View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8781_low_54 (Length: 221)

Name: NF8781_low_54
Description: NF8781
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8781_low_54
NF8781_low_54
[»] chr5 (30 HSPs)
chr5 (1-157)||(20844395-20844551)
chr5 (1-142)||(20842408-20842549)
chr5 (1-142)||(20845050-20845191)
chr5 (2-112)||(23179474-23179584)
chr5 (1-109)||(20842292-20842400)
chr5 (2-112)||(23179283-23179393)
chr5 (1-112)||(20844687-20844798)
chr5 (2-88)||(23179589-23179675)
chr5 (2-111)||(32672736-32672844)
chr5 (1-112)||(20844931-20845042)
chr5 (2-88)||(32672849-32672935)
chr5 (6-92)||(10037196-10037282)
chr5 (2-92)||(12651299-12651389)
chr5 (2-92)||(23178422-23178512)
chr5 (2-92)||(23180083-23180173)
chr5 (2-92)||(23184351-23184441)
chr5 (2-92)||(34757345-34757435)
chr5 (2-92)||(39874179-39874269)
chr5 (2-99)||(32671989-32672086)
chr5 (67-142)||(20844806-20844881)
chr5 (2-92)||(23178680-23178770)
chr5 (35-99)||(30094369-30094433)
chr5 (33-92)||(3611844-3611903)
chr5 (33-92)||(20109130-20109189)
chr5 (33-92)||(20109898-20109957)
chr5 (34-70)||(3611787-3611823)
chr5 (34-69)||(30094310-30094345)
chr5 (34-70)||(20109073-20109109)
chr5 (34-70)||(20109708-20109744)
chr5 (34-70)||(20109841-20109877)
[»] chr1 (38 HSPs)
chr1 (1-142)||(45507245-45507386)
chr1 (2-112)||(39514199-39514309)
chr1 (2-112)||(35598148-35598258)
chr1 (2-112)||(2052057-2052167)
chr1 (1-112)||(45507394-45507506)
chr1 (2-88)||(2051966-2052052)
chr1 (2-92)||(22194882-22194972)
chr1 (2-92)||(22195052-22195142)
chr1 (2-92)||(36455229-36455319)
chr1 (2-92)||(48647758-48647848)
chr1 (2-92)||(15689394-15689484)
chr1 (2-92)||(48958572-48958662)
chr1 (2-92)||(49791604-49791694)
chr1 (2-92)||(50704593-50704683)
chr1 (21-112)||(35597733-35597823)
chr1 (2-92)||(2585422-2585512)
chr1 (2-92)||(7476031-7476121)
chr1 (2-92)||(7476592-7476682)
chr1 (2-92)||(9530058-9530148)
chr1 (2-92)||(15689232-15689322)
chr1 (2-92)||(42492477-42492567)
chr1 (2-92)||(45507065-45507155)
chr1 (5-92)||(49791883-49791970)
chr1 (2-92)||(2052552-2052642)
chr1 (2-92)||(13929123-13929213)
chr1 (2-88)||(35598057-35598143)
chr1 (2-88)||(35597680-35597765)
chr1 (30-88)||(39514136-39514194)
chr1 (33-92)||(2051777-2051836)
chr1 (33-92)||(36871037-36871096)
chr1 (72-112)||(38211809-38211849)
chr1 (33-92)||(49791079-49791138)
chr1 (33-92)||(49791456-49791515)
chr1 (34-66)||(2051720-2051752)
chr1 (34-66)||(36870980-36871012)
chr1 (34-70)||(49791022-49791058)
chr1 (34-70)||(49791399-49791435)
chr1 (63-106)||(26209958-26210001)
[»] chr3 (51 HSPs)
chr3 (1-142)||(855029-855170)
chr3 (2-112)||(18199286-18199396)
chr3 (2-112)||(36093956-36094066)
chr3 (2-106)||(6953283-6953387)
chr3 (5-106)||(36947859-36947960)
chr3 (6-106)||(36947721-36947821)
chr3 (2-112)||(26943637-26943747)
chr3 (2-88)||(36093865-36093951)
chr3 (2-112)||(36094147-36094257)
chr3 (2-106)||(6953422-6953526)
chr3 (2-106)||(6953665-6953769)
chr3 (6-106)||(6953808-6953907)
chr3 (2-110)||(18256766-18256874)
chr3 (5-88)||(36947998-36948081)
chr3 (2-92)||(31483608-31483698)
chr3 (2-92)||(35713148-35713238)
chr3 (2-92)||(47724559-47724649)
chr3 (5-106)||(36947581-36947682)
chr3 (2-92)||(18199133-18199223)
chr3 (2-92)||(49565985-49566075)
chr3 (2-99)||(43509692-43509789)
chr3 (2-92)||(1883333-1883423)
chr3 (2-92)||(11823961-11824051)
chr3 (6-88)||(18199401-18199483)
chr3 (2-92)||(26943943-26944033)
chr3 (2-88)||(26949097-26949183)
chr3 (20-107)||(52419531-52419618)
chr3 (2-92)||(36094904-36094994)
chr3 (1-60)||(854962-855021)
chr3 (5-92)||(36091001-36091088)
chr3 (2-68)||(6953561-6953627)
chr3 (2-92)||(26943032-26943122)
chr3 (2-92)||(33006047-33006136)
chr3 (2-92)||(35860522-35860612)
chr3 (2-92)||(36095119-36095209)
chr3 (2-67)||(26949027-26949092)
chr3 (2-92)||(851259-851349)
chr3 (2-88)||(38662133-38662219)
chr3 (11-92)||(38662177-38662257)
chr3 (38-92)||(18256681-18256735)
chr3 (35-99)||(16647453-16647517)
chr3 (33-92)||(13458625-13458684)
chr3 (33-92)||(17657182-17657241)
chr3 (33-92)||(4585540-4585599)
chr3 (33-92)||(12257890-12257949)
chr3 (72-112)||(851156-851196)
chr3 (67-112)||(26943828-26943873)
chr3 (34-70)||(4585620-4585656)
chr3 (34-70)||(12257970-12258006)
chr3 (34-70)||(13458568-13458604)
chr3 (34-69)||(16647541-16647576)
[»] chr7 (33 HSPs)
chr7 (5-142)||(13927346-13927481)
chr7 (2-112)||(22004257-22004367)
chr7 (2-108)||(22004452-22004558)
chr7 (2-106)||(29954243-29954347)
chr7 (4-112)||(7891225-7891333)
chr7 (2-102)||(3061577-3061677)
chr7 (2-106)||(31097950-31098054)
chr7 (2-92)||(3600141-3600231)
chr7 (2-88)||(22004563-22004649)
chr7 (7-94)||(5090919-5091006)
chr7 (2-88)||(7891340-7891426)
chr7 (2-92)||(13400683-13400773)
chr7 (2-112)||(13927108-13927217)
chr7 (2-92)||(20959379-20959469)
chr7 (2-92)||(45112720-45112810)
chr7 (2-92)||(5091041-5091131)
chr7 (2-92)||(7890750-7890840)
chr7 (2-92)||(7884946-7885036)
chr7 (2-92)||(22003518-22003608)
chr7 (5-92)||(32656697-32656784)
chr7 (2-92)||(32656797-32656887)
chr7 (24-92)||(7889201-7889269)
chr7 (94-142)||(13927219-13927267)
chr7 (43-106)||(3600053-3600116)
chr7 (37-92)||(26161932-26161987)
chr7 (1-68)||(13927271-13927338)
chr7 (33-92)||(27712706-27712765)
chr7 (34-92)||(32035241-32035299)
chr7 (33-92)||(16719040-16719099)
chr7 (33-92)||(17693250-17693309)
chr7 (34-70)||(16719120-16719156)
chr7 (34-70)||(17693330-17693366)
chr7 (34-70)||(27712786-27712822)
[»] scaffold0160 (3 HSPs)
scaffold0160 (1-142)||(36185-36325)
scaffold0160 (30-142)||(36333-36445)
scaffold0160 (1-112)||(36066-36177)
[»] chr2 (46 HSPs)
chr2 (1-112)||(35433130-35433241)
chr2 (30-142)||(1925514-1925626)
chr2 (30-142)||(35433010-35433122)
chr2 (1-112)||(1925634-1925745)
chr2 (2-112)||(13899842-13899952)
chr2 (2-108)||(13905744-13905850)
chr2 (1-112)||(27999645-27999756)
chr2 (1-112)||(28090379-28090490)
chr2 (1-112)||(28096702-28096813)
chr2 (2-112)||(26453377-26453487)
chr2 (2-112)||(40603213-40603323)
chr2 (5-106)||(32287404-32287505)
chr2 (2-106)||(32287265-32287369)
chr2 (2-90)||(40603325-40603413)
chr2 (2-88)||(13905855-13905941)
chr2 (2-92)||(19640913-19641003)
chr2 (2-92)||(19839506-19839596)
chr2 (2-88)||(26453492-26453578)
chr2 (2-92)||(5001110-5001200)
chr2 (2-92)||(5012780-5012870)
chr2 (2-92)||(26452902-26452992)
chr2 (2-92)||(36440093-36440183)
chr2 (2-92)||(180213-180303)
chr2 (2-92)||(980013-980103)
chr2 (2-92)||(980466-980556)
chr2 (2-92)||(1501797-1501887)
chr2 (2-92)||(2444126-2444216)
chr2 (2-92)||(13899103-13899193)
chr2 (2-92)||(42111658-42111748)
chr2 (2-92)||(14039720-14039810)
chr2 (2-92)||(19641075-19641165)
chr2 (2-92)||(19839668-19839758)
chr2 (2-92)||(40602738-40602828)
chr2 (2-106)||(32287001-32287105)
chr2 (2-92)||(21591174-21591264)
chr2 (23-92)||(204367-204436)
chr2 (5-60)||(32287151-32287206)
chr2 (2-70)||(980261-980329)
chr2 (33-92)||(2296983-2297042)
chr2 (33-92)||(25643744-25643803)
chr2 (33-92)||(6120844-6120903)
chr2 (34-70)||(2297063-2297099)
chr2 (34-70)||(6120924-6120960)
chr2 (34-70)||(25643824-25643860)
chr2 (33-92)||(13900059-13900121)
chr2 (34-70)||(13900142-13900178)
[»] chr4 (38 HSPs)
chr4 (2-112)||(41862204-41862314)
chr4 (2-112)||(22673776-22673886)
chr4 (2-112)||(52680202-52680312)
chr4 (2-112)||(41946721-41946833)
chr4 (2-88)||(41946630-41946716)
chr4 (2-88)||(41861931-41862017)
chr4 (2-88)||(41862022-41862108)
chr4 (2-88)||(41862113-41862199)
chr4 (2-112)||(41862395-41862505)
chr4 (7-94)||(53285648-53285735)
chr4 (2-92)||(16905843-16905933)
chr4 (2-92)||(21380327-21380417)
chr4 (2-92)||(29363835-29363925)
chr4 (2-92)||(35756430-35756520)
chr4 (2-92)||(42345124-42345214)
chr4 (2-92)||(42345245-42345335)
chr4 (2-88)||(52680317-52680403)
chr4 (2-92)||(28380265-28380355)
chr4 (2-92)||(29363507-29363597)
chr4 (2-92)||(29363714-29363804)
chr4 (11-88)||(22673893-22673970)
chr4 (2-92)||(52679748-52679838)
chr4 (2-92)||(53285770-53285860)
chr4 (2-92)||(30390808-30390898)
chr4 (2-92)||(41863144-41863234)
chr4 (9-88)||(41946546-41946625)
chr4 (2-82)||(22673311-22673391)
chr4 (6-68)||(41946484-41946546)
chr4 (33-92)||(14148570-14148629)
chr4 (33-92)||(14148424-14148483)
chr4 (33-92)||(19518506-19518565)
chr4 (33-92)||(21585322-21585381)
chr4 (33-92)||(25819690-25819749)
chr4 (34-70)||(14148513-14148549)
chr4 (34-70)||(19518449-19518485)
chr4 (34-70)||(21585265-21585301)
chr4 (34-70)||(25819770-25819806)
chr4 (62-99)||(52680115-52680152)
[»] scaffold0121 (4 HSPs)
scaffold0121 (2-108)||(41178-41284)
scaffold0121 (2-88)||(41289-41375)
scaffold0121 (2-88)||(41380-41466)
scaffold0121 (2-92)||(40832-40922)
[»] chr6 (9 HSPs)
chr6 (6-112)||(3589233-3589339)
chr6 (2-92)||(2271859-2271949)
chr6 (2-92)||(29371676-29371766)
chr6 (2-99)||(29374228-29374325)
chr6 (2-92)||(24456436-24456526)
chr6 (2-92)||(33049710-33049800)
chr6 (2-92)||(33007275-33007364)
chr6 (33-92)||(29921033-29921092)
chr6 (34-70)||(29921113-29921149)
[»] chr8 (13 HSPs)
chr8 (2-99)||(22732199-22732296)
chr8 (2-99)||(24011201-24011298)
chr8 (2-92)||(18489938-18490028)
chr8 (2-92)||(19958076-19958166)
chr8 (2-92)||(24014105-24014195)
chr8 (2-92)||(37985435-37985525)
chr8 (2-92)||(21637069-21637159)
chr8 (2-75)||(41377801-41377874)
chr8 (34-92)||(18278552-18278610)
chr8 (36-106)||(18489794-18489864)
chr8 (33-92)||(410098-410157)
chr8 (34-70)||(410041-410077)
chr8 (51-92)||(37985586-37985627)
[»] scaffold1113 (1 HSPs)
scaffold1113 (2-92)||(2467-2557)
[»] scaffold0097 (1 HSPs)
scaffold0097 (2-92)||(44623-44713)
[»] scaffold0642 (2 HSPs)
scaffold0642 (33-92)||(310-369)
scaffold0642 (34-70)||(390-426)
[»] scaffold0374 (2 HSPs)
scaffold0374 (33-92)||(107-166)
scaffold0374 (34-70)||(50-86)
[»] scaffold0345 (2 HSPs)
scaffold0345 (33-92)||(10221-10280)
scaffold0345 (34-70)||(10301-10337)
[»] scaffold0105 (2 HSPs)
scaffold0105 (33-92)||(28700-28759)
scaffold0105 (34-70)||(28643-28679)


Alignment Details
Target: chr5 (Bit Score: 141; Significance: 4e-74; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 20844551 - 20844395
Alignment:
Q  1 gtaggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctac 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20844551 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggttaggttttgaaggagggaaaaatggctac 20844452  T
Q  101 aattttttaggtaaaaaatatggcaaaagaaaatatggaaattgtaacgccttagtc 157  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  20844451 aattttttaggtaaaaaatatggcaaaagaaaatatggatattgtaacgctttagtc 20844395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 20842549 - 20842408
Alignment:
Q  1 gtaggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctac 100  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||    
T  20842549 gtaggttttaggaggagggaaattagaaaatcatggttagggtttggaggaggggaattatgaaatatggttatgttttgaatgagggaaaaatggctac 20842450  T
Q  101 aattttttaggtaaaaaatatggcaaaagaaaatatggaaat 142  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  20842449 aattttttaggtaaaaaatatggcaaaagaaaatatggaaat 20842408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 20845191 - 20845050
Alignment:
Q  1 gtaggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctac 100  Q
    |||||||||| |||| ||||||||| |||||||||||||||||||| |||||| |||||| ||||||| | ||||||||||||||||||||| |||| ||    
T  20845191 gtaggttttatgaggagggaaattacgaaatcatggttagggtttgaaggaggagaattaggaaatatagttaggttttgaaggagggaaaagtggccac 20845092  T
Q  101 aattttttaggtaaaaaatatggcaaaagaaaatatggaaat 142  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  20845091 aattttttaggtagaaaatatggcaaaagaaaatatggaaat 20845050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 23179584 - 23179474
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| |    
T  23179584 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctata 23179485  T
Q  102 attttttaggt 112  Q
    |||||||||||    
T  23179484 attttttaggt 23179474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 20842400 - 20842292
Alignment:
Q  1 gtaggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctac 100  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||    
T  20842400 gtaggttttaggagaagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaaatggctac 20842301  T
Q  101 aatttttta 109  Q
    |||||||||    
T  20842300 aatttttta 20842292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 23179393 - 23179283
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| |    
T  23179393 taggttttaggaagagggaaattaggaaatcatggttagggttgggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctata 23179294  T
Q  102 attttttaggt 112  Q
    |||||||||||    
T  23179293 attttttaggt 23179283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 20844798 - 20844687
Alignment:
Q  1 gtaggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctac 100  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||| |||||||||||| | ||    
T  20844798 gtaggttttaggaggaggaaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatcgttaggttttgaatgagggaaaaatgaccac 20844699  T
Q  101 aattttttaggt 112  Q
    ||||||||||||    
T  20844698 aattttttaggt 20844687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 23179675 - 23179589
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggaggg 88  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23179675 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggttaggttttgaaggaggg 23179589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 32672844 - 32672736
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||| ||||||||| ||||||||||||||||| |||||||||| |    
T  32672844 taggttttaggaggagggaaattaggaaatcatagttagggtttggaggaggagaattaggaaatatggttaggttttgaaggaggg-aaaatggctata 32672746  T
Q  102 attttttagg 111  Q
    ||||||||||    
T  32672745 attttttagg 32672736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 20845042 - 20844931
Alignment:
Q  1 gtaggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctac 100  Q
    ||||||||||||||| || ||||||||||||||| |||||||||||||||| |||||||| ||||||| | |||||||||||||||| |||| |||||||    
T  20845042 gtaggttttaggaggaggtaaattaggaaatcatagttagggtttggaggaagggaattaggaaatattgttaggttttgaaggaggaaaaagtggctac 20844943  T
Q  101 aattttttaggt 112  Q
    ||||||||||||    
T  20844942 aattttttaggt 20844931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 32672935 - 32672849
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggaggg 88  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  32672935 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 32672849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 92
Target Start/End: Complemental strand, 10037282 - 10037196
Alignment:
Q  6 ttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||| | ||| ||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  10037282 ttttaggaggagtgaagttaggaaatgatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 10037196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 12651389 - 12651299
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||| || | ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  12651389 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 12651299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 23178512 - 23178422
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||| || | ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  23178512 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 23178422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 23180173 - 23180083
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||| || | ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  23180173 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 23180083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 23184441 - 23184351
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||| || | ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  23184441 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 23184351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 34757435 - 34757345
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||| || | ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  34757435 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 34757345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 39874269 - 39874179
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||| || | ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  39874269 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 39874179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 32672086 - 32671989
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggcta 99  Q
    |||||||||||||| | ||| |||||||||||| ||||||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||| ||||    
T  32672086 taggttttaggaggagtgaagttaggaaatcatagttagggtttggaggagggaaattaggaaatatggttaggttttgatggagggaaaaattgcta 32671989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 20844881 - 20844806
Alignment:
Q  67 atggataggttttgaaggagggaaaaatggctacaattttttaggtaaaaaatatggcaaaagaaaatatggaaat 142  Q
    |||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  20844881 atggttaggttttcaaggagggaaaaatgactacaattttttaggtaaaaaatatggcataagaaaatatggaaat 20844806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 23178770 - 23178680
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||| ||||| ||||||| | |||||||||| ||||||||||    
T  23178770 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggagggaaattaggaaatatagttaggttttgatggagggaaaa 23178680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 30094369 - 30094433
Alignment:
Q  35 ggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggcta 99  Q
    ||||||||||||||||||| |||||| ||||||||| |||||||| |||||||||||||| ||||    
T  30094369 ggttagggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaaattgcta 30094433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 3611844 - 3611903
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  3611844 atggttagggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaa 3611903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 20109130 - 20109189
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  20109130 atggttagggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaa 20109189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 20109898 - 20109957
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  20109898 atggttagggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaa 20109957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 3611787 - 3611823
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    ||||||||||||||||||||||||||| |||||||||    
T  3611787 tggttagggtttggaggaggggaattaggaaatatgg 3611823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 69
Target Start/End: Original strand, 30094310 - 30094345
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatg 69  Q
    ||||||||||||||||||||||||||| ||||||||    
T  30094310 tggttagggtttggaggaggggaattaggaaatatg 30094345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 20109073 - 20109109
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    |||||||||||||||||||||||||||  ||||||||    
T  20109073 tggttagggtttggaggaggggaattagaaaatatgg 20109109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 20109708 - 20109744
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    |||||||||||||||||||||||||||  ||||||||    
T  20109708 tggttagggtttggaggaggggaattagaaaatatgg 20109744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 20109841 - 20109877
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    |||||||||||||||||||||||||||  ||||||||    
T  20109841 tggttagggtttggaggaggggaattagaaaatatgg 20109877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 126; Significance: 4e-65; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 45507245 - 45507386
Alignment:
Q  1 gtaggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctac 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||    
T  45507245 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctac 45507344  T
Q  101 aattttttaggtaaaaaatatggcaaaagaaaatatggaaat 142  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  45507345 aattttttaggtaaaaaatatggcaaaagaaaatatggaaat 45507386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 39514199 - 39514309
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| |    
T  39514199 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctata 39514298  T
Q  102 attttttaggt 112  Q
    |||||||||||    
T  39514299 attttttaggt 39514309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 35598148 - 35598258
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| |    
T  35598148 taggttttagtaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctata 35598247  T
Q  102 attttttaggt 112  Q
    |||||||||||    
T  35598248 attttttaggt 35598258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 2052057 - 2052167
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||| |    
T  2052057 taggttttaagaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaagtggctata 2052156  T
Q  102 attttttaggt 112  Q
    |||||||||||    
T  2052157 attttttaggt 2052167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 45507394 - 45507506
Alignment:
Q  1 gtaggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctac 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||| | ||||||||||||||    
T  45507394 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatagttaggttttgaagaaaggaaaaatggctac 45507493  T
Q  101 aat-tttttaggt 112  Q
    ||| |||||||||    
T  45507494 aatatttttaggt 45507506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 2051966 - 2052052
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggaggg 88  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  2051966 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttaaaggaggg 2052052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 22194972 - 22194882
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  22194972 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 22194882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 22195142 - 22195052
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  22195142 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 22195052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 36455319 - 36455229
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  36455319 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 36455229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 48647848 - 48647758
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  48647848 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 48647758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 15689484 - 15689394
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  15689484 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaa 15689394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 48958662 - 48958572
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||    
T  48958662 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattagggaatatggttaggttttgaaggagggaaaa 48958572  T

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Target: chr1; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 49791604 - 49791694
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||| ||||||| | |||||||||||||||||||||    
T  49791604 taggttttaggaggagggaaattaggaaatcatggttagggtttggaagagaggaattaggaaatatcgttaggttttgaaggagggaaaa 49791694  T

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Target: chr1; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 50704683 - 50704593
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  50704683 taggttttaggaggagtgaagttaggaaatcatggttagagtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 50704593  T

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Target: chr1; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 35597733 - 35597823
Alignment:
Q  21 aattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctacaattttttaggt 112  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||| |||||| ||||||||||||    
T  35597733 aattaggaaat-atggttagggtttggaggaggggaattaggaaatatgattaggttttgaaggagggaaaagtggctataattttttaggt 35597823  T

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Target: chr1; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 2585512 - 2585422
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| ||||||||||||||||||||||| |||||||||||||| | ||||||| |||||||||||||||||||||    
T  2585512 taggttttaggaggagtgaagttaggaaatcatggttagggtttagaggaggggaattagggaatatggttaggttttgaaggagggaaaa 2585422  T

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Target: chr1; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 7476121 - 7476031
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||| || | ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  7476121 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 7476031  T

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Target: chr1; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 7476682 - 7476592
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||| || | ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  7476682 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 7476592  T

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Target: chr1; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 9530148 - 9530058
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||| || | ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  9530148 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 9530058  T

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Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 15689322 - 15689232
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||| |||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  15689322 taggttttaggaggagtgaagttaggaaatcatagttagggtttggaggaggagaattaggaaatatggttaggttttgaaggagggaaaa 15689232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 42492567 - 42492477
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||| || | ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  42492567 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 42492477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 45507065 - 45507155
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| ||||||||||||||||||||||||||||| |||||||| | ||||||| |||||||||||||||||||||    
T  45507065 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaagggaattagggaatatggttaggttttgaaggagggaaaa 45507155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 49791883 - 49791970
Alignment:
Q  5 gttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||| |||||||||| ||||||||||||||||||||| ||| ||||||| ||||||| | |||||||||||||||||||||    
T  49791883 gttttaggaggagggaaattagaaaatcatggttagggtttggaagagaggaattaggaaatatcgttaggttttgaaggagggaaaa 49791970  T

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Target: chr1; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 2052552 - 2052642
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| ||||||||| |||||||||||||||||||||| |||||  |||||||| |||||||||||||||||||||    
T  2052552 taggttttaggaggagtgaagttaggaaattatggttagggtttggaggagggaaattagaaaatatggttaggttttgaaggagggaaaa 2052642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 13929123 - 13929213
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||| | | ||| |||||||||||||||||||||||||||||||||||||  | ||||||| |||||||||||||||||||||    
T  13929123 taggttttaggatgagtgaagttaggaaatcatggttagggtttggaggaggggaatttggtaatatggttaggttttgaaggagggaaaa 13929213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 35598057 - 35598143
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggaggg 88  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||| |||| |||  |||||||||||||||||    
T  35598057 taggttttaggaggaggaaaattaggaaatcatggttagggtttggaggagggaaattaggaaacatgcttaggttttgaaggaggg 35598143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 35597680 - 35597765
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggaggg 88  Q
    |||||||||||||| || |||||||||||||||||||||| ||||||||| |||||||| ||||||||| |||| |||| |||||||    
T  35597680 taggttttaggaggaggaaaattaggaaatcatggttaggatttggagga-gggaattaggaaatatggttagggtttggaggaggg 35597765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 88
Target Start/End: Original strand, 39514136 - 39514194
Alignment:
Q  30 atcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggaggg 88  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  39514136 atcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 39514194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 2051777 - 2051836
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  2051777 atggttagggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaa 2051836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 36871037 - 36871096
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  36871037 atggttagggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaa 36871096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 112
Target Start/End: Original strand, 38211809 - 38211849
Alignment:
Q  72 taggttttgaaggagggaaaaatggctacaattttttaggt 112  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  38211809 taggttttaaaggagggaaaaatggctacaattttttaggt 38211849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 49791079 - 49791138
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||| ||||||||||||| |||||| ||||||||| || ||||| ||||||||||||    
T  49791079 atggttaaggtttggaggaggagaattaggaaatatggttaagttttaaaggagggaaaa 49791138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 49791456 - 49791515
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||| ||||||||||||| |||||| ||||||||| || ||||| ||||||||||||    
T  49791456 atggttaaggtttggaggaggagaattaggaaatatggttaagttttaaaggagggaaaa 49791515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 2051720 - 2051752
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaat 66  Q
    |||||||||||||||||||||||||||||||||    
T  2051720 tggttagggtttggaggaggggaattatgaaat 2051752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 36870980 - 36871012
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaat 66  Q
    |||||||||||||||||||||||||||||||||    
T  36870980 tggttagggtttggaggaggggaattatgaaat 36871012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 49791022 - 49791058
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    ||||||||||||||||||||||||||| |||||||||    
T  49791022 tggttagggtttggaggaggggaattaggaaatatgg 49791058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 49791399 - 49791435
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    ||||||||||||||||||||||||||| |||||||||    
T  49791399 tggttagggtttggaggaggggaattaggaaatatgg 49791435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 26210001 - 26209958
Alignment:
Q  63 aaatatggataggttttgaaggagggaaaaatggctacaatttt 106  Q
    |||||||| |||||||| |||||||||||| |||||||||||||    
T  26210001 aaatatggttaggttttaaaggagggaaaagtggctacaatttt 26209958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 114; Significance: 6e-58; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 855170 - 855029
Alignment:
Q  1 gtaggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctac 100  Q
    ||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||| || ||||    
T  855170 gtaggttttaggaggagggaaattaggaaatcatagttagagtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtgtctac 855071  T
Q  101 aattttttaggtaaaaaatatggcaaaagaaaatatggaaat 142  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  855070 aattttttaggtaaaaaatatggcaaaagaaaatatggaaat 855029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 18199396 - 18199286
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| |    
T  18199396 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctata 18199297  T
Q  102 attttttaggt 112  Q
    |||||||||||    
T  18199296 attttttaggt 18199286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 36093956 - 36094066
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| |    
T  36093956 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctata 36094055  T
Q  102 attttttaggt 112  Q
    |||||||||||    
T  36094056 attttttaggt 36094066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 6953283 - 6953387
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||| ||||    
T  6953283 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggttaca 6953382  T
Q  102 atttt 106  Q
    |||||    
T  6953383 atttt 6953387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 36947859 - 36947960
Alignment:
Q  5 gttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctacaatt 104  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||| |||||||||||    
T  36947859 gttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggtattaggaaatatggttaggttttgaaggagggaaaagtggctacaatt 36947958  T
Q  105 tt 106  Q
    ||    
T  36947959 tt 36947960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 36947721 - 36947821
Alignment:
Q  6 ttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctacaattt 105  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||| ||||||||||||    
T  36947721 ttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggtattaggaaatatggttaggttttgaaggagggaaaagtggctacaattt 36947820  T
Q  106 t 106  Q
    |    
T  36947821 t 36947821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 26943747 - 26943637
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| || ||| |    
T  26943747 taggttttaggaggagggaaattaagaaatcatggttagggtttggaggaggggaattagtaaatatggttaggttttgaaggagggaaaagtgactata 26943648  T
Q  102 attttttaggt 112  Q
    |||||||||||    
T  26943647 attttttaggt 26943637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 36093865 - 36093951
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggaggg 88  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36093865 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggttaggttttgaaggaggg 36093951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 36094147 - 36094257
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||| ||||||| | ||||||||||||||||||||| |||||| |    
T  36094147 taggttttaggaagagggaaattaggaaatcatggttagggttgggaggaggggaattaggaaatattgttaggttttgaaggagggaaaagtggctata 36094246  T
Q  102 attttttaggt 112  Q
    |||||||||||    
T  36094247 attttttaggt 36094257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 6953422 - 6953526
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||| ||| ||||    
T  6953422 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttaagggagggaaaagtggttaca 6953521  T
Q  102 atttt 106  Q
    |||||    
T  6953522 atttt 6953526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 6953665 - 6953769
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||| ||| ||||    
T  6953665 taggttttaacaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatagttaggttttgaaggagggaaaagtggttaca 6953764  T
Q  102 atttt 106  Q
    |||||    
T  6953765 atttt 6953769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 106
Target Start/End: Original strand, 6953808 - 6953907
Alignment:
Q  6 ttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctacaattt 105  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||| | ||||||||||    
T  6953808 ttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttagattttgaaggagggaaaagt-gctacaattt 6953906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 18256766 - 18256874
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||||||| | ||| |||| ||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| || |||||    
T  18256766 taggttttaggaggagtgaagttagaaaatcatagttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtgactaca 18256865  T
Q  102 attttttag 110  Q
    |||||||||    
T  18256866 attttttag 18256874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 36947998 - 36948081
Alignment:
Q  5 gttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggaggg 88  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  36947998 gttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 36948081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 31483698 - 31483608
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  31483698 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 31483608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 35713238 - 35713148
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  35713238 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 35713148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 47724649 - 47724559
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  47724649 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 47724559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 36947581 - 36947682
Alignment:
Q  5 gttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctacaatt 104  Q
    ||||||||||| |||||||||  ||||||| ||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||| |||||||||||    
T  36947581 gttttaggaggagggaaattaaaaaatcatagttagggtttggaggaggggaatttggaaatatggttaggttttgaaggagggaaaagtggctacaatt 36947680  T
Q  105 tt 106  Q
    ||    
T  36947681 tt 36947682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 18199133 - 18199223
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||    
T  18199133 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaa 18199223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 49565985 - 49566075
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  49565985 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggagggaaattaggaaatatggttaggttttgaaggagggaaaa 49566075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 43509692 - 43509789
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggcta 99  Q
    |||||||||||||| | ||| |||||||||||||||| ||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||| ||||    
T  43509692 taggttttaggaggagtgaagttaggaaatcatggttggggtttggaggagggaaattaggaaatatggttaggttttgaaggagggaaaaattgcta 43509789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 1883333 - 1883423
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||| ||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||    
T  1883333 taggttttaggaggagtgaagttaggaaatcatagttagggtttggaggaggggaattagggaatatggttaggttttgaaggagggaaaa 1883423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 11824051 - 11823961
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||| |||| | ||| ||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  11824051 taggttttatgaggagtgaagttaggaaatcatggttagggtttggagaaggggaattaggaaatatggttaggttttgaaggagggaaaa 11823961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 18199483 - 18199401
Alignment:
Q  6 ttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggaggg 88  Q
    |||||||||| || |||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  18199483 ttttaggaggaggaaaattaagaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 18199401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 26944033 - 26943943
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||| || | ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  26944033 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 26943943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 26949183 - 26949097
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggaggg 88  Q
    |||||||||||| | |||||||||||||||||||||||| ||||||||||||||| ||| ||||||||| |||||||||||||||||    
T  26949183 taggttttaggaagagggaaattaggaaatcatggttagagtttggaggaggggagttaggaaatatggttaggttttgaaggaggg 26949097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 52419531 - 52419618
Alignment:
Q  20 aaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctacaattttt 107  Q
    |||||||||||||||||||||| ||||||| ||||||||||  |||||||| ||||||||||||||||||||| ||||||| ||||||    
T  52419531 aaattaggaaatcatggttaggatttggagaaggggaattagaaaatatggttaggttttgaaggagggaaaagtggctacgattttt 52419618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 36094904 - 36094994
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||| ||||| ||||||| | |||||||||| ||||||||||    
T  36094904 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggagggaaattaggaaatatagttaggttttgatggagggaaaa 36094994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 855021 - 854962
Alignment:
Q  1 gtaggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaatta 60  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  855021 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaatta 854962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 36091001 - 36091088
Alignment:
Q  5 gttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||| | ||| |||||||||||||||||||||||||||||| |||| || | ||||||| |||||||||||||||||||||    
T  36091001 gttttaggaggagtgaagttaggaaatcatggttagggtttggaggagaggaactagggaatatggttaggttttgaaggagggaaaa 36091088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 6953561 - 6953627
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatat 68  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  6953561 taggttttaggaggagggaaattagaaaatcatggttagggtttggaggaggggaattaggaaatat 6953627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 26943122 - 26943032
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||| ||||||||| | ||| |||| ||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| ||||||||||    
T  26943122 taggctttaggaggagtgaagttagaaaatcatggttagggtttggaggagggaaattaggaaatatggttaggttttgatggagggaaaa 26943032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 33006047 - 33006136
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||| ||||| | ||| ||||||||| |||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||    
T  33006047 taggttttcggaggagtgaagttaggaaatgatggttagggtttggaggaggggaattaggaaata-ggttaggttttgaaggagggaaaa 33006136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 35860522 - 35860612
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||| |||||||||| || ||||| ||||||||| |||||||| ||||||||||||    
T  35860522 taggttttaggaggagtgaagttaggaaatcatggttagcgtttggaggaaggaaattaggaaatatggttaggttttaaaggagggaaaa 35860612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 36095119 - 36095209
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||| |||||||||| || ||||| ||||||||| |||||||| ||||||||||||    
T  36095119 taggttttaggaggagtgaagttaggaaatcatggttagcgtttggaggaaggaaattaggaaatatggttaggttttaaaggagggaaaa 36095209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 26949092 - 26949027
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaata 67  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  26949092 taggttttaggaggagggaaattagaaaatcatggttagggtttggaggatgggaattatgaaata 26949027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 851349 - 851259
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||| |||| |||||||| |||||||||||||||||||   ||||||| |||||||||||||||||||||    
T  851349 taggttttaggaggagtgaagttagcaaattatggttagagtttggaggaggggaattagagaatatggttaggttttgaaggagggaaaa 851259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 38662133 - 38662219
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggaggg 88  Q
    |||||||||||||| | ||| |||| ||||||| |||| |||||||||||||||||||| ||||||||| ||||||||| |||||||    
T  38662133 taggttttaggaggagtgaagttagaaaatcattgttatggtttggaggaggggaattaggaaatatggttaggttttggaggaggg 38662219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 38662177 - 38662257
Alignment:
Q  11 ggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||| ||| ||||||||||| ||||||||| |||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  38662177 ggaggaggggaattaggaaat-atggttaggttttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaa 38662257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 18256681 - 18256735
Alignment:
Q  38 tagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  18256681 tagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 18256735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 35 - 99
Target Start/End: Complemental strand, 16647517 - 16647453
Alignment:
Q  35 ggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggcta 99  Q
    ||||||||||||||||||| |||||| ||||||||| |||||||| |||||||||||||| ||||    
T  16647517 ggttagggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaaattgcta 16647453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 13458625 - 13458684
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  13458625 atggttagggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaa 13458684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 17657241 - 17657182
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  17657241 atggttagggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaa 17657182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 4585599 - 4585540
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||| ||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  4585599 atggttaaggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaa 4585540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 12257949 - 12257890
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||| ||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  12257949 atggttaaggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaa 12257890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 851196 - 851156
Alignment:
Q  72 taggttttgaaggagggaaaaatggctacaattttttaggt 112  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  851196 taggttttgaaggagggaaaagtggctacaattttttaggt 851156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 112
Target Start/End: Complemental strand, 26943873 - 26943828
Alignment:
Q  67 atggataggttttgaaggagggaaaaatggctacaattttttaggt 112  Q
    |||| ||||||||||||||||||||| |||||| ||||||||||||    
T  26943873 atgggtaggttttgaaggagggaaaagtggctataattttttaggt 26943828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 4585656 - 4585620
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    ||||||||||||||||||||||||||| |||||||||    
T  4585656 tggttagggtttggaggaggggaattaggaaatatgg 4585620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 12258006 - 12257970
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    ||||||||||||||||||||||||||| |||||||||    
T  12258006 tggttagggtttggaggaggggaattaggaaatatgg 12257970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 13458568 - 13458604
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    ||||||||||||||||||||||||||| |||||||||    
T  13458568 tggttagggtttggaggaggggaattaggaaatatgg 13458604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 69
Target Start/End: Complemental strand, 16647576 - 16647541
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatg 69  Q
    ||||||||||||||||||||||||||| ||||||||    
T  16647576 tggttagggtttggaggaggggaattaggaaatatg 16647541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 8e-54; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 13927481 - 13927346
Alignment:
Q  5 gttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctacaatt 104  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||  ||||||| |||| ||||||    
T  13927481 gttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaag--gggaaaagtggcaacaatt 13927384  T
Q  105 ttttaggtaaaaaatatggcaaaagaaaatatggaaat 142  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13927383 ttttaggtaaaaaatatggcaaaagaaaatatggaaat 13927346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 22004367 - 22004257
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||| |||||| |    
T  22004367 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggagggtaattaggaaatatggttaggttttgaaggagggaaaagtggctata 22004268  T
Q  102 attttttaggt 112  Q
    |||||||||||    
T  22004267 attttttaggt 22004257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 22004558 - 22004452
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| |    
T  22004558 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctata 22004459  T
Q  102 atttttt 108  Q
    |||||||    
T  22004458 atttttt 22004452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 29954347 - 29954243
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||    
T  29954347 taggttttaggaggagggaaattaggagatcatggttagggtttggaggaggggagttatgaaatatggttaggttttgaaggagggaaaagtggctaca 29954248  T
Q  102 atttt 106  Q
    |||||    
T  29954247 atttt 29954243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 7891333 - 7891225
Alignment:
Q  4 ggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctacaat 103  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||| |||| |||    
T  7891333 ggttttaagaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaaatagctataat 7891234  T
Q  104 tttttaggt 112  Q
    |||||||||    
T  7891233 tttttaggt 7891225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 3061577 - 3061677
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||| ||||||||    
T  3061577 taggttttaggaggagggaaattaggagatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggaaaaagtggctaca 3061676  T
Q  102 a 102  Q
    |    
T  3061677 a 3061677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 31098054 - 31097950
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||||||| |||||||||||| ||||| ||||||||||||||||||||| ||| ||||||||| |||||||||||||||| |||||||||||||    
T  31098054 taggttttaggaggagggaaattaggagatcatagttagggtttggaggaggggagttaagaaatatggttaggttttgaaggaggaaaaaatggctaca 31097955  T
Q  102 atttt 106  Q
    |||||    
T  31097954 atttt 31097950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 3600141 - 3600231
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||    
T  3600141 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatcgttaggttttgaaggagggaaaa 3600231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 22004649 - 22004563
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggaggg 88  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  22004649 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 22004563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 5091006 - 5090919
Alignment:
Q  7 tttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaat 94  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  5091006 tttaggaggagtgaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaaat 5090919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 7891426 - 7891340
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggaggg 88  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  7891426 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttaaaggaggg 7891340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 13400683 - 13400773
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  13400683 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 13400773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 13927217 - 13927108
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||| ||| ||||||||||||||||||||||| |||||||||||||| ||||| ||||||| | ||||||||||||||||| ||| ||||||||    
T  13927217 taggttttagcaggagggaaattaggaaatcatggttaaggtttggaggagggaaattaggaaatatagttaggttttgaaggaggg-aaagtggctaca 13927119  T
Q  102 attttttaggt 112  Q
    |||||||||||    
T  13927118 attttttaggt 13927108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 20959379 - 20959469
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  20959379 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 20959469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 45112810 - 45112720
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  45112810 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 45112720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 5091131 - 5091041
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||    
T  5091131 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggaaaaa 5091041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 7890840 - 7890750
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  7890840 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggagggaaattaggaaatatggttaggttttgaaggagggaaaa 7890750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 7885036 - 7884946
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||| || | ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  7885036 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 7884946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 22003608 - 22003518
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| ||||||||||    
T  22003608 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggagggaaattaggaaatatggttaggttttgatggagggaaaa 22003518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 92
Target Start/End: Complemental strand, 32656784 - 32656697
Alignment:
Q  5 gttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||| | ||| ||||||||||||||||||||||||||||||| |||||| | ||||||| |||||||||||||||||||||    
T  32656784 gttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggtgaattagggaatatggttaggttttgaaggagggaaaa 32656697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 32656887 - 32656797
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| ||||||||||||||||||||||||||||||| |||||| | ||||||| ||||||||||| |||||||||    
T  32656887 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggtgaattagggaatatggttaggttttgaatgagggaaaa 32656797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 7889201 - 7889269
Alignment:
Q  24 taggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||    
T  7889201 taggaaatcatggttagggtttggaggaggggaattagggaatatggttaggttttgaaggagggaaaa 7889269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 13927267 - 13927219
Alignment:
Q  94 tggctacaattttttaggtaaaaaatatggcaaaagaaaatatggaaat 142  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13927267 tggctacaattttttaggtaaaaaatatggcaaaagaaaatatggaaat 13927219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 3600053 - 3600116
Alignment:
Q  43 tttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctacaatttt 106  Q
    |||||||||||||||||| ||||||||| |||||||||||||| |||||| |||||||||||||    
T  3600053 tttggaggaggggaattaggaaatatggttaggttttgaaggaaggaaaagtggctacaatttt 3600116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 26161987 - 26161932
Alignment:
Q  37 ttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  26161987 ttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 26161932  T

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Target: chr7; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 13927338 - 13927271
Alignment:
Q  1 gtaggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatat 68  Q
    ||||||||||| | | ||||||||||||||||||||||| |||||||||||||| ||||| |||||||    
T  13927338 gtaggttttagcatgagggaaattaggaaatcatggttaaggtttggaggagggaaattaggaaatat 13927271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 27712765 - 27712706
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  27712765 atggttagggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaa 27712706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 32035299 - 32035241
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||| ||||||||||||||||||||||   ||||||| |||||||||||||||||||||    
T  32035299 tggtgagggtttggaggaggggaattagagaatatggttaggttttgaaggagggaaaa 32035241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 16719099 - 16719040
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||| ||||||||||||| |||||| ||||||||| |||||||| || |||||||||    
T  16719099 atggttaaggtttggaggaggagaattaggaaatatggttaggttttaaatgagggaaaa 16719040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 17693309 - 17693250
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||| ||||||||||||| |||||| ||||||||| |||||||| || |||||||||    
T  17693309 atggttaaggtttggaggaggagaattaggaaatatggttaggttttaaatgagggaaaa 17693250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 16719156 - 16719120
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    ||||||||||||||||||||||||||| |||||||||    
T  16719156 tggttagggtttggaggaggggaattaggaaatatgg 16719120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 17693366 - 17693330
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    ||||||||||||||||||||||||||| |||||||||    
T  17693366 tggttagggtttggaggaggggaattaggaaatatgg 17693330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 27712822 - 27712786
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    ||||||||||||||||||||||||||| |||||||||    
T  27712822 tggttagggtttggaggaggggaattaggaaatatgg 27712786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 106; Significance: 3e-53; HSPs: 3)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 36325 - 36185
Alignment:
Q  1 gtaggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctac 100  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||| |||||||||||| ||| |||    
T  36325 gtaggttttaggaggagggaaattaggaaatcatggttagg-tttggaggaggggaattaggaaatatggttaggttttaaaggagggaaaagtgggtac 36227  T
Q  101 aattttttaggtaaaaaatatggcaaaagaaaatatggaaat 142  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  36226 aattttttaggtaaaaaatatggcaaaagaaaagatggaaat 36185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 30 - 142
Target Start/End: Complemental strand, 36445 - 36333
Alignment:
Q  30 atcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctacaattttttaggtaaaaaatatggcaaaag 129  Q
    ||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36445 atcatggttagggtttggaggaggggaattaggatatatggttaggttttgaaggagggaaaagtggctacaattttttaggtaaaaaatatggcaaaag 36346  T
Q  130 aaaatatggaaat 142  Q
    |||||||| ||||    
T  36345 aaaatatgaaaat 36333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #3
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 36177 - 36066
Alignment:
Q  1 gtaggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctac 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||| |||||||    
T  36177 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggatgggaattaggaaatatggttaggttttgaaggagggaaaagtggctac 36078  T
Q  101 aattttttaggt 112  Q
    ||||||||||||    
T  36077 aattttttaggt 36066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 7e-45; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 35433130 - 35433241
Alignment:
Q  1 gtaggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctac 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||    
T  35433130 gtaggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaagaaatatggttaggttttgaaggagggaaaagtggctac 35433229  T
Q  101 aattttttaggt 112  Q
    || |||||||||    
T  35433230 aactttttaggt 35433241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 30 - 142
Target Start/End: Original strand, 1925514 - 1925626
Alignment:
Q  30 atcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctacaattttttaggtaaaaaatatggcaaaag 129  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||    
T  1925514 atcatggttagggtttggagaaggggaattaggaaatatggttaggttttgaaggagagaaaagtggctacaattttttaggtaaaaaatatggaaaaag 1925613  T
Q  130 aaaatatggaaat 142  Q
    |||||||||||||    
T  1925614 aaaatatggaaat 1925626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 30 - 142
Target Start/End: Original strand, 35433010 - 35433122
Alignment:
Q  30 atcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctacaattttttaggtaaaaaatatggcaaaag 129  Q
    ||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  35433010 atcatggttagagtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctacaatattttaggtaaaaaatatggcaaaag 35433109  T
Q  130 aaaatatggaaat 142  Q
    |||||||| ||||    
T  35433110 aaaatatgaaaat 35433122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 1925634 - 1925745
Alignment:
Q  1 gtaggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctac 100  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |  ||||    
T  1925634 gtaggttttaggaggagggaaattaggaaataatggttagggtttggaggaggggaattatgaaatatggttaggttttgaaggagggaaaagtatctac 1925733  T
Q  101 aattttttaggt 112  Q
    ||||||||||||    
T  1925734 aattttttaggt 1925745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 13899952 - 13899842
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||| |||||| |    
T  13899952 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggagggtaattaggaaatatggttaggttttgaaggagggaaaagtggctata 13899853  T
Q  102 attttttaggt 112  Q
    |||||||||||    
T  13899852 attttttaggt 13899842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 13905850 - 13905744
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| |    
T  13905850 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctata 13905751  T
Q  102 atttttt 108  Q
    |||||||    
T  13905750 atttttt 13905744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 27999645 - 27999756
Alignment:
Q  1 gtaggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctac 100  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||| |||||||    
T  27999645 gtaggttttaggatgagggaaattaggaaatcatgattagggtttggaggaggggaatcatgaaatatggttaggttatgaaggagggaaaagtggctac 27999744  T
Q  101 aattttttaggt 112  Q
    ||||||||||||    
T  27999745 aattttttaggt 27999756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 28090379 - 28090490
Alignment:
Q  1 gtaggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctac 100  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||| |||||||    
T  28090379 gtaggttttaggatgagggaaattaggaaatcatgattagggtttggaggaggggaatcatgaaatatggttaggttatgaaggagggaaaagtggctac 28090478  T
Q  101 aattttttaggt 112  Q
    ||||||||||||    
T  28090479 aattttttaggt 28090490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 28096702 - 28096813
Alignment:
Q  1 gtaggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctac 100  Q
    ||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||||||||||| |||||||    
T  28096702 gtaggttttaggatgagggaaattaggaaatcatgattagggtttggaggaggggaatcatgaaatatggttaggttatgaaggagggaaaagtggctac 28096801  T
Q  101 aattttttaggt 112  Q
    ||||||||||||    
T  28096802 aattttttaggt 28096813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 26453487 - 26453377
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||| |    
T  26453487 taggttttaagaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaagtggctata 26453388  T
Q  102 attttttaggt 112  Q
    |||||||||||    
T  26453387 attttttaggt 26453377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 40603323 - 40603213
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||| |    
T  40603323 taggttttaagaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaagtggctata 40603224  T
Q  102 attttttaggt 112  Q
    |||||||||||    
T  40603223 attttttaggt 40603213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 32287505 - 32287404
Alignment:
Q  5 gttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctacaatt 104  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||| ||| |||||||    
T  32287505 gttttaggaggagggaaattaggagatcatggttagggtttggaggaggggaattaggaaatatgattaggttttgaaggagggaaaagtggttacaatt 32287406  T
Q  105 tt 106  Q
    ||    
T  32287405 tt 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 32287369 - 32287265
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||  || ||||    
T  32287369 taggttttaggaggatggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatagttaggttttgaaggagggaaaaggggttaca 32287270  T
Q  102 atttt 106  Q
    |||||    
T  32287269 atttt 32287265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 40603413 - 40603325
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaa 90  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||    
T  40603413 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttaaaggagggaa 40603325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 13905941 - 13905855
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggaggg 88  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  13905941 taggttttaggaggagggaaattaggaaatgatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 13905855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 19641003 - 19640913
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  19641003 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 19640913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 19839596 - 19839506
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  19839596 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 19839506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 26453578 - 26453492
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggaggg 88  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  26453578 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttaaaggaggg 26453492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 5001110 - 5001200
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||    
T  5001110 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaataaggttaggttttgaaggagggaaaa 5001200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 5012780 - 5012870
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||    
T  5012780 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaataaggttaggttttgaaggagggaaaa 5012870  T

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Target: chr2; HSP #21
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 26452992 - 26452902
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  26452992 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggagggaaattaggaaatatggttaggttttgaaggagggaaaa 26452902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 36440093 - 36440183
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||    
T  36440093 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatagttaggttttgaaggagggaaaa 36440183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 180303 - 180213
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||| || | ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  180303 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 180213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 980013 - 980103
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||| || | ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  980013 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 980103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 980466 - 980556
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||| || | ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  980466 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 980556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 1501887 - 1501797
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||| ||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  1501887 taggttttaggaggagtgaagttagaaaatcattgttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 1501797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 2444216 - 2444126
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||| || | ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  2444216 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 2444126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 13899193 - 13899103
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| ||||||||||    
T  13899193 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggagggaaattaggaaatatggttaggttttgatggagggaaaa 13899103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 42111658 - 42111748
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| ||||||||| ||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||    
T  42111658 taggttttaggaggagtgaagttaggaaatgatggttagggtttggaggaggggaattagaaaatatggttaggttttgaaggagggaaaa 42111748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 14039810 - 14039720
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||| ||||||||||||||||||| ||||| ||||||||| |||||||||| ||||||||||    
T  14039810 taggttttaggaggagtgaagttaggaaatcattgttagggtttggaggagggaaattaggaaatatggttaggttttgatggagggaaaa 14039720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 19641165 - 19641075
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||| |||| | ||| |||||||||||||| ||||||||||||||||||||||| ||||||| | |||||||||||||||||||||    
T  19641165 taggttttatgaggagtgaagttaggaaatcatggctagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaa 19641075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 19839758 - 19839668
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||| |||| | ||| |||||||||||||| ||||||||||||||||||||||| ||||||| | |||||||||||||||||||||    
T  19839758 taggttttatgaggagtgaagttaggaaatcatggctagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaa 19839668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 40602828 - 40602738
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||| |||||  |||||||| ||| |||||||||||||||||    
T  40602828 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggagggaaattagaaaatatggttagattttgaaggagggaaaa 40602738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 32287105 - 32287001
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||| | ||||| | | |||||||| |||||||||||| ||  ||||    
T  32287105 taggttttaggaggagggaaattagaaaatcatggttagggtttggaggagaggaatcaggaaatgtagttaggttttaaaggagggaaaagtgattaca 32287006  T
Q  102 atttt 106  Q
    |||||    
T  32287005 atttt 32287001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 21591174 - 21591264
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| ||||||||||||||||||| |||| |||||||||||||   ||||||| |||||||||||||||||||||    
T  21591174 taggttttaggaggagtgaagttaggaaatcatggttaggctttgaaggaggggaattagagaatatggttaggttttgaaggagggaaaa 21591264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 92
Target Start/End: Complemental strand, 204436 - 204367
Alignment:
Q  23 ttaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||| |||||||||||||||||||||    
T  204436 ttaggaaatcatggttagggtttggaggaggtgaattagggaatatggttaggttttgaaggagggaaaa 204367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 32287206 - 32287151
Alignment:
Q  5 gttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaatta 60  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  32287206 gttttaggaggagggaaattaggaaatcatggttaaggtttggaggaggggaatta 32287151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 980261 - 980329
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatgg 70  Q
    ||||||||||| || | ||| ||||||||||||||||||||||| |||||||||||||| |||||||||    
T  980261 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatgg 980329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 2297042 - 2296983
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||| ||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  2297042 atggttaaggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaa 2296983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 25643803 - 25643744
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||| ||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  25643803 atggttaaggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaa 25643744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 6120903 - 6120844
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||| ||||||||||||| ||||||  |||||||| |||||||| ||||||||||||    
T  6120903 atggttaaggtttggaggaggagaattagaaaatatggttaggttttaaaggagggaaaa 6120844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 2297099 - 2297063
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    ||||||||||||||||||||||||||| |||||||||    
T  2297099 tggttagggtttggaggaggggaattaggaaatatgg 2297063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 6120960 - 6120924
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    ||||||||||||||||||||||||||| |||||||||    
T  6120960 tggttagggtttggaggaggggaattaggaaatatgg 6120924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 25643860 - 25643824
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    ||||||||||||||||||||||||||| |||||||||    
T  25643860 tggttagggtttggaggaggggaattaggaaatatgg 25643824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 13900121 - 13900059
Alignment:
Q  33 atggttagggtttggag---gaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||||||   |||| |||||| ||||||||| |||||||| ||||| ||||||    
T  13900121 atggttagggtttggaggaggaggagaattaggaaatatggttaggttttaaaggatggaaaa 13900059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 13900178 - 13900142
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    |||||||||||||||||||||||||||  ||||||||    
T  13900178 tggttagggtttggaggaggggaattagaaaatatgg 13900142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 3e-44; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 41862204 - 41862314
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| |    
T  41862204 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctata 41862303  T
Q  102 attttttaggt 112  Q
    |||||||||||    
T  41862304 attttttaggt 41862314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 22673886 - 22673776
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| |    
T  22673886 taggttttaggaggagggaaattaggaaattatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctata 22673787  T
Q  102 attttttaggt 112  Q
    |||||||||||    
T  22673786 attttttaggt 22673776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 52680312 - 52680202
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||| |    
T  52680312 taggttttaagaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagagaaaagtggctata 52680213  T
Q  102 attttttaggt 112  Q
    |||||||||||    
T  52680212 attttttaggt 52680202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 41946721 - 41946833
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaa--atatggataggttttgaaggagggaaaaatggcta 99  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||  |||||| ||||||||||||||||||||| ||||||    
T  41946721 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatatggttaggttttgaaggagggaaaagtggcta 41946820  T
Q  100 caattttttaggt 112  Q
     ||||||||||||    
T  41946821 taattttttaggt 41946833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 41946630 - 41946716
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggaggg 88  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  41946630 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggttaggttttgaaggaggg 41946716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 41861931 - 41862017
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggaggg 88  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  41861931 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 41862017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 41862022 - 41862108
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggaggg 88  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  41862022 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 41862108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 41862113 - 41862199
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggaggg 88  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  41862113 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 41862199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 41862395 - 41862505
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||  |||||||| ||||||||||| ||||| ||| |||||| |    
T  41862395 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaaatagaaaatatggttaggttttgaaagagggtaaagtggctata 41862494  T
Q  102 attttttaggt 112  Q
    |||||||||||    
T  41862495 attttttaggt 41862505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 53285735 - 53285648
Alignment:
Q  7 tttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaat 94  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  53285735 tttaggaggagtgaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaaat 53285648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 16905933 - 16905843
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  16905933 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 16905843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 21380417 - 21380327
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  21380417 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 21380327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 29363835 - 29363925
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  29363835 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 29363925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 35756520 - 35756430
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  35756520 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 35756430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 42345214 - 42345124
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  42345214 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 42345124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 42345335 - 42345245
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  42345335 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 42345245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 52680403 - 52680317
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggaggg 88  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  52680403 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttaaaggaggg 52680317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 28380355 - 28380265
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||    
T  28380355 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggggggaaaa 28380265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 29363507 - 29363597
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||    
T  29363507 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttagattttgaaggagggaaaa 29363597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 29363714 - 29363804
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||    
T  29363714 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggatggaaaa 29363804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 22673970 - 22673893
Alignment:
Q  11 ggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggaggg 88  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  22673970 ggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggaggg 22673893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 52679838 - 52679748
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||| |||||    
T  52679838 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggagggaaattaggaaatatggttaggttttgaaggagagaaaa 52679748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 53285860 - 53285770
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| ||||    
T  53285860 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttagattttgaaggaggaaaaa 53285770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 30390808 - 30390898
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||| |||||||||||||||||| |||||| | ||||||| |||||||||||||||||||||    
T  30390808 taggttttaggaggagtgaagttaggaaatcatagttagggtttggaggaggtgaattagggaatatggttaggttttgaaggagggaaaa 30390898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 41863144 - 41863234
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||| ||||| ||||||| | |||||||||| ||||||||||    
T  41863144 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggagggaaattaggaaatatagttaggttttgatggagggaaaa 41863234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 41946546 - 41946625
Alignment:
Q  9 taggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggaggg 88  Q
    ||||||| || |||||| |||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||    
T  41946546 taggaggaggaaaattaagaaatcatggttagggtttggaggaggggaattaggaaatatagttaggttttgaaggaggg 41946625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 82
Target Start/End: Complemental strand, 22673391 - 22673311
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaa 82  Q
    |||||||||||||| | ||| ||||||||||||||||| |||||||||||||| ||||| ||||||||| |||||||||||    
T  22673391 taggttttaggaggagtgaagttaggaaatcatggttaaggtttggaggagggaaattaggaaatatggttaggttttgaa 22673311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 41946484 - 41946546
Alignment:
Q  6 ttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatat 68  Q
    |||||||||| || |||||| |||||||||||||||||||||||||||||||||| |||||||    
T  41946484 ttttaggaggaggaaaattaagaaatcatggttagggtttggaggaggggaattaggaaatat 41946546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 14148570 - 14148629
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  14148570 atggttagggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaa 14148629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 14148424 - 14148483
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||||||||||||| |||||| ||||||||| |||||||| |||||| |||||    
T  14148424 atggttagggtttggaggaggagaattaggaaatatggttaggttttaaaggagagaaaa 14148483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 19518506 - 19518565
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||| ||||||||||||| |||||| ||||||||| |||||||| || |||||||||    
T  19518506 atggttaaggtttggaggaggagaattaggaaatatggttaggttttaaatgagggaaaa 19518565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 21585322 - 21585381
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||| ||||||||||||| |||||| ||||||||| |||||||| || |||||||||    
T  21585322 atggttaaggtttggaggaggagaattaggaaatatggttaggttttaaatgagggaaaa 21585381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 25819749 - 25819690
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||| ||||||||||||| |||||| ||||||||| || ||||| ||||||||||||    
T  25819749 atggttaaggtttggaggaggagaattaggaaatatggttatgttttaaaggagggaaaa 25819690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 14148513 - 14148549
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    ||||||||||||||||||||||||||| |||||||||    
T  14148513 tggttagggtttggaggaggggaattaggaaatatgg 14148549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 19518449 - 19518485
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    ||||||||||||||||||||||||||| |||||||||    
T  19518449 tggttagggtttggaggaggggaattaggaaatatgg 19518485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 21585265 - 21585301
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    ||||||||||||||||||||||||||| |||||||||    
T  21585265 tggttagggtttggaggaggggaattaggaaatatgg 21585301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 25819806 - 25819770
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    ||||||||||||||||||||||||||| |||||||||    
T  25819806 tggttagggtttggaggaggggaattaggaaatatgg 25819770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 52680152 - 52680115
Alignment:
Q  62 gaaatatggataggttttgaaggagggaaaaatggcta 99  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  52680152 gaaatatggttaggttttgaaggagggaaaaattgcta 52680115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 87; Significance: 7e-42; HSPs: 4)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 41284 - 41178
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctaca 101  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| |    
T  41284 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaagtggctata 41185  T
Q  102 atttttt 108  Q
    |||||||    
T  41184 atttttt 41178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 41375 - 41289
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggaggg 88  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  41375 taggttttaggaggagggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggttaggttttgaaggaggg 41289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 41466 - 41380
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggaggg 88  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||    
T  41466 taggttttaggaggatggaaattaggaaatcatggttagggtttggaggaggggaattagaaaatatggttaggttttgaaggaggg 41380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 40922 - 40832
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | | | |||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| ||||||||||    
T  40922 taggttttaggaggagtggagttaggaaatcatggttagggtttggaggagggaaattaggaaatatggttaggttttgatggagggaaaa 40832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 112
Target Start/End: Complemental strand, 3589339 - 3589233
Alignment:
Q  6 ttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctacaattt 105  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||| |||||    
T  3589339 ttttaggaggaggaaaattaggaaatcatggttagggtttggaggaggggaattagaaaatatggttaggttttgaaggagggaaaaatggctataattt 3589240  T
Q  106 tttaggt 112  Q
    |||||||    
T  3589239 tttaggt 3589233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 2271949 - 2271859
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  2271949 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 2271859  T

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Target: chr6; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 29371676 - 29371766
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||    
T  29371676 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttagattttgaaggagggaaaa 29371766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 29374228 - 29374325
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggcta 99  Q
    |||||||||||||| | ||| ||||||||  |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||    
T  29374228 taggttttaggaggagtgaagttaggaaacgatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaaattgcta 29374325  T

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Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 24456526 - 24456436
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||| |||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  24456526 taggttttaggaggagtgaagttaggaaatcatagttagggtttggaggaggagaattaggaaatatggttaggttttgaaggagggaaaa 24456436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 33049710 - 33049800
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||| || | ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  33049710 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 33049800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 33007275 - 33007364
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| |  || |||||||||||||| ||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||    
T  33007275 taggttttaggaggagttaagttaggaaatcatggctagggtttg-aggaggggaattaggaaatatggttaggttttgaaggagggaaaa 33007364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 29921092 - 29921033
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||||||||||||| |||||| ||||||||| |||||||  ||||||| ||||    
T  29921092 atggttagggtttggaggaggagaattaggaaatatggttaggtttcaaaggaggaaaaa 29921033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 29921149 - 29921113
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    |||||||||||||||||||||||||||  ||||||||    
T  29921149 tggttagggtttggaggaggggaattaaaaaatatgg 29921113  T

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Target: chr8 (Bit Score: 74; Significance: 4e-34; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 22732199 - 22732296
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggcta 99  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||| ||||    
T  22732199 taggttttaggaggagtgaaattaggaaatcatggttagggtttggaggaggggaattagggaatatggttaggttttgaaggagggaaaaattgcta 22732296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 24011201 - 24011298
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggcta 99  Q
    |||||||||||||| | ||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||| ||||    
T  24011201 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggagaattatgaaatatggttagattttgaaggagggaaaaattgcta 24011298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 18490028 - 18489938
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||    
T  18490028 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattagggaatatggttaggttttgaaggagggaaaa 18489938  T

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Target: chr8; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 19958166 - 19958076
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  19958166 taggttttaggaggagtgaagttaggaaatcatggttagagtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 19958076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 24014105 - 24014195
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| ||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  24014105 taggttttaggaggagtgaagttaggaaatgatggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 24014195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 37985435 - 37985525
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||    
T  37985435 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatattgttaggttttgaaggagggaaaa 37985525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 21637159 - 21637069
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||| ||||||| | ||||||| |||||||||||||||||||||    
T  21637159 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggagaggaattagggaatatggttaggttttgaaggagggaaaa 21637069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 41377801 - 41377874
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggatagg 75  Q
    |||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  41377801 taggttttaggaggagtgaagttaggaaatcatggttagggtttggaggaggggaattaggaaatatggttagg 41377874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 18278552 - 18278610
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  18278552 tggttagggtttggaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 18278610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 18489794 - 18489864
Alignment:
Q  36 gttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaaatggctacaatttt 106  Q
    ||||||||||||||||||||||||| ||||||||| || |||||||||||||||||| || ||||||||||    
T  18489794 gttagggtttggaggaggggaattaggaaatatggttatgttttgaaggagggaaaagtgactacaatttt 18489864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 410098 - 410157
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||||||||||||| |||||| ||||||||  |||||||| ||||||||||||    
T  410098 atggttagggtttggaggaggagaattaggaaatatgcttaggttttaaaggagggaaaa 410157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 410041 - 410077
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    ||||||||||||||||||||||||||| |||||||||    
T  410041 tggttagggtttggaggaggggaattaggaaatatgg 410077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 37985586 - 37985627
Alignment:
Q  51 aggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||| ||||||| | |||||||||||||||||||||    
T  37985586 aggggaattaggaaatattgttaggttttgaaggagggaaaa 37985627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1113 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1113
Description:

Target: scaffold1113; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 2467 - 2557
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    |||||||||||||  | ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  2467 taggttttaggagaagtgaagttaggaaatcatggttagggtttagaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 2557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 44623 - 44713
Alignment:
Q  2 taggttttaggaggggggaaattaggaaatcatggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||| || | ||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||    
T  44623 taggttttagggggagtgaagttaggaaatcatggttagggtttcgaggaggggaattaggaaatatggttaggttttgaaggagggaaaa 44713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 369 - 310
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||| ||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  369 atggttaaggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaa 310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 426 - 390
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    ||||||||||||||||||||||||||| |||||||||    
T  426 tggttagggtttggaggaggggaattaggaaatatgg 390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 107 - 166
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||||||||||||||||| |||||| ||||||||  |||||||| ||||||||||||    
T  107 atggttagggtttggaggaggagaattaggaaatatgcttaggttttaaaggagggaaaa 166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 50 - 86
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    ||||||||||||||||||||||||||| |||||||||    
T  50 tggttagggtttggaggaggggaattaggaaatatgg 86  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 10280 - 10221
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||| ||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  10280 atggttaaggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaa 10221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 10337 - 10301
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    ||||||||||||||||||||||||||| |||||||||    
T  10337 tggttagggtttggaggaggggaattaggaaatatgg 10301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 28700 - 28759
Alignment:
Q  33 atggttagggtttggaggaggggaattatgaaatatggataggttttgaaggagggaaaa 92  Q
    ||||||| ||||||||||||| |||||| ||||||||| |||||||| ||||||||||||    
T  28700 atggttaaggtttggaggaggagaattaggaaatatggttaggttttaaaggagggaaaa 28759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 28643 - 28679
Alignment:
Q  34 tggttagggtttggaggaggggaattatgaaatatgg 70  Q
    ||||||||||||||||||||||||||| |||||||||    
T  28643 tggttagggtttggaggaggggaattaggaaatatgg 28679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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