490901
Alignment:
Q  2 agcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggt 101  Q
    ||||||||||| |||||||||  || | ||||| |||||||||||||||||||||| ||||||| ||||   ||| ||||||||||| ||||||||||||    
T  28490727 agcaacactctcttttgaacactctctctaatactcactctcttattggtttaaattattgtgggtctacactttcaaaattgaacttacacaaagtggt 28490826  T
Q  102 atgacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
      ||||||  ||||||||||||||||| | ||||| || |  ||| ||| ||||||||||| ||||| |||||||    
T  28490827 gggacatactttgatttcatccaataaaaaagtgaatgctagagagagttttgaaaagtgactgttgctagcatt 28490901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 36 - 174
Target Start/End: Original strand, 10142015 - 10142153
Alignment:
Q  36 tcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtg 135  Q
    |||||||||||||| ||||||||||||| | ||||   ||||||||| ||||  ||||||||||||  |||||| |||||||| ||||||||| ||||||    
T  10142015 tcactctcttattgatttaaataattgttggtctacactttgaaaatggaaccaacacaaagtggtgggacatacattgattttatccaataaaagagtg 10142114  T
Q  136 agtgttagaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |||| || | ||||||||||| ||| ||||| |||||||    
T  10142115 agtgctatagagtgttgaaaaatgagtgttgctagcatt 10142153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 28 - 139
Target Start/End: Original strand, 25710503 - 25710614
Alignment:
Q  28 tttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaata 127  Q
    ||||||||||| |||||||||||||||||| ||||||| ||||   ||||||||| ||||||| || |||||||| |||||| ||||||||||  |||||    
T  25710503 tttaatattcattctcttattggtttaaattattgtgggtctacactttgaaaatagaactcatacgaagtggtaggacatacattgatttcacacaata 25710602  T
Q  128 atagagtgagtg 139  Q
    | ||||||||||    
T  25710603 aaagagtgagtg 25710614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 30 - 156
Target Start/End: Original strand, 28090262 - 28090388
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    ||||||||||||| |||||||||||||| ||||| ||||||   ||||||||||||||||||||||||||||  |||||  |||||||||||  ||||      
T  28090262 taatattcactcttttattggtttaaatcattgttgatctaaactttgaaaattgaactcacacaaagtggtgggacatgaattgatttcatataatata 28090361  T
Q  130 agagtgagtgttagaaagtgttgaaaa 156  Q
    | ||| |||| |||| |||||||||||    
T  28090362 atagtaagtgatagagagtgttgaaaa 28090388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 174
Target Start/End: Complemental strand, 39246749 - 39246609
Alignment:
Q  36 tcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtg 135  Q
    |||||||||||||||||||||  ||||||| ||||   |||||||| |||||||||||||||||||  |||||| |||||||| ||||||||| | ||||    
T  39246749 tcactctcttattggtttaaagtattgtgggtctacactttgaaaactgaactcacacaaagtggtgggacatacattgattttatccaataagaaagtg 39246650  T
Q  136 agtgttagaaag--tgttgaaaagtgaatgttgttagcatt 174  Q
    | ||||||| ||  || | |||||||| ||||| |||||||    
T  39246649 attgttagagaggatgctcaaaagtgattgttgctagcatt 39246609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 160
Target Start/End: Original strand, 34384701 - 34384856
Alignment:
Q  7 cactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgac 106  Q
    |||||| |||||||||  || ||||||| ||||||| |||| ||| ||||| ||||||  |||||  ||||||||||||||||||||||| | ||  |||    
T  34384701 cactctcttttgaacactctctttaatactcactcttttatcggtctaaatcattgtgagtctataatttgaaaattgaactcacacaaaatagtgggac 34384800  T
Q  107 atatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtga 160  Q
    ||| |||||||||| ||||||| ||| ||||||||  ||||||| || ||||||||    
T  34384801 atacattgatttcacccaataaaagaatgagtgttaaagaaagtattaaaaagtga 34384856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 174
Target Start/End: Original strand, 30325883 - 30326053
Alignment:
Q  6 acactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatga 105  Q
    ||||||| |||||||||  || | ||||| ||||| |||||||||||||||| |||| |||||||   |||| | || |||||| || ||||||||  ||    
T  30325883 acactctcttttgaacactctctctaatactcactttcttattggtttaaatcattgcggatctacactttggagatagaactcgcataaagtggtgaga 30325982  T
Q  106 catatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |||| |||||||||||||||||| | |||||||| |  ||| |||||  |||||||||||||| |||||||    
T  30325983 catacattgatttcatccaataaaatagtgagtgctaaagagagtgtgcaaaagtgaatgttgctagcatt 30326053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 32 - 174
Target Start/End: Original strand, 17537137 - 17537281
Alignment:
Q  32 atattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatag 131  Q
    |||||||||||||||||||||||||| ||| ||||||||   |||||||||| |||  ||| ||| ||||  |||||| |||||||| ||| ||||| ||    
T  17537137 atattcactctcttattggtttaaatcattatggatctacactttgaaaattaaaccaacaaaaattggtgggacatacattgatttgatcaaataaaag 17537236  T
Q  132 agtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |||||||| |  ||| ||||||||||||||| | |||||| ||||    
T  17537237 agtgagtgatagagagagtgttgaaaagtgagtattgttatcatt 17537281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 138
Target Start/End: Original strand, 5413770 - 5413878
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    ||||| ||||| | |||||||||||||| ||| ||| ||||   |||| ||||||||| |||||||||||||  |||||| ||||||||||||||||||     
T  5413770 taatactcacttttttattggtttaaatcattatgggtctacactttgtaaattgaacccacacaaagtggtgggacatacattgatttcatccaataaa 5413869  T
Q  130 agagtgagt 138  Q
    |||||||||    
T  5413870 agagtgagt 5413878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 174
Target Start/End: Complemental strand, 34368500 - 34368361
Alignment:
Q  37 cactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtga 136  Q
    ||||||||||||||||||||| ||||||| ||||   |||||||| ||||| |||||||||||||   ||||| |||| ||| ||||||| | |||||||    
T  34368500 cactctcttattggtttaaatcattgtgggtctacactttgaaaaatgaacccacacaaagtggtggaacatacattggttttatccaatgaaagagtga 34368401  T
Q  137 gtgtt--agaaagtgttgaaaagtgaatgttgttagcatt 174  Q
    |||||  |||||||||| |||| | | ||||| |||||||    
T  34368400 gtgttagagaaagtgttcaaaaataagtgttgctagcatt 34368361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 1923559 - 1923732
Alignment:
Q  4 caacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtat 103  Q
    ||||||||||||||||||||| | | ||||| ||| | |||||||||||||||| |||||  | |||   ||| |||||||||||||||||||||||| |    
T  1923559 caacactcttttttgaacatcatctctaatactcattatcttattggtttaaatcattgtaaaactacactttaaaaattgaactcacacaaagtggtgt 1923658  T
Q  104 gacatatattgatttcatccaataatagagtgagtgttag--aaagtgttgaaaagtgaatgttgttagcattt 175  Q
    |||||| |||  || |||| ||||| | ||  |||| |||  | ||| ||||||||||||||||| | ||||||    
T  1923659 gacatacattctttgcatctaataaaaaagaaagtggtaggtagagtattgaaaagtgaatgttgctggcattt 1923732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 177
Target Start/End: Original strand, 28223783 - 28223958
Alignment:
Q  4 caacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtat 103  Q
    |||||| || ||||||||||||| | ||||| ||||||| |||||||||||||| ||| ||| |||||  |||||||||||| | |||||||| | |       
T  28223783 caacaccctcttttgaacatcctctctaatactcactcttttattggtttaaatcattatgggtctatactttgaaaattgagcccacacaaaattggtg 28223882  T
Q  104 gacatatattgatttcatccaataatagagtgagtgtt--agaaagtgttgaaaagtgaatgttgttagcatttct 177  Q
     ||||| | | ||||||| |||||| ||| | ||||||  ||  ||||||||||||||| ||||| ||||||||||    
T  28223883 aacatacaataatttcattcaataaaagaataagtgttaaaggtagtgttgaaaagtgagtgttgctagcatttct 28223958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 4714925 - 4714747
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||||||||||| |||||||||| || | ||||||   |||| |||||||| ||||| |||||| |||||  |||||||||| |||| |||||||| ||     
T  4714925 tagcaacactctcttttgaacattctctctaatatgttctcttttattggtataaatcattgtgtatctacattttgaaaatagaacccacacaaaatga 4714826  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgttagaa--agtgttgaaaagtgaatgttgttagcatttct 177  Q
    |  |||| | | | |||| ||||||||| | ||||| ||||| ||  || ||| ||||||||| |||||||||||||||    
T  4714825 tgggacacacaataatttaatccaataaaaaagtgaatgttaaaaagagggttcaaaagtgaaagttgttagcatttct 4714747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 79 - 170
Target Start/End: Original strand, 10253164 - 10253255
Alignment:
Q  79 aaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgttagaaagtgttgaaaagtgaatgttgttag 170  Q
    |||| ||||||||| ||||||||  |||||| ||| |||||||||||||  ||||||||||||||| ||| || ||||| ||||||||||||    
T  10253164 aaatagaactcacataaagtggtgggacatacattaatttcatccaatagaagagtgagtgttagagagtattcaaaagagaatgttgttag 10253255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 43405538 - 43405431
Alignment:
Q  32 atattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatag 131  Q
    |||||||||||||||||| ||||||| ||||||| ||||   |||| |||| ||||  | ||||||||||  |||||| ||||||||||| |||||| ||    
T  43405538 atattcactctcttattgatttaaatcattgtgggtctacactttggaaatagaacatatacaaagtggtgagacatacattgatttcattcaataaaag 43405439  T
Q  132 agtgagtg 139  Q
    ||||||||    
T  43405438 agtgagtg 43405431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 139
Target Start/End: Original strand, 27592492 - 27592594
Alignment:
Q  37 cactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtga 136  Q
    ||||||||||||||||||||| ||||  ||||||   |||| |||| |||||| || ||||||||  |||||| |||||||||||||||||| | |||||    
T  27592492 cactctcttattggtttaaatcattgcagatctacactttggaaatagaactcgcataaagtggtgagacatacattgatttcatccaataaaatagtga 27592591  T
Q  137 gtg 139  Q
    |||    
T  27592592 gtg 27592594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 175
Target Start/End: Complemental strand, 25919360 - 25919215
Alignment:
Q  28 tttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaata 127  Q
    ||||||||||| | | |||||||||||||| ||||||  ||||   |||||||||||| | |||||||| ||||  |||||||||||||||||||   ||    
T  25919360 tttaatattcatttttttattggtttaaatcattgtgagtctacactttgaaaattgatcccacacaaaatggtgagacatatattgatttcatcatgta 25919261  T
Q  128 atagagtgagtgttagaaagtgttgaaaagtgaatgttgttagcattt 175  Q
      | || || ||||||  |||||| |||||| ||||||||||||||||    
T  25919260 gaaaagcgaatgttag--agtgttaaaaagtaaatgttgttagcattt 25919215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 144
Target Start/End: Original strand, 28434863 - 28434963
Alignment:
Q  42 tcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgtt 141  Q
    |||||||||||||||| ||||||| ||||   ||||||||||||||  ||||  ||||||  ||||||||||||||| ||||||||| ||| | ||||||    
T  28434863 tcttattggtttaaatcattgtgggtctaaactttgaaaattgaaccaacac--agtggtgggacatatattgattttatccaataaaagaattagtgtt 28434960  T
Q  142 aga 144  Q
    |||    
T  28434961 aga 28434963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 10666692 - 10666867
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    |||| |||||||||||| || |  || ||||| |||||||||||||||||||||||| | ||||  ||||   ||| ||||| |||| |||| |||||||    
T  10666692 tagctacactctttttttaagactctctttaacattcactctcttattggtttaaattaatgtgagtctacaatttaaaaatggaacccacataaagtgg 10666791  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtgttagaaag--tgttgaaaagtgaatgttgttagcatt 174  Q
    || || ||| | |||||| ||| ||||| ||| ||| | ||| ||||  |||| ||||| ||||||| ||||||||    
T  10666792 taggatatacaatgattttatctaataagagattgacttttataaagattgttcaaaagagaatgttattagcatt 10666867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 41105575 - 41105707
Alignment:
Q  2 agcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggt 101  Q
    ||||||||||| |||||| ||  || | ||||| || ||||||||||||||||||| | ||||| | |    |||||||||||||| |||||||||| ||    
T  41105575 agcaacactctcttttgagcactctctctaatactcgctctcttattggtttaaatcactgtgggtatgcactttgaaaattgaacccacacaaagtagt 41105674  T
Q  102 atgacatatattgatttcatccaataatagagt 134  Q
      |||||   ||||||||||||||||| |||||    
T  41105675 gggacatcccttgatttcatccaataaaagagt 41105707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 34479973 - 34480079
Alignment:
Q  19 aacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgattt 118  Q
    |||||||||| ||||| | | |||||||| | ||||||| ||||||| |||    ||| ||||||||| ||||||||| ||||  || ||||||||||||    
T  34479973 aacatcctttctaatacttaatctcttatcgatttaaattattgtgggtctgcactttaaaaattgaattcacacaaaatggtgagatatatattgattt 34480072  T
Q  119 catccaa 125  Q
    |||||||    
T  34480073 catccaa 34480079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 135
Target Start/End: Original strand, 41330438 - 41330531
Alignment:
Q  42 tcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtg 135  Q
    |||||||||||||||| ||||||  ||||   ||||||||||||||  |||||||||| |  |||||| ||| |||||||| ||||| ||||||    
T  41330438 tcttattggtttaaatcattgtgagtctacactttgaaaattgaacctacacaaagtgatgggacatacattaatttcatctaataaaagagtg 41330531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 177
Target Start/End: Complemental strand, 6198597 - 6198529
Alignment:
Q  109 atattgatttcatccaataatagagtgagtgttagaaagtgttgaaaagtgaatgttgttagcatttct 177  Q
    |||| |||||||||| ||||  |||||| |||| || |||||||||||| || ||||||||||||||||    
T  6198597 atatggatttcatcccataaacgagtgattgttggagagtgttgaaaagagattgttgttagcatttct 6198529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 2525750 - 2525623
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    ||||| |||| ||| || ||||| || | |||||||||||||||||||  ||||||| ||| || || ||   ||||||||  ||| |||||||||||||    
T  2525750 tagcaccactatttattaaacattctatataatattcactctcttattaatttaaatcattatgtatttacactttgaaaacagaaatcacacaaagtgg 2525651  T
Q  101 tatgacatatattgatttcatccaataa 128  Q
    |   | ||| ||||||||||||||||||    
T  2525650 tgatagatacattgatttcatccaataa 2525623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 5465656 - 5465727
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatg 72  Q
    ||||||||||||   |||||||   ||| |||||||||||||||||||||||||||| ||| ||| ||||||    
T  5465656 tagcaacactctccattgaacactttttctaatattcactctcttattggtttaaatcattatgggtctatg 5465727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 141
Target Start/End: Complemental strand, 24990989 - 24990922
Alignment:
Q  74 tttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgtt 141  Q
    ||||||||| ||||  ||| ||||||||  ||||||||||||||||| ||||||| |||| |||||||    
T  24990989 tttgaaaatggaacctacataaagtggtgggacatatattgatttcacccaataaaagagcgagtgtt 24990922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 43541954 - 43541895
Alignment:
Q  74 tttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagag 133  Q
    |||||||||||||||||||||||||| |  |||||| |||||||| || |||||| ||||    
T  43541954 tttgaaaattgaactcacacaaagtgatgagacatacattgattttattcaataaaagag 43541895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 10950233 - 10950124
Alignment:
Q  30 taatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataat 129  Q
    ||||||||| ||||||||| |||||||| ||| ||  |||||  ||||||||| |||  || ||||| ||||  |||||| ||||||||||| |||| |     
T  10950233 taatattcattctcttattagtttaaatcattatgagtctatactttgaaaatagaatccatacaaaatggtgggacatacattgatttcattcaatgaa 10950134  T
Q  130 agagtgagtg 139  Q
    ||||| ||||    
T  10950133 agagtaagtg 10950124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 139
Target Start/End: Complemental strand, 24915158 - 24915093
Alignment:
Q  74 tttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtg 139  Q
    ||||||||| |||| |||| ||||||||  ||||||||||||||||| | ||||| |||| |||||    
T  24915158 tttgaaaatggaacccacataaagtggtgggacatatattgatttcacctaataaaagagcgagtg 24915093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 27988 - 27850
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtgg 100  Q
    ||||||||| || |||||||||  || ||||||| |||||||||||||||||||||| ||||||| ||||   |||| |||| |||| ||||||||||||    
T  27988 tagcaacaccctcttttgaacactctctttaatactcactctcttattggtttaaatcattgtgggtctacactttggaaatagaacccacacaaagtgg 27889  T
Q  101 tatgacatatattgatttcatccaataatagagtgagtg 139  Q
    |  |||||| ||||||| |||||||||| || |||||||    
T  27888 tgggacatacattgattccatccaataaaagcgtgagtg 27850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 37 - 142
Target Start/End: Original strand, 26902 - 27007
Alignment:
Q  37 cactctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtga 136  Q
    |||||| |||||||||||||  ||| ||| |||| | |||||||||||||| |||||||||||||   ||||| ||||||||  |||||||| |||||||    
T  26902 cactcttttattggtttaaagcattatgggtctacgctttgaaaattgaacccacacaaagtggtggaacatacattgatttattccaataagagagtga 27001  T
Q  137 gtgtta 142  Q
    ||||||    
T  27002 gtgtta 27007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 9801 - 9697
Alignment:
Q  40 tctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtg 139  Q
    ||||||||| |||||||| ||||||  ||||   ||| |||||||||| |||||||| ||||  || ||| |||||||||||||||||| | ||||||||    
T  9801 tctcttattcgtttaaattattgtgagtctacacttttaaaattgaacccacacaaaatggtgggatatacattgatttcatccaataaaaaagtgagtg 9702  T
Q  140 ttaga 144  Q
    |||||    
T  9701 ttaga 9697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0492 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 11347 - 11243
Alignment:
Q  40 tctcttattggtttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtg 139  Q
    ||||||||| |||||||| ||||||  ||||   ||| |||||||||| |||||||| ||||  || ||| |||||||||||||||||| | ||||||||    
T  11347 tctcttattcgtttaaattattgtgagtctacacttttaaaattgaacccacacaaaatggtgggatatacattgatttcatccaataaaaaagtgagtg 11248  T
Q  140 ttaga 144  Q
    |||||    
T  11247 ttaga 11243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 204712 - 204774
Alignment:
Q  1 tagcaacactcttttttgaacatcctttttaatattcactctcttattggtttaaataattgt 63  Q
    ||||||||||||||||||||||| || | || || ||||||| ||||||||||| ||||||||    
T  204712 tagcaacactcttttttgaacattctctctagtactcactcttttattggtttatataattgt 204774  T

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Target: scaffold0057 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 138
Target Start/End: Original strand, 42933 - 43068
Alignment:
Q  4 caacactcttttttgaacatcctttttaatattcactctcttattgg-tttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggta 102  Q
    |||||||||||||||||  | || ||||||||| ||||| ||||||| ||||||| ||| ||  | |||  ||| ||||||||||| ||||||| ||||     
T  42933 caacactcttttttgaatgttctctttaatattaactcttttattggttttaaatcattttgagtttatacttttaaaattgaacttacacaaaatggtg 43032  T
Q  103 tgacatatattgatttcatccaataatagagtgagt 138  Q
      | |||||||||||| || |||||| | |||||||    
T  43033 gcagatatattgattttattcaataaaaaagtgagt 43068  T

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Target: scaffold0299 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 149
Target Start/End: Original strand, 14178 - 14216
Alignment:
Q  111 attgatttcatccaataatagagtgagtgttagaaagtg 149  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  14178 attgatttcatacaataaaagagtgagtgttagaaagtg 14216  T

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Target: scaffold0838 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 144
Target Start/End: Complemental strand, 2346 - 2255
Alignment:
Q  51 tttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgttaga 144  Q
    ||||||| ||||||||||||  |||| ||||| | || |||||||||| || ||||||| ||||||||||||  |||| |||||||||| ||||    
T  2346 tttaaatcattgtggatctacattttaaaaat-gcac-cacacaaagtagtgtgacatacattgatttcatcttataaaagagtgagtgctaga 2255  T

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Target: scaffold0832 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 144
Target Start/End: Complemental strand, 2377 - 2286
Alignment:
Q  51 tttaaataattgtggatctatgttttgaaaattgaactcacacaaagtggtatgacatatattgatttcatccaataatagagtgagtgttaga 144  Q
    ||||||| ||||||||||||  |||| ||||| | || |||||||||| || ||||||| ||||||||||||  |||| |||||||||| ||||    
T  2377 tttaaatcattgtggatctacattttaaaaat-gcac-cacacaaagtagtgtgacatacattgatttcatcttataaaagagtgagtgctaga 2286  T

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