View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8781_low_34 (Length: 280)
Name: NF8781_low_34
Description: NF8781
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8781_low_34 |
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Alignment Details
Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 20 - 269
Target Start/End: Original strand, 47126630 - 47126882
Alignment:
| Q |
20 |
atgacatggttataaggatccagttaaactttaccttatattgtgttaaaacatatctctactataaagtaaaattcacgttactacaccaacgacattg |
119 |
Q |
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| T |
47126630 |
atgacatagttataaggatccagttaaactttaccttatattgtgttaaaacatatctctactataaagtaaaattcacgttactacaccaacgacattg |
47126729 |
T |
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| Q |
120 |
aatgatttgagctcaaattctactaatatggtcgtataactttatcaaatgataagaaatattttagaaaaatataatgacatt---tagtattctctaa |
216 |
Q |
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| T |
47126730 |
aatgatttgagctcaaattctactaatatggtcgtataactttatcaaatgataagaaatattttagaaaaatttaatgacatttagtagtattctctta |
47126829 |
T |
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| Q |
217 |
aaatttctcgatgtgcatataaagaaaataaaatccttgtgtattgtgttcat |
269 |
Q |
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| T |
47126830 |
aaatttatcgatgtgcatataaagaaaataaaatcattgtgtattgtgttcat |
47126882 |
T |
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