View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8782_low_1 (Length: 800)

Name: NF8782_low_1
Description: NF8782
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8782_low_1
NF8782_low_1
[»] chr8 (85 HSPs)
chr8 (31-477)||(6013177-6013623)
chr8 (550-786)||(6013901-6014137)
chr8 (480-598)||(28694013-28694131)
chr8 (480-598)||(12206659-12206777)
chr8 (480-598)||(12451087-12451205)
chr8 (480-598)||(13782170-13782288)
chr8 (482-594)||(39513209-39513321)
chr8 (491-602)||(12207236-12207347)
chr8 (491-602)||(12451664-12451775)
chr8 (480-594)||(39277481-39277595)
chr8 (480-598)||(40740841-40740959)
chr8 (480-594)||(7120839-7120953)
chr8 (542-599)||(37651750-37651807)
chr8 (482-599)||(38134134-38134251)
chr8 (480-600)||(34892829-34892949)
chr8 (491-594)||(39831095-39831198)
chr8 (480-594)||(41471032-41471146)
chr8 (482-598)||(16939315-16939431)
chr8 (479-574)||(16940295-16940390)
chr8 (491-594)||(20859635-20859738)
chr8 (482-584)||(36345927-36346029)
chr8 (480-594)||(43520796-43520910)
chr8 (480-601)||(2335168-2335289)
chr8 (480-583)||(32585013-32585113)
chr8 (479-600)||(36127305-36127426)
chr8 (518-595)||(41472072-41472149)
chr8 (482-602)||(3085472-3085592)
chr8 (480-594)||(3695309-3695420)
chr8 (514-598)||(37656859-37656943)
chr8 (476-568)||(39583309-39583401)
chr8 (524-600)||(42731764-42731840)
chr8 (480-575)||(28617526-28617621)
chr8 (519-602)||(35555231-35555314)
chr8 (480-599)||(41016348-41016467)
chr8 (516-599)||(41858459-41858542)
chr8 (480-562)||(5533045-5533127)
chr8 (524-598)||(34891945-34892019)
chr8 (480-602)||(38604268-38604390)
chr8 (480-562)||(44933830-44933912)
chr8 (519-600)||(31185504-31185585)
chr8 (518-599)||(31745116-31745197)
chr8 (521-598)||(39208402-39208479)
chr8 (514-599)||(40075066-40075151)
chr8 (542-594)||(6013842-6013894)
chr8 (480-562)||(27502588-27502667)
chr8 (480-562)||(38603284-38603363)
chr8 (480-575)||(13783128-13783223)
chr8 (480-575)||(27501558-27501653)
chr8 (480-562)||(32584023-32584105)
chr8 (516-602)||(34798864-34798950)
chr8 (480-598)||(36595966-36596084)
chr8 (516-594)||(40745337-40745415)
chr8 (481-601)||(44934508-44934625)
chr8 (522-603)||(26237452-26237533)
chr8 (516-573)||(36344966-36345023)
chr8 (514-599)||(37328858-37328943)
chr8 (525-593)||(4174027-4174095)
chr8 (514-594)||(39491046-39491126)
chr8 (480-571)||(7121806-7121897)
chr8 (480-594)||(15030822-15030937)
chr8 (491-594)||(20854556-20854659)
chr8 (519-594)||(27411610-27411685)
chr8 (519-594)||(35555491-35555566)
chr8 (480-575)||(43363280-43363375)
chr8 (480-594)||(45066381-45066496)
chr8 (480-602)||(22550885-22551007)
chr8 (552-602)||(41858214-41858264)
chr8 (480-594)||(30026254-30026363)
chr8 (523-599)||(915698-915774)
chr8 (526-570)||(6269046-6269090)
chr8 (516-599)||(22960582-22960666)
chr8 (480-562)||(34503082-34503161)
chr8 (516-600)||(35645854-35645938)
chr8 (518-594)||(44841932-44842008)
chr8 (523-599)||(44885650-44885725)
chr8 (489-594)||(23508536-23508638)
chr8 (524-559)||(39582498-39582533)
chr8 (521-594)||(52636-52710)
chr8 (516-594)||(4395034-4395112)
chr8 (516-590)||(25994392-25994466)
chr8 (516-598)||(38133108-38133190)
chr8 (552-598)||(41855302-41855348)
chr8 (523-575)||(1116251-1116303)
chr8 (493-598)||(3086464-3086569)
chr8 (517-562)||(43362294-43362339)
[»] chr1 (65 HSPs)
chr1 (21-473)||(37422595-37423051)
chr1 (480-598)||(13761064-13761182)
chr1 (484-594)||(4208335-4208445)
chr1 (474-594)||(50036786-50036907)
chr1 (482-602)||(7942905-7943025)
chr1 (474-602)||(19915332-19915455)
chr1 (482-599)||(12627173-12627290)
chr1 (480-594)||(47653727-47653838)
chr1 (482-601)||(5329055-5329174)
chr1 (480-596)||(28456741-28456854)
chr1 (516-573)||(26769126-26769183)
chr1 (516-601)||(45780165-45780250)
chr1 (485-580)||(42290249-42290344)
chr1 (480-594)||(4883172-4883286)
chr1 (525-587)||(5330079-5330140)
chr1 (518-576)||(48228360-48228418)
chr1 (478-600)||(49429153-49429275)
chr1 (519-600)||(43011760-43011841)
chr1 (480-594)||(21700866-21700977)
chr1 (480-575)||(586625-586720)
chr1 (514-569)||(13149065-13149120)
chr1 (480-599)||(19914400-19914519)
chr1 (480-601)||(51461873-51461991)
chr1 (480-562)||(30194392-30194474)
chr1 (480-600)||(45780929-45781046)
chr1 (516-594)||(49502875-49502953)
chr1 (521-594)||(29356733-29356806)
chr1 (514-599)||(38119515-38119600)
chr1 (523-600)||(42290835-42290912)
chr1 (519-600)||(47652660-47652741)
chr1 (518-594)||(21140964-21141040)
chr1 (518-594)||(36184344-36184420)
chr1 (478-602)||(41453769-41453893)
chr1 (523-595)||(47661531-47661603)
chr1 (480-583)||(19161842-19161945)
chr1 (519-594)||(44470070-44470145)
chr1 (480-599)||(7943931-7944047)
chr1 (480-599)||(18609028-18609144)
chr1 (52-109)||(36272315-36272371)
chr1 (57-109)||(6767886-6767937)
chr1 (480-594)||(30195407-30195518)
chr1 (480-562)||(37992570-37992649)
chr1 (480-594)||(46909598-46909709)
chr1 (490-594)||(49395542-49395646)
chr1 (480-594)||(49660765-49660876)
chr1 (523-601)||(30910066-30910145)
chr1 (483-589)||(47505908-47506014)
chr1 (552-594)||(50269196-50269238)
chr1 (480-588)||(1167506-1167615)
chr1 (484-569)||(42572781-42572866)
chr1 (481-599)||(26607456-26607571)
chr1 (480-562)||(49874978-49875057)
chr1 (519-594)||(6562926-6563001)
chr1 (525-588)||(13535685-13535748)
chr1 (519-562)||(37991583-37991626)
chr1 (519-594)||(41459270-41459345)
chr1 (491-602)||(50343999-50344110)
chr1 (519-573)||(26606758-26606812)
chr1 (519-573)||(35255356-35255410)
chr1 (540-598)||(48455430-48455488)
chr1 (529-591)||(51461087-51461149)
chr1 (490-539)||(2425715-2425764)
chr1 (542-575)||(12628211-12628244)
chr1 (480-536)||(13636142-13636199)
chr1 (490-567)||(21268803-21268880)
[»] chr4 (79 HSPs)
chr4 (480-594)||(20208449-20208563)
chr4 (480-594)||(18884524-18884638)
chr4 (518-598)||(27872314-27872394)
chr4 (480-599)||(48807406-48807523)
chr4 (480-600)||(51037488-51037608)
chr4 (480-599)||(43176648-43176767)
chr4 (479-598)||(48806420-48806539)
chr4 (480-598)||(11565801-11565919)
chr4 (524-594)||(18411137-18411207)
chr4 (516-594)||(28322173-28322251)
chr4 (480-594)||(40833630-40833744)
chr4 (483-587)||(28084013-28084115)
chr4 (482-599)||(37855793-37855910)
chr4 (518-602)||(43175665-43175749)
chr4 (480-583)||(21022908-21023011)
chr4 (480-595)||(37856764-37856879)
chr4 (480-562)||(14200532-14200614)
chr4 (480-600)||(14201550-14201667)
chr4 (480-594)||(52469063-52469177)
chr4 (480-599)||(15999819-15999939)
chr4 (479-601)||(26792263-26792386)
chr4 (518-598)||(40061036-40061116)
chr4 (526-588)||(2449674-2449736)
chr4 (484-594)||(9013893-9014003)
chr4 (520-594)||(20209387-20209461)
chr4 (480-594)||(46254468-46254582)
chr4 (480-599)||(28157515-28157631)
chr4 (481-594)||(40061182-40061295)
chr4 (480-583)||(46253436-46253536)
chr4 (522-599)||(46439624-46439701)
chr4 (491-599)||(8111446-8111554)
chr4 (518-594)||(21343432-21343508)
chr4 (480-600)||(23220611-23220731)
chr4 (522-594)||(37295202-37295274)
chr4 (480-594)||(38368170-38368281)
chr4 (480-560)||(38369202-38369282)
chr4 (480-594)||(40962893-40963004)
chr4 (483-571)||(51429326-51429414)
chr4 (491-594)||(30703957-30704060)
chr4 (518-593)||(43210322-43210397)
chr4 (519-608)||(15995646-15995736)
chr4 (480-600)||(23221690-23221807)
chr4 (516-594)||(33812878-33812956)
chr4 (482-572)||(37296207-37296297)
chr4 (478-575)||(3403805-3403902)
chr4 (480-599)||(36480560-36480676)
chr4 (482-594)||(7485683-7485795)
chr4 (518-578)||(18411207-18411267)
chr4 (519-594)||(19069125-19069201)
chr4 (519-587)||(29306506-29306574)
chr4 (481-562)||(31242186-31242268)
chr4 (480-594)||(55587297-55587408)
chr4 (524-571)||(4783608-4783655)
chr4 (518-601)||(21015671-21015754)
chr4 (483-598)||(50023570-50023685)
chr4 (483-598)||(50030688-50030803)
chr4 (480-600)||(40832579-40832696)
chr4 (480-594)||(50446947-50447061)
chr4 (518-583)||(26932533-26932598)
chr4 (534-594)||(10753489-10753549)
chr4 (534-594)||(10967258-10967318)
chr4 (552-592)||(41933714-41933754)
chr4 (518-594)||(50196968-50197044)
chr4 (519-594)||(72564-72639)
chr4 (480-562)||(3408260-3408343)
chr4 (516-594)||(9655962-9656041)
chr4 (480-539)||(16984181-16984240)
chr4 (480-573)||(35631126-35631216)
chr4 (483-598)||(50020052-50020167)
chr4 (548-598)||(2448912-2448962)
chr4 (516-594)||(42528810-42528888)
chr4 (480-536)||(6178130-6178187)
chr4 (480-536)||(21018024-21018081)
chr4 (480-536)||(41795376-41795433)
chr4 (522-575)||(42887701-42887754)
chr4 (480-536)||(49094080-49094137)
chr4 (480-599)||(53535926-53536042)
chr4 (552-601)||(55407873-55407922)
chr4 (480-536)||(55793916-55793973)
[»] chr5 (36 HSPs)
chr5 (479-601)||(18512671-18512792)
chr5 (478-594)||(8539534-8539650)
chr5 (478-594)||(11348493-11348609)
chr5 (480-600)||(30192425-30192545)
chr5 (518-598)||(41622108-41622188)
chr5 (485-598)||(18512166-18512279)
chr5 (480-594)||(13838444-13838558)
chr5 (514-590)||(35564204-35564280)
chr5 (480-598)||(35671017-35671135)
chr5 (518-598)||(35672063-35672143)
chr5 (542-599)||(35651349-35651406)
chr5 (480-562)||(3892460-3892539)
chr5 (483-595)||(41623071-41623183)
chr5 (480-579)||(3891437-3891536)
chr5 (480-599)||(35282420-35282538)
chr5 (480-594)||(2169627-2169740)
chr5 (516-594)||(8679502-8679580)
chr5 (479-600)||(40789226-40789347)
chr5 (520-594)||(204445-204520)
chr5 (518-599)||(5710-5791)
chr5 (518-575)||(13563625-13563682)
chr5 (490-571)||(18155472-18155552)
chr5 (522-594)||(34080134-34080206)
chr5 (518-594)||(38408525-38408601)
chr5 (481-562)||(14684-14765)
chr5 (519-600)||(5196977-5197058)
chr5 (490-594)||(38971653-38971757)
chr5 (480-600)||(42912092-42912209)
chr5 (478-594)||(8574621-8574737)
chr5 (554-598)||(8698833-8698877)
chr5 (522-601)||(35281771-35281850)
chr5 (479-557)||(2170574-2170652)
chr5 (516-594)||(40788782-40788860)
chr5 (480-536)||(19037490-19037547)
chr5 (518-583)||(27659889-27659954)
chr5 (518-583)||(30711218-30711283)
[»] chr2 (66 HSPs)
chr2 (482-597)||(14002455-14002570)
chr2 (516-599)||(4286028-4286111)
chr2 (480-582)||(40156350-40156452)
chr2 (482-598)||(37322133-37322248)
chr2 (491-602)||(40220570-40220681)
chr2 (480-598)||(29407907-29408025)
chr2 (480-584)||(29406921-29407025)
chr2 (514-594)||(37294280-37294360)
chr2 (480-594)||(2271757-2271872)
chr2 (491-594)||(26544020-26544123)
chr2 (480-587)||(33222562-33222669)
chr2 (516-594)||(4286757-4286835)
chr2 (480-594)||(30803038-30803152)
chr2 (516-594)||(40221186-40221264)
chr2 (480-600)||(12252502-12252622)
chr2 (480-598)||(28139576-28139695)
chr2 (480-600)||(30801976-30802093)
chr2 (480-594)||(36510876-36510990)
chr2 (483-587)||(36652852-36652956)
chr2 (480-592)||(38779663-38779772)
chr2 (516-594)||(43313415-43313493)
chr2 (518-594)||(3085975-3086051)
chr2 (516-599)||(29948818-29948901)
chr2 (480-575)||(39489141-39489236)
chr2 (482-600)||(6232598-6232716)
chr2 (484-598)||(16544306-16544420)
chr2 (519-575)||(3803602-3803659)
chr2 (516-593)||(7779584-7779661)
chr2 (518-599)||(33416063-33416144)
chr2 (480-594)||(28420237-28420348)
chr2 (518-594)||(29074061-29074137)
chr2 (480-594)||(39489986-39490097)
chr2 (480-583)||(10424789-10424892)
chr2 (480-598)||(14456436-14456555)
chr2 (523-598)||(16544679-16544754)
chr2 (491-598)||(29401636-29401743)
chr2 (523-578)||(31567896-31567951)
chr2 (481-600)||(43619163-43619283)
chr2 (480-594)||(12252061-12252172)
chr2 (522-598)||(24541671-24541747)
chr2 (518-562)||(29947738-29947782)
chr2 (519-594)||(40539153-40539229)
chr2 (516-599)||(3086119-3086202)
chr2 (491-594)||(6637473-6637576)
chr2 (519-598)||(17911108-17911187)
chr2 (480-563)||(28138550-28138633)
chr2 (519-594)||(36509907-36509982)
chr2 (480-594)||(28477087-28477201)
chr2 (516-594)||(29905400-29905478)
chr2 (515-571)||(2983361-2983418)
chr2 (523-575)||(3795294-3795347)
chr2 (518-599)||(20937831-20937912)
chr2 (52-109)||(23462629-23462685)
chr2 (518-599)||(39033032-39033113)
chr2 (522-583)||(39951212-39951273)
chr2 (481-594)||(43976791-43976904)
chr2 (480-583)||(22003421-22003525)
chr2 (552-592)||(25515901-25515941)
chr2 (480-594)||(33001926-33002037)
chr2 (491-571)||(43258764-43258844)
chr2 (480-539)||(7189971-7190030)
chr2 (516-599)||(35935151-35935234)
chr2 (526-600)||(25514485-25514559)
chr2 (526-584)||(31568648-31568706)
chr2 (514-587)||(10334382-10334455)
chr2 (480-536)||(17424128-17424185)
[»] chr7 (69 HSPs)
chr7 (480-601)||(30846815-30846936)
chr7 (480-599)||(14102368-14102487)
chr7 (480-599)||(14412385-14412504)
chr7 (486-594)||(7974878-7974986)
chr7 (519-594)||(34139728-34139803)
chr7 (480-599)||(38555433-38555552)
chr7 (480-599)||(13644355-13644474)
chr7 (482-599)||(14101382-14101499)
chr7 (482-599)||(14411399-14411516)
chr7 (480-594)||(11885898-11886012)
chr7 (480-598)||(47751205-47751322)
chr7 (483-594)||(19804512-19804623)
chr7 (490-600)||(38555023-38555133)
chr7 (519-599)||(42795139-42795219)
chr7 (480-562)||(49140627-49140706)
chr7 (480-589)||(29097880-29097986)
chr7 (501-600)||(47521350-47521449)
chr7 (480-594)||(19072376-19072490)
chr7 (516-594)||(31324862-31324939)
chr7 (480-589)||(11886904-11887013)
chr7 (480-583)||(42582065-42582165)
chr7 (516-601)||(48589737-48589822)
chr7 (480-599)||(48901462-48901578)
chr7 (514-594)||(36781503-36781583)
chr7 (479-599)||(48590358-48590478)
chr7 (480-594)||(49141641-49141752)
chr7 (523-590)||(28115536-28115603)
chr7 (480-594)||(10524377-10524491)
chr7 (516-594)||(27658029-27658107)
chr7 (480-587)||(28563607-28563711)
chr7 (523-600)||(38489302-38489379)
chr7 (480-583)||(46907489-46907589)
chr7 (482-598)||(30845886-30846002)
chr7 (478-594)||(45258022-45258138)
chr7 (519-594)||(47669546-47669622)
chr7 (480-575)||(7027-7122)
chr7 (480-583)||(12210610-12210713)
chr7 (516-594)||(7953813-7953891)
chr7 (480-562)||(17840910-17840992)
chr7 (484-594)||(41734130-41734240)
chr7 (474-594)||(18109788-18109909)
chr7 (481-606)||(27656965-27657090)
chr7 (480-599)||(29112310-29112426)
chr7 (516-589)||(29113165-29113238)
chr7 (523-599)||(5541606-5541682)
chr7 (491-575)||(12027298-12027382)
chr7 (518-594)||(13921322-13921398)
chr7 (514-594)||(37345157-37345237)
chr7 (522-594)||(38083746-38083818)
chr7 (516-556)||(38266157-38266197)
chr7 (480-562)||(42794167-42794246)
chr7 (483-573)||(48000181-48000268)
chr7 (516-599)||(12081249-12081332)
chr7 (480-594)||(13645362-13645474)
chr7 (481-594)||(18219980-18220090)
chr7 (519-598)||(32606736-32606815)
chr7 (480-599)||(42583080-42583199)
chr7 (516-594)||(38084803-38084881)
chr7 (553-594)||(556738-556779)
chr7 (542-599)||(40141309-40141366)
chr7 (516-568)||(8522192-8522244)
chr7 (521-573)||(25195981-25196033)
chr7 (514-594)||(31322988-31323068)
chr7 (519-594)||(40140677-40140753)
chr7 (480-594)||(47750466-47750577)
chr7 (480-575)||(8067-8162)
chr7 (480-575)||(46908493-46908588)
chr7 (478-583)||(618743-618849)
chr7 (516-573)||(48900820-48900877)
[»] chr3 (76 HSPs)
chr3 (480-598)||(32592152-32592270)
chr3 (480-599)||(14043918-14044037)
chr3 (516-594)||(1294133-1294211)
chr3 (480-598)||(7941045-7941163)
chr3 (480-594)||(34645501-34645615)
chr3 (480-594)||(52514230-52514341)
chr3 (480-599)||(45076270-45076389)
chr3 (480-598)||(11270304-11270422)
chr3 (521-598)||(20485597-20485674)
chr3 (480-584)||(2062335-2062439)
chr3 (480-594)||(10492893-10493004)
chr3 (480-600)||(50998700-50998820)
chr3 (480-595)||(10658761-10658876)
chr3 (480-602)||(27739587-27739709)
chr3 (480-594)||(34543156-34543270)
chr3 (521-594)||(26494557-26494630)
chr3 (482-587)||(32743153-32743258)
chr3 (482-599)||(50330546-50330663)
chr3 (521-598)||(51755605-51755682)
chr3 (491-594)||(17561698-17561801)
chr3 (480-594)||(12897763-12897877)
chr3 (492-594)||(34648236-34648338)
chr3 (514-583)||(4330742-4330811)
chr3 (480-589)||(6143615-6143724)
chr3 (480-601)||(28817021-28817142)
chr3 (519-594)||(2743336-2743412)
chr3 (480-598)||(32744172-32744287)
chr3 (478-593)||(4002680-4002795)
chr3 (480-601)||(11269243-11269361)
chr3 (516-594)||(16851065-16851143)
chr3 (480-594)||(19842443-19842557)
chr3 (516-562)||(26245306-26245352)
chr3 (518-583)||(19988409-19988474)
chr3 (481-594)||(24703436-24703549)
chr3 (519-575)||(13743251-13743307)
chr3 (514-602)||(42760263-42760351)
chr3 (491-594)||(16861068-16861171)
chr3 (480-600)||(11095107-11095224)
chr3 (518-583)||(3493538-3493603)
chr3 (518-583)||(3497232-3497297)
chr3 (519-575)||(9429908-9429965)
chr3 (480-603)||(42148225-42148345)
chr3 (480-600)||(11249544-11249664)
chr3 (522-594)||(19750075-19750147)
chr3 (524-600)||(52515052-52515128)
chr3 (525-600)||(30294919-30294994)
chr3 (552-594)||(11380379-11380421)
chr3 (523-573)||(24700681-24700731)
chr3 (516-594)||(31977598-31977676)
chr3 (516-590)||(40872017-40872091)
chr3 (518-583)||(2645405-2645470)
chr3 (518-558)||(7942063-7942103)
chr3 (519-599)||(13747777-13747857)
chr3 (480-539)||(600564-600623)
chr3 (519-598)||(3112856-3112935)
chr3 (518-569)||(4274050-4274101)
chr3 (523-594)||(6928790-6928861)
chr3 (480-575)||(32593132-32593227)
chr3 (480-594)||(34712171-34712286)
chr3 (480-594)||(34712779-34712894)
chr3 (552-599)||(41802891-41802938)
chr3 (480-539)||(48246406-48246465)
chr3 (491-594)||(49265727-49265830)
chr3 (480-539)||(55385131-55385190)
chr3 (548-598)||(7839588-7839638)
chr3 (480-558)||(10492002-10492080)
chr3 (518-588)||(17568018-17568088)
chr3 (548-594)||(41615876-41615922)
chr3 (480-599)||(45075284-45075399)
chr3 (516-594)||(55282868-55282946)
chr3 (481-538)||(596779-596836)
chr3 (480-536)||(2647719-2647776)
chr3 (484-549)||(19750026-19750091)
chr3 (553-598)||(26493591-26493636)
chr3 (526-599)||(50604486-50604559)
chr3 (480-536)||(54389791-54389848)
[»] scaffold0176 (1 HSPs)
scaffold0176 (519-594)||(653-728)
[»] scaffold0092 (1 HSPs)
scaffold0092 (480-598)||(54500-54618)
[»] scaffold0065 (2 HSPs)
scaffold0065 (480-598)||(65252-65371)
scaffold0065 (516-600)||(65456-65540)
[»] scaffold0188 (1 HSPs)
scaffold0188 (480-594)||(27936-28050)
[»] chr6 (31 HSPs)
chr6 (519-598)||(35096606-35096685)
chr6 (480-594)||(15888820-15888933)
chr6 (480-600)||(25554638-25554758)
chr6 (480-599)||(2109451-2109570)
chr6 (480-601)||(13164280-13164398)
chr6 (388-472)||(28976154-28976239)
chr6 (516-600)||(456097-456181)
chr6 (518-594)||(14124776-14124852)
chr6 (518-602)||(24719872-24719956)
chr6 (514-594)||(32034420-32034500)
chr6 (516-594)||(14834648-14834724)
chr6 (516-594)||(3177495-3177573)
chr6 (480-598)||(35177538-35177656)
chr6 (480-599)||(117195-117311)
chr6 (514-594)||(3385056-3385136)
chr6 (518-594)||(28249823-28249899)
chr6 (480-583)||(6760892-6760995)
chr6 (519-562)||(13158406-13158449)
chr6 (519-562)||(13163262-13163305)
chr6 (480-594)||(13382567-13382682)
chr6 (525-594)||(9391201-9391271)
chr6 (517-567)||(15545696-15545746)
chr6 (524-601)||(6759980-6760057)
chr6 (52-109)||(8383798-8383855)
chr6 (553-598)||(11157645-11157690)
chr6 (479-603)||(17596870-17596995)
chr6 (537-594)||(32643444-32643501)
chr6 (524-600)||(455402-455478)
chr6 (559-594)||(3178149-3178184)
chr6 (480-536)||(6204823-6204880)
chr6 (480-536)||(22305104-22305161)
[»] scaffold0016 (1 HSPs)
scaffold0016 (480-575)||(69241-69336)
[»] scaffold0019 (1 HSPs)
scaffold0019 (518-567)||(127467-127516)
[»] scaffold0217 (1 HSPs)
scaffold0217 (542-600)||(8735-8793)
[»] scaffold0038 (1 HSPs)
scaffold0038 (518-594)||(49985-50061)
[»] scaffold0513 (1 HSPs)
scaffold0513 (521-575)||(8157-8211)
[»] scaffold0494 (1 HSPs)
scaffold0494 (518-600)||(11512-11594)
[»] scaffold0101 (1 HSPs)
scaffold0101 (480-536)||(36554-36611)
[»] scaffold0283 (1 HSPs)
scaffold0283 (523-599)||(1676-1751)
[»] scaffold0341 (1 HSPs)
scaffold0341 (519-594)||(18116-18191)
[»] scaffold0199 (1 HSPs)
scaffold0199 (484-594)||(10591-10701)
[»] scaffold0192 (1 HSPs)
scaffold0192 (514-571)||(18953-19010)


Alignment Details
Target: chr8 (Bit Score: 329; Significance: 0; HSPs: 85)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 31 - 477
Target Start/End: Original strand, 6013177 - 6013623
Alignment:
Q  31 aaaaactatatcaaattgaatactgattttaaatttgaattttgcagtttgacatgaaattggtctctcaatccctttcacgagtacccttannnnnnnc 130  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |    
T  6013177 aaaaactatatcaaattaaatactgattttcaatttgaattttgcagtttgacatgaaattggtctctcaatccctttcacgagtacccttatttttttc 6013276  T
Q  131 acggatctagtatattgattcatggcctttcttgtaagaacccaaaaacacatacaaataaaaatcaatgagtctgagaatnnnnnnngctagattgtta 230  Q
    || |||||||||||||||||||||| | ||||| ||||||||||||||||| |||||||||||||  ||||||||||||||       ||||||||||||    
T  6013277 acagatctagtatattgattcatggtcattcttttaagaacccaaaaacacctacaaataaaaattgatgagtctgagaataaaaaaagctagattgtta 6013376  T
Q  231 aaatattgttgagttgaaatgttaaagctacaagcataaggaatttttgatacccatatgaatagaatctcataggattcaagacccattgcaatttgaa 330  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  6013377 aaatattgttgagttgaaatgttaaagctacaagtataaggaattttttatacccatatgaatagaacctcataggatttaagacccattgcaatttgaa 6013476  T
Q  331 gcaacttaaaactgtagtgtcaccgaaacaaaaataaacagtgaatttggcttcctttggtgggtgagagatgagagagaatggttagggaagataggat 430  Q
    || ||||||||||||||||| | ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6013477 gccacttaaaactgtagtgttatcgaaacaaaaataaacattgaatttgtcttcctttggtgggtgagagatgagagagaatggttagggaagataggat 6013576  T
Q  431 aaaaaattcagtgtagagagtgcatgataagattatgttcttctttt 477  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  6013577 aaaaaattcagtgtagagagtgcatgataagaatatgttcttctttt 6013623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 550 - 786
Target Start/End: Original strand, 6013901 - 6014137
Alignment:
Q  550 aatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaaaagggattgtgaaaagatacgtgcatacatacatactcggagcacgaga 649  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  6013901 aatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaaaagggattgtgaaaagatacgtgcatacatacatactcggagcacggga 6014000  T
Q  650 gtttgaatgtgtccttttcctttaccttatttttgttgtactaatagagcaagaagaagggactaaaatgtacgtgatggttacacattctcctacaccg 749  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6014001 gtttgaatgtgtccttttcctttaccttatttttgttgtactaattgagcaagaagaagggactaaaatgtacgtgatggttacacattctcctagaccg 6014100  T
Q  750 tgtctaaaacgggtcaaaatcttcttcattgatgtcc 786  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  6014101 tgtctaaaatgggtcaaaatcttcttcatttatgtcc 6014137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 480 - 598
Target Start/End: Complemental strand, 28694131 - 28694013
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  28694131 ttttcctcggcagttaactgcagccggttttactaaacttcggcagttaactgccgagggacatttgagtaatttactcgtgtttctcaaccaaactaaa 28694032  T
Q  580 tgtgtcaacaacaatactc 598  Q
    |||||||||| ||||||||    
T  28694031 tgtgtcaacagcaatactc 28694013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 480 - 598
Target Start/End: Complemental strand, 12206777 - 12206659
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||||| ||||| |||| |||||||||| ||| ||||||||||||||||| | ||| |||||||||||||| |||||||||||| | ||| ||||    
T  12206777 ttttcctcgacggttaactgcacccggttttactaaacttcggcagttaactgccaatggacatttgagtaatttaatcgtgtttctcaactaaattaaa 12206678  T
Q  580 tgtgtcaacaacaatactc 598  Q
    |||||||||||||||||||    
T  12206677 tgtgtcaacaacaatactc 12206659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 480 - 598
Target Start/End: Complemental strand, 12451205 - 12451087
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||||| ||||| |||| |||||||||| ||| ||||||||||||||||| | ||| |||||||||||||| |||||||||||| | ||| ||||    
T  12451205 ttttcctcgacggttaactgcacccggttttactaaacttcggcagttaactgccaatggacatttgagtaatttaatcgtgtttctcaactaaattaaa 12451106  T
Q  580 tgtgtcaacaacaatactc 598  Q
    |||||||||||||||||||    
T  12451105 tgtgtcaacaacaatactc 12451087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 480 - 598
Target Start/End: Complemental strand, 13782288 - 13782170
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||||||||| ||||| |   ||| || |||||||||||||||||||| |||| ||||||||||||||||||||||||||||  |||    
T  13782288 ttttcctcggcagttaattgcagtcggttctttaaaattttggcagttaactgccgagggacatttaagtaatttactcgtgtttctcagccaaatcaaa 13782189  T
Q  580 tgtgtcaacaacaatactc 598  Q
    |||||||||||||||||||    
T  13782188 tgtgtcaacaacaatactc 13782170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 482 - 594
Target Start/End: Original strand, 39513209 - 39513321
Alignment:
Q  482 ttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatg 581  Q
    ||||||||||||||||||||||||||| |   ||| ||||  ||||||||||||||||  |||||||||||||||||||||||||||| ||||| |||||    
T  39513209 ttcctcgacagttaattgcagccggttctttaaaatttcgatagttaactgccgaggggcatttgagtaatttactcgtgtttctcagtcaaaccaaatg 39513308  T
Q  582 tgtcaacaacaat 594  Q
    |||||||||||||    
T  39513309 tgtcaacaacaat 39513321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 491 - 602
Target Start/End: Original strand, 12207236 - 12207347
Alignment:
Q  491 agttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaa 590  Q
    |||||| |||||||  |||||| ||| ||||||||||||||||||| ||  |||||||||||||| |||||||||||||||||| ||||||||||||||     
T  12207236 agttaactgcagccaattttactaaacttcggcagttaactgccgatgggcatttgagtaatttattcgtgtttctcagccaaattaaatgtgtcaacat 12207335  T
Q  591 caatactcaaaa 602  Q
    ||||||||||||    
T  12207336 caatactcaaaa 12207347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 491 - 602
Target Start/End: Original strand, 12451664 - 12451775
Alignment:
Q  491 agttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaa 590  Q
    |||||| |||||||  |||||| ||| ||||||||||||||||||| ||  |||||||||||||| |||||||||||||||||| ||||||||||||||     
T  12451664 agttaactgcagccaattttactaaacttcggcagttaactgccgatgggcatttgagtaatttattcgtgtttctcagccaaattaaatgtgtcaacat 12451763  T
Q  591 caatactcaaaa 602  Q
    ||||||||||||    
T  12451764 caatactcaaaa 12451775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 39277481 - 39277595
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||  | |||| |||||||| || ||| ||| ||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||| |||    
T  39277481 ttttcctcggtaattaactgcagccgattctactaaacttcggcagttaactgccgaggggcatttgaataatttactcgtgtttctcagccaaaccaaa 39277580  T
Q  580 tgtgtcaacaacaat 594  Q
    |||||||||||||||    
T  39277581 tgtgtcaacaacaat 39277595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 480 - 598
Target Start/End: Complemental strand, 40740959 - 40740841
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||||| |   ||| ||||||||||||||| ||| ||||||||| |||| ||||||||||||||||||||||| |||    
T  40740959 ttttcctcggcagttaactgcagccggttctttaaaatttcggcagttaactgtcgaaggatatttgggtaaattactcgtgtttctcagccaaaccaaa 40740860  T
Q  580 tgtgtcaacaacaatactc 598  Q
    ||||| |||| ||||||||    
T  40740859 tgtgtgaacagcaatactc 40740841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 7120953 - 7120839
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||| |||| ||| ||| ||||||||||||    ||||||| ||||||||||||||| ||||||||   ||| |||||||||||||||||||||||||||    
T  7120953 tttttctcggcagctaactgcagccggtttctttaaaattcagcagttaactgccgaaggatatttagataaattactcgtgtttctcagccaaactaaa 7120854  T
Q  580 tgtgtcaacaacaat 594  Q
    |||||||| ||||||    
T  7120853 tgtgtcaataacaat 7120839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 542 - 599
Target Start/End: Complemental strand, 37651807 - 37651750
Alignment:
Q  542 atttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37651807 atttgagtaatttactcgtgtttctcagccaaaccaaatgtgtcaacaacaatactca 37651750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 482 - 599
Target Start/End: Original strand, 38134134 - 38134251
Alignment:
Q  482 ttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatg 581  Q
    ||||||| ||||||| ||||||||||| |   ||| || | |||||||||||||| ||  |||||||||||||||| |||| |||||||||||| |||||    
T  38134134 ttcctcggcagttaactgcagccggttctttaaaattttgacagttaactgccgatgggcatttgagtaatttacttgtgtctctcagccaaaccaaatg 38134233  T
Q  582 tgtcaacaacaatactca 599  Q
    ||| ||||||||||||||    
T  38134234 tgtaaacaacaatactca 38134251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 480 - 600
Target Start/End: Original strand, 34892829 - 34892949
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||| ||||| |   ||| ||||  ||| ||||||||| |||||||||||||| |||||| |||||||||||||||  |||    
T  34892829 ttttcctcggcagttaactgcagtcggttctttaaaatttcgaaagtcaactgccgaaggatatttgagtaaattactcatgtttctcagccaaatcaaa 34892928  T
Q  580 tgtgtcaacaacaatactcaa 600  Q
    ||||| |||||||||||||||    
T  34892929 tgtgtgaacaacaatactcaa 34892949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 491 - 594
Target Start/End: Complemental strand, 39831198 - 39831095
Alignment:
Q  491 agttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaa 590  Q
    |||||| |||||||||||||   ||| |||||||||||||| |||||||  ||||  |||| |||||||||| |||||||||||| ||||||||||||||    
T  39831198 agttaactgcagccggttttctaaaatttcggcagttaactaccgaggggcatttaggtaaattactcgtgtgtctcagccaaaccaaatgtgtcaacaa 39831099  T
Q  591 caat 594  Q
    ||||    
T  39831098 caat 39831095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 41471146 - 41471032
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||| |||||| |||||||| || |   ||| |||| |||||||||| ||| ||| |||||||||||||||||||||| ||| ||||||  |||    
T  41471146 ttttcctcgaaagttaactgcagccgattctttaaaatttcgacagttaactgtcgaaggacatttgagtaatttactcgtgttactcggccaaatcaaa 41471047  T
Q  580 tgtgtcaacaacaat 594  Q
    |||||||||||||||    
T  41471046 tgtgtcaacaacaat 41471032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 482 - 598
Target Start/End: Complemental strand, 16939431 - 16939315
Alignment:
Q  482 ttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatg 581  Q
    ||||||| ||||||| ||||||||||| |   ||| ||| |||||||||||||||  | |||||| |||| |||||||||||||||||| |||| |||||    
T  16939431 ttcctcggcagttaactgcagccggttctttaaaatttcagcagttaactgccgaaaggtatttgggtaaattactcgtgtttctcagcaaaaccaaatg 16939332  T
Q  582 tgtcaacaacaatactc 598  Q
    ||| |||| ||||||||    
T  16939331 tgtgaacagcaatactc 16939315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 479 - 574
Target Start/End: Original strand, 16940295 - 16940390
Alignment:
Q  479 attttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaa 574  Q
    |||||||||||||||||| |||| |||||| |   ||| ||||||| ||||||||| || || |||| ||||||||||||||||||||||||||||    
T  16940295 attttcctcgacagttaactgcaaccggttctttaaaatttcggcacttaactgccaagagacatttaagtaatttactcgtgtttctcagccaaa 16940390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 491 - 594
Target Start/End: Original strand, 20859635 - 20859738
Alignment:
Q  491 agttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaa 590  Q
    |||||| ||||||||||||    ||| ||||||||||||||| ||||||| ||||  |||| || ||||||| |||||||||||| ||||||||||||||    
T  20859635 agttaaatgcagccggtttccacaaacttcggcagttaactgtcgagggacatttaggtaaattcctcgtgtgtctcagccaaaccaaatgtgtcaacaa 20859734  T
Q  591 caat 594  Q
    ||||    
T  20859735 caat 20859738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 482 - 584
Target Start/End: Original strand, 36345927 - 36346029
Alignment:
Q  482 ttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatg 581  Q
    ||||||| ||||||| ||||||||||  |   ||| ||||||||||||||| ||| | | ||||||||||||||||||||||| |||||||||| |||||    
T  36345927 ttcctcggcagttaactgcagccggtgcttttaaatttcggcagttaactgtcgaagaacatttgagtaatttactcgtgtttatcagccaaaccaaatg 36346026  T
Q  582 tgt 584  Q
    |||    
T  36346027 tgt 36346029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 43520796 - 43520910
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||  ||||||| |||||||| || |   ||| ||||||||||||||||||| | | |||||| ||||||||||||||||||||  ||||| |||    
T  43520796 ttttcctcagcagttaactgcagccgattctttaaaatttcggcagttaactgccgatgaacatttgaataatttactcgtgtttctcactcaaaccaaa 43520895  T
Q  580 tgtgtcaacaacaat 594  Q
    ||||| |||||||||    
T  43520896 tgtgtgaacaacaat 43520910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 480 - 601
Target Start/End: Original strand, 2335168 - 2335289
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||  |||   ||| ||||| ||||||||||||||||  |||||||||||||||||||||  | ||||||||| | |    
T  2335168 ttttcctcggcagttaactgcagccgtatttctaaaacttcggtagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaacaaca 2335267  T
Q  580 tgtgtcaacaacaatactcaaa 601  Q
    ||||  ||||||||| ||||||    
T  2335268 tgtgggaacaacaattctcaaa 2335289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 480 - 583
Target Start/End: Original strand, 32585013 - 32585113
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||||||||||| |    |||||||||||||||| |||||||| |||||||||||||||||||||  |  |||||||| |||    
T  32585013 ttttcctcggcagttaactgcagccggtttcat---aattcggcagttaactaccgagggacatttgagtaatttactcgtgtggcatagccaaaccaaa 32585109  T
Q  580 tgtg 583  Q
    ||||    
T  32585110 tgtg 32585113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 479 - 600
Target Start/End: Complemental strand, 36127426 - 36127305
Alignment:
Q  479 attttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaa 578  Q
    |||||||||  ||||||| | |||||||||||   ||| |||| ||||||||||||||| ||  |||  |||| |||||||||| |||||||||||| ||    
T  36127426 attttcctcagcagttaacttcagccggttttctaaaacttcgtcagttaactgccgagagacgtttaggtaaattactcgtgtgtctcagccaaaccaa 36127327  T
Q  579 atgtgtcaacaacaatactcaa 600  Q
    ||||| ||||| ||||||||||    
T  36127326 atgtgccaacatcaatactcaa 36127305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 518 - 595
Target Start/End: Original strand, 41472072 - 41472149
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaata 595  Q
    ||||||||||||||| ||| || |||||| |||| ||||||||||||||||||||||  |||||||| ||||||||||    
T  41472072 ttcggcagttaactgtcgaagggtatttgggtaaattactcgtgtttctcagccaaatcaaatgtgtgaacaacaata 41472149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 482 - 602
Target Start/End: Complemental strand, 3085592 - 3085472
Alignment:
Q  482 ttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatg 581  Q
    ||||||| ||||||| ||||||||||| |   ||| ||||| |||||||| |||||| | ||||||||||||||||||||  | |||||||||   ||||    
T  3085592 ttcctcggcagttaactgcagccggttctttaaaatttcggtagttaactaccgaggaacatttgagtaatttactcgtgactttcagccaaagggaatg 3085493  T
Q  582 tgtcaacaacaatactcaaaa 602  Q
    |||||||  ||||||||||||    
T  3085492 tgtcaaccgcaatactcaaaa 3085472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 3695420 - 3695309
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||  |||||| |||||||||||   | | ||||||||||||||||||||||||  |||||  ||| |||||||||||||||||||||   | |    
T  3695420 ttttcctcggtagttaactgcagccggtt---ccataattcggcagttaactgccgaggggcatttggataaattactcgtgtttctcagccaatgcata 3695324  T
Q  580 tgtgtcaacaacaat 594  Q
    |||||||||||||||    
T  3695323 tgtgtcaacaacaat 3695309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 514 - 598
Target Start/End: Original strand, 37656859 - 37656943
Alignment:
Q  514 aaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactc 598  Q
    |||||||||||||||||||| || |||||||||||||| |||||| ||||| | |||||||| |||||||| ||| | |||||||    
T  37656859 aaaattcggcagttaactgctgaaggatatttgagtaaattactcatgtttttaagccaaaccaaatgtgtgaaccataatactc 37656943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 476 - 568
Target Start/End: Original strand, 39583309 - 39583401
Alignment:
Q  476 ttcattttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctca 568  Q
    ||||| ||||||| ||||||| |||||||| ||||   | ||||||||||||||||| ||| |||||||||| |||||||||||| |||||||    
T  39583309 ttcatgttcctcggcagttaactgcagccgatttttttagaattcggcagttaactgtcgatggatatttgaataatttactcgtatttctca 39583401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 524 - 600
Target Start/End: Complemental strand, 42731840 - 42731764
Alignment:
Q  524 agttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaa 600  Q
    |||||||||||||  ||||||||| ||| ||||| ||||||||||||||||| |||||||| ||||||||| |||||    
T  42731840 agttaactgccgaaagatatttgaataaattacttgtgtttctcagccaaaccaaatgtgtaaacaacaattctcaa 42731764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 480 - 575
Target Start/End: Complemental strand, 28617621 - 28617526
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaac 575  Q
    ||||||||| ||||||| ||||||||  |||   ||| ||||||||||||||||||| || ||||||||||||||||||||||  | |||||||||    
T  28617621 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagccaaac 28617526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 519 - 602
Target Start/End: Original strand, 35555231 - 35555314
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaaaa 602  Q
    ||||||||||||| ||||||| |||||  ||| |||||| ||||||||||||| ||| | |||||||||||||||| |||||||    
T  35555231 tcggcagttaactaccgaggggtattttggtattttacttgtgtttctcagcctaacaagatgtgtcaacaacaattctcaaaa 35555314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 41016467 - 41016348
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||||  || |||   ||| ||||| ||||||||| ||||||  |||||| | |||||||||||||||| ||||||||| ||    
T  41016467 ttttcctcggcagttaactgcagttggatttctaaaacttcggtagttaactgtcgaggggcatttgaatgatttactcgtgtttcttagccaaactcaa 41016368  T
Q  580 tgtgtcaacaacaatactca 599  Q
    |||||||||| |||| ||||    
T  41016367 tgtgtcaacagcaattctca 41016348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 516 - 599
Target Start/End: Complemental strand, 41858542 - 41858459
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    ||||||||||||||||| ||||||  |||||  ||| |||||||||||||||||||||  || |||||||||||||||| ||||    
T  41858542 aattcggcagttaactgtcgaggggcatttggataaattactcgtgtttctcagccaatgtatatgtgtcaacaacaattctca 41858459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 480 - 562
Target Start/End: Original strand, 5533045 - 5533127
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgt 562  Q
    ||||||||| ||||||| ||||||||  |||   ||| |||||||||||||||| ||||| ||||||||||||||||||||||    
T  5533045 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgctgaggggtatttgagtaatttactcgtgt 5533127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 524 - 598
Target Start/End: Complemental strand, 34892019 - 34891945
Alignment:
Q  524 agttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactc 598  Q
    |||||||||||||||   |||||| ||||||| |||||||||||||| |||| ||||||||||||| ||||||||    
T  34892019 agttaactgccgaggagcatttgaataatttattcgtgtttctcagctaaaccaaatgtgtcaacagcaatactc 34891945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 480 - 602
Target Start/End: Original strand, 38604268 - 38604390
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||  |||   ||| ||||||||||||||| |||||| ||||||||||||||||| | ||  | ||||||||| |||    
T  38604268 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgtcgaggggtatttgagtaatttacttgggtggcacagccaaaccaaa 38604367  T
Q  580 tgtgtcaacaacaatactcaaaa 602  Q
     |||  ||||||||| |||||||    
T  38604368 agtgggaacaacaattctcaaaa 38604390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 480 - 562
Target Start/End: Complemental strand, 44933912 - 44933830
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgt 562  Q
    ||||||||| ||||||| ||||||||  |||   ||| ||||||||||||||||||||||  |||||||||||||||||||||    
T  44933912 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggcatttgagtaatttactcgtgt 44933830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 519 - 600
Target Start/End: Original strand, 31185504 - 31185585
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaa 600  Q
    |||||| |||||||||||||| ||||||||||||||||||||||  | ||||||||| ||| |||  ||||||||| |||||    
T  31185504 tcggcaattaactgccgaggggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctcaa 31185585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 518 - 599
Target Start/End: Complemental strand, 31745197 - 31745116
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    |||||||||||||| |||| || |||||| |||| ||||||||||||||||||||||| ||||| || |||| |||| ||||    
T  31745197 ttcggcagttaactaccgaagggtatttgggtaaattactcgtgtttctcagccaaaccaaatgcgtaaacagcaattctca 31745116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 521 - 598
Target Start/End: Original strand, 39208402 - 39208479
Alignment:
Q  521 ggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactc 598  Q
    |||||||||||  ||| ||| ||||||||||||||||||||||| ||||| | || |||||| |||||||||||||||    
T  39208402 ggcagttaactatcgaaggacatttgagtaatttactcgtgtttttcagcaataccaaatgtatcaacaacaatactc 39208479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 514 - 599
Target Start/End: Complemental strand, 40075151 - 40075066
Alignment:
Q  514 aaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    ||||||||||| ||||||| ||| ||  |||| ||||| |||||||||| |||||||| ||| |||||||||||||||||| ||||    
T  40075151 aaaattcggcacttaactgtcgaagggcatttaagtaaattactcgtgtgtctcagcctaaccaaatgtgtcaacaacaattctca 40075066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 542 - 594
Target Start/End: Complemental strand, 6013894 - 6013842
Alignment:
Q  542 atttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||| ||||    
T  6013894 atttgagtaatttactcgtgattctcagccaaaccaaatgtgtcaacatcaat 6013842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 480 - 562
Target Start/End: Original strand, 27502588 - 27502667
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgt 562  Q
    ||||||||| ||||||| |||||||||||| |    |||||| |||||||||||||||||  |||||||||||||||||||||    
T  27502588 ttttcctcggcagttaactgcagccggtttcat---aattcgacagttaactgccgaggggcatttgagtaatttactcgtgt 27502667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 480 - 562
Target Start/End: Complemental strand, 38603363 - 38603284
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgt 562  Q
    ||||||||||||||||| ||||| |||||| |    ||||||||||||||||||||||| | |||| ||||||||||||||||    
T  38603363 ttttcctcgacagttaactgcagtcggtttcat---aattcggcagttaactgccgaggaacatttaagtaatttactcgtgt 38603284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 480 - 575
Target Start/End: Original strand, 13783128 - 13783223
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaac 575  Q
    ||||||||| ||||||| ||||||||||| |   ||| |||| ||||||||||||||  | ||||||||||| |||  ||||||||||||||||||    
T  13783128 ttttcctcggcagttaactgcagccggttctttaaaatttcgacagttaactgccgaatggtatttgagtaaattaaccgtgtttctcagccaaac 13783223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 480 - 575
Target Start/End: Complemental strand, 27501653 - 27501558
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaac 575  Q
    ||||||||| ||||||| ||||||||  |||   ||| ||||| |||||||||||||| | ||||||||||||||||||||||  | |||||||||    
T  27501653 ttttcctcggcagttaactgcagccgtatttctaaaacttcggtagttaactgccgagaggtatttgagtaatttactcgtgtggcacagccaaac 27501558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 480 - 562
Target Start/End: Complemental strand, 32584105 - 32584023
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgt 562  Q
    ||||||||| ||||||| ||||||||  |||   ||| |||| ||||||||| ||||||| ||||||||||||||||||||||    
T  32584105 ttttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactaccgaggggtatttgagtaatttactcgtgt 32584023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 602
Target Start/End: Original strand, 34798864 - 34798950
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaaaa 602  Q
    ||||||||||||||||||||||||  ||||| |||| ||||| |||||||||||||||   | ||||||||| | |||| |||||||    
T  34798864 aattcggcagttaactgccgaggggcatttgggtaaattacttgtgtttctcagccaatgcatatgtgtcaagagcaattctcaaaa 34798950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 480 - 598
Target Start/End: Original strand, 36595966 - 36596084
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||||| |   ||| |||| || |||||||||||   | |||| |||||||||| ||| ||||||||||||||| ||    
T  36595966 ttttcctcggcagttaactgcagccggttctttaaaatttcgacaattaactgccgaaaaacatttaagtaatttacacgtatttctcagccaaactgaa 36596065  T
Q  580 tgtgtcaacaacaatactc 598  Q
      |||||||||| ||||||    
T  36596066 catgtcaacaactatactc 36596084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 594
Target Start/End: Original strand, 40745337 - 40745415
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||||||||||||||| |||||  ||| ||||||||||||||  |||||   | ||||||||||||||||    
T  40745337 aattcggcagttaactgccgagggacatttggataaattactcgtgtttcttggccaatgcatatgtgtcaacaacaat 40745415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 481 - 601
Target Start/End: Original strand, 44934508 - 44934625
Alignment:
Q  481 tttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaat 580  Q
    |||||||| ||| ||| |||||||||||| |    ||||||| ||||||||| |||||| |||||| |||| ||||| ||||||||||||||||   |||    
T  44934508 tttcctcggcagataactgcagccggtttcat---aattcggtagttaactgtcgaggggtatttgggtaaattactagtgtttctcagccaaagataat 44934604  T
Q  581 gtgtcaacaacaatactcaaa 601  Q
    |||| |||| |||| ||||||    
T  44934605 gtgttaacagcaattctcaaa 44934625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 522 - 603
Target Start/End: Complemental strand, 26237533 - 26237452
Alignment:
Q  522 gcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaaaag 603  Q
    ||||||||||| ||| ||| |||| |||| |||||  |||||| |||||||||| | ||| |||||||||||||||||||||    
T  26237533 gcagttaactgtcgaaggacattttagtattttacatgtgtttttcagccaaacaacatgcgtcaacaacaatactcaaaag 26237452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 516 - 573
Target Start/End: Complemental strand, 36345023 - 36344966
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaa 573  Q
    ||||||||||||||||||||||||  ||||| |||| ||||| |||||||||||||||    
T  36345023 aattcggcagttaactgccgaggggcatttgggtaaattactagtgtttctcagccaa 36344966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 514 - 599
Target Start/End: Original strand, 37328858 - 37328943
Alignment:
Q  514 aaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    ||||||||||||||||||||||| | | |||| | ||  ||||| |||| |||||||||||| |||||||||||||| ||| ||||    
T  37328858 aaaattcggcagttaactgccgaagaacatttaaatatcttacttgtgtgtctcagccaaaccaaatgtgtcaacaataattctca 37328943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 525 - 593
Target Start/End: Complemental strand, 4174095 - 4174027
Alignment:
Q  525 gttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaa 593  Q
    ||||||| ||||  ||||||| |||| ||||| |||||||||||||||||| | |||||||||||||||    
T  4174095 gttaactaccgaaagatattttagtattttacccgtgtttctcagccaaaccacatgtgtcaacaacaa 4174027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 594
Target Start/End: Complemental strand, 39491126 - 39491046
Alignment:
Q  514 aaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||| ||||||||||||||  || ||||  |||| |||||||||| |||||||  ||| ||||||||||||||||||    
T  39491126 aaaattcgacagttaactgccgaaagacatttatgtaaattactcgtgtgtctcagcttaaccaaatgtgtcaacaacaat 39491046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 480 - 571
Target Start/End: Original strand, 7121806 - 7121897
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagcc 571  Q
    ||||||||  ||||||| ||||||||||| |   ||| |||| ||||||||||||||| |  |||||||||||||||| |||||| ||||||    
T  7121806 ttttcctcagcagttaactgcagccggttctttaaaatttcgacagttaactgccgagaggcatttgagtaatttacttgtgtttttcagcc 7121897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 15030937 - 15030822
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaa-ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaa 578  Q
    ||||||||| ||||||| ||| ||||||||    |||| |||||||||| ||| |||| ||  |||||||||||||||||||||  | ||||||||| ||    
T  15030937 ttttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagccaaaccaa 15030838  T
Q  579 atgtgtcaacaacaat 594  Q
    |||||  |||||||||    
T  15030837 atgtgggaacaacaat 15030822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 491 - 594
Target Start/End: Complemental strand, 20854659 - 20854556
Alignment:
Q  491 agttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaa 590  Q
    |||||| ||| |||||||||   ||| ||||||||||||||||||||||| || |   ||| |||||||||||||||||||  |  |||||||| |||||    
T  20854659 agttaactgccgccggttttctaaaacttcggcagttaactgccgagggacatgtagataaattactcgtgtttctcagccttatcaaatgtgtgaacaa 20854560  T
Q  591 caat 594  Q
    ||||    
T  20854559 caat 20854556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 519 - 594
Target Start/End: Complemental strand, 27411685 - 27411610
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||| ||||||||| |||||| |||||  ||  |||||  ||||||||||||||||| ||||||||||||||||||    
T  27411685 tcggtagttaactgtcgaggggtattttcgtcttttacatgtgtttctcagccaaaccaaatgtgtcaacaacaat 27411610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 519 - 594
Target Start/End: Original strand, 35555491 - 35555566
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||| ||||||| |||||  ||| |||||||||||||||||| | ||| | |||||| |||||||||    
T  35555491 tcggcagttaactaccgaggggtattttggtattttactcgtgtttctcagtctaacaagatgtgttaacaacaat 35555566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 480 - 575
Target Start/End: Original strand, 43363280 - 43363375
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaac 575  Q
    |||||||||  |||||| ||||||||  |||   ||| |||||||||||| ||||||| | ||||||||||||||||||||||  | |||||||||    
T  43363280 ttttcctcggtagttaactgcagccgtatttctaaaacttcggcagttaagtgccgagaggtatttgagtaatttactcgtgtggcacagccaaac 43363375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 45066381 - 45066496
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaa-ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaa 578  Q
    ||||||||| ||||||| ||| ||||||||    |||| |||||||||| ||| |||| ||  |||||||||||||||||||||  | ||||||||| ||    
T  45066381 ttttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagccaaaccaa 45066480  T
Q  579 atgtgtcaacaacaat 594  Q
    |||||  |||||||||    
T  45066481 atgtgggaacaacaat 45066496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 480 - 602
Target Start/End: Original strand, 22550885 - 22551007
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||| |||   ||| ||||||||||||||||||| ||  ||||  |||| ||||||||||  | |||||  |  |||    
T  22550885 ttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaagggcatttaggtaaattactcgtgtggcacagccttatcaaa 22550984  T
Q  580 tgtgtcaacaacaatactcaaaa 602  Q
    ||||| ||||||||| |||||||    
T  22550985 tgtgtaaacaacaattctcaaaa 22551007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 602
Target Start/End: Original strand, 41858214 - 41858264
Alignment:
Q  552 tttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaaaa 602  Q
    ||||||||||||||||||||| |  |||||||||||||||||| |||||||    
T  41858214 tttactcgtgtttctcagccatatgaaatgtgtcaacaacaattctcaaaa 41858264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 30026254 - 30026363
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||  |||||| |||||||||||   | | ||||||||||||||||||||||||  |||||  ||| ||| |  ||||||||||||||  || |    
T  30026254 ttttcctcggtagttaactgcagccggtt---ccataattcggcagttaactgccgaggggcatttggataaattatt--tgtttctcagccaatgtata 30026348  T
Q  580 tgtgtcaacaacaat 594  Q
    |||||||||||||||    
T  30026349 tgtgtcaacaacaat 30026363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 523 - 599
Target Start/End: Original strand, 915698 - 915774
Alignment:
Q  523 cagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    |||||||||| ||| || ||||||||||||||||||||||  | ||||||||| ||| |||  ||||||||| ||||    
T  915698 cagttaactgtcgaagggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctca 915774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 526 - 570
Target Start/End: Original strand, 6269046 - 6269090
Alignment:
Q  526 ttaactgccgagggatatttgagtaatttactcgtgtttctcagc 570  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||    
T  6269046 ttaactgccgaggaatatttgaataaattactcgtgtttctcagc 6269090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 516 - 599
Target Start/End: Complemental strand, 22960666 - 22960582
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgag-taatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    |||||||||||||||||||||| |  ||||| | ||| |||||||||||||||| ||||   | |||||||||||||||| ||||    
T  22960666 aattcggcagttaactgccgagtggcatttggggtaaattactcgtgtttctcatccaatacatatgtgtcaacaacaattctca 22960582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 480 - 562
Target Start/End: Original strand, 34503082 - 34503161
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgt 562  Q
    |||||||||  |||||| |||||||||||   | | |||||||||||||||||||||||| |||||  |||| ||||||||||    
T  34503082 ttttcctcggtagttaactgcagccggtt---ccataattcggcagttaactgccgaggggtatttcggtaaattactcgtgt 34503161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 516 - 600
Target Start/End: Complemental strand, 35645938 - 35645854
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaa 600  Q
    ||||||||||||||||||||| ||| |||||  ||| ||| | |||||||||| ||||    ||||||| |||||||||||||||    
T  35645938 aattcggcagttaactgccgaaggacatttggataaattagtagtgtttctcaaccaatgacaatgtgtaaacaacaatactcaa 35645854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 594
Target Start/End: Original strand, 44841932 - 44842008
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||||||||| ||||| ||||||| ||||||||| ||||  | ||||||||| ||| |||  |||||||||    
T  44841932 ttcggcagttaactgctgaggggtatttgactaatttacttgtgtggcacagccaaaccaaaagtgggaacaacaat 44842008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 523 - 599
Target Start/End: Complemental strand, 44885725 - 44885650
Alignment:
Q  523 cagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    ||||||||||||||  ||||||| | ||| |||||||||||||| |||||||| |||||||| |||| |||| ||||    
T  44885725 cagttaactgccgaaagatatttaaataaattactcgtgtttct-agccaaaccaaatgtgtaaacatcaattctca 44885650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 594
Target Start/End: Complemental strand, 23508638 - 23508536
Alignment:
Q  489 acagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaac 588  Q
    |||||||| |||||||||||   | | |||||||||||||||||||||||| |||||   || |||||  || || ||||||||||| |||| | |||||    
T  23508638 acagttaactgcagccggtt---ccataattcggcagttaactgccgaggggtattttcatattttacatgtattcctcagccaaaccaaatatatcaac 23508542  T
Q  589 aacaat 594  Q
    ||||||    
T  23508541 aacaat 23508536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 524 - 559
Target Start/End: Complemental strand, 39582533 - 39582498
Alignment:
Q  524 agttaactgccgagggatatttgagtaatttactcg 559  Q
    |||||||||||||||||||||||| |||||||||||    
T  39582533 agttaactgccgagggatatttgaataatttactcg 39582498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 521 - 594
Target Start/End: Original strand, 52636 - 52710
Alignment:
Q  521 ggcagttaactgccgagg-gatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||| |||||| |||||||  ||| |||||||||| || |||||| ||| | ||||||||||||||||    
T  52636 ggcagttaactaccgaggagatattttggtattttactcgtgattttcagcctaacaagatgtgtcaacaacaat 52710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 516 - 594
Target Start/End: Original strand, 4395034 - 4395112
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||  ||||||||||||| || ||||  ||  |||||  ||||||||||||||||| ||||| ||||||||||||    
T  4395034 aattcggttgttaactgccgagagacatttttgtcttttacatgtgtttctcagccaaaccaaatgcgtcaacaacaat 4395112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 516 - 590
Target Start/End: Complemental strand, 25994466 - 25994392
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaa 590  Q
    ||||||||||||||||| ||||||  ||||| |||| |||  ||||||||||||||||   | ||||||||||||    
T  25994466 aattcggcagttaactgtcgaggggcatttgggtaaattatccgtgtttctcagccaatgcatatgtgtcaacaa 25994392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 516 - 598
Target Start/End: Complemental strand, 38133190 - 38133108
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactc 598  Q
    ||||||||||||||||||||||||  ||||| || | ||| |  ||||||| ||||||    |||||||||||||||||||||    
T  38133190 aattcggcagttaactgccgaggggcatttgggttaattattaatgtttcttagccaatgacaatgtgtcaacaacaatactc 38133108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 552 - 598
Target Start/End: Complemental strand, 41855348 - 41855302
Alignment:
Q  552 tttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactc 598  Q
    ||||||| ||||||||||||| |  ||||||||||||||||||||||    
T  41855348 tttactcatgtttctcagccatatgaaatgtgtcaacaacaatactc 41855302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 575
Target Start/End: Original strand, 1116251 - 1116303
Alignment:
Q  523 cagttaactgccgagg-gatatttgagtaatttactcgtgtttctcagccaaac 575  Q
    |||||||||||||| | ||||||||| ||||||||| |||||||||||||||||    
T  1116251 cagttaactgccgatgagatatttga-taatttacttgtgtttctcagccaaac 1116303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 493 - 598
Target Start/End: Original strand, 3086464 - 3086569
Alignment:
Q  493 ttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaaca 592  Q
    |||| ||||||||||| |   ||| |||| ||||||||||||||  || |||| ||||||||| |||||||||||||   |||| ||||||| || | ||    
T  3086464 ttaactgcagccggttctttaaaatttcgacagttaactgccgaatgacatttaagtaatttattcgtgtttctcagttgaactgaatgtgtgaagagca 3086563  T
Q  593 atactc 598  Q
    ||||||    
T  3086564 atactc 3086569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 562
Target Start/End: Complemental strand, 43362339 - 43362294
Alignment:
Q  517 attcggcagttaactgccgagggatatttgagtaatttactcgtgt 562  Q
    |||| |||||||||||||||| |  |||||||||||||||||||||    
T  43362339 attcagcagttaactgccgagaggcatttgagtaatttactcgtgt 43362294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 303; Significance: 1e-170; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 21 - 473
Target Start/End: Original strand, 37422595 - 37423051
Alignment:
Q  21 tttgacgtgaaaaaactatatcaaattgaatactgattttaaatttgaattttgcagtttgacatgaaattggtctctcaatccctttcacgagtaccct 120  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||  ||| |||||||||||||| ||||||||    
T  37422595 tttgacgtgaaaaaactatatcaaattgaatactgattttcaatttg--ttttgcagtttgacatgaaatttttctgtcaatccctttcacaagtaccct 37422692  T
Q  121 tannnnnnncacggatctagtatattgattcatggcctttcttgtaagaacccaaaaacacatacaaataaaaatcaatgagtctgagaatnnnnnnngc 220  Q
    ||       |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||       ||    
T  37422693 tattgttt-cacaaatctagtatattgattcatggcctttcttgtaagaacccaaaaacacatacaaataaaaatcgatgagtctgagaataaaaaaagc 37422791  T
Q  221 tagattgttaaaatattgttgagttgaaatgttaaagctacaagcataaggaatttttgatacccatat-----gaatagaatctcataggattcaagac 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||||||| |||||||||||||| ||    
T  37422792 tagattgttaaaatattgttgagttgaaatgttaaagctacaagcataaggaatttttgatacccatatgatatgaatagaacctcataggattcaaaac 37422891  T
Q  316 ccattgcaatttgaagcaacttaaaactgtagtgtcaccgaaacaaaaataaacagtgaatttggcttcctttggtgggt--gagagatgagagagaatg 413  Q
    ||||||||||||||||| |||||||| |||||||| ||||||||||| |||||||||| |||||||||||||||||||||  ||||||||||||||||||    
T  37422892 ccattgcaatttgaagccacttaaaagtgtagtgttaccgaaacaaacataaacagtggatttggcttcctttggtgggtgagagagatgagagagaatg 37422991  T
Q  414 gttagggaagataggataaaaaattcagtgtagagagtgcatgataagattatgttcttc 473  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  37422992 gttagggaagataggataaaaaattcagtgtagagagtgcatgataagaacatgttcttc 37423051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 480 - 598
Target Start/End: Original strand, 13761064 - 13761182
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||||| |   ||| |  |||||||||||||||||||  ||||||||||||||||||||||||||| |||||| |||    
T  13761064 ttttcctcggcagttaactgcagccggttctttaaaattgaggcagttaactgccgaggggcatttgagtaatttactcgtgtttctcatccaaaccaaa 13761163  T
Q  580 tgtgtcaacaacaatactc 598  Q
    |||||||||||||||||||    
T  13761164 tgtgtcaacaacaatactc 13761182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 484 - 594
Target Start/End: Complemental strand, 4208445 - 4208335
Alignment:
Q  484 cctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtg 583  Q
    ||||| ||||||| |||||||||||     ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||  ||||| |||||||    
T  4208445 cctcggcagttaactgcagccggttccttcaaaattcggcagttaactgccgaaggatatttgagtaaattactcgtgtttctcaatcaaaccaaatgtg 4208346  T
Q  584 tcaacaacaat 594  Q
    |||||||||||    
T  4208345 tcaacaacaat 4208335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 474 - 594
Target Start/End: Complemental strand, 50036907 - 50036786
Alignment:
Q  474 ttttcattttcctcgacagttaattgcagccggttttacgaaaa-ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagcca 572  Q
    ||||||||||| |||  |||||| ||||||||| ||   ||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  50036907 ttttcattttcttcggtagttaactgcagccgggttctagaaaacttcggcagttaactgccgagggacatttgagtaatttacttgtgtttctcagcca 50036808  T
Q  573 aactaaatgtgtcaacaacaat 594  Q
    ||  ||||||||||||| ||||    
T  50036807 aatcaaatgtgtcaacagcaat 50036786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 482 - 602
Target Start/End: Complemental strand, 7943025 - 7942905
Alignment:
Q  482 ttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatg 581  Q
    ||||||| ||||||| |||||||| || |   ||| || |||||||||||||||||| | ||||||||||||||||| ||||| |||||||||  |||||    
T  7943025 ttcctcggcagttaactgcagccgattcttttaaattttggcagttaactgccgaggaaaatttgagtaatttactcatgtttttcagccaaatcaaatg 7942926  T
Q  582 tgtcaacaacaatactcaaaa 602  Q
    |||| ||||||||||||||||    
T  7942925 tgtccacaacaatactcaaaa 7942905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 474 - 602
Target Start/End: Original strand, 19915332 - 19915455
Alignment:
Q  474 ttttcattttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaa 573  Q
    |||| |||||||||| ||||||| |||||||||||| |    ||||||||||||||||||||| ||  |||||||||||||||||||||||||||||| |    
T  19915332 ttttaattttcctcggcagttaactgcagccggtttcat---aattcggcagttaactgccgaagggcatttgagtaatttactcgtgtttctcagcc-a 19915427  T
Q  574 actaaatgtgtcaacaacaatactcaaaa 602  Q
     || |||||||||||| |||| |||||||    
T  19915428 gct-aatgtgtcaacagcaattctcaaaa 19915455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 12627290 - 12627173
Alignment:
Q  482 ttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatg 581  Q
    ||||||| ||||||| |||| |||||| |   ||| ||||||| |||||| |||| || |||||| |||| ||||||||||||||||||||||| |||||    
T  12627290 ttcctcggcagttaactgcacccggttctttaaaatttcggcaattaactaccgaagggtatttgggtaaattactcgtgtttctcagccaaaccaaatg 12627191  T
Q  582 tgtcaacaacaatactca 599  Q
    ||| ||||||||||||||    
T  12627190 tgtgaacaacaatactca 12627173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 47653727 - 47653838
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||||||||    |||||||||||||||||||||| |  ||||| |||| ||||| ||||||||||||||||   ||    
T  47653727 ttttcctcggcagttaactgcagccggttttat---aattcggcagttaactgccgagaggcatttgggtaaattacttgtgtttctcagccaaaggtaa 47653823  T
Q  580 tgtgtcaacaacaat 594  Q
    |||||||||||||||    
T  47653824 tgtgtcaacaacaat 47653838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 482 - 601
Target Start/End: Complemental strand, 5329174 - 5329055
Alignment:
Q  482 ttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatg 581  Q
    ||||||| ||||||| |||| |||||| |   ||| |||||||||||||||| ||  | |||||| |||| ||| ||||||||||||||||||| |||||    
T  5329174 ttcctcggcagttaactgcaaccggttctttaaaatttcggcagttaactgctgaatggtatttgggtaaattattcgtgtttctcagccaaaccaaatg 5329075  T
Q  582 tgtcaacaacaatactcaaa 601  Q
    ||| ||||||||||||||||    
T  5329074 tgtgaacaacaatactcaaa 5329055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 480 - 596
Target Start/End: Original strand, 28456741 - 28456854
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||| |||||| ||||||||||| ||    |||||||||||||||||||||||| |||||| |||  |||||||||||| ||||||||   | |    
T  28456741 ttttcctcgatagttaactgcagccggttctat---aattcggcagttaactgccgaggggtatttgggtagattactcgtgtttgtcagccaatgcata 28456837  T
Q  580 tgtgtcaacaacaatac 596  Q
    |||||||||||||||||    
T  28456838 tgtgtcaacaacaatac 28456854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 516 - 573
Target Start/End: Complemental strand, 26769183 - 26769126
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaa 573  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  26769183 aattcggcagttaactgccgagagatatttgagtaaattactcgtgtttctcagccaa 26769126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 516 - 601
Target Start/End: Complemental strand, 45780250 - 45780165
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaaa 601  Q
    |||||| |||||||||||||||||| |||||||||| |||||| ||||||||||||||   | |||||||||||||||| ||||||    
T  45780250 aattcgacagttaactgccgagggacatttgagtaaattactcatgtttctcagccaatgcatatgtgtcaacaacaattctcaaa 45780165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 485 - 580
Target Start/End: Complemental strand, 42290344 - 42290249
Alignment:
Q  485 ctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaat 580  Q
    |||||||||||| |||||||| ||||   ||| ||||||||||||||||| ||||  ||||||||||||||||||||||| ||| ||||| |||||    
T  42290344 ctcgacagttaactgcagccgattttttaaaatttcggcagttaactgccaaggggcatttgagtaatttactcgtgtttatcaaccaaattaaat 42290249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 4883286 - 4883172
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||  |||   ||| |||||||||||||||  ||||| ||||||||||||||||||||||  | ||||||||| |||    
T  4883286 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgttgaggggtatttgagtaatttactcgtgtgacacagccaaaccaaa 4883187  T
Q  580 tgtgtcaacaacaat 594  Q
    ||||  |||||||||    
T  4883186 tgtgggaacaacaat 4883172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 525 - 587
Target Start/End: Original strand, 5330079 - 5330140
Alignment:
Q  525 gttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaa 587  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||    
T  5330079 gttaactgccgaagaatatttgagtaatttactcgtgtttctcagccaaac-aaatgtgtcaa 5330140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 518 - 576
Target Start/End: Original strand, 48228360 - 48228418
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaact 576  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||    
T  48228360 ttcggcagttaactgccgaaggacatttgagtaatttactcgtgtttttcagccaaact 48228418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 478 - 600
Target Start/End: Original strand, 49429153 - 49429275
Alignment:
Q  478 cattttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaacta 577  Q
    ||||||||||| ||  ||| ||||||||| |||   ||| ||||||||||||||||||| |   |||||||||||||||||||||||| || |||||||     
T  49429153 cattttcctcggcaactaactgcagccggatttctaaaacttcggcagttaactgccgaagagcatttgagtaatttactcgtgtttcacaaccaaactc 49429252  T
Q  578 aatgtgtcaacaacaatactcaa 600  Q
    |||||||||| | |||| |||||    
T  49429253 aatgtgtcaatagcaattctcaa 49429275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 519 - 600
Target Start/End: Complemental strand, 43011841 - 43011760
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaa 600  Q
    ||||||||||||||||||||| ||||||||||||||||||||||  | ||||||||| ||| |||  ||||||||| |||||    
T  43011841 tcggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctcaa 43011760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 21700866 - 21700977
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||||||||||| |    ||||||||||||||||||  ||||  ||||| |||| ||||| ||||||||||||||||   ||    
T  21700866 ttttcctcggcagttaactgcagccggtttcat---aattcggcagttaactgcttaggggcatttgggtaaattactagtgtttctcagccaaaggtaa 21700962  T
Q  580 tgtgtcaacaacaat 594  Q
    |||||||||||||||    
T  21700963 tgtgtcaacaacaat 21700977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 480 - 575
Target Start/End: Original strand, 586625 - 586720
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaac 575  Q
    ||||||||| ||||||| ||||||||  |||   ||| ||||||||||||||||||| || ||||||||||||||||||||||  | |||||||||    
T  586625 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagccaaac 586720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 514 - 569
Target Start/End: Original strand, 13149065 - 13149120
Alignment:
Q  514 aaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcag 569  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||    
T  13149065 aaaattcggcaattaactgctgaggggtatttgagtaatttactcgtgtttctcag 13149120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 19914519 - 19914400
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||  |||   ||| ||||| ||||||||||||||||  |||||||||||||||||||||  | ||||||||| | |    
T  19914519 ttttcctcggcagttaactgcagccgtatttctaaaacttcggaagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaacaaca 19914420  T
Q  580 tgtgtcaacaacaatactca 599  Q
    ||||  ||||||||| ||||    
T  19914419 tgtgggaacaacaattctca 19914400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 480 - 601
Target Start/End: Original strand, 51461873 - 51461991
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||  |||||| |||||||||||  ||   |||||||||||||||||||||| |  ||||| |||| |||||||||||||||||||||   | |    
T  51461873 ttttcctcggtagttaactgcagccggttccac---aattcggcagttaactgccgagtggcatttgggtaaattactcgtgtttctcagccaatgcata 51461969  T
Q  580 tgtgtcaacaacaatactcaaa 601  Q
    |||||||| |||||| ||||||    
T  51461970 tgtgtcaataacaattctcaaa 51461991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 480 - 562
Target Start/End: Complemental strand, 30194474 - 30194392
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgt 562  Q
    ||||||||| ||||||| ||||||||  |||   ||| ||||||||||||||||||| || ||||||||||||||||||||||    
T  30194474 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtgt 30194392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 480 - 600
Target Start/End: Original strand, 45780929 - 45781046
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||  |||||| |||||||||||   | | |||||| |||||||||| ||||||  ||||| |||| |||||||||||||||||||||   | |    
T  45780929 ttttcctcggtagttaactgcagccggtt---ccataattcgacagttaactgacgaggggcatttgggtaaattactcgtgtttctcagccaatgcata 45781025  T
Q  580 tgtgtcaacaacaatactcaa 600  Q
    ||||||||||||||| |||||    
T  45781026 tgtgtcaacaacaattctcaa 45781046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 516 - 594
Target Start/End: Original strand, 49502875 - 49502953
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||||||| ||||||| || ||||| |||| |||||||||||||||||||||   | ||||||||||||||||    
T  49502875 aattcggcagttaattgccgagagacatttgggtaaattactcgtgtttctcagccaatgcatatgtgtcaacaacaat 49502953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 521 - 594
Target Start/End: Original strand, 29356733 - 29356806
Alignment:
Q  521 ggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||||||||| ||||||  ||||||||| ||||||||||||||||| | |||||  |||||||||    
T  29356733 ggcagttaactgccgaggggtatttggataatttacttgtgtttctcagccaaacaacatgtgggaacaacaat 29356806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 514 - 599
Target Start/End: Complemental strand, 38119600 - 38119515
Alignment:
Q  514 aaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    |||||||| |||||||||||| | || |||||   ||| |||||||||| |||||| |||||||||||||||||||||||| ||||    
T  38119600 aaaattcgacagttaactgccaaagggtatttagataaattactcgtgtgtctcagtcaaactaaatgtgtcaacaacaattctca 38119515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 523 - 600
Target Start/End: Original strand, 42290835 - 42290912
Alignment:
Q  523 cagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaa 600  Q
    |||||||||| ||| |||||||||||||| |||||||| |||||||| ||||| ||| |||| |||| ||||||||||    
T  42290835 cagttaactgtcgaaggatatttgagtaaattactcgtatttctcagtcaaaccaaaagtgtgaacagcaatactcaa 42290912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 519 - 600
Target Start/End: Complemental strand, 47652741 - 47652660
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaa 600  Q
    |||||||||||||||||||||| |||||||||||||||||||||  | ||||||||| ||| |||  |||| |||| |||||    
T  47652741 tcggcagttaactgccgagggacatttgagtaatttactcgtgtgacacagccaaaccaaacgtgggaacagcaattctcaa 47652660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 518 - 594
Target Start/End: Complemental strand, 21141040 - 21140964
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||||| || ||| ||| ||||  |||| |||||||||| |||||||||||| ||||||||||||||||||    
T  21141040 ttcggcagttaattgtcgaaggacatttaggtaaattactcgtgtgtctcagccaaaccaaatgtgtcaacaacaat 21140964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 518 - 594
Target Start/End: Original strand, 36184344 - 36184420
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||| |||||||||| |||| | |||||||||||||||||||| |||||| ||||||  || |||||||||||||||    
T  36184344 ttcgacagttaactgtcgagaggtatttgagtaatttactcgtatttctcggccaaatcaattgtgtcaacaacaat 36184420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 478 - 602
Target Start/End: Complemental strand, 41453893 - 41453769
Alignment:
Q  478 cattttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaacta 577  Q
    ||||||||||| ||||||| ||||||||| |||   |    ||||||||||||| ||||||| | |||| |||||||||| ||||||||||||||||| |    
T  41453893 cattttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactaccgaggggtgtttgcgtaatttactagtgtttctcagccaaacaa 41453794  T
Q  578 aatgtgtcaacaacaatactcaaaa 602  Q
     | |||  ||||||||| |||||||    
T  41453793 caagtgggaacaacaattctcaaaa 41453769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 523 - 595
Target Start/End: Original strand, 47661531 - 47661603
Alignment:
Q  523 cagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaata 595  Q
    ||||||||| |||||||||||||  ||| |||||||||||||||||||| ||| | ||||||||||| |||||    
T  47661531 cagttaactaccgagggatattttggtattttactcgtgtttctcagcctaacaagatgtgtcaacatcaata 47661603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 480 - 583
Target Start/End: Complemental strand, 19161945 - 19161842
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||| |||   ||| |||||||||||||||||||  |  ||||||||||||||||| |||  | ||||||||| |||    
T  19161945 ttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaaaggcatttgagtaatttactcttgtggcacagccaaaccaaa 19161846  T
Q  580 tgtg 583  Q
    ||||    
T  19161845 tgtg 19161842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 519 - 594
Target Start/End: Original strand, 44470070 - 44470145
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||||||||||| ||||||  |||||||   ||||||||||||||||| | ||||||||||| ||||    
T  44470070 tcggcagttaactgccgaggggtatttggataatttaaatgtgtttctcagccaaacaacatgtgtcaacagcaat 44470145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 7943931 - 7944047
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||| |||||||| |||||| ||   | | |||||||||||||||| ||||| || |||||  ||| ||||| |||||||||||||||    ||    
T  7943931 ttttcctcgatagttaattacagccgatt---ccataattcggcagttaactaccgagagaaatttggataaattactagtgtttctcagccaatggcaa 7944027  T
Q  580 tgtgtcaacaacaatactca 599  Q
    ||||||||||||||| ||||    
T  7944028 tgtgtcaacaacaattctca 7944047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 18609144 - 18609028
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||||||||||| |    ||||||||||||||||| | ||||  ||||   ||| ||||| ||||||||||||||||   ||    
T  18609144 ttttcctcggcagttaactgcagccggtttcat---aattcggcagttaactgtcaaggggcattttgataaattactagtgtttctcagccaaaggtaa 18609048  T
Q  580 tgtgtcaacaacaatactca 599  Q
    ||||||||||||||| ||||    
T  18609047 tgtgtcaacaacaattctca 18609028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 36272371 - 36272315
Alignment:
Q  52 actgattttaaatttgaattttgcagtttgacatgaaattggtctctcaatccctttc 109  Q
    |||| |||| |||||||||||||| ||||||||||||||||||||| |||||||||||    
T  36272371 actggttttcaatttgaattttgctgtttgacatgaaattggtctc-caatccctttc 36272315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 6767937 - 6767886
Alignment:
Q  57 ttttaaatttgaattttgcagtttgacatgaaattggtctctcaatccctttc 109  Q
    |||| |||||||||||||| ||||||||||||||||||||| |||||||||||    
T  6767937 ttttcaatttgaattttgctgtttgacatgaaattggtctc-caatccctttc 6767886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 30195407 - 30195518
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||||||||||| |    |||||  |||||||||||||| ||  |||||||||||||||||||||  |  |||||||| |||    
T  30195407 ttttcctcggcagttaactgcagccggtttcat---aattcaacagttaactgccgaagggcatttgagtaatttactcgtgtggcatagccaaaccaaa 30195503  T
Q  580 tgtgtcaacaacaat 594  Q
    ||||  |||||||||    
T  30195504 tgtgggaacaacaat 30195518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 480 - 562
Target Start/End: Original strand, 37992570 - 37992649
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgt 562  Q
    ||||||||| ||||||| |||||||||||| |    ||||||||||||||||| ||||||||||||| |||| ||||| ||||    
T  37992570 ttttcctcggcagttaactgcagccggtttcat---aattcggcagttaactgtcgagggatatttgggtaaattactagtgt 37992649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 46909598 - 46909709
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||| |||||| |||||||| ||   | | |||||||||||||||| || | | | |||| |||||||||||||||||||||||| |||  | |    
T  46909598 ttttcctcgatagttaactgcagccgatt---ccataattcggcagttaactaccaaagaacatttaagtaatttactcgtgtttctcagctaaaacata 46909694  T
Q  580 tgtgtcaacaacaat 594  Q
    | |||||||||||||    
T  46909695 tctgtcaacaacaat 46909709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 490 - 594
Target Start/End: Complemental strand, 49395646 - 49395542
Alignment:
Q  490 cagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaaca 589  Q
    ||||||| ||||||||||| |   ||||||||||  |||||| |||| || ||||||   || |||||||||||| |||||||||  |||||||||||||    
T  49395646 cagttaactgcagccggttctttcaaaattcggctattaactaccgaagggtatttggacaaattactcgtgtttttcagccaaatcaaatgtgtcaaca 49395547  T
Q  590 acaat 594  Q
    |||||    
T  49395546 acaat 49395542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 49660876 - 49660765
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||| |||| |    ||||||||||||||||||| |||   ||||| |||| ||||| ||||||||||||||||   ||    
T  49660876 ttttcctcggcagttaactgcagccagtttcat---aattcggcagttaactgccaaggagcatttgggtaaattactagtgtttctcagccaaaggtaa 49660780  T
Q  580 tgtgtcaacaacaat 594  Q
    |||||||||| ||||    
T  49660779 tgtgtcaacagcaat 49660765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 523 - 601
Target Start/End: Original strand, 30910066 - 30910145
Alignment:
Q  523 cagttaactgccgaggga-tatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaaa 601  Q
    |||||||||||||||||  |||||| |||||||||| ||||||||||||||||| | |||||  |||| |||| ||||||    
T  30910066 cagttaactgccgagggggtatttgggtaatttacttgtgtttctcagccaaacaacatgtgggaacagcaattctcaaa 30910145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 483 - 589
Target Start/End: Original strand, 47505908 - 47506014
Alignment:
Q  483 tcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgt 582  Q
    ||||||| |||||| |||||||| ||||   ||| ||||||| |||||||||||| |  ||||   ||| |||||| ||| |||||||||||| ||||||    
T  47505908 tcctcgatagttaactgcagccgattttctaaaacttcggcaattaactgccgagaggcatttagataaattactcttgtgtctcagccaaaccaaatgt 47506007  T
Q  583 gtcaaca 589  Q
    |||||||    
T  47506008 gtcaaca 47506014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 594
Target Start/End: Original strand, 50269196 - 50269238
Alignment:
Q  552 tttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||||||||||||||||| | ||||||||||||||||    
T  50269196 tttactcgtgtttctcagccaaaccacatgtgtcaacaacaat 50269238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 480 - 588
Target Start/End: Complemental strand, 1167615 - 1167506
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgaggga-tatttgagtaatttactcgtgtttctcagccaaactaa 578  Q
    |||||||||| |||||| ||||| |||||||||      ||||||||||||||| |||||  |||||  ||| |||||| ||||||||||||||||| |     
T  1167615 ttttcctcgatagttaactgcagtcggttttacttttcctcggcagttaactgcagagggggtattttggtattttacttgtgtttctcagccaaaccac 1167516  T
Q  579 atgtgtcaac 588  Q
    ||||||||||    
T  1167515 atgtgtcaac 1167506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 569
Target Start/End: Original strand, 42572781 - 42572866
Alignment:
Q  484 cctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcag 569  Q
    ||||||||||||| ||||||||||||    |||||||| |||||||||| |||||| |||||  |||| || || |||||||||||    
T  42572781 cctcgacagttaactgcagccggtttcttcaaaattcgacagttaactgtcgaggggtatttaggtaaattgctggtgtttctcag 42572866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 481 - 599
Target Start/End: Original strand, 26607456 - 26607571
Alignment:
Q  481 tttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaat 580  Q
    |||||||| ||||||| |||||||||||   | | ||||||||||||||||||||||||  ||||  |||| |||||  | ||||||| ||||   | ||    
T  26607456 tttcctcggcagttaactgcagccggtt---ccataattcggcagttaactgccgaggggcatttaggtaaattactaatctttctcaaccaatgcatat 26607552  T
Q  581 gtgtcaacaacaatactca 599  Q
    |||||||||||||| ||||    
T  26607553 gtgtcaacaacaattctca 26607571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 480 - 562
Target Start/End: Complemental strand, 49875057 - 49874978
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgt 562  Q
    |||||||||| |||||| |||||||||||   | | ||||||||||||||||| ||||||| | || ||||| ||||||||||    
T  49875057 ttttcctcgatagttaactgcagccggtt---ccataattcggcagttaactgtcgagggacaatttagtaaattactcgtgt 49874978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 594
Target Start/End: Original strand, 6562926 - 6563001
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||||||||||||||||||  ||||||||  |||||| ||| ||  |  ||||||||||||| ||||    
T  6562926 tcggcagttaactgccgagggatatttggataatttacatgtgtttttcaaccctatcaaatgtgtcaacagcaat 6563001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 525 - 588
Target Start/End: Original strand, 13535685 - 13535748
Alignment:
Q  525 gttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaac 588  Q
    |||||||||||| |||||||| |||| ||||||||| ||||||||| | || | ||||||||||    
T  13535685 gttaactgccgaaggatattttagtattttactcgtatttctcagcgataccacatgtgtcaac 13535748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 562
Target Start/End: Complemental strand, 37991626 - 37991583
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgt 562  Q
    |||||||||||||| ||||||| |||||||||||||| ||||||    
T  37991626 tcggcagttaactgtcgagggacatttgagtaatttattcgtgt 37991583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 594
Target Start/End: Original strand, 41459270 - 41459345
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||||||| |||||| |||||  ||| |||||  ||||||||||||||||| | |||||| | |||||||    
T  41459270 tcggcagttaactgtcgaggggtattttggtattttacatgtgtttctcagccaaacaacatgtgttatcaacaat 41459345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 491 - 602
Target Start/End: Original strand, 50343999 - 50344110
Alignment:
Q  491 agttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaa 590  Q
    |||||| ||| |||||||||   ||| ||||||||||||||||||| |   ||||  |||| ||||||| || ||||||| ||||  |||||||||| ||    
T  50343999 agttaactgccgccggttttctaaaacttcggcagttaactgccgatgagcatttaggtaaattactcgcgtgtctcagctaaacctaatgtgtcaagaa 50344098  T
Q  591 caatactcaaaa 602  Q
    |||| |||||||    
T  50344099 caattctcaaaa 50344110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 573
Target Start/End: Complemental strand, 26606812 - 26606758
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaa 573  Q
    ||||||||||| | ||||||| |||||  ||| ||||||||||||||||||||||    
T  26606812 tcggcagttaattaccgaggggtattttggtattttactcgtgtttctcagccaa 26606758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 573
Target Start/End: Original strand, 35255356 - 35255410
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaa 573  Q
    |||||||||||||||||||||  |||   |||| |||||||||||||||||||||    
T  35255356 tcggcagttaactgccgaggggcattacggtaaattactcgtgtttctcagccaa 35255410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 540 - 598
Target Start/End: Complemental strand, 48455488 - 48455430
Alignment:
Q  540 atatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactc 598  Q
    ||||||| |||| |||||||||||||||| |||||  |||||||| |||| ||||||||    
T  48455488 atatttgggtaaattactcgtgtttctcaaccaaatcaaatgtgtgaacagcaatactc 48455430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 529 - 591
Target Start/End: Complemental strand, 51461149 - 51461087
Alignment:
Q  529 actgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaac 591  Q
    |||||||| | | ||||||||||||||||||| ||||||| |||||| | |||||| ||||||    
T  51461149 actgccgaagaacatttgagtaatttactcgtctttctcaaccaaaccagatgtgttaacaac 51461087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 490 - 539
Target Start/End: Original strand, 2425715 - 2425764
Alignment:
Q  490 cagttaattgcagccggttttacgaaaattcggcagttaactgccgaggg 539  Q
    ||||||| ||||||||| ||| | ||| ||||||||||||||||||||||    
T  2425715 cagttaactgcagccggatttccaaaacttcggcagttaactgccgaggg 2425764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 542 - 575
Target Start/End: Original strand, 12628211 - 12628244
Alignment:
Q  542 atttgagtaatttactcgtgtttctcagccaaac 575  Q
    |||||||||||||||||||||||||| |||||||    
T  12628211 atttgagtaatttactcgtgtttctcggccaaac 12628244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 480 - 536
Target Start/End: Original strand, 13636142 - 13636199
Alignment:
Q  480 ttttcctcgacagttaattgcagccgg-ttttacgaaaattcggcagttaactgccga 536  Q
    ||||||||| ||||||| ||||||||| |||| | ||| |||||||||||||||||||    
T  13636142 ttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccga 13636199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 490 - 567
Target Start/End: Original strand, 21268803 - 21268880
Alignment:
Q  490 cagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctc 567  Q
    |||||||||||||||| || |   ||| ||| | |||||| | |||| |||||||||||||| |||||||||||||||    
T  21268803 cagttaattgcagccgattctttaaaatttcagaagttaagtcccgaaggatatttgagtaaattactcgtgtttctc 21268880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 7e-39; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 20208563 - 20208449
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||||| ||  ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  20208563 ttttcctcggcagttaactgcagccggttctagtaaacttcggcagttaactgccgagggacatttgagtaatttactcgtgtttctcagccaaaccaaa 20208464  T
Q  580 tgtgtcaacaacaat 594  Q
    |||||||||||||||    
T  20208463 tgtgtcaacaacaat 20208449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 18884524 - 18884638
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||| |||| ||||||| ||||||||||||| | ||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||    
T  18884524 tttttctcggcagttaactgcagccggtttttcaaaatttcggcagttaactgccgaggggcatttgagtaatttactcgtgtttctcagccaaaccaaa 18884623  T
Q  580 tgtgtcaacaacaat 594  Q
    |||||||||| ||||    
T  18884624 tgtgtcaacatcaat 18884638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 518 - 598
Target Start/End: Complemental strand, 27872394 - 27872314
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactc 598  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||    
T  27872394 ttcggcagttaactgccgatggatatttgagtaatttactcgtgtttctcagccaaaccaaatatgtcaacatcaatactc 27872314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 48807406 - 48807523
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||  ||||||| ||||||||||| |   ||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  48807406 ttttcctcagcagttaactgcagccggttctttaaaatttcgacagttaactgccgagggacatttgagtaatttactcgtgtttctcagccaaaccaaa 48807505  T
Q  580 tgtgtcaacaacaatactca 599  Q
      ||||||||||||||||||    
T  48807506 --tgtcaacaacaatactca 48807523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 480 - 600
Target Start/End: Original strand, 51037488 - 51037608
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||||||||||||  |||   ||| ||||||||||||||||||||||| |||||||||||||||||||||  | |||||||||||||    
T  51037488 ttttcctcggcagttaattgcagccgtatttctaaaacttcggcagttaactgccgagggacatttgagtaatttactcgtgtggcacagccaaactaaa 51037587  T
Q  580 tgtgtcaacaacaatactcaa 600  Q
    ||||  ||||||||| |||||    
T  51037588 tgtgggaacaacaattctcaa 51037608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 43176648 - 43176767
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||||| |||| |   ||| ||||||||||||||| ||| || |||||  |||| ||||||||||||||||||||||| |||    
T  43176648 ttttcctcggcagttaactgcagcaggttctttaaaatttcggcagttaactgtcgaagggtatttaggtaaattactcgtgtttctcagccaaaccaaa 43176747  T
Q  580 tgtgtcaacaacaatactca 599  Q
    ||||| ||||||||||||||    
T  43176748 tgtgtgaacaacaatactca 43176767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 479 - 598
Target Start/End: Complemental strand, 48806539 - 48806420
Alignment:
Q  479 attttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaa 578  Q
    |||||||||| ||||||| ||||||||||| |   ||| |||| ||||||||||||||  | ||||||  ||| ||||||||||||||||||||||| ||    
T  48806539 attttcctcggcagttaactgcagccggttctttaaaatttcgacagttaactgccgaaaggtatttggataaattactcgtgtttctcagccaaaccaa 48806440  T
Q  579 atgtgtcaacaacaatactc 598  Q
    |||||| |||||||||||||    
T  48806439 atgtgtgaacaacaatactc 48806420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 480 - 598
Target Start/End: Complemental strand, 11565919 - 11565801
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||||||||||| ||||||||||| |    || ||||||| ||||| ||| |  || |||||| |||||||||||||||||| |||||||| |||    
T  11565919 ttttcctcgacagttaactgcagccggttctttagaatttcggcaattaaccgccaaaagacatttgaataatttactcgtgtttctaagccaaaccaaa 11565820  T
Q  580 tgtgtcaacaacaatactc 598  Q
    |||||||||||||||||||    
T  11565819 tgtgtcaacaacaatactc 11565801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 524 - 594
Target Start/End: Complemental strand, 18411207 - 18411137
Alignment:
Q  524 agttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||| ||||||||| || |||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  18411207 agtttactgccgagagacatttgaataatttactcgtgtttctcagccaaaccaaatgtgtcaacaacaat 18411137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 516 - 594
Target Start/End: Original strand, 28322173 - 28322251
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||   | ||||||||||||||||    
T  28322173 aattcggcagttaactaccgagggacatttgagtaaattactcgtgtttctcagccaatgcatatgtgtcaacaacaat 28322251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 40833630 - 40833744
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||  |||   ||| |||||||||||||||||||||| ||||||||||||||||||||||  | |||||||| ||||    
T  40833630 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccaaagtaaa 40833729  T
Q  580 tgtgtcaacaacaat 594  Q
     |||  |||||||||    
T  40833730 agtgggaacaacaat 40833744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 483 - 587
Target Start/End: Original strand, 28084013 - 28084115
Alignment:
Q  483 tcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgt 582  Q
    |||||| ||||||| |||||| || |||   ||| ||||||||||| ||||||||  |||||||||||||||||| |||||||||||||||||| |||||    
T  28084013 tcctcggcagttaactgcagctggatttctaaaacttcggcagttatctgccgag--atatttgagtaatttacttgtgtttctcagccaaactcaatgt 28084110  T
Q  583 gtcaa 587  Q
    |||||    
T  28084111 gtcaa 28084115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 37855910 - 37855793
Alignment:
Q  482 ttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatg 581  Q
    ||||||| ||||||| ||||||||||| |   ||| ||||| ||||||||||||| | |||||| ||||||||| |||||||||||||  |||| | ||     
T  37855910 ttcctcggcagttaactgcagccggttctttaaaatttcggaagttaactgccgatgaatatttaagtaatttattcgtgtttctcagttaaaccagatc 37855811  T
Q  582 tgtcaacaacaatactca 599  Q
    ||||||||||||||||||    
T  37855810 tgtcaacaacaatactca 37855793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 518 - 602
Target Start/End: Complemental strand, 43175749 - 43175665
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaaaa 602  Q
    |||||||| |||||||| | ||  ||||||||||||||||| || ||||||||||||| ||||||||||||| ||||||||||||    
T  43175749 ttcggcagctaactgcctaagggcatttgagtaatttactcatgcttctcagccaaaccaaatgtgtcaacagcaatactcaaaa 43175665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 480 - 583
Target Start/End: Original strand, 21022908 - 21023011
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||  |||   ||| ||||||||||||||||||||||  |||||||||||||||||||||  | ||||||||| |||    
T  21022908 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaaccaaa 21023007  T
Q  580 tgtg 583  Q
    ||||    
T  21023008 tgtg 21023011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 480 - 595
Target Start/End: Original strand, 37856764 - 37856879
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||  ||| ||||||||||| |   ||| ||||||||||||||||| | ||||||||  |||| |||||||||||||| |||||||| |||    
T  37856764 ttttcctcggcacctaactgcagccggttctttaaaatttcggcagttaactgccaaaggatatttaggtaaattactcgtgtttcttagccaaaccaaa 37856863  T
Q  580 tgtgtcaacaacaata 595  Q
    ||||| ||||||||||    
T  37856864 tgtgtgaacaacaata 37856879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 480 - 562
Target Start/End: Complemental strand, 14200614 - 14200532
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgt 562  Q
    ||||||||| ||||||| ||||||||  |||   ||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  14200614 ttttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactgccgagggatatttgagtaatttactcgtgt 14200532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 480 - 600
Target Start/End: Original strand, 14201550 - 14201667
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||||||||||| |    ||||||||||||||||||||||||  |||||||||||||||||||||  |  |||||||| |||    
T  14201550 ttttcctcggcagttaactgcagccggtttcat---aattcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcatagccaaaccaaa 14201646  T
Q  580 tgtgtcaacaacaatactcaa 600  Q
    ||||  |||| |||| |||||    
T  14201647 tgtgggaacagcaattctcaa 14201667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 52469063 - 52469177
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||| |||||||||||| |||||||||||  |  ||| ||||  |||||||||  |||||  |||||||||||||||||||||||||||||||||  |||    
T  52469063 tttttctcgacagttaactgcagccggttcgagtaaacttcgatagttaactgttgaggggcatttgagtaatttactcgtgtttctcagccaaatcaaa 52469162  T
Q  580 tgtgtcaacaacaat 594  Q
    | |||||||| ||||    
T  52469163 tatgtcaacatcaat 52469177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 15999819 - 15999939
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaat-tcggcagttaactgccgaggga-tatttgagtaatttactcgtgtttctcagccaaacta 577  Q
    ||||||||| ||||||||||||||||| ||| | ||  | |||||||||||||||||||||  |||||| |||||||||| ||||||||||||||||| |    
T  15999819 ttttcctcggcagttaattgcagccggattt-caaatttctcggcagttaactgccgagggggtatttgggtaatttacttgtgtttctcagccaaacaa 15999917  T
Q  578 aatgtgtcaacaacaatactca 599  Q
     |||||  ||||||||| ||||    
T  15999918 catgtgggaacaacaattctca 15999939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 479 - 601
Target Start/End: Original strand, 26792263 - 26792386
Alignment:
Q  479 attttcctcgacagttaattgcagccggttttacgaaaa--ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaact 576  Q
    |||||||||| ||||||| ||| |||||||| || ||||  |||||||||||| |||||| ||  |||||||||||||||||||||  | |||||||||     
T  26792263 attttcctcggcagttaactgccgccggttt-actaaaaacttcggcagttaattgccgaagggcatttgagtaatttactcgtgtggcacagccaaacc 26792361  T
Q  577 aaatgtgtcaacaacaatactcaaa 601  Q
    |||||||  ||||||||| ||||||    
T  26792362 aaatgtgggaacaacaattctcaaa 26792386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 518 - 598
Target Start/End: Complemental strand, 40061116 - 40061036
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactc 598  Q
    |||| |||||||||||||||||  ||||  |||| |||||||||| | |||||||||||||||||||||||| ||||||||    
T  40061116 ttcgacagttaactgccgaggggcatttaggtaaattactcgtgtgtttcagccaaactaaatgtgtcaacagcaatactc 40061036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 526 - 588
Target Start/End: Original strand, 2449674 - 2449736
Alignment:
Q  526 ttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaac 588  Q
    ||||||||||||||| ||||||||||||||||||||||| || || |||| ||||||||||||    
T  2449674 ttaactgccgagggacatttgagtaatttactcgtgtttatcggctaaaccaaatgtgtcaac 2449736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 484 - 594
Target Start/End: Original strand, 9013893 - 9014003
Alignment:
Q  484 cctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtg 583  Q
    |||||| |||||| |||||||||||     ||||||||||||||||||||||| ||  ||||  |||| |||||||||| |||||||| ||| |||||||    
T  9013893 cctcgatagttaactgcagccggttgccacaaaattcggcagttaactgccgaagggaatttaggtaaattactcgtgtgtctcagcctaaccaaatgtg 9013992  T
Q  584 tcaacaacaat 594  Q
    |||||| ||||    
T  9013993 tcaacagcaat 9014003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 520 - 594
Target Start/End: Original strand, 20209387 - 20209461
Alignment:
Q  520 cggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||||| ||||||||||||||||||||  |   | |||||| ||||||||||||||||||||||||    
T  20209387 cggcagttaactgccaagggatatttgagtaatttatccacatctctcagtcaaactaaatgtgtcaacaacaat 20209461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 46254468 - 46254582
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||  |||   ||| |||||||||||||| ||||| ||||||||| ||||||||| ||||  | |||||||||||||    
T  46254468 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactaccgagagatatttgaataatttacttgtgtggcacagccaaactaaa 46254567  T
Q  580 tgtgtcaacaacaat 594  Q
     |||  |||||||||    
T  46254568 agtgggaacaacaat 46254582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 28157631 - 28157515
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||  ||||||||| ||||||||   | | |||||||||||||| |||||||||  |||||  ||| |||||||||||||||||||||   | |    
T  28157631 ttttcctcggtagttaattgtagccggtt---ccataattcggcagttaattgccgaggggcatttggataaattactcgtgtttctcagccaatacata 28157535  T
Q  580 tgtgtcaacaacaatactca 599  Q
    ||||||||||||||| ||||    
T  28157534 tgtgtcaacaacaattctca 28157515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 594
Target Start/End: Original strand, 40061182 - 40061295
Alignment:
Q  481 tttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaat 580  Q
    ||||||||  |||||| |||| ||||||||   ||| |||||| |||||||||||| ||  ||||  |||| |||||||||| |||||||||||| ||||    
T  40061182 tttcctcggtagttaactgcaaccggttttctaaaacttcggcggttaactgccgatgggcatttaggtaaattactcgtgtgtctcagccaaaccaaat 40061281  T
Q  581 gtgtcaacaacaat 594  Q
     |||||||||||||    
T  40061282 atgtcaacaacaat 40061295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 480 - 583
Target Start/End: Complemental strand, 46253536 - 46253436
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||||||||||| |    ||||||||||||||||||||| ||  |||||||||||||||||||||  | || |||||||| |    
T  46253536 ttttcctcggcagttaactgcagccggtttcat---aattcggcagttaactgccgatgggcatttgagtaatttactcgtgtggcacaaccaaactata 46253440  T
Q  580 tgtg 583  Q
    ||||    
T  46253439 tgtg 46253436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 522 - 599
Target Start/End: Original strand, 46439624 - 46439701
Alignment:
Q  522 gcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    |||||||||| |||| ||||||||  ||| |||||||||||||||||||| ||| | |||||||||||||||| ||||    
T  46439624 gcagttaactaccgatggatattttggtattttactcgtgtttctcagcctaacaagatgtgtcaacaacaattctca 46439701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 491 - 599
Target Start/End: Original strand, 8111446 - 8111554
Alignment:
Q  491 agttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaa 590  Q
    |||||| ||||||||||||    ||| |||| || ||||||||||| ||| ||||   ||| |||||||||| |||||||||||| ||||||||||||||    
T  8111446 agttaactgcagccggtttccacaaacttcgacaattaactgccgatggacatttagataaattactcgtgtatctcagccaaaccaaatgtgtcaacaa 8111545  T
Q  591 caatactca 599  Q
    |||| ||||    
T  8111546 caattctca 8111554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 518 - 594
Target Start/End: Original strand, 21343432 - 21343508
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||||||||||||| |||||||||||||  |||||||||||||| |||||   | ||||||||||| ||||    
T  21343432 ttcggcagttaactgccgagagatatttgagtaaactactcgtgtttctcggccaatgcatatgtgtcaacagcaat 21343508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 480 - 600
Target Start/End: Complemental strand, 23220731 - 23220611
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||| ||| ||||||| ||||||||  |||   ||| ||||||||||||||||| | || ||||||||||||||||||||||  | ||||||||| |||    
T  23220731 ttttcatcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccaaagggtatttgagtaatttactcgtgtggcacagccaaaccaaa 23220632  T
Q  580 tgtgtcaacaacaatactcaa 600  Q
     |||  ||||||||| |||||    
T  23220631 agtgggaacaacaattctcaa 23220611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 522 - 594
Target Start/End: Complemental strand, 37295274 - 37295202
Alignment:
Q  522 gcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||||||||  ||||| |||| ||||| ||||||||||||||||   |||||||||||||||||    
T  37295274 gcagttaactgccgaggggcatttgggtaaattactagtgtttctcagccaaatgtaatgtgtcaacaacaat 37295202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 38368281 - 38368170
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||||||||||| |    ||||||||||||||||||||| ||| |||||  ||| ||||||||||  |  ||||||||||||    
T  38368281 ttttcctcggcagttaactgcagccggtttcat---aattcggcagttaactgccgaaggacatttggataaattactcgtgtggcatagccaaactaaa 38368185  T
Q  580 tgtgtcaacaacaat 594  Q
    ||||  |||||||||    
T  38368184 tgtgggaacaacaat 38368170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 480 - 560
Target Start/End: Original strand, 38369202 - 38369282
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgt 560  Q
    ||||||||| ||||||| ||||||||  |||   ||| ||||||||||||||||||| || ||||||||||||||||||||    
T  38369202 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgt 38369282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 40963004 - 40962893
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||  |||||| |||||||||||   | | ||||||||||| ||||||| ||||  ||||| |||| |||||||||||||||||||||   | |    
T  40963004 ttttcctcggtagttaactgcagccggtt---ccataattcggcagtcaactgccaaggggcatttgggtaaattactcgtgtttctcagccaatgcata 40962908  T
Q  580 tgtgtcaacaacaat 594  Q
    |||||||||||||||    
T  40962907 tgtgtcaacaacaat 40962893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 483 - 571
Target Start/End: Original strand, 51429326 - 51429414
Alignment:
Q  483 tcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagcc 571  Q
    |||||||||||||| ||||||||||||  | ||||||||||||||||||  |||||  |||||  |||| ||||| |||||||||||||    
T  51429326 tcctcgacagttaactgcagccggtttctccaaaattcggcagttaactctcgaggagtatttatgtaaattactggtgtttctcagcc 51429414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 491 - 594
Target Start/End: Complemental strand, 30704060 - 30703957
Alignment:
Q  491 agttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaa 590  Q
    |||||| ||||||||||||    |||||| ||||||||||||||||  |  |||| ||||| |||||||||| |||||||| ||| |||||||||||||     
T  30704060 agttaactgcagccggtttccacaaaatttggcagttaactgccgaatggcatttaagtaaattactcgtgtgtctcagcctaaccaaatgtgtcaacat 30703961  T
Q  591 caat 594  Q
    ||||    
T  30703960 caat 30703957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 518 - 593
Target Start/End: Complemental strand, 43210397 - 43210322
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaa 593  Q
    ||||| |||||||||  || ||||||||  ||| |||||||||||||||| ||||||||| |||||||||||||||    
T  43210397 ttcggtagttaactgttgatggatattttggtattttactcgtgtttctcggccaaactacatgtgtcaacaacaa 43210322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 519 - 608
Target Start/End: Complemental strand, 15995736 - 15995646
Alignment:
Q  519 tcggcagttaactgccgaggga-tatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaaaagggatt 608  Q
    |||||| ||||||||||||||  |||||| |||||||||| ||||||||||||||||| | |||||  |||| |||| ||||||| |||||    
T  15995736 tcggcatttaactgccgagggggtatttgggtaatttacttgtgtttctcagccaaacaacatgtgggaacagcaattctcaaaaaggatt 15995646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 480 - 600
Target Start/End: Original strand, 23221690 - 23221807
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||||||||||| |    ||||||||||||||||||||| ||  |||||| ||| ||||||||||  |  |||||||| |||    
T  23221690 ttttcctcggcagttaactgcagccggtttcat---aattcggcagttaactgccgaagggcatttgaataaattactcgtgtggcatagccaaaccaaa 23221786  T
Q  580 tgtgtcaacaacaatactcaa 600  Q
    ||||  ||||||||| |||||    
T  23221787 tgtgggaacaacaattctcaa 23221807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 594
Target Start/End: Original strand, 33812878 - 33812956
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||||||||||||||| || ||||| |||| |||||| ||||||||| ||||   | ||||||||||||||||    
T  33812878 aattcggcagttaactgccgagtgacatttgggtaaattactcatgtttctcaaccaatgcatatgtgtcaacaacaat 33812956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 482 - 572
Target Start/End: Original strand, 37296207 - 37296297
Alignment:
Q  482 ttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagcca 572  Q
    ||||||| || |||| ||||||||||| |   ||| ||||||||||||||| ||| ||  ||||||||||||||||||||||| |||||||    
T  37296207 ttcctcggcaattaactgcagccggttcttttaaatttcggcagttaactgtcgaagggcatttgagtaatttactcgtgtttatcagcca 37296297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 478 - 575
Target Start/End: Complemental strand, 3403902 - 3403805
Alignment:
Q  478 cattttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaac 575  Q
    ||||||||||| ||||||| ||||||||| |||   |    |||||||||||||||||| || |||||| |||||||||| || ||||||||||||||    
T  3403902 cattttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaagggtatttgcgtaatttacttgtatttctcagccaaac 3403805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 36480560 - 36480676
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||  |||||| |||||||||||   | | ||||||||||||||||||||||| | |||||  ||| ||||| |||||| ||||||||   | |    
T  36480560 ttttcctcggtagttaactgcagccggtt---ccataattcggcagttaactgccgaggaacatttggataaattacttgtgtttatcagccaatgcata 36480656  T
Q  580 tgtgtcaacaacaatactca 599  Q
    ||||||||||||||| ||||    
T  36480657 tgtgtcaacaacaattctca 36480676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 482 - 594
Target Start/End: Original strand, 7485683 - 7485795
Alignment:
Q  482 ttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatg 581  Q
    ||||||| ||||||||||||||||  |||   ||| |||| |||||||||||||||||  ||||| |||| ||||||||||  |  |||||||| |||||    
T  7485683 ttcctcggcagttaattgcagccgtatttctaaaacttcgacagttaactgccgaggggcatttgggtaaattactcgtgtggcatagccaaaccaaatg 7485782  T
Q  582 tgtcaacaacaat 594  Q
    ||  |||||||||    
T  7485783 tgggaacaacaat 7485795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 578
Target Start/End: Original strand, 18411207 - 18411267
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaa 578  Q
    |||| |||||||||| ||||||  |||| ||||||||||||||||||||||| ||||||||    
T  18411207 ttcgacagttaactgtcgaggggcatttaagtaatttactcgtgtttctcagtcaaactaa 18411267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 519 - 594
Target Start/End: Complemental strand, 19069201 - 19069125
Alignment:
Q  519 tcggcagttaactgccgaggga-tatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||| ||||||||||||||  |||||| |||||||||| ||||||||||||||||| | |||||  |||||||||    
T  19069201 tcggcatttaactgccgagggggtatttgggtaatttacttgtgtttctcagccaaacaacatgtgggaacaacaat 19069125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 519 - 587
Target Start/End: Complemental strand, 29306574 - 29306506
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaa 587  Q
    |||||||||||||||||||||  ||||| |||| ||||| ||||||||||||||||   ||||||||||    
T  29306574 tcggcagttaactgccgaggggcatttgggtaaattactagtgtttctcagccaaaggtaatgtgtcaa 29306506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 562
Target Start/End: Complemental strand, 31242268 - 31242186
Alignment:
Q  481 tttcctcgacagttaattgcagccggttttacgaaaa--ttcggcagttaactgccgagggatatttgagtaatttactcgtgt 562  Q
    |||||||| ||||||| ||| |||||||| || ||||  ||||||||||||||||||| ||  |||||||||||||||||||||    
T  31242268 tttcctcggcagttaactgccgccggttt-actaaaaacttcggcagttaactgccgaagggcatttgagtaatttactcgtgt 31242186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 55587408 - 55587297
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||||||||||| |    ||||||||||||||||||||| ||  ||||| |||| ||||||||||  |  |||||||| |||    
T  55587408 ttttcctcggcagttaactgcagccggtttcat---aattcggcagttaactgccgaagggcatttgggtaaattactcgtgtggcatagccaaaccaaa 55587312  T
Q  580 tgtgtcaacaacaat 594  Q
    ||||  |||||||||    
T  55587311 tgtgggaacaacaat 55587297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 524 - 571
Target Start/End: Complemental strand, 4783655 - 4783608
Alignment:
Q  524 agttaactgccgagggatatttgagtaatttactcgtgtttctcagcc 571  Q
    |||||||||||||| | ||||||||||| |||||||||||||||||||    
T  4783655 agttaactgccgagaggtatttgagtaaattactcgtgtttctcagcc 4783608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 518 - 601
Target Start/End: Complemental strand, 21015754 - 21015671
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaaa 601  Q
    |||| ||||||||||||||||| |||||||||||||||||||| |  | || |||||| |||| ||  ||||||||| ||||||    
T  21015754 ttcgacagttaactgccgaggggtatttgagtaatttactcgtatggcacaaccaaaccaaatatgagaacaacaattctcaaa 21015671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 483 - 598
Target Start/End: Original strand, 50023570 - 50023685
Alignment:
Q  483 tcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgt 582  Q
    ||||||| | |||| |||||||| ||||   ||| || |||||||||||||||||||  ||||   ||| ||||| |||| ||||||||||||||||| |    
T  50023570 tcctcgataattaactgcagccgattttctaaaactttggcagttaactgccgaggggcatttagataaattacttgtgtgtctcagccaaactaaattt 50023669  T
Q  583 gtcaacaacaatactc 598  Q
    |||| || ||||||||    
T  50023670 gtcatcagcaatactc 50023685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 483 - 598
Target Start/End: Original strand, 50030688 - 50030803
Alignment:
Q  483 tcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgt 582  Q
    ||||||| | |||| |||||||| ||||   ||| || |||||||||||||||||||  ||||   ||| ||||| |||| ||||||||||||||||| |    
T  50030688 tcctcgataattaactgcagccgattttctaaaactttggcagttaactgccgaggggcatttagataaattacttgtgtgtctcagccaaactaaattt 50030787  T
Q  583 gtcaacaacaatactc 598  Q
    |||| || ||||||||    
T  50030788 gtcatcagcaatactc 50030803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 480 - 600
Target Start/End: Complemental strand, 40832696 - 40832579
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||  ||||||| |||||||||||| |    |||| |||||||||||||||||||  |||||| ||||||||||||||  |  |||||||| |||    
T  40832696 ttttcctcagcagttaactgcagccggtttcat---aatttggcagttaactgccgaggggcatttgaataatttactcgtgtggcatagccaaaccaaa 40832600  T
Q  580 tgtgtcaacaacaatactcaa 600  Q
    ||||  |||| |||| |||||    
T  40832599 tgtgggaacagcaattctcaa 40832579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 50447061 - 50446947
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||||||||||| ||||||||  |||   ||| ||||||||||||||||||| |   |||||||||||||||| || |  | ||| ||||| |||    
T  50447061 ttttcctcgacagttaactgcagccgtatttttaaaacttcggcagttaactgccgaagagcatttgagtaatttacttgtatgacacagtcaaaccaaa 50446962  T
Q  580 tgtgtcaacaacaat 594  Q
    ||||  |||||||||    
T  50446961 tgtgggaacaacaat 50446947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 518 - 583
Target Start/End: Complemental strand, 26932598 - 26932533
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtg 583  Q
    |||||||||| ||| |||| ||| |||||||||||||||||||||  | ||||||||||| |||||    
T  26932598 ttcggcagtttactaccgaaggacatttgagtaatttactcgtgtgacacagccaaactatatgtg 26932533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 534 - 594
Target Start/End: Original strand, 10753489 - 10753549
Alignment:
Q  534 cgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||| ||||| |||| |||| ||||||||||||||| ||| | ||||||||||||||||    
T  10753489 cgaggggtattttagtattttattcgtgtttctcagcctaacaagatgtgtcaacaacaat 10753549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 534 - 594
Target Start/End: Original strand, 10967258 - 10967318
Alignment:
Q  534 cgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||| ||||| |||| |||| ||||||||||||||| ||| | ||||||||||||||||    
T  10967258 cgaggggtattttagtattttattcgtgtttctcagcctaacaagatgtgtcaacaacaat 10967318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 552 - 592
Target Start/End: Original strand, 41933714 - 41933754
Alignment:
Q  552 tttactcgtgtttctcagccaaactaaatgtgtcaacaaca 592  Q
    |||||||||||||||||||||||| | ||||||||||||||    
T  41933714 tttactcgtgtttctcagccaaacaagatgtgtcaacaaca 41933754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 594
Target Start/End: Original strand, 50196968 - 50197044
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||| ||||||||||||||||  ||||  |||| ||| |||||| ||| |||||||  ||||||||||||||||||    
T  50196968 ttcggtagttaactgccgaggggcatttaggtaaattattcgtgtgtcttagccaaatcaaatgtgtcaacaacaat 50197044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 594
Target Start/End: Original strand, 72564 - 72639
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||| ||||  | |||||  ||| |||||||||||||||||||| ||  | ||||||||||||||||    
T  72564 tcggcagttaactaccgaatggtattttggtattttactcgtgtttctcagcctaaaaagatgtgtcaacaacaat 72639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 480 - 562
Target Start/End: Original strand, 3408260 - 3408343
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaatt-cggcagttaactgccgagggatatttgagtaatttactcgtgt 562  Q
    ||||||||| ||||||| ||| |||||||  || |||||| |||||||| |||| ||| ||  |||||||||||||||||||||    
T  3408260 ttttcctcggcagttaactgccgccggttgcacaaaaatttcggcagtttactgtcgaagggcatttgagtaatttactcgtgt 3408343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 594
Target Start/End: Original strand, 9655962 - 9656041
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtg-tttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||||||||||||||  ||||| |||| |||||| || ||| ||||||||  || ||||||||||| ||||    
T  9655962 aattcggcagttaactgccgaggggcatttgggtaaattactcatgttttttcagccaatgtatatgtgtcaacatcaat 9656041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 480 - 539
Target Start/End: Original strand, 16984181 - 16984240
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgaggg 539  Q
    ||||||||| ||||||| ||||||||| |||   ||| ||||||||||||||||||||||    
T  16984181 ttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaggg 16984240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 480 - 573
Target Start/End: Complemental strand, 35631216 - 35631126
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaa 573  Q
    ||||||||| ||||||| |||||||||||   | | |||||||||||||||||||||  |  ||||| |||| |||||| ||||||||| ||||    
T  35631216 ttttcctcggcagttaactgcagccggtt---ccataattcggcagttaactgccgataggcatttgggtaaattactcttgtttctcaaccaa 35631126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 483 - 598
Target Start/End: Complemental strand, 50020167 - 50020052
Alignment:
Q  483 tcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgt 582  Q
    ||||||| |||||| |||| ||| ||||   ||| |||||||||||||| || | ||  ||||   ||| |||||||||| |||||  ||||| ||||||    
T  50020167 tcctcgatagttaactgcaaccgattttctaaaacttcggcagttaactaccaaagggcatttagataaattactcgtgtgtctcattcaaaccaaatgt 50020068  T
Q  583 gtcaacaacaatactc 598  Q
    ||||||||||||||||    
T  50020067 gtcaacaacaatactc 50020052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 548 - 598
Target Start/End: Complemental strand, 2448962 - 2448912
Alignment:
Q  548 gtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactc 598  Q
    |||| |||||||||||| |||||||||| |||||||| |||| ||||||||    
T  2448962 gtaaattactcgtgtttatcagccaaaccaaatgtgtgaacagcaatactc 2448912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 516 - 594
Target Start/End: Complemental strand, 42528888 - 42528810
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||||||||||| ||  |||||  ||| ||||| |||||||||||||||   | || |||||||||||||    
T  42528888 aattcggcagttaactgccgatgggcatttggctaaattacttgtgtttctcagccaatgcatatttgtcaacaacaat 42528810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 480 - 536
Target Start/End: Original strand, 6178130 - 6178187
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaatt-cggcagttaactgccga 536  Q
    ||||||||| ||||||| ||||||||| |||  ||||||| |||||||||||||||||    
T  6178130 ttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccga 6178187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 480 - 536
Target Start/End: Original strand, 21018024 - 21018081
Alignment:
Q  480 ttttcctcgacagttaattgcagccgg-ttttacgaaaattcggcagttaactgccga 536  Q
    ||||||||| ||||||||||||||||| |||| | ||| ||| |||||||||||||||    
T  21018024 ttttcctcggcagttaattgcagccggatttttcaaaatttcagcagttaactgccga 21018081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 480 - 536
Target Start/End: Original strand, 41795376 - 41795433
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaatt-cggcagttaactgccga 536  Q
    ||||||||| ||||||| ||||||||| |||  ||||||| |||||||||||||||||    
T  41795376 ttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccga 41795433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 522 - 575
Target Start/End: Original strand, 42887701 - 42887754
Alignment:
Q  522 gcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaac 575  Q
    |||||||||| ||||| |||||||  ||||||||||| ||||||| ||||||||    
T  42887701 gcagttaactaccgagtgatatttaggtaatttactcatgtttctgagccaaac 42887754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 480 - 536
Target Start/End: Complemental strand, 49094137 - 49094080
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaatt-cggcagttaactgccga 536  Q
    ||||||||| ||||||| ||||||||| |||  ||||||| |||||||||||||||||    
T  49094137 ttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccga 49094080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 53536042 - 53535926
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||| |||||| |||||||||||   | | ||||||||||||||||||||| ||  |||| ||||| ||||| ||||  | |||||||   | |    
T  53536042 ttttcctcgatagttaactgcagccggtt---ccataattcggcagttaactgccgaagggcattttagtaaattactagtgtgacacagccaatgcata 53535946  T
Q  580 tgtgtcaacaacaatactca 599  Q
    |||||||||| |||| ||||    
T  53535945 tgtgtcaacagcaattctca 53535926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 601
Target Start/End: Original strand, 55407873 - 55407922
Alignment:
Q  552 tttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaaa 601  Q
    |||||||||||||||||||| ||| ||||||||||| | |||| ||||||    
T  55407873 tttactcgtgtttctcagcctaaccaaatgtgtcaatagcaattctcaaa 55407922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 480 - 536
Target Start/End: Complemental strand, 55793973 - 55793916
Alignment:
Q  480 ttttcctcgacagttaattgcagccgg-ttttacgaaaattcggcagttaactgccga 536  Q
    ||||||||| ||||||| ||||||||| |||| | ||| |||||||||||||||||||    
T  55793973 ttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccga 55793916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 2e-36; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 479 - 601
Target Start/End: Original strand, 18512671 - 18512792
Alignment:
Q  479 attttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaa 578  Q
    |||||||||| ||||||| ||||||||||||||| ||| ||||||||||||||||||| |   |||| ||||||||||||||||||||||||||||||||    
T  18512671 attttcctcggcagttaactgcagccggttttactaaacttcggcagttaactgccgaagagcattt-agtaatttactcgtgtttctcagccaaactaa 18512769  T
Q  579 atgtgtcaacaacaatactcaaa 601  Q
    ||||||||||| |||||||||||    
T  18512770 atgtgtcaacagcaatactcaaa 18512792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 478 - 594
Target Start/End: Original strand, 8539534 - 8539650
Alignment:
Q  478 cattttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaacta 577  Q
    ||||||||||| ||||||| ||||||||| |||   ||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||     
T  8539534 cattttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttacttgtgtttctcagccaaactc 8539633  T
Q  578 aatgtgtcaacaacaat 594  Q
    |||||||||||| ||||    
T  8539634 aatgtgtcaacagcaat 8539650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 478 - 594
Target Start/End: Original strand, 11348493 - 11348609
Alignment:
Q  478 cattttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaacta 577  Q
    ||||||||||| ||||||| |||| |||| |||   ||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||     
T  11348493 cattttcctcggcagttaactgcatccggatttctaaaacttcggcagttaactgccgaggaacatttgagtaatttactcgtgtttctcagccaaactc 11348592  T
Q  578 aatgtgtcaacaacaat 594  Q
    |||||||||||| ||||    
T  11348593 aatgtgtcaacagcaat 11348609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 480 - 600
Target Start/End: Complemental strand, 30192545 - 30192425
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||||||||||| ||||||||||| |   ||| ||||||||||||||||||| ||  |||||||||||||||||||||||||||| ||||  |||    
T  30192545 ttttcctcgacagttaactgcagccggttctttaaaatttcggcagttaactgccgaagggcatttgagtaatttactcgtgtttctcagtcaaatcaaa 30192446  T
Q  580 tgtgtcaacaacaatactcaa 600  Q
    |||||||||| ||||||||||    
T  30192445 tgtgtcaacagcaatactcaa 30192425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 518 - 598
Target Start/End: Complemental strand, 41622188 - 41622108
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactc 598  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41622188 ttcggcagttaactgccgatggacatttgagtaatttactcgtgtttctcagtcaaactaaatgtgtcaacaacaatactc 41622108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 485 - 598
Target Start/End: Complemental strand, 18512279 - 18512166
Alignment:
Q  485 ctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgt 584  Q
    |||| ||||||| ||||||||||||||| ||| ||||||||||||||||||| |   |||||| |||||||||||||||||| |||||||||||||||||    
T  18512279 ctcggcagttaactgcagccggttttactaaacttcggcagttaactgccgatgagcatttgaataatttactcgtgtttctaagccaaactaaatgtgt 18512180  T
Q  585 caacaacaatactc 598  Q
    ||| | ||||||||    
T  18512179 caatagcaatactc 18512166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 13838444 - 13838558
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||  |||||| ||||||||||||    | |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| | |    
T  13838444 ttttcctcggtagttaactgcagccggtttcttcagaattcggcagttaactgccgaggggtatttgggtaatttactcgtgtttctcagccaaacaaca 13838543  T
Q  580 tgtgtcaacaacaat 594  Q
    |||||||||| ||||    
T  13838544 tgtgtcaacagcaat 13838558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 514 - 590
Target Start/End: Complemental strand, 35564280 - 35564204
Alignment:
Q  514 aaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaa 590  Q
    ||||||||||||||||||||||| | |||||||||||| |||||||||||||||| |||||| ||||||||||||||    
T  35564280 aaaattcggcagttaactgccgaagaatatttgagtaaattactcgtgtttctcaaccaaaccaaatgtgtcaacaa 35564204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 480 - 598
Target Start/End: Complemental strand, 35671135 - 35671017
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||||| |   ||| |||| ||||||| |||||||| | |||| ||||||||||||||||||||||  ||||  |||    
T  35671135 ttttcctcggcagttaactgcagccggttctttaaaatttcgacagttaattgccgaggaacatttaagtaatttactcgtgtttctcaatcaaatcaaa 35671036  T
Q  580 tgtgtcaacaacaatactc 598  Q
    |||||||||||||||||||    
T  35671035 tgtgtcaacaacaatactc 35671017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 518 - 598
Target Start/End: Original strand, 35672063 - 35672143
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactc 598  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||  |||| ||| |||| ||||||||    
T  35672063 ttcggcagttaactgccgagggacatttgagtaatttactcatgtttctcagccaaatcaaatatgtgaacagcaatactc 35672143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 542 - 599
Target Start/End: Complemental strand, 35651406 - 35651349
Alignment:
Q  542 atttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  35651406 atttgaataatttactcgtgtttctcagccaaaccaaatgtgtcaacaacaatactca 35651349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 480 - 562
Target Start/End: Original strand, 3892460 - 3892539
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgt 562  Q
    ||||||||| ||||||| |||||||||||| |    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  3892460 ttttcctcggcagttaactgcagccggtttcat---aattcggcagttaactgccgagggacatttgagtaatttactcgtgt 3892539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 483 - 595
Target Start/End: Original strand, 41623071 - 41623183
Alignment:
Q  483 tcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgt 582  Q
    |||||| ||||| | ||||||||||| |   ||| ||||||||||||||||||| || |||||| |||| |||| ||||||||||||| |||| ||||||    
T  41623071 tcctcggcagtttactgcagccggttctttaaaatttcggcagttaactgccgaagggtatttgggtaaattacccgtgtttctcagctaaaccaaatgt 41623170  T
Q  583 gtcaacaacaata 595  Q
    || ||||||||||    
T  41623171 gtgaacaacaata 41623183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 480 - 579
Target Start/End: Complemental strand, 3891536 - 3891437
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||  |||   ||| |||||||||||||||||||||| ||||||||||||||||||||||  | |||||||| ||||    
T  3891536 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccaaagtaaa 3891437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 35282420 - 35282538
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||||||| || |   ||| ||| |||||||||||   ||||  ||||||||||||||||  ||||||||||||||||||||    
T  35282420 ttttcctcggcagttaactgcagccgattcttttaaatttcagcagttaactgagaagggc-atttgagtaatttactaatgtttctcagccaaactaaa 35282518  T
Q  580 tgtgtcaacaacaatactca 599  Q
    ||||| ||||||||||||||    
T  35282519 tgtgtaaacaacaatactca 35282538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 2169740 - 2169627
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||||||||||| ||||||| |||    ||||||||||| ||||||||  | | |||||||||||| ||| | ||||||||||||||||| |||    
T  2169740 ttttcctcgacagttaat-gcagccgatttcttcaaaattcggcaattaactgcaaaagaatatttgagtaaattaatagtgtttctcagccaaacaaaa 2169642  T
Q  580 tgtgtcaacaacaat 594  Q
    | |||||||||||||    
T  2169641 tatgtcaacaacaat 2169627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 516 - 594
Target Start/End: Complemental strand, 8679580 - 8679502
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||||||||||||||| |||| ||||| ||||||||||||||| |||||   | ||||||||||||||||    
T  8679580 aattcggcagttaactgccgagggacatttcagtaaattactcgtgtttctcggccaatgcatatgtgtcaacaacaat 8679502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 479 - 600
Target Start/End: Original strand, 40789226 - 40789347
Alignment:
Q  479 attttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaa 578  Q
    |||||||||| ||||||| |||||||| || |   ||| ||| | | ||||||||| | ||| |||||| |||||||||| |||||||||  ||||| ||    
T  40789226 attttcctcggcagttaactgcagccgattctttaaaatttcagtaattaactgccaatggacatttgaataatttactcatgtttctcaatcaaaccaa 40789325  T
Q  579 atgtgtcaacaacaatactcaa 600  Q
    ||||||||||||||||||||||    
T  40789326 atgtgtcaacaacaatactcaa 40789347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 520 - 594
Target Start/End: Complemental strand, 204520 - 204445
Alignment:
Q  520 cggcagttaactgccga-gggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||||||| |||  |||||||||| ||||| |||||||||||||||||||||||||||  |||||||    
T  204520 cggcagttaactgccgaaggggcatttgagtaaattactggtgtttctcagccaaactaaatgtgtcttcaacaat 204445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 518 - 599
Target Start/End: Complemental strand, 5791 - 5710
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    ||||||||||||||||||||||   ||||||||||||||||||||  | |||| |||| |||||||  ||||||||||||||    
T  5791 ttcggcagttaactgccgaggggcgtttgagtaatttactcgtgtggcacagctaaaccaaatgtgggaacaacaatactca 5710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 518 - 575
Target Start/End: Complemental strand, 13563682 - 13563625
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaac 575  Q
    |||||||||||||||||||||| |||||| |||||||||  |||||||||||||||||    
T  13563682 ttcggcagttaactgccgaggggtatttgggtaatttacatgtgtttctcagccaaac 13563625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 490 - 571
Target Start/End: Original strand, 18155472 - 18155552
Alignment:
Q  490 cagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagcc 571  Q
    ||||||| ||||||||||||    | ||||||| |||||||||||||||||||||||  |||||||||||||||||||||||    
T  18155472 cagttaactgcagccggtttcttcagaattcggtagttaactgccgagggatatttg-ctaatttactcgtgtttctcagcc 18155552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 522 - 594
Target Start/End: Original strand, 34080134 - 34080206
Alignment:
Q  522 gcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||||||||||| |||||| |||||||||| |||||| |||||||| | | ||||||||||| ||||    
T  34080134 gcagttaactgccgaggggtatttgggtaatttacttgtgtttatcagccaaccaacatgtgtcaacagcaat 34080206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 518 - 594
Target Start/End: Original strand, 38408525 - 38408601
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||||| |||||| ||  ||||  |||| |||||||||| |||||||||||| ||||||||||||||||||    
T  38408525 ttcggcagttaattgccgaagggcatttaggtaaattactcgtgtgtctcagccaaaccaaatgtgtcaacaacaat 38408601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 481 - 562
Target Start/End: Original strand, 14684 - 14765
Alignment:
Q  481 tttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgt 562  Q
    |||||||| ||||||| | ||||||  |||   ||| ||||||||||||||||||| ||| |||||||||||||||||||||    
T  14684 tttcctcggcagttaactacagccgtatttctaaaacttcggcagttaactgccgaaggacatttgagtaatttactcgtgt 14765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 519 - 600
Target Start/End: Complemental strand, 5197058 - 5196977
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaa 600  Q
    |||||||||||||||||||||  ||||   ||| |||||||||| ||||||| ||||  ||||||||||||||||| |||||    
T  5197058 tcggcagttaactgccgaggggcatttagataaattactcgtgtgtctcagcgaaacctaatgtgtcaacaacaattctcaa 5196977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 490 - 594
Target Start/End: Original strand, 38971653 - 38971757
Alignment:
Q  490 cagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaaca 589  Q
    ||||||| ||||||||||||    ||||||||| ||||||||||||| ||  ||||  |||| ||| |||||| ||||| || ||| |||||||||||||    
T  38971653 cagttaactgcagccggtttccacaaaattcgggagttaactgccgaagggcatttaggtaaattagtcgtgtgtctcaacctaaccaaatgtgtcaaca 38971752  T
Q  590 acaat 594  Q
    |||||    
T  38971753 acaat 38971757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 480 - 600
Target Start/End: Complemental strand, 42912209 - 42912092
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| | |||||||||| |    |||||||||||||||||||||||   ||||| |||| ||||| ||  ||||||||||||   ||    
T  42912209 ttttcctcggcagttaactacagccggtttcat---aattcggcagttaactgccgaggagcatttgggtaaattactagtaattctcagccaaaggtaa 42912113  T
Q  580 tgtgtcaacaacaatactcaa 600  Q
    |||||||||| |||| |||||    
T  42912112 tgtgtcaacagcaattctcaa 42912092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 478 - 594
Target Start/End: Complemental strand, 8574737 - 8574621
Alignment:
Q  478 cattttcctcgacagttaattgcagccggttttacgaaaa-ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaact 576  Q
    ||||||||||||||||||| ||| ||| ||||    |||| |||||||||| ||| |||| ||  |||||||||||||||||||| | | |||||||||     
T  8574737 cattttcctcgacagttaactgccgccagtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtg-tgcacagccaaacc 8574639  T
Q  577 aaatgtgtcaacaacaat 594  Q
    |||||||  |||||||||    
T  8574638 aaatgtgggaacaacaat 8574621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 554 - 598
Target Start/End: Complemental strand, 8698877 - 8698833
Alignment:
Q  554 tactcgtgtttctcagccaaactaaatgtgtcaacaacaatactc 598  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||    
T  8698877 tactcgtgtttctcagcctaacaagatgtgtcaacaacaatactc 8698833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 522 - 601
Target Start/End: Complemental strand, 35281850 - 35281771
Alignment:
Q  522 gcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaaa 601  Q
    |||||||||||||||| |  ||||| |||| ||| | ||||||||||||||||   |||||||||||| |||| ||||||    
T  35281850 gcagttaactgccgagaggcatttgggtaaattattagtgtttctcagccaaaggtaatgtgtcaacagcaattctcaaa 35281771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 479 - 557
Target Start/End: Original strand, 2170574 - 2170652
Alignment:
Q  479 attttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttact 557  Q
    |||||||||| ||||||| ||||||||||| |   ||| ||||  ||||||||| ||| |||||||||| |||||||||    
T  2170574 attttcctcggcagttaactgcagccggttctttaaaatttcgatagttaactgtcgaaggatatttgaataatttact 2170652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 516 - 594
Target Start/End: Original strand, 40788782 - 40788860
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||||||||||||||||   |||||  ||| |||||||||||| ||||||||   | |||||| |||||||||    
T  40788782 aattcggcagttaactgccgaggagcatttggataaattactcgtgtttttcagccaatacatatgtgtgaacaacaat 40788860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 480 - 536
Target Start/End: Original strand, 19037490 - 19037547
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaatt-cggcagttaactgccga 536  Q
    ||||||||| ||||||| ||||||||| |||  ||||||| |||||||||||||||||    
T  19037490 ttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccga 19037547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 583
Target Start/End: Complemental strand, 27659954 - 27659889
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtg 583  Q
    |||||||||| ||| |||| ||  |||||||||||||||||||||  | ||||||||| |||||||    
T  27659954 ttcggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagccaaaccaaatgtg 27659889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 518 - 583
Target Start/End: Original strand, 30711218 - 30711283
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtg 583  Q
    |||||||||||||||||||||   ||||| |||||||||| ||||  |  ||||||||||||||||    
T  30711218 ttcggcagttaactgccgaggagcatttgcgtaatttacttgtgtggcatagccaaactaaatgtg 30711283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 2e-32; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 482 - 597
Target Start/End: Complemental strand, 14002570 - 14002455
Alignment:
Q  482 ttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatg 581  Q
    ||||||| ||||||| ||||||||||| |   ||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  14002570 ttcctcggcagttaactgcagccggttctttaaaatttcagcagttaactgccgagggacatttgagtaatttactcgtgtttctcagccaaaccaaatg 14002471  T
Q  582 tgtcaacaacaatact 597  Q
    |||||||| |||||||    
T  14002470 tgtcaacagcaatact 14002455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 516 - 599
Target Start/End: Complemental strand, 4286111 - 4286028
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||    
T  4286111 aattcggcagttaactgccgatgggtatttgagtaatttactcgtgtttctcagccaaacaacatgtgtcaacaacaattctca 4286028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 480 - 582
Target Start/End: Complemental strand, 40156452 - 40156350
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||||||| | ||| ||||||| ||||||| ||||||  |||||||||||||||||||||||||||||||||| |||    
T  40156452 ttttcctcgtcagttaactgcagccggtttttcaaaatttcggcaattaactgtcgaggggcatttgagtaatttactcgtgtttctcagccaaaccaaa 40156353  T
Q  580 tgt 582  Q
    |||    
T  40156352 tgt 40156350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 482 - 598
Target Start/End: Original strand, 37322133 - 37322248
Alignment:
Q  482 ttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatg 581  Q
    ||||||| ||||||| ||||||||||| | | ||| ||||||||||||||||||||||  |||||||||||||| |||||||| |||||||||  |||||    
T  37322133 ttcctcggcagttaactgcagccggttcttcaaaatttcggcagttaactgccgagggc-atttgagtaatttattcgtgtttttcagccaaatcaaatg 37322231  T
Q  582 tgtcaacaacaatactc 598  Q
     ||||||||||||||||    
T  37322232 cgtcaacaacaatactc 37322248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 491 - 602
Target Start/End: Complemental strand, 40220681 - 40220570
Alignment:
Q  491 agttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaa 590  Q
    |||||| |||||||| ||||   | |||||||||||||||||||||||  |||||| |||||||||| ||||||||||||||||| | ||||||||||||    
T  40220681 agttaactgcagccgattttttcagaattcggcagttaactgccgaggagtatttgggtaatttactagtgtttctcagccaaacaacatgtgtcaacaa 40220582  T
Q  591 caatactcaaaa 602  Q
    |||| |||||||    
T  40220581 caattctcaaaa 40220570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 480 - 598
Target Start/End: Original strand, 29407907 - 29408025
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||  |||||| ||||||||||| |   ||| |||| |||||||||||||||||| ||||||||||||||||| | ||||||| | |||| |||    
T  29407907 ttttcctcgttagttaactgcagccggttctttaaaatttcgacagttaactgccgagggacatttgagtaatttactcatatttctcaactaaaccaaa 29408006  T
Q  580 tgtgtcaacaacaatactc 598  Q
    |||||||||||||||||||    
T  29408007 tgtgtcaacaacaatactc 29408025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 480 - 584
Target Start/End: Complemental strand, 29407025 - 29406921
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||||||||||||||| |   ||| ||||||||||||||||||| || ||| || |||| ||||||||||||||||||||||| |||    
T  29407025 ttttcctcggcagttaattgcagccggttctttaaaatttcggcagttaactgccgaagggtatctgggtaaattactcgtgtttctcagccaaaccaaa 29406926  T
Q  580 tgtgt 584  Q
    |||||    
T  29406925 tgtgt 29406921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 514 - 594
Target Start/End: Complemental strand, 37294360 - 37294280
Alignment:
Q  514 aaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||| ||||||||||||||| ||||||||| |||| |||||||||||| |||||||||||||| ||||||||||||||    
T  37294360 aaaattcagcagttaactgccgaaggatatttgggtaaattactcgtgtttatcagccaaactaaacgtgtcaacaacaat 37294280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 2271757 - 2271872
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaact-aa 578  Q
    ||||||||||||||||| |||||| | || |   ||| ||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||| ||    
T  2271757 ttttcctcgacagttaactgcagctgattctttaaaatttcggcagttaacggccgaggggtatttgagtaatttactcgtgttcctcagccaaactcaa 2271856  T
Q  579 atgtgtcaacaacaat 594  Q
    |||||| |||| ||||    
T  2271857 atgtgtgaacatcaat 2271872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 491 - 594
Target Start/End: Original strand, 26544020 - 26544123
Alignment:
Q  491 agttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaa 590  Q
    |||||| ||||||||||||    | |||||||||||||||||||||| | ||||||  ||||||||||||||||||||||||||| | ||||||||||||    
T  26544020 agttaactgcagccggtttcttcagaattcggcagttaactgccgagaggtatttggataatttactcgtgtttctcagccaaacaacatgtgtcaacaa 26544119  T
Q  591 caat 594  Q
    ||||    
T  26544120 caat 26544123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 480 - 587
Target Start/End: Complemental strand, 33222669 - 33222562
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||||| |   ||| ||||| |||||||||||||||   |||||||||||||||||||||||||||||||||| |||    
T  33222669 ttttcctcggcagttaactgcagccggttctttaaaatttcggtagttaactgccgaggagcatttgagtaatttactcgtgtttctcagccaaaccaaa 33222570  T
Q  580 tgtgtcaa 587  Q
    ||| ||||    
T  33222569 tgtatcaa 33222562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 516 - 594
Target Start/End: Original strand, 4286757 - 4286835
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||  | ||||||||||||||||    
T  4286757 aattcggcagttaactgtcgaggggtatttgagtaatttactagtgtttctcagccaaagaacatgtgtcaacaacaat 4286835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 30803038 - 30803152
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||  |||   ||| ||||||||||||||||||||||| |||||||||||||||||||||  | ||||||||| |||    
T  30803038 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgagggacatttgagtaatttactcgtgtggcacagccaaaccaaa 30803137  T
Q  580 tgtgtcaacaacaat 594  Q
    ||||  |||||||||    
T  30803138 tgtgggaacaacaat 30803152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 516 - 594
Target Start/End: Original strand, 40221186 - 40221264
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||  | ||||||||||| ||||    
T  40221186 aattcggcagttaactgccgagggatatttaagtaatttactcgtgtatctcagccaaagaacatgtgtcaacagcaat 40221264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 480 - 600
Target Start/End: Original strand, 12252502 - 12252622
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||  |||||| ||||||||||| |   ||| |||| |||||||||||||| ||| |||||||||||||| | |||||||||| |||||  |||    
T  12252502 ttttcctcggaagttaactgcagccggttctttaaaatttcgacagttaactgccgaaggacatttgagtaatttatttgtgtttctcaaccaaatcaaa 12252601  T
Q  580 tgtgtcaacaacaatactcaa 600  Q
    ||| |||||||||||||||||    
T  12252602 tgtatcaacaacaatactcaa 12252622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 480 - 598
Target Start/End: Original strand, 28139576 - 28139695
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaatt-cggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaa 578  Q
    ||||||||| ||||||| |||||||| ||||   |||||| ||| ||||||||| ||| || ||||||| ||| ||||||||||||||||||||||  ||    
T  28139576 ttttcctcggcagttaaatgcagccgatttttttaaaatttcggtagttaactgtcgaagggtatttgaataaattactcgtgtttctcagccaaatcaa 28139675  T
Q  579 atgtgtcaacaacaatactc 598  Q
    |||||| |||||||||||||    
T  28139676 atgtgtgaacaacaatactc 28139695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 480 - 600
Target Start/End: Complemental strand, 30802093 - 30801976
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||||||||||| |    ||||||||||||||||||||||||  ||||| |||| ||||| ||||||||||||||||   ||    
T  30802093 ttttcctcggcagttaactgcagccggtttcat---aattcggcagttaactgccgaggggcatttgggtaaattactagtgtttctcagccaaaggtaa 30801997  T
Q  580 tgtgtcaacaacaatactcaa 600  Q
    |||||||||| |||| |||||    
T  30801996 tgtgtcaacagcaattctcaa 30801976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 36510876 - 36510990
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||  |||   ||| |||||||||||||||||||||| ||||||||||||||||||||||  | ||||||||| |||    
T  36510876 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttactcgtgtgacacagccaaaccaaa 36510975  T
Q  580 tgtgtcaacaacaat 594  Q
     |||  |||||||||    
T  36510976 agtgggaacaacaat 36510990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 483 - 587
Target Start/End: Complemental strand, 36652956 - 36652852
Alignment:
Q  483 tcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgt 582  Q
    ||||||| |||||| |||| ||||||||   ||| |||| |||||||||||||| ||| |||| ||||| |||||||||| |||||||||||| ||||||    
T  36652956 tcctcgatagttaactgcatccggttttctaaaacttcgacagttaactgccgatggacatttaagtaaattactcgtgtgtctcagccaaaccaaatgt 36652857  T
Q  583 gtcaa 587  Q
    |||||    
T  36652856 gtcaa 36652852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 480 - 592
Target Start/End: Original strand, 38779663 - 38779772
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||  |||||| |||||||||||   | | ||||||||||||||||||||||||||||||  ||  || ||  ||||||||||||||||| |||    
T  38779663 ttttcctcgggagttaactgcagccggtt---ccataattcggcagttaactgccgagggatattttcgtctttcacatgtgtttctcagccaaaccaaa 38779759  T
Q  580 tgtgtcaacaaca 592  Q
    |||||||||||||    
T  38779760 tgtgtcaacaaca 38779772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 516 - 594
Target Start/End: Original strand, 43313415 - 43313493
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||| |||||| |||| | ||||||||||||||||||||||||||||||||||| | ||||| ||||| ||||    
T  43313415 aattcggcagctaactgtcgagaggtatttgagtaatttactcgtgtttctcagccaaacaacatgtgccaacagcaat 43313493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 518 - 594
Target Start/End: Complemental strand, 3086051 - 3085975
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||||||||||| | |||||||||||||||||||||  | || ||||||||||||||  |||||||||    
T  3086051 ttcggcagttaactgccgaggaacatttgagtaatttactcgtgtggcacaaccaaactaaatgtgggaacaacaat 3085975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 516 - 599
Target Start/End: Original strand, 29948818 - 29948901
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    ||||||||||||||||| ||||||  ||||| |||| ||||| ||||||||||||||||   ||||||||||||||||| ||||    
T  29948818 aattcggcagttaactgtcgaggggcatttgggtaaattactagtgtttctcagccaaagataatgtgtcaacaacaattctca 29948901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 480 - 575
Target Start/End: Complemental strand, 39489236 - 39489141
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaac 575  Q
    ||||||||||||||||| ||||| ||  |||   ||| ||||||||||||||||||| || ||||||||||||||||||||||  | |||||||||    
T  39489236 ttttcctcgacagttaactgcagtcgtatttgtaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagccaaac 39489141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 482 - 600
Target Start/End: Complemental strand, 6232716 - 6232598
Alignment:
Q  482 ttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatg 581  Q
    ||||||| ||||||| ||||||||||| |   ||| ||| ||||||||||| ||||  | ||||||||||||||| | | |||||| ||||||| ||||     
T  6232716 ttcctcggcagttaactgcagccggttctttaaaatttcagcagttaactgtcgagaaacatttgagtaatttacccatatttctctgccaaaccaaata 6232617  T
Q  582 tgtcaacaacaatactcaa 600  Q
    |||| ||||||||||||||    
T  6232616 tgtcgacaacaatactcaa 6232598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 484 - 598
Target Start/End: Complemental strand, 16544420 - 16544306
Alignment:
Q  484 cctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtg 583  Q
    |||||| |||||| |||| |||||| |   ||| ||||||| ||||||| ||| ||||||||   ||| ||||||||||||||| ||||||| |||||||    
T  16544420 cctcgagagttaagtgcaaccggttctttaaaatttcggcaattaactgtcgaaggatatttagataaattactcgtgtttctcggccaaaccaaatgtg 16544321  T
Q  584 tcaacaacaatactc 598  Q
    | |||||||||||||    
T  16544320 tgaacaacaatactc 16544306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 519 - 575
Target Start/End: Original strand, 3803602 - 3803659
Alignment:
Q  519 tcggcagttaactgccga-gggatatttgagtaatttactcgtgtttctcagccaaac 575  Q
    |||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||    
T  3803602 tcggcagttaactgccgatgggatatttgggtaatttacttgtgtttctcagccaaac 3803659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 516 - 593
Target Start/End: Complemental strand, 7779661 - 7779584
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaa 593  Q
    ||||||||||||||||||||| ||||||||   |  |||||  ||||||||||||||||| |||||||||||||||||    
T  7779661 aattcggcagttaactgccgaaggatattttcatcttttacatgtgtttctcagccaaaccaaatgtgtcaacaacaa 7779584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 518 - 599
Target Start/End: Complemental strand, 33416144 - 33416063
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    ||||| ||||||||||||| || ||||||||||| |||||||||||| |||||||||| ||| |||| |||| |||| ||||    
T  33416144 ttcggtagttaactgccgaagggtatttgagtaaattactcgtgtttttcagccaaaccaaacgtgtaaacagcaattctca 33416063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 28420237 - 28420348
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||||||||||| |    ||||||||||||||||| | ||||  ||||| |||| ||||| ||||||||||||||||   ||    
T  28420237 ttttcctcggcagttaactgcagccggtttcat---aattcggcagttaactgtcaaggggcatttgggtaaattactagtgtttctcagccaaaggtaa 28420333  T
Q  580 tgtgtcaacaacaat 594  Q
    |||||||||| ||||    
T  28420334 tgtgtcaacatcaat 28420348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 518 - 594
Target Start/End: Original strand, 29074061 - 29074137
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||||||||||||  |||||||||||||||||||||  | || |||||| |||||||  |||||||||    
T  29074061 ttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacaaccaaaccaaatgtgggaacaacaat 29074137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 39489986 - 39490097
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||||||||||| |    ||||| ||||||||||||||||||| |||||| |||||||| |||||  |  |||||||| |||    
T  39489986 ttttcctcggcagttaactgcagccggtttcat---aattcagcagttaactgccgagggacatttgaataatttacccgtgtggcatagccaaaccaaa 39490082  T
Q  580 tgtgtcaacaacaat 594  Q
    ||||  |||||||||    
T  39490083 tgtgggaacaacaat 39490097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 480 - 583
Target Start/End: Complemental strand, 10424892 - 10424789
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| || |||||  |||   ||| |||||||||||||||| |||||  |||||||||||||||||||||  | ||||||||| |||    
T  10424892 ttttcctcggcagttaactgtagccgtatttctaaaacttcggcagttaactgctgaggggcatttgagtaatttactcgtgtggcacagccaaaccaaa 10424793  T
Q  580 tgtg 583  Q
    ||||    
T  10424792 tgtg 10424789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 480 - 598
Target Start/End: Complemental strand, 14456555 - 14456436
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgaggga-tatttgagtaatttactcgtgtttctcagccaaactaa 578  Q
    ||||||||| ||||||| ||||||||||||||       ||||||||||||||| |||||  |||||  ||| |||||| |||||||||||||||||  |    
T  14456555 ttttcctcggcagttaactgcagccggttttatttttgctcggcagttaactgcagagggggtattttggtattttactggtgtttctcagccaaacata 14456456  T
Q  579 atgtgtcaacaacaatactc 598  Q
    ||||||||||| ||||||||    
T  14456455 atgtgtcaacagcaatactc 14456436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 523 - 598
Target Start/End: Original strand, 16544679 - 16544754
Alignment:
Q  523 cagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactc 598  Q
    ||||||| || ||||||| |||||||||||||||| |||||| |||  ||||| |||| |||||||||||||||||    
T  16544679 cagttaattgtcgagggacatttgagtaatttacttgtgtttttcaatcaaaccaaatatgtcaacaacaatactc 16544754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 491 - 598
Target Start/End: Original strand, 29401636 - 29401743
Alignment:
Q  491 agttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaa 590  Q
    |||||| ||| |||||||||   ||| |||| |||||||||||||||||  |||| ||||| |||||||||| |||| |||||    |||||||||||||    
T  29401636 agttaactgccgccggttttctaaaacttcgacagttaactgccgaggggcatttaagtaaattactcgtgtgtctcggccaatggcaatgtgtcaacaa 29401735  T
Q  591 caatactc 598  Q
    ||||||||    
T  29401736 caatactc 29401743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 523 - 578
Target Start/End: Complemental strand, 31567951 - 31567896
Alignment:
Q  523 cagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaa 578  Q
    |||||||||||||||||||||||  ||| ||||| |||||||||||||||||||||    
T  31567951 cagttaactgccgagggatattttggtattttacacgtgtttctcagccaaactaa 31567896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 481 - 600
Target Start/End: Original strand, 43619163 - 43619283
Alignment:
Q  481 tttcctcgacagttaattgcagccggttttacgaaaa--ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaa 578  Q
    |||||||| ||||||| ||| |||||||| || ||||  ||||||||||||||||||| ||  |||||| ||||||||||||||  | ||||||||| ||    
T  43619163 tttcctcggcagttaactgccgccggttt-actaaaaacttcggcagttaactgccgaagggcatttgattaatttactcgtgtggcacagccaaaccaa 43619261  T
Q  579 atgtgtcaacaacaatactcaa 600  Q
    |||||  |||| |||| |||||    
T  43619262 atgtgggaacagcaattctcaa 43619283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 12252172 - 12252061
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||  |||||| |||||||||||   | | |||||||||||||||||||||||   ||||  |||| ||||| |||||||||||||||    ||    
T  12252172 ttttcctcggtagttaactgcagccggtt---ccataattcggcagttaactgccgaggagcatttaggtaaattactagtgtttctcagccaatgacaa 12252076  T
Q  580 tgtgtcaacaacaat 594  Q
    |||||||||||||||    
T  12252075 tgtgtcaacaacaat 12252061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 522 - 598
Target Start/End: Complemental strand, 24541747 - 24541671
Alignment:
Q  522 gcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactc 598  Q
    ||||||||||||||| ||| |||| |||| |||||  |||||| |||||||||| | | ||||||||||||||||||    
T  24541747 gcagttaactgccgaaggacattttagtattttacatgtgtttttcagccaaacaacacgtgtcaacaacaatactc 24541671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 562
Target Start/End: Complemental strand, 29947782 - 29947738
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgt 562  Q
    ||||||||||||||||||||||  |||||||||||||||||||||    
T  29947782 ttcggcagttaactgccgaggggcatttgagtaatttactcgtgt 29947738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 519 - 594
Target Start/End: Original strand, 40539153 - 40539229
Alignment:
Q  519 tcggcagttaactgccgaggg-atatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||||||  |||||| ||||||  ||| |||||||||||||||||||| ||| | ||||||||||||||||    
T  40539153 tcggcagttaactatcgaggggatattttggtattttactcgtgtttctcagcctaacaagatgtgtcaacaacaat 40539229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 516 - 599
Target Start/End: Original strand, 3086119 - 3086202
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    |||||||||||||||| |||| ||  ||||| |||| ||||| ||||||||||||||||   |||||||||||| |||| ||||    
T  3086119 aattcggcagttaactaccgaagggcatttgggtaaattactagtgtttctcagccaaaggtaatgtgtcaacagcaattctca 3086202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 491 - 594
Target Start/End: Complemental strand, 6637576 - 6637473
Alignment:
Q  491 agttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaa 590  Q
    |||||| ||||||||||||    ||| |||||||||||||| ||||||||  |||  |||| |||||||||| |||||| | ||| ||||||||||| ||    
T  6637576 agttaactgcagccggtttccacaaacttcggcagttaactaccgagggacgtttaggtaaattactcgtgtgtctcagtctaaccaaatgtgtcaagaa 6637477  T
Q  591 caat 594  Q
    ||||    
T  6637476 caat 6637473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 519 - 598
Target Start/End: Complemental strand, 17911187 - 17911108
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactc 598  Q
    |||||||||||||| ||| ||| |||| |||| |||||  |||||| |||||||||| | ||||||||||| ||||||||    
T  17911187 tcggcagttaactgtcgaaggacattttagtattttacatgtgtttttcagccaaacaacatgtgtcaacatcaatactc 17911108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 480 - 563
Target Start/End: Complemental strand, 28138633 - 28138550
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtt 563  Q
    ||||||||| |||||||||||| |||||| |   ||| |||||||||||||| | |||||  |||||| |||||||||||||||    
T  28138633 ttttcctcggcagttaattgcaaccggttctttaaaatttcggcagttaactactgaggggcatttgaataatttactcgtgtt 28138550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 519 - 594
Target Start/End: Complemental strand, 36509982 - 36509907
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||| |||| |||||||||||| |||||||||||||||||||||  |  |||||||| |||||||  |||||||||    
T  36509982 tcggtagtttactgccgagggacatttgagtaatttactcgtgtgacatagccaaaccaaatgtgggaacaacaat 36509907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 28477087 - 28477201
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||  |||   ||| ||||||||||||||| ||||||  ||| ||||||||| |||||||  | || |||||||| |    
T  28477087 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgtcgaggggcattagagtaatttgctcgtgtggcacaaccaaactata 28477186  T
Q  580 tgtgtcaacaacaat 594  Q
    ||||  |||||||||    
T  28477187 tgtgggaacaacaat 28477201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 516 - 594
Target Start/End: Complemental strand, 29905478 - 29905400
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||| || ||||||||||||| | |||||  ||| |||||||||||||||||||||   | ||||||||||||||||    
T  29905478 aattcgacaattaactgccgaggaagatttggataaattactcgtgtttctcagccaatgcatatgtgtcaacaacaat 29905400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 2983418 - 2983361
Alignment:
Q  515 aaattcggcagttaactgccgagggat-atttgagtaatttactcgtgtttctcagcc 571  Q
    ||||||||||| ||||||||||||||  |||||||||||||||  |||||||||||||    
T  2983418 aaattcggcagctaactgccgagggagcatttgagtaatttacatgtgtttctcagcc 2983361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 523 - 575
Target Start/End: Complemental strand, 3795347 - 3795294
Alignment:
Q  523 cagttaactgccgaggg-atatttgagtaatttactcgtgtttctcagccaaac 575  Q
    ||||||||||||||||| |||||  ||||||||||| |||||||||||||||||    
T  3795347 cagttaactgccgaggggatattcaagtaatttacttgtgtttctcagccaaac 3795294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 518 - 599
Target Start/End: Complemental strand, 20937912 - 20937831
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    ||||||||||||||||||| ||  ||||  |||||||||||||||  | ||||||||| |||||||  ||||||||| ||||    
T  20937912 ttcggcagttaactgccgaagggcatttaggtaatttactcgtgtggcacagccaaaccaaatgtgggaacaacaattctca 20937831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 23462629 - 23462685
Alignment:
Q  52 actgattttaaatttgaattttgcagtttgacatgaaattggtctctcaatccctttc 109  Q
    |||| |||| ||||||||||||||  |||||||||||||||||||| |||||||||||    
T  23462629 actggttttcaatttgaattttgctatttgacatgaaattggtctc-caatccctttc 23462685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 518 - 599
Target Start/End: Complemental strand, 39033113 - 39033032
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    |||| ||||||| |||||||| | |||||||||||||||||||||    ||||||||| |||||||  ||||||||| ||||    
T  39033113 ttcgacagttaattgccgaggaacatttgagtaatttactcgtgtggtacagccaaaccaaatgtgggaacaacaattctca 39033032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 522 - 583
Target Start/End: Original strand, 39951212 - 39951273
Alignment:
Q  522 gcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtg 583  Q
    |||||||||||||||||   |||||||||||||||||||||  | ||||||||| |||||||    
T  39951212 gcagttaactgccgaggagcatttgagtaatttactcgtgtgacacagccaaaccaaatgtg 39951273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 481 - 594
Target Start/End: Complemental strand, 43976904 - 43976791
Alignment:
Q  481 tttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaat 580  Q
    |||||||| ||||||| | |||||||||||   ||| |||||||||||||||||||||   ||||  || | |||||||||| |||| | ||||  ||||    
T  43976904 tttcctcggcagttaactacagccggttttttaaaatttcggcagttaactgccgaggagcatttaggttaattactcgtgtatctcggtcaaatcaaat 43976805  T
Q  581 gtgtcaacaacaat 594  Q
    ||||||||| ||||    
T  43976804 gtgtcaacagcaat 43976791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 480 - 583
Target Start/End: Original strand, 22003421 - 22003525
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaa-ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaa 578  Q
    ||||||||| ||||||| ||| ||||||||    |||| |||||||||| ||| |||| ||  |||||||||||||||||||||  | ||||||||| ||    
T  22003421 ttttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagccaaaccaa 22003520  T
Q  579 atgtg 583  Q
    |||||    
T  22003521 atgtg 22003525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 552 - 592
Target Start/End: Original strand, 25515901 - 25515941
Alignment:
Q  552 tttactcgtgtttctcagccaaactaaatgtgtcaacaaca 592  Q
    ||||||| |||||||||||||||| ||||||||||||||||    
T  25515901 tttactcatgtttctcagccaaacaaaatgtgtcaacaaca 25515941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 33002037 - 33001926
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||  |||||| |||||||||||   | | |||||| |||||||||||| |||   ||||| |||| |||||||||||||||||||||   | |    
T  33002037 ttttcctcggtagttaactgcagccggtt---ccataattcgacagttaactgccaaggtgcatttgggtaaattactcgtgtttctcagccaatgcata 33001941  T
Q  580 tgtgtcaacaacaat 594  Q
    |||||| ||||||||    
T  33001940 tgtgtcgacaacaat 33001926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 491 - 571
Target Start/End: Original strand, 43258764 - 43258844
Alignment:
Q  491 agttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagcc 571  Q
    |||||| |||||||||||||   ||| ||||||||||||||||||| ||| ||||  ||||  |||| |||||||||||||    
T  43258764 agttaactgcagccggttttttcaaacttcggcagttaactgccgaaggacattttcgtaaagtactagtgtttctcagcc 43258844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 480 - 539
Target Start/End: Original strand, 7189971 - 7190030
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgaggg 539  Q
    ||||||||| ||||||| ||||||||| |||   ||| ||||||||||||||||||||||    
T  7189971 ttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaggg 7190030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 599
Target Start/End: Complemental strand, 35935234 - 35935151
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    ||||||||||||||||||||| ||  ||||| |||| ||||| |||| ||||||||||   | |||||||||| ||||| ||||    
T  35935234 aattcggcagttaactgccgaagggcatttgggtaaattacttgtgtctctcagccaatgcatatgtgtcaaccacaattctca 35935151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 526 - 600
Target Start/End: Complemental strand, 25514559 - 25514485
Alignment:
Q  526 ttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaa 600  Q
    ||||||||||| ||||||||  ||| |||||| |||||||| |||| ||| | ||||||||| |||||| |||||    
T  25514559 ttaactgccgaaggatatttacgtattttacttgtgtttctaagcctaacaagatgtgtcaagaacaattctcaa 25514485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 526 - 584
Target Start/End: Original strand, 31568648 - 31568706
Alignment:
Q  526 ttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgt 584  Q
    |||||||||||||| ||||| |||| |||||  ||||||||||||||||| | ||||||    
T  31568648 ttaactgccgaggggtattttagtattttacatgtgtttctcagccaaacaacatgtgt 31568706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 514 - 587
Target Start/End: Complemental strand, 10334455 - 10334382
Alignment:
Q  514 aaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaa 587  Q
    ||||||||||||||||||||||| ||| ||||  |||| |||||| ||| |||| ||  ||| |||||||||||    
T  10334455 aaaattcggcagttaactgccgatggacatttaggtaaattactcatgtgtctctgcttaaccaaatgtgtcaa 10334382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 480 - 536
Target Start/End: Complemental strand, 17424185 - 17424128
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaatt-cggcagttaactgccga 536  Q
    ||||||||| ||||||| ||||||||| ||| | |||||| |||||||||||||||||    
T  17424185 ttttcctcggcagttaactgcagccggattttccaaaatttcggcagttaactgccga 17424128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 4e-31; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 480 - 601
Target Start/End: Original strand, 30846815 - 30846936
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||||| |   ||| ||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||| |||    
T  30846815 ttttcctcggcagttaactgcagccggttctttaaaatttcggcagttaactgtcgaggggtatttgagtaatttactcgtgtttcttagccaaaccaaa 30846914  T
Q  580 tgtgtcaacaacaatactcaaa 601  Q
    ||| |||||| |||||||||||    
T  30846915 tgtttcaacatcaatactcaaa 30846936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 14102368 - 14102487
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| |||||||||||||||| || |   ||| ||||||||||||||| ||||||  ||||||||||||||||| |||||||||||||||| |||    
T  14102368 ttttcctcggcagttaattgcagccgattctttaaaatttcggcagttaactgtcgaggggcatttgagtaatttactcatgtttctcagccaaaccaaa 14102467  T
Q  580 tgtgtcaacaacaatactca 599  Q
    |||||||||| |||||||||    
T  14102468 tgtgtcaacagcaatactca 14102487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 14412385 - 14412504
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| |||||||||||||||| || |   ||| ||||||||||||||| ||||||  ||||||||||||||||| |||||||||||||||| |||    
T  14412385 ttttcctcggcagttaattgcagccgattctttaaaatttcggcagttaactgtcgaggggcatttgagtaatttactcatgtttctcagccaaaccaaa 14412484  T
Q  580 tgtgtcaacaacaatactca 599  Q
    |||||||||| |||||||||    
T  14412485 tgtgtcaacagcaatactca 14412504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 486 - 594
Target Start/End: Complemental strand, 7974986 - 7974878
Alignment:
Q  486 tcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtc 585  Q
    ||||||||||| ||||||||||||    | |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| | |||||||    
T  7974986 tcgacagttaactgcagccggtttcttcagaattcggcagttaactgccgaggggtatttgggtaatttactcgtgtttctcagccaaacaacatgtgtc 7974887  T
Q  586 aacaacaat 594  Q
    |||| ||||    
T  7974886 aacatcaat 7974878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 519 - 594
Target Start/End: Original strand, 34139728 - 34139803
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34139728 tcggcagttaactgccgaggggcatttgagtaatttactcgtgtttctcagccaaactcaatgtgtcaacaacaat 34139803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 38555433 - 38555552
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||||| |||| |   ||| ||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||| |||    
T  38555433 ttttcctcggcagttaactgcagctggttctttaaaatttcggcagttaactgccgaaggatatttgagtaaattactcgtgtttctcggccaaaccaaa 38555532  T
Q  580 tgtgtcaacaacaatactca 599  Q
    ||| | ||||||||||||||    
T  38555533 tgtctgaacaacaatactca 38555552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 13644474 - 13644355
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| || |||| ||||||||||| |   ||| ||||||||||||||||||  ||||||||| |||| ||||||||||||||||||||||  |||    
T  13644474 ttttcctcggcatttaactgcagccggttctttaaaatttcggcagttaactgccgtaggatatttgggtaaattactcgtgtttctcagccaaatcaaa 13644375  T
Q  580 tgtgtcaacaacaatactca 599  Q
    ||||| ||||||||||||||    
T  13644374 tgtgtgaacaacaatactca 13644355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 14101499 - 14101382
Alignment:
Q  482 ttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatg 581  Q
    ||||||| ||||||  ||||||||||| |   ||| ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||  |||||    
T  14101499 ttcctcggcagttagctgcagccggttctttaaaatttcggcagttaactgccaaggggcatttgagtaatttactcgtgtttctcagccaaatcaaatg 14101400  T
Q  582 tgtcaacaacaatactca 599  Q
    ||| |||| |||||||||    
T  14101399 tgtgaacatcaatactca 14101382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 14411516 - 14411399
Alignment:
Q  482 ttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatg 581  Q
    ||||||| ||||||  ||||||||||| |   ||| ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||  |||||    
T  14411516 ttcctcggcagttagctgcagccggttctttaaaatttcggcagttaactgccaaggggcatttgagtaatttactcgtgtttctcagccaaatcaaatg 14411417  T
Q  582 tgtcaacaacaatactca 599  Q
    ||| |||| |||||||||    
T  14411416 tgtgaacatcaatactca 14411399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 11886012 - 11885898
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||| ||||| |   ||| ||||  | |||| |||||||||| |||||| ||||||||||||||||||||||||||| |||    
T  11886012 ttttcctcggcagttaactgcagtcggttctttaaaatttcgataattaattgccgagggacatttgaataatttactcgtgtttctcagccaaacgaaa 11885913  T
Q  580 tgtgtcaacaacaat 594  Q
    |||||||||||||||    
T  11885912 tgtgtcaacaacaat 11885898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 480 - 598
Target Start/End: Original strand, 47751205 - 47751322
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||| ||||||| |||| ||||||| |||||   ||| |||||||||||| |||||| || |||||||||||||||||||||||| ||||| |||| |||    
T  47751205 ttttactcgaca-ttaaatgcagccagtttttttaaatttcggcagttaagtgccgaagggtatttgagtaatttactcgtgtttatcagctaaaccaaa 47751303  T
Q  580 tgtgtcaacaacaatactc 598  Q
    | |||||||||||||||||    
T  47751304 tatgtcaacaacaatactc 47751322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 483 - 594
Target Start/End: Original strand, 19804512 - 19804623
Alignment:
Q  483 tcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgt 582  Q
    |||||| ||||||| ||||||||||||    ||| |||||||||||||| |||||||  ||||  |||| |||||||||| |||||||||||| ||||||    
T  19804512 tcctcggcagttaactgcagccggtttccacaaacttcggcagttaactaccgaggggcatttaggtaaattactcgtgtgtctcagccaaacaaaatgt 19804611  T
Q  583 gtcaacaacaat 594  Q
    ||||||||||||    
T  19804612 gtcaacaacaat 19804623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 490 - 600
Target Start/End: Complemental strand, 38555133 - 38555023
Alignment:
Q  490 cagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaaca 589  Q
    ||||||| ||||||||||| |   ||| || ||||||||||| |||||    |||| |||||||||||||| ||||||| ||||||||||||||||||||    
T  38555133 cagttaactgcagccggttctttaaaattttggcagttaactaccgagaagcatttaagtaatttactcgtatttctcaaccaaactaaatgtgtcaaca 38555034  T
Q  590 acaatactcaa 600  Q
    |||||||||||    
T  38555033 acaatactcaa 38555023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 519 - 599
Target Start/End: Original strand, 42795139 - 42795219
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    ||||||||||||||||||||||||||||||||||||||||||||  | ||||||||| ||| |||  ||||||||| ||||    
T  42795139 tcggcagttaactgccgagggatatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctca 42795219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 480 - 562
Target Start/End: Complemental strand, 49140706 - 49140627
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgt 562  Q
    ||||||||| ||||||| |||||||||||| |    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  49140706 ttttcctcggcagttaactgcagccggtttcat---aattcggcagttaactgccgaggggtatttgagtaatttactcgtgt 49140627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 480 - 589
Target Start/End: Original strand, 29097880 - 29097986
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||  |||||| |||||||||||   | | |||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||   | |    
T  29097880 ttttcctcggtagttaactgcagccggtt---ccataattcggcagttaactgccgagggatatttggataaattactcgtgtttctcagccaatgcata 29097976  T
Q  580 tgtgtcaaca 589  Q
    ||||||||||    
T  29097977 tgtgtcaaca 29097986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 501 - 600
Target Start/End: Complemental strand, 47521449 - 47521350
Alignment:
Q  501 agccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaa 600  Q
    ||||||||||   ||| |||||||||||||||||||| |  ||||  |||| |||||||||||||||||| |||| |||||||||||||||||| |||||    
T  47521449 agccggttttctaaaacttcggcagttaactgccgagaggcatttaggtaaattactcgtgtttctcagctaaaccaaatgtgtcaacaacaattctcaa 47521350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 19072490 - 19072376
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| || ||||| || |   ||| || |||||||||||| ||||||  |||||||||||||||||||||||||||||| ||| |||    
T  19072490 ttttcctcggcagttaactgtagccgattctttaaaattttggcagttaactgtcgaggggcatttgagtaatttactcgtgtttctcagccgaaccaaa 19072391  T
Q  580 tgtgtcaacaacaat 594  Q
    ||||| |||| ||||    
T  19072390 tgtgtgaacagcaat 19072376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 516 - 594
Target Start/End: Original strand, 31324862 - 31324939
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||||||| ||||||||| |||||| || ||||||||||||||||||| ||||| | ||||||||||||||||    
T  31324862 aattcggcagttaattgccgaggg-tatttgggttatttactcgtgtttctcagtcaaaccacatgtgtcaacaacaat 31324939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 480 - 589
Target Start/End: Original strand, 11886904 - 11887013
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||  ||||||| ||||||||||| |   | | |||||||||||| ||| || ||||||||| |||| |||||||||||||| ||||||||||||    
T  11886904 ttttcctcagcagttaactgcagccggttctttaagatttcggcagttaattgctgaaggatatttgggtaaattactcgtgtttcttagccaaactaaa 11887003  T
Q  580 tgtgtcaaca 589  Q
    ||||| ||||    
T  11887004 tgtgtgaaca 11887013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 480 - 583
Target Start/End: Complemental strand, 42582165 - 42582065
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| || ||||||||| |    ||||||||||||||||||||||||| |||||||||||||||||||||  |  |||||||| |||    
T  42582165 ttttcctcggcagttaactgtagccggtttcat---aattcggcagttaactgccgagggacatttgagtaatttactcgtgtggcatagccaaaccaaa 42582069  T
Q  580 tgtg 583  Q
    ||||    
T  42582068 tgtg 42582065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 516 - 601
Target Start/End: Complemental strand, 48589822 - 48589737
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaaa 601  Q
    |||||||||||||||||  ||| | |||||   ||||||||||||||||||||||||||| | |||||||||||||||| ||||||    
T  48589822 aattcggcagttaactgttgagaggtatttagataatttactcgtgtttctcagccaaacaacatgtgtcaacaacaattctcaaa 48589737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 48901462 - 48901578
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||  |||||| |||||||||||   | | ||||||||||||||||||| || || ||||| |||| |||||||||||||||||||||   | |    
T  48901462 ttttcctcggtagttaactgcagccggtt---ccataattcggcagttaactgcctagagacatttgggtaaattactcgtgtttctcagccaatgcata 48901558  T
Q  580 tgtgtcaacaacaatactca 599  Q
    ||||||||||||||| ||||    
T  48901559 tgtgtcaacaacaattctca 48901578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 514 - 594
Target Start/End: Original strand, 36781503 - 36781583
Alignment:
Q  514 aaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||||| ||| || ||||||||||||| |||| |||||||| |||||||||||||  ||| ||||||||||||||    
T  36781503 aaaattcggcaggtaattgtcgagggatatttgggtaaattactcgtatttctcagccaaatcaaacgtgtcaacaacaat 36781583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 479 - 599
Target Start/End: Original strand, 48590358 - 48590478
Alignment:
Q  479 attttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaa 578  Q
    ||||||||||  |||||| |||||||| ||||   | |||||| ||||||||||   |||| |||||| ||||||||||  |||||||||||||||| |     
T  48590358 attttcctcggtagttaactgcagccgatttttttagaattcgacagttaactgtataggggtatttgggtaatttactaatgtttctcagccaaacaac 48590457  T
Q  579 atgtgtcaacaacaatactca 599  Q
    |||||||||||||||| ||||    
T  48590458 atgtgtcaacaacaattctca 48590478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 49141641 - 49141752
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||||||||||| |    ||||| ||||||||||||||||||  |||||||||||||||||||||  |  |||||||| |||    
T  49141641 ttttcctcggcagttaactgcagccggtttcat---aattctgcagttaactgccgaggggcatttgagtaatttactcgtgtggcatagccaaaccaaa 49141737  T
Q  580 tgtgtcaacaacaat 594  Q
    ||||  |||||||||    
T  49141738 tgtgggaacaacaat 49141752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 523 - 590
Target Start/End: Original strand, 28115536 - 28115603
Alignment:
Q  523 cagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaa 590  Q
    ||||||||| |||| ||||||||| |||| |||||||||||| |||||||||| ||||||||||||||    
T  28115536 cagttaactaccgaaggatatttgggtaaattactcgtgtttttcagccaaaccaaatgtgtcaacaa 28115603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 10524377 - 10524491
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||   |||||||   ||| |||| |||||||||||||||||  |||||||||||||||||||||  | ||||||||| |||    
T  10524377 ttttcctcggcagttaactgccatcggttttctaaaacttcgacagttaactgccgaggggcatttgagtaatttactcgtgtgacacagccaaaccaaa 10524476  T
Q  580 tgtgtcaacaacaat 594  Q
    ||||  |||||||||    
T  10524477 tgtgggaacaacaat 10524491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 516 - 594
Target Start/End: Original strand, 27658029 - 27658107
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||||||||| ||||| ||||| |||| ||||| ||||||||||||||||   |||||||||||| ||||    
T  27658029 aattcggcagttaactgccaagggacatttgggtaaattactagtgtttctcagccaaaggtaatgtgtcaacatcaat 27658107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 480 - 587
Target Start/End: Complemental strand, 28563711 - 28563607
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| || ||||||||| |    ||||||||||||||||| ||||||| ||||| ||||  |||| |||||||||||||||| | ||    
T  28563711 ttttcctcggcagttaactgtagccggtttcat---aattcggcagttaactgtcgagggacatttgggtaaactactagtgtttctcagccaaagttaa 28563615  T
Q  580 tgtgtcaa 587  Q
    ||||||||    
T  28563614 tgtgtcaa 28563607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 523 - 600
Target Start/End: Original strand, 38489302 - 38489379
Alignment:
Q  523 cagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaa 600  Q
    ||||||||||| |||||| ||||||||||||||| | | ||| | |||||||| |||||||||||||||||| |||||    
T  38489302 cagttaactgctgagggacatttgagtaatttacccatatttgtaagccaaaccaaatgtgtcaacaacaattctcaa 38489379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 480 - 583
Target Start/End: Complemental strand, 46907589 - 46907489
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||||||||||| |    ||||||||||||||||||||| ||  |||||||||||||||||||||  |  |||||||| |||    
T  46907589 ttttcctcggcagttaactgcagccggtttcat---aattcggcagttaactgccgaagggcatttgagtaatttactcgtgtggcatagccaaaccaaa 46907493  T
Q  580 tgtg 583  Q
    ||||    
T  46907492 tgtg 46907489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 482 - 598
Target Start/End: Complemental strand, 30846002 - 30845886
Alignment:
Q  482 ttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatg 581  Q
    ||||||| ||||||| ||||||||||| |   ||| || ||||||||||| | || | ||||||| |||| ||| ||||||||||||  ||||| |||||    
T  30846002 ttcctcggcagttaactgcagccggttcttaaaaattttggcagttaacttctgaagaatatttgggtaaattattcgtgtttctcaatcaaaccaaatg 30845903  T
Q  582 tgtcaacaacaatactc 598  Q
    ||| |||||||||||||    
T  30845902 tgtgaacaacaatactc 30845886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 478 - 594
Target Start/End: Original strand, 45258022 - 45258138
Alignment:
Q  478 cattttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaacta 577  Q
    ||||||||||| ||||||| ||||||||  |||   ||| ||  ||||||||||||||||||  |||||||||||||||||||||  | ||||||||  |    
T  45258022 cattttcctcggcagttaactgcagccgtatttctaaaatttatgcagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaatca 45258121  T
Q  578 aatgtgtcaacaacaat 594  Q
    ||||||  |||||||||    
T  45258122 aatgtgagaacaacaat 45258138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 519 - 594
Target Start/End: Complemental strand, 47669622 - 47669546
Alignment:
Q  519 tcggcagttaactgccga-gggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||| |||| ||| |||||  ||| |||||||||||||||||||| ||| ||||||||||||||||||    
T  47669622 tcggcagttaactaccgaaggggtattttggtattttactcgtgtttctcagcctaacaaaatgtgtcaacaacaat 47669546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 480 - 575
Target Start/End: Complemental strand, 7122 - 7027
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaac 575  Q
    ||||||||| ||||||| ||||||||  |||   ||| ||||| ||||||||||||||||  |||||||||||||||||||||  | |||||||||    
T  7122 ttttcctcggcagttaactgcagccgtatttctaaaacttcggtagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaac 7027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 480 - 583
Target Start/End: Original strand, 12210610 - 12210713
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||| ||||  |||   ||| ||||||||||||||||||||||  ||||||||||||||||||| |  | ||||||||| |||    
T  12210610 ttttcctcggcagttaactgcggccgtatttctaaaacttcggcagttaactgccgaggggcatttgagtaatttactcgtatggcacagccaaaccaaa 12210709  T
Q  580 tgtg 583  Q
    ||||    
T  12210710 tgtg 12210713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 594
Target Start/End: Original strand, 7953813 - 7953891
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||||||||||||||||| |||||  ||  |||||  |||||| |||||||||| |||||||| |||||||||    
T  7953813 aattcggcagttaactgccgaggggtattttcgtcttttacatgtgtttatcagccaaaccaaatgtgttaacaacaat 7953891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 480 - 562
Target Start/End: Original strand, 17840910 - 17840992
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgt 562  Q
    ||||||||| ||||||| ||||| ||| |||   ||| ||||||||||||||||||| | | |||||||||||||||||||||    
T  17840910 ttttcctcggcagttaactgcagtcggatttctaaaacttcggcagttaactgccgatgaacatttgagtaatttactcgtgt 17840992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 484 - 594
Target Start/End: Complemental strand, 41734240 - 41734130
Alignment:
Q  484 cctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtg 583  Q
    ||||||||||||| || ||||||| |    |||||||| |||||||||||||| ||  |||| | ||| |||||||||  |||||||| ||| |||||||    
T  41734240 cctcgacagttaactgtagccggtatccacaaaattcgacagttaactgccgaagggcatttaaataaattactcgtgcgtctcagcctaaccaaatgtg 41734141  T
Q  584 tcaacaacaat 594  Q
    |||||||||||    
T  41734140 tcaacaacaat 41734130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 474 - 594
Target Start/End: Original strand, 18109788 - 18109909
Alignment:
Q  474 ttttcattttcctcgacagttaattgcagccggttttacgaaaa-ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagcca 572  Q
    ||||| ||||||||| ||||||| ||| |||||||  || |||| |||| ||||| |||||||| ||  |||||| ||||||||||||||  | ||||||    
T  18109788 ttttcgttttcctcggcagttaactgccgccggttgcacaaaaacttcgacagtttactgccgaagggcatttgaataatttactcgtgtagcacagcca 18109887  T
Q  573 aactaaatgtgtcaacaacaat 594  Q
    ||| |||||||  |||||||||    
T  18109888 aaccaaatgtgggaacaacaat 18109909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 481 - 606
Target Start/End: Complemental strand, 27657090 - 27656965
Alignment:
Q  481 tttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaat 580  Q
    |||||||| ||||||| ||||||||  |||   ||| || |||||||||||||||||||  |||||| ||||||||||||||  | || |||||| ||||    
T  27657090 tttcctcggcagttaactgcagccgtatttctaaaactttggcagttaactgccgaggggcatttgaataatttactcgtgtggcacaaccaaaccaaat 27656991  T
Q  581 gtgtcaacaacaatactcaaaaggga 606  Q
    |||  |||| |||| ||||| |||||    
T  27656990 gtgggaacagcaattctcaagaggga 27656965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 29112426 - 29112310
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||||||||||| |    || |||||| |||||||||||||   |||||||||| ||||| |||||| ||||||||   | |    
T  29112426 ttttcctcggcagttaactgcagccggtttcat---aactcggcaattaactgccgaggagcatttgagtaaattacttgtgtttttcagccaatgcata 29112330  T
Q  580 tgtgtcaacaacaatactca 599  Q
    ||||||||||||||| ||||    
T  29112329 tgtgtcaacaacaattctca 29112310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 516 - 589
Target Start/End: Original strand, 29113165 - 29113238
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaaca 589  Q
    ||||||||||| |||||||||||||||||||  ||| |||||| ||||||||||||||   | |||||||||||    
T  29113165 aattcggcagtaaactgccgagggatatttggataaattactcatgtttctcagccaatgcatatgtgtcaaca 29113238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 523 - 599
Target Start/End: Original strand, 5541606 - 5541682
Alignment:
Q  523 cagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    |||||||||||| | ||  ||||  |||| |||||||||| |||||||||||| |||||||||||||||||| ||||    
T  5541606 cagttaactgccaaagggcatttaggtaaattactcgtgtgtctcagccaaaccaaatgtgtcaacaacaatcctca 5541682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 491 - 575
Target Start/End: Complemental strand, 12027382 - 12027298
Alignment:
Q  491 agttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaac 575  Q
    |||||| ||||||| ||||| | ||| |||||||||||||  ||||||   ||||||||||||||| ||||||| ||||||||||    
T  12027382 agttaactgcagccagtttttcaaaatttcggcagttaacaaccgaggagcatttgagtaatttacccgtgtttttcagccaaac 12027298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 594
Target Start/End: Original strand, 13921322 - 13921398
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||||||||||||||   |||||||||||||||||||||  | || |||||| |||||||  |||||||||    
T  13921322 ttcggcagttaactgccgaggagcatttgagtaatttactcgtgtggcacaaccaaaccaaatgtgggaacaacaat 13921398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 594
Target Start/End: Original strand, 37345157 - 37345237
Alignment:
Q  514 aaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||| |||||||||||||| ||| ||||  |||| |||||||||| |||||||| ||| |||| |||||||| ||||    
T  37345157 aaaattcgacagttaactgccgaaggacatttaggtaaattactcgtgtgtctcagcctaaccaaatatgtcaacatcaat 37345237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 522 - 594
Target Start/End: Complemental strand, 38083818 - 38083746
Alignment:
Q  522 gcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||||||||  ||||||||||| |||||||||  | ||||||||| |||||||  |||||||||    
T  38083818 gcagttaactgccgaggggcatttgagtaatgtactcgtgtgacacagccaaaccaaatgtggaaacaacaat 38083746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 516 - 556
Target Start/End: Original strand, 38266157 - 38266197
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttac 556  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  38266157 aattcggcagttaactgccgagggacatttgagtaatttac 38266197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 480 - 562
Target Start/End: Complemental strand, 42794246 - 42794167
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgt 562  Q
    ||||||||| ||||||| |||||||||||| |    ||||||||||||| |||||||||   |||||||||||||||||||||    
T  42794246 ttttcctcggcagttaactgcagccggtttcat---aattcggcagttatctgccgaggagcatttgagtaatttactcgtgt 42794167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 483 - 573
Target Start/End: Complemental strand, 48000268 - 48000181
Alignment:
Q  483 tcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaa 573  Q
    |||||||||||||| ||||| |||||   | | |||||| ||||||||||||||||| ||||||  ||| ||||| |||||||||||||||    
T  48000268 tcctcgacagttaactgcagtcggtt---ccataattcgacagttaactgccgaggggtatttggataaattactagtgtttctcagccaa 48000181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 516 - 599
Target Start/End: Original strand, 12081249 - 12081332
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    ||||||||| ||||||||||| ||  |||||  ||| |||||||||||||||||||||   | |||||||||||||||| ||||    
T  12081249 aattcggcaattaactgccgaagggcatttggataaattactcgtgtttctcagccaatacatatgtgtcaacaacaattctca 12081332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 13645362 - 13645474
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||| ||| |   ||| ||| |||||||||| |||||||  ||||| |||||||||||||| |||||||  ||||   |    
T  13645362 ttttcctcggcagttaactgcagcctgttctttaaaatttcagcagttaactcccgaggggcatttgtgtaatttactcgtggttctcagtgaaac--ca 13645459  T
Q  580 tgtgtcaacaacaat 594  Q
    |||||||||||||||    
T  13645460 tgtgtcaacaacaat 13645474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 481 - 594
Target Start/End: Original strand, 18219980 - 18220090
Alignment:
Q  481 tttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaat 580  Q
    ||||||||| |||||| |||||||||||   | | ||||||||| |||||||||||| || |||| ||||||||||  |||||| |||||| ||  ||||    
T  18219980 tttcctcgatagttaactgcagccggtt---ccataattcggcaattaactgccgagagacatttaagtaatttacatgtgtttttcagcctaagcaaat 18220076  T
Q  581 gtgtcaacaacaat 594  Q
    ||||  ||||||||    
T  18220077 gtgtatacaacaat 18220090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 519 - 598
Target Start/End: Complemental strand, 32606815 - 32606736
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactc 598  Q
    |||| ||||||||||||| ||| ||||| |||| ||||  |||||||||||||||    |||||||||||||||||||||    
T  32606815 tcgggagttaactgccgaaggacatttgggtaaattaccagtgtttctcagccaatggcaatgtgtcaacaacaatactc 32606736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 42583080 - 42583199
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||  |||   ||| |||  ||||||||||||||| | ||||||||||||||||||||||  | || |||||| |||    
T  42583080 ttttcctcggcagttaactgcagccgtatttctaaaacttctacagttaactgccgagaggtatttgagtaatttactcgtgtggcacatccaaaccaaa 42583179  T
Q  580 tgtgtcaacaacaatactca 599  Q
     |||  ||||||||| ||||    
T  42583180 agtgggaacaacaattctca 42583199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 516 - 594
Target Start/End: Original strand, 38084803 - 38084881
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||||||||||||||  ||||| |||| ||||| |||||| ||||||||    |||||||||||| ||||    
T  38084803 aattcggcagttaactgccgaggggcatttgggtaaattactagtgtttttcagccaatggtaatgtgtcaacagcaat 38084881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 553 - 594
Target Start/End: Original strand, 556738 - 556779
Alignment:
Q  553 ttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||| |||||||||||| ||||||||||||||||||    
T  556738 ttactcgtgtgtctcagccaaacaaaatgtgtcaacaacaat 556779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 542 - 599
Target Start/End: Original strand, 40141309 - 40141366
Alignment:
Q  542 atttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    |||||||||||||||||||||  | ||||||||||| |||||  ||||||||||||||    
T  40141309 atttgagtaatttactcgtgtggcacagccaaactatatgtgggaacaacaatactca 40141366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 516 - 568
Target Start/End: Original strand, 8522192 - 8522244
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctca 568  Q
    ||||||| |||||||| |||||||| |||||||||  ||||||||||||||||    
T  8522192 aattcggtagttaactaccgagggacatttgagtatattactcgtgtttctca 8522244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 521 - 573
Target Start/End: Original strand, 25195981 - 25196033
Alignment:
Q  521 ggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaa 573  Q
    |||||||||||||||| ||| ||||  |||| |||||||||||||||||||||    
T  25195981 ggcagttaactgccgatggacatttatgtaaattactcgtgtttctcagccaa 25196033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 514 - 594
Target Start/End: Complemental strand, 31323068 - 31322988
Alignment:
Q  514 aaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||||||||| ||| || ||||    |||||||| ||| |||||||||||||| | ||||||||||| ||||    
T  31323068 aaaattcggcagttaactgtcgatgggtattcagataatttacccgtatttctcagccaaaccacatgtgtcaacatcaat 31322988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 519 - 594
Target Start/End: Complemental strand, 40140753 - 40140677
Alignment:
Q  519 tcggcagttaactgccgaggga-tatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||||| |||| | ||||| | || |||||| |||||||||||||||||   ||||||||||||||||    
T  40140753 tcggcagttaactgcagaggaagtattttaatattttactggtgtttctcagccaaacatgatgtgtcaacaacaat 40140677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 47750577 - 47750466
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||  |||||| |||||||||||   | | ||||||||||||||||||||||||  |||||  ||| ||||  |||||||||||||||     |    
T  47750577 ttttcctcgggagttaactgcagccggtt---ccataattcggcagttaactgccgaggggcatttggataaattaccagtgtttctcagccaatggcga 47750481  T
Q  580 tgtgtcaacaacaat 594  Q
    |||||||||||||||    
T  47750480 tgtgtcaacaacaat 47750466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 480 - 575
Target Start/End: Original strand, 8067 - 8162
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaac 575  Q
    ||||||||| ||||||| ||||||||  |||   ||| ||| | ||||||||||||||||  |||||||||||||||| ||||  | |||||||||    
T  8067 ttttcctcggcagttaactgcagccgtatttctaaaacttctgtagttaactgccgaggggcatttgagtaatttacttgtgtggcacagccaaac 8162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 480 - 575
Target Start/End: Original strand, 46908493 - 46908588
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaac 575  Q
    ||||||||| ||||||| ||||||||  |||   ||| |||| ||||||||||||||| | ||||| | ||||||||||||||  | |||||||||    
T  46908493 ttttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactgccgagaggtatttaaataatttactcgtgtggcacagccaaac 46908588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 478 - 583
Target Start/End: Original strand, 618743 - 618849
Alignment:
Q  478 cattttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccga-gggatatttgagtaatttactcgtgtttctcagccaaact 576  Q
    ||||||||||| ||||||| ||||||||| |||   |    |||||||||||||||||| |||||||||| |||| ||||||||||  | |||||| |||    
T  618743 cattttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaggggatatttgcgtaaattactcgtgtggcacagccatact 618842  T
Q  577 aaatgtg 583  Q
    | |||||    
T  618843 atatgtg 618849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 516 - 573
Target Start/End: Complemental strand, 48900877 - 48900820
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaa 573  Q
    ||||||||||||||||||| | |  |||||| |||| ||||| |||||||||||||||    
T  48900877 aattcggcagttaactgccaatgagtatttgggtaaattacttgtgtttctcagccaa 48900820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 2e-29; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 480 - 598
Target Start/End: Complemental strand, 32592270 - 32592152
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||| | ||| |   ||| |||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||    
T  32592270 ttttcctcggcagttaactgcagtcagttctttaaaatttcgacagctaactgccgagggacatttgagtaatttactcgtgtttctcagccaaaccaaa 32592171  T
Q  580 tgtgtcaacaacaatactc 598  Q
    |||||||||||||||||||    
T  32592170 tgtgtcaacaacaatactc 32592152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 14043918 - 14044037
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||||||| ||||   ||| |||| |||||||||||||| || |||||| |||| |||||||||||||||||||||||||||    
T  14043918 ttttcctcggcagttaactgcagccgattttctaaaacttcgacagttaactgccgaagggtatttgggtaaattactcgtgtttctcagccaaactaaa 14044017  T
Q  580 tgtgtcaacaacaatactca 599  Q
    ||||| ||||||||| ||||    
T  14044018 tgtgtaaacaacaattctca 14044037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 516 - 594
Target Start/End: Original strand, 1294133 - 1294211
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||| | ||||||||||||||||    
T  1294133 aattcggcagttaactgccgaggggtatttgggtaatttactcgtgtttctcagtcaaacaacatgtgtcaacaacaat 1294211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 480 - 598
Target Start/End: Complemental strand, 7941163 - 7941045
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||  ||||||| ||||||||||| |   ||| ||||||||||||||||||| || |||||  |||| ||||||||||||||||||||||| |||    
T  7941163 ttttcctcagcagttaactgcagccggttctttaaaatttcggcagttaactgccgaagggtatttaggtaaattactcgtgtttctcagccaaaccaaa 7941064  T
Q  580 tgtgtcaacaacaatactc 598  Q
    ||||| |||||||||||||    
T  7941063 tgtgtgaacaacaatactc 7941045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 34645615 - 34645501
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||| |||||| ||||| |||||||    ||| |||||||||||||||||| ||||||||  |||| |||||||||||||||||||||  ||||    
T  34645615 ttttcctcgagagttaactgcagtcggttttgaagaaactcggcagttaactgccgaaggatatttaggtaaattactcgtgtttctcagccaaggtaaa 34645516  T
Q  580 tgtgtcaacaacaat 594  Q
    |||||||||||||||    
T  34645515 tgtgtcaacaacaat 34645501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 52514341 - 52514230
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||| |||||| |||||||||||   | | |||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||   | |    
T  52514341 ttttcctcgatagttaactgcagccggtt---ccataattcggcagttaattgccgaggggtatttgagtaaattactcgtgtttctcagccaatacata 52514245  T
Q  580 tgtgtcaacaacaat 594  Q
    |||||||||||||||    
T  52514244 tgtgtcaacaacaat 52514230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 480 - 599
Target Start/End: Original strand, 45076270 - 45076389
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||| |||| ||||||| | ||||||||| |   ||| ||||||||||||||||||| ||||||||| |||| |||||||| |||||||||||||| |||    
T  45076270 tttttctcggcagttaactacagccggttctttaaaatttcggcagttaactgccgaaggatatttgggtaaattactcgtatttctcagccaaaccaaa 45076369  T
Q  580 tgtgtcaacaacaatactca 599  Q
     |||| ||||||||||||||    
T  45076370 agtgtgaacaacaatactca 45076389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 480 - 598
Target Start/End: Original strand, 11270304 - 11270422
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||| | ||||||| ||||||||||| |   ||| ||||||||||||||| |||  || |||||| |||||||||||||||||||||||||| ||||    
T  11270304 ttttccttggcagttaactgcagccggttcttttaaatttcggcagttaactgtcgaaagacatttgaataatttactcgtgtttctcagccaaattaaa 11270403  T
Q  580 tgtgtcaacaacaatactc 598  Q
    ||||| |||| ||||||||    
T  11270404 tgtgtaaacagcaatactc 11270422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 521 - 598
Target Start/End: Original strand, 20485597 - 20485674
Alignment:
Q  521 ggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactc 598  Q
    |||||||||||||||| || |||||| |||| |||||||||||||||||||||||||||||||| |||| ||||||||    
T  20485597 ggcagttaactgccgaagggtatttgggtaaattactcgtgtttctcagccaaactaaatgtgtgaacatcaatactc 20485674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 480 - 584
Target Start/End: Complemental strand, 2062439 - 2062335
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||||||||||| ||||||| |||||   ||| ||||||||||||||||||| || ||||||  ||| |||||||| |||||||||||||| |||    
T  2062439 ttttcctcgacagttaactgcagccagttttctaaaacttcggcagttaactgccgaagggtatttggataaattactcgtatttctcagccaaaccaaa 2062340  T
Q  580 tgtgt 584  Q
    |||||    
T  2062339 tgtgt 2062335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 10492893 - 10493004
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| |||||||||||||||||||| |    ||||||||||||||||| ||||||  ||||| |||| ||||| ||||||||||||||||   ||    
T  10492893 ttttcctcggcagttaattgcagccggtttcat---aattcggcagttaactgtcgaggggcatttgggtaaattactagtgtttctcagccaaaggtaa 10492989  T
Q  580 tgtgtcaacaacaat 594  Q
    |||||||||||||||    
T  10492990 tgtgtcaacaacaat 10493004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 480 - 600
Target Start/End: Original strand, 50998700 - 50998820
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||| ||| ||||||| ||||||||| ||||  ||| ||||||||||||||||||||||  |||||||||||||||||||||  | ||||||||| |||    
T  50998700 ttttcttcggcagttaactgcagccggatttataaaacttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaaccaaa 50998799  T
Q  580 tgtgtcaacaacaatactcaa 600  Q
    || |  ||||||||| |||||    
T  50998800 tgcgggaacaacaattctcaa 50998820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 480 - 595
Target Start/End: Complemental strand, 10658876 - 10658761
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||  ||||||||||| |   ||| ||||||||||||| ||||| ||| |||||  |||||||||| |||||||||||||||| |||    
T  10658876 ttttcctcggcagttagctgcagccggttcttttaaatttcggcagttaacagccgaaggacatttgcataatttactcatgtttctcagccaaaccaaa 10658777  T
Q  580 tgtgtcaacaacaata 595  Q
    ||| ||||||||||||    
T  10658776 tgtatcaacaacaata 10658761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 480 - 602
Target Start/End: Original strand, 27739587 - 27739709
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||  |||   ||| ||||||||||||||||||| || ||||||||||||||||||||||  | ||||||||| |||    
T  27739587 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagccaaaccaaa 27739686  T
Q  580 tgtgtcaacaacaatactcaaaa 602  Q
     |||  ||||||||| |||||||    
T  27739687 agtgggaacaacaattctcaaaa 27739709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 34543156 - 34543270
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||  |||   ||| ||||||||||||||||||||||| ||||||||||||||||| |||  | ||||||||| |||    
T  34543156 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgagggacatttgagtaatttactcatgtggcacagccaaaccaaa 34543255  T
Q  580 tgtgtcaacaacaat 594  Q
    ||||  |||||||||    
T  34543256 tgtgggaacaacaat 34543270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 521 - 594
Target Start/End: Original strand, 26494557 - 26494630
Alignment:
Q  521 ggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||||| ||| | | |||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  26494557 ggcagttaactgtcgatgaacatttgagtaatttactcgtgtttctcagccaaaccaaatgtatcaacaacaat 26494630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 482 - 587
Target Start/End: Complemental strand, 32743258 - 32743153
Alignment:
Q  482 ttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatg 581  Q
    ||||||| ||||||| |||||| |||| |   ||| ||||||| ||||||||||| ||| ||||||||||||||| |||||||||||||||||| ||||     
T  32743258 ttcctcggcagttaactgcagctggttctttaaaatttcggcaattaactgccgatggacatttgagtaatttacccgtgtttctcagccaaaccaaata 32743159  T
Q  582 tgtcaa 587  Q
    ||||||    
T  32743158 tgtcaa 32743153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 482 - 599
Target Start/End: Complemental strand, 50330663 - 50330546
Alignment:
Q  482 ttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatg 581  Q
    ||||||| ||||||| |||||||| || |   ||| |||| || |||||||||||| |  ||||||||||||||||||||||| |||||||||| |||||    
T  50330663 ttcctcggcagttaactgcagccgattctttaaaatttcgacaattaactgccgagaggcatttgagtaatttactcgtgtttatcagccaaaccaaatg 50330564  T
Q  582 tgtcaacaacaatactca 599  Q
    ||| ||||||||| ||||    
T  50330563 tgtgaacaacaattctca 50330546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 521 - 598
Target Start/End: Complemental strand, 51755682 - 51755605
Alignment:
Q  521 ggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactc 598  Q
    ||||||||||||| |||||  ||||||||||||||||||| |||||||||||||| |||||||||| || ||||||||    
T  51755682 ggcagttaactgctgaggggcatttgagtaatttactcgtatttctcagccaaaccaaatgtgtcagcagcaatactc 51755605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 491 - 594
Target Start/End: Complemental strand, 17561801 - 17561698
Alignment:
Q  491 agttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaa 590  Q
    |||||| |||||||||||||   ||| ||||||||||||||| | ||||| ||||  |||| |||||||||| |||||||||||  ||||||||||||||    
T  17561801 agttaactgcagccggttttctaaaatttcggcagttaactgtcaagggacatttaggtaaattactcgtgtgtctcagccaaatcaaatgtgtcaacaa 17561702  T
Q  591 caat 594  Q
    ||||    
T  17561701 caat 17561698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 12897877 - 12897763
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||  |||   ||| |||||||||||||||| ||||| ||||||||||||||||||||||  | ||||||||| |||    
T  12897877 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgctgaggggtatttgagtaatttactcgtgtggcacagccaaaccaaa 12897778  T
Q  580 tgtgtcaacaacaat 594  Q
     |||  |||||||||    
T  12897777 agtgggaacaacaat 12897763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 492 - 594
Target Start/End: Original strand, 34648236 - 34648338
Alignment:
Q  492 gttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaac 591  Q
    ||||| |||||||||||||    ||| ||| ||||||||||| ||||| ||||||||||| ||||  |||||||||||||||  ||||||||||||||||    
T  34648236 gttaactgcagccggttttgaagaaactcgacagttaactgctgaggggtatttgagtaaattacatgtgtttctcagccaaggtaaatgtgtcaacaac 34648335  T
Q  592 aat 594  Q
    |||    
T  34648336 aat 34648338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 514 - 583
Target Start/End: Complemental strand, 4330811 - 4330742
Alignment:
Q  514 aaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtg 583  Q
    |||||||||||||||||||||||||   ||||||||||||||| |||||||| ||||||||| |||||||    
T  4330811 aaaattcggcagttaactgccgaggagcatttgagtaatttacccgtgtttcccagccaaaccaaatgtg 4330742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 480 - 589
Target Start/End: Complemental strand, 6143724 - 6143615
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||||| |   ||| ||| ||| ||||||||||| ||| ||||||||||||||||||| |||||| ||||||| |||    
T  6143724 ttttcctcggcagttaactgcagccggttcttttaaatttcagcaattaactgccgaaggacatttgagtaatttactcgtttttctcggccaaaccaaa 6143625  T
Q  580 tgtgtcaaca 589  Q
     |||| ||||    
T  6143624 cgtgtaaaca 6143615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 480 - 601
Target Start/End: Original strand, 28817021 - 28817142
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||  |||   ||| || ||||||||||||||||||| ||||||||||||||||||||||  | ||||||||| |||    
T  28817021 ttttcctcggcagttaactgcagccgtatttctaaaactttggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccaaaccaaa 28817120  T
Q  580 tgtgtcaacaacaatactcaaa 601  Q
     |||  |||| |||| ||||||    
T  28817121 agtgggaacatcaattctcaaa 28817142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 519 - 594
Target Start/End: Complemental strand, 2743412 - 2743336
Alignment:
Q  519 tcggcagttaactgccgaggg-atatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||| | |||||  |||||||||    
T  2743412 tcggcagttaactgccgaggggatatttgggtaatttacttgtgtttctcagccaaacaacatgtgggaacaacaat 2743336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 480 - 598
Target Start/End: Original strand, 32744172 - 32744287
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||  |||||| |||||||||||   | | |||||||||||||||| |||||||  ||||| |||| ||||| |||||||||||||||    ||    
T  32744172 ttttcctcggtagttaactgcagccggtt---ccataattcggcagttaactaccgaggggcatttgggtaaattactagtgtttctcagccaatggcaa 32744268  T
Q  580 tgtgtcaacaacaatactc 598  Q
    |||||||||||||||||||    
T  32744269 tgtgtcaacaacaatactc 32744287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 478 - 593
Target Start/End: Complemental strand, 4002795 - 4002680
Alignment:
Q  478 cattttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaacta 577  Q
    ||||||||||| ||||||| ||||||||| |||   ||| ||||||| |||| |||||||||  ||||||| |||||||||||||  | ||||||||| |    
T  4002795 cattttcctcggcagttaactgcagccggatttctaaaacttcggcaattaaatgccgaggggcatttgagcaatttactcgtgtggcacagccaaacca 4002696  T
Q  578 aatgtgtcaacaacaa 593  Q
    ||||||  ||||||||    
T  4002695 aatgtgggaacaacaa 4002680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 480 - 601
Target Start/End: Complemental strand, 11269361 - 11269243
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||||||||||   | | |||||| ||| |||||||||||||  ||||  |||| ||||| ||||||||||||||||   ||    
T  11269361 ttttcctcggcagttaactgcagccggtt---ccataattcgacaggtaactgccgaggggcattttggtaaattactagtgtttctcagccaaagataa 11269265  T
Q  580 tgtgtcaacaacaatactcaaa 601  Q
    ||||||||||||||| ||||||    
T  11269264 tgtgtcaacaacaattctcaaa 11269243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 516 - 594
Target Start/End: Complemental strand, 16851143 - 16851065
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||||||||||||||  |||||||||| ||||||||||  |  ||||||||||||||||  |||||||||    
T  16851143 aattcggcagttaactgccgaggggcatttgagtaaattactcgtgtggcatagccaaactaaatgtgggaacaacaat 16851065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 19842557 - 19842443
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||  ||||||| |||||||| || |   ||| ||||||||||||||||||| ||  |||||| ||||||||| ||||||||||| ||||| |||    
T  19842557 ttttcctcagcagttaactgcagccgattctttaaaatttcggcagttaactgccgaagggcatttgaataatttacttgtgtttctcagacaaaccaaa 19842458  T
Q  580 tgtgtcaacaacaat 594  Q
    ||||| |||| ||||    
T  19842457 tgtgtgaacagcaat 19842443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 516 - 562
Target Start/End: Complemental strand, 26245352 - 26245306
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgt 562  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  26245352 aattcggcagttaactgccgaggggtatttgagtaatttactcgtgt 26245306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 518 - 583
Target Start/End: Complemental strand, 19988474 - 19988409
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtg 583  Q
    ||||||||||||||||||||||  |||||||||||||||||||||  | ||||||||| |||||||    
T  19988474 ttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaaccaaatgtg 19988409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 594
Target Start/End: Original strand, 24703436 - 24703549
Alignment:
Q  481 tttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaat 580  Q
    |||||||| ||||||| |||| |||  |||   ||| ||||| ||||||||||||||||  |||||||||||||||||||||||||||| |||  | |||    
T  24703436 tttcctcggcagttaactgcatccgaatttctaaaacttcggtagttaactgccgaggggcatttgagtaatttactcgtgtttctcagtcaatatcaat 24703535  T
Q  581 gtgtcaacaacaat 594  Q
    ||||| ||| ||||    
T  24703536 gtgtctacatcaat 24703549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 519 - 575
Target Start/End: Complemental strand, 13743307 - 13743251
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaac 575  Q
    ||||||||||||||||||||| |||||| |||||||||  |||||||||||||||||    
T  13743307 tcggcagttaactgccgaggggtatttgggtaatttacatgtgtttctcagccaaac 13743251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 514 - 602
Target Start/End: Original strand, 42760263 - 42760351
Alignment:
Q  514 aaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaaaa 602  Q
    ||||||||| ||||||| | ||| ||  ||||  |||| |||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  42760263 aaaattcggtagttaaccggcgaagggcatttaggtaaattactcgtgtgtctcagccaaaccaaatgtgtcaacaacaattctcaaaa 42760351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 491 - 594
Target Start/End: Complemental strand, 16861171 - 16861068
Alignment:
Q  491 agttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaa 590  Q
    |||||| |||| ||||||||   ||| |||| |||||||||| ||||||  ||||  |||| |||||||||| |||||||||||| |||||||||||||     
T  16861171 agttaactgcatccggttttctaaaacttcgacagttaactgtcgaggggcatttaggtaaattactcgtgtgtctcagccaaaccaaatgtgtcaacag 16861072  T
Q  591 caat 594  Q
    ||||    
T  16861071 caat 16861068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 480 - 600
Target Start/End: Original strand, 11095107 - 11095224
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||| |||||| |    |||||||||| |||||||||||||  |||||||||||||||||||||  |  |||||||| |||    
T  11095107 ttttcctcggcagttaactgcagtcggtttcat---aattcggcagctaactgccgaggggcatttgagtaatttactcgtgtggcatagccaaaccaaa 11095203  T
Q  580 tgtgtcaacaacaatactcaa 600  Q
     |||  ||||||||| |||||    
T  11095204 cgtgggaacaacaattctcaa 11095224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 518 - 583
Target Start/End: Complemental strand, 3493603 - 3493538
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtg 583  Q
    ||||||||||||||| ||||| | |||| ||||||||||||||||  | |||||||||||||||||    
T  3493603 ttcggcagttaactgtcgaggaacatttaagtaatttactcgtgtggcacagccaaactaaatgtg 3493538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 518 - 583
Target Start/End: Complemental strand, 3497297 - 3497232
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtg 583  Q
    ||||||||||||||| ||||| | |||| ||||||||||||||||  | |||||||||||||||||    
T  3497297 ttcggcagttaactgtcgaggaacatttaagtaatttactcgtgtggcacagccaaactaaatgtg 3497232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 519 - 575
Target Start/End: Original strand, 9429908 - 9429965
Alignment:
Q  519 tcggcagttaactgccgaggga-tatttgagtaatttactcgtgtttctcagccaaac 575  Q
    |||||||||||||||||||||  |||||| |||||||||| |||||||||||||||||    
T  9429908 tcggcagttaactgccgagggggtatttgcgtaatttacttgtgtttctcagccaaac 9429965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 480 - 603
Target Start/End: Complemental strand, 42148345 - 42148225
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||| |||||| |||||||||||   | | ||||||||||||||||||||||| |||||| ||||| || || ||||  | |||||||   | |    
T  42148345 ttttcctcgatagttaactgcagccggtt---ccataattcggcagttaactgccgaggaatattttagtaaattgctagtgtgacacagccaatgcata 42148249  T
Q  580 tgtgtcaacaacaatactcaaaag 603  Q
    |||||||||||| || ||||||||    
T  42148248 tgtgtcaacaacgattctcaaaag 42148225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 480 - 600
Target Start/End: Original strand, 11249544 - 11249664
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||||||   |||   ||| ||| ||||||||||||||| || ||||||||||||||||||||||  | |||||||| ||||    
T  11249544 ttttcctcggcagttaactgcagccatatttctaaaacttcagcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagccaaagtaaa 11249643  T
Q  580 tgtgtcaacaacaatactcaa 600  Q
     |||  |||| |||| |||||    
T  11249644 agtgggaacagcaattctcaa 11249664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 522 - 594
Target Start/End: Original strand, 19750075 - 19750147
Alignment:
Q  522 gcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||||||||||| ||||||||||||||||||| ||  | ||||||||| ||| |||  |||||||||    
T  19750075 gcagttaactgccgaggggtatttgagtaatttactcgcgtggcacagccaaaccaaaagtgggaacaacaat 19750147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 524 - 600
Target Start/End: Original strand, 52515052 - 52515128
Alignment:
Q  524 agttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaa 600  Q
    |||||||||||||||   ||||| |||| | |||||||||||||||||||  || |||||||||||||||| |||||    
T  52515052 agttaactgccgaggagcatttgggtaaatcactcgtgtttctcagccaatgtatatgtgtcaacaacaattctcaa 52515128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 525 - 600
Target Start/End: Original strand, 30294919 - 30294994
Alignment:
Q  525 gttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaa 600  Q
    ||||||||||||   |||||| | ||| ||||||||||||||||||||||| ||| |||| || ||||||||||||    
T  30294919 gttaactgccgaaaaatatttaaataaattactcgtgtttctcagccaaaccaaacgtgtgaaaaacaatactcaa 30294994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 594
Target Start/End: Complemental strand, 11380421 - 11380379
Alignment:
Q  552 tttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||||||||||||| ||| ||||||||||||||||||    
T  11380421 tttactcgtgtttctcagcctaaccaaatgtgtcaacaacaat 11380379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 523 - 573
Target Start/End: Complemental strand, 24700731 - 24700681
Alignment:
Q  523 cagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaa 573  Q
    |||||||||||||| |   ||||||||||||||||||||||||||||||||    
T  24700731 cagttaactgccgatgagcatttgagtaatttactcgtgtttctcagccaa 24700681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 516 - 594
Target Start/End: Complemental strand, 31977676 - 31977598
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||| |||||||||||||| |   ||||| |||| |||||||||||||||||||||   | ||||||||||||||||    
T  31977676 aattcgacagttaactgccgatgagcatttgggtaaattactcgtgtttctcagccaatacatatgtgtcaacaacaat 31977598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 516 - 590
Target Start/End: Complemental strand, 40872091 - 40872017
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaa 590  Q
    |||||||||||||||| ||||||| |||||  ||  |||||  ||||||||| ||||||| ||||||||||||||    
T  40872091 aattcggcagttaactaccgaggggtattttcgtcttttacatgtgtttctctgccaaaccaaatgtgtcaacaa 40872017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 518 - 583
Target Start/End: Complemental strand, 2645470 - 2645405
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtg 583  Q
    ||||||||||||||||||||||| ||||| |||||||||| ||||  |  |||||||| |||||||    
T  2645470 ttcggcagttaactgccgagggacatttgtgtaatttacttgtgtggcatagccaaaccaaatgtg 2645405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 518 - 558
Target Start/End: Original strand, 7942063 - 7942103
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactc 558  Q
    |||||||||||||||||||||  ||||||||||||||||||    
T  7942063 ttcggcagttaactgccgaggagtatttgagtaatttactc 7942103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 519 - 599
Target Start/End: Original strand, 13747777 - 13747857
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    ||||||||||||||||||||  ||||||  ||||||||  |||||| |||||||||| | |||||  ||||||||| ||||    
T  13747777 tcggcagttaactgccgaggagtatttggataatttacatgtgtttatcagccaaacaacatgtgggaacaacaattctca 13747857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 480 - 539
Target Start/End: Original strand, 600564 - 600623
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgaggg 539  Q
    ||||||||||||||||| ||| ||||| ||| | ||| ||||||||||||||| ||||||    
T  600564 ttttcctcgacagttaactgcggccggatttccaaaacttcggcagttaactgtcgaggg 600623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 598
Target Start/End: Original strand, 3112856 - 3112935
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactc 598  Q
    ||||||||||||| |||| ||| |||| | || |||||  |||||| |||||||||| | |||||| |||||||||||||    
T  3112856 tcggcagttaactaccgaaggacattttaatattttacatgtgtttttcagccaaacaacatgtgtgaacaacaatactc 3112935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 518 - 569
Target Start/End: Complemental strand, 4274101 - 4274050
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcag 569  Q
    ||||||||||||||||||||||  |||||| ||||||||  |||||||||||    
T  4274101 ttcggcagttaactgccgaggggcatttgaataatttacatgtgtttctcag 4274050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 594
Target Start/End: Original strand, 6928790 - 6928861
Alignment:
Q  523 cagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||  || |||| |||||  ||| |||||||||||||||||||| ||| | ||||||||||||||||    
T  6928790 cagttaaccaccaaggggtattttggtattttactcgtgtttctcagcctaacaagatgtgtcaacaacaat 6928861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 480 - 575
Target Start/End: Original strand, 32593132 - 32593227
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaac 575  Q
    |||||||||  |||||| ||||||||||| |   ||| |||| ||||||||||||||  ||||||||  ||| |||||| ||||||||||| ||||    
T  32593132 ttttcctcggaagttaactgcagccggttctttaaaatttcgacagttaactgccgaaagatatttggataaattactcctgtttctcagctaaac 32593227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 34712286 - 34712171
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggat-atttgagtaatttactcgtgtttctcagccaaactaa 578  Q
    |||||||||  |||||| |||| ||||||| |   ||||| ||||| |||||||||||||   |||||||||||||||  |||||||||||||  |  ||    
T  34712286 ttttcctcggtagttaactgcatccggtttcaaacaaatttggcagctaactgccgagggggcatttgagtaatttacatgtgtttctcagccctatgaa 34712187  T
Q  579 atgtgtcaacaacaat 594  Q
    ||||||| ||||||||    
T  34712186 atgtgtcgacaacaat 34712171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 34712779 - 34712894
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggat-atttgagtaatttactcgtgtttctcagccaaactaa 578  Q
    |||||||||  |||||| |||||||||||  |   |||||| |||| |||||||||||||   |||||||||||||||  |||||||||||||  |  ||    
T  34712779 ttttcctcgggagttaactgcagccggttccaaacaaattcagcagctaactgccgagggggcatttgagtaatttacatgtgtttctcagccctatgaa 34712878  T
Q  579 atgtgtcaacaacaat 594  Q
    ||||||||||| ||||    
T  34712879 atgtgtcaacagcaat 34712894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 599
Target Start/End: Complemental strand, 41802938 - 41802891
Alignment:
Q  552 tttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    ||||||||||||||||||||| |  |||||||||||||||||| ||||    
T  41802938 tttactcgtgtttctcagccatatgaaatgtgtcaacaacaattctca 41802891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 480 - 539
Target Start/End: Complemental strand, 48246465 - 48246406
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgaggg 539  Q
    ||||||||||||||||| ||||||||| |||   ||| ||| ||||||||||||||||||    
T  48246465 ttttcctcgacagttaactgcagccggatttctaaaacttcagcagttaactgccgaggg 48246406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 491 - 594
Target Start/End: Complemental strand, 49265830 - 49265727
Alignment:
Q  491 agttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaa 590  Q
    |||||| | |||||||||||   ||| ||||||| |||||||  |||||  |||| ||||| ||||| || | ||||| |||||| ||||||||||||||    
T  49265830 agttaactacagccggttttctaaaacttcggcaattaactgatgaggggcatttaagtaaattacttgtatgtctcaaccaaaccaaatgtgtcaacaa 49265731  T
Q  591 caat 594  Q
    ||||    
T  49265730 caat 49265727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 480 - 539
Target Start/End: Complemental strand, 55385190 - 55385131
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgaggg 539  Q
    ||||||||| ||||||| ||||||||| |||   ||| ||||||||||||||||||||||    
T  55385190 ttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaggg 55385131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 548 - 598
Target Start/End: Original strand, 7839588 - 7839638
Alignment:
Q  548 gtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactc 598  Q
    |||| |||||||||| |||||||||||| |||||||| |||| ||||||||    
T  7839588 gtaaattactcgtgtatctcagccaaaccaaatgtgtgaacagcaatactc 7839638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 480 - 558
Target Start/End: Complemental strand, 10492080 - 10492002
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactc 558  Q
    ||||||||| ||||||| ||||||||  |||   ||| |||| ||||||||| |||| ||| |||||||||||||||||    
T  10492080 ttttcctcgtcagttaactgcagccgtatttctaaaacttcgacagttaactaccgatggacatttgagtaatttactc 10492002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 518 - 588
Target Start/End: Original strand, 17568018 - 17568088
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaac 588  Q
    |||| |||||||||||||||||| ||||   ||| |||| ||||| ||||||||||||  |||||||||||    
T  17568018 ttcgacagttaactgccgagggacatttagataaattacccgtgtgtctcagccaaacctaatgtgtcaac 17568088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 548 - 594
Target Start/End: Original strand, 41615876 - 41615922
Alignment:
Q  548 gtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||| |||||||||| ||||||| |||| ||||||||||||||||||    
T  41615876 gtaaattactcgtgtgtctcagctaaaccaaatgtgtcaacaacaat 41615922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 45075399 - 45075284
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| | |||||| || |   ||| |||||||||||||| ||||||   |||||| ||||||    |||||||||| |||||| |||    
T  45075399 ttttcctcggcagttaactccagccgattctttaaaatttcggcagttaactaccgaggagcatttgaataattt----gtgtttctcaaccaaaccaaa 45075304  T
Q  580 tgtgtcaacaacaatactca 599  Q
    |||||||||| | |||||||    
T  45075303 tgtgtcaacagcgatactca 45075284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 516 - 594
Target Start/End: Original strand, 55282868 - 55282946
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||||||| | | ||| |||||| ||| |||||||||||||||| ||||   | || |||||||||||||    
T  55282868 aattcggcagttaactgtcaatggacatttgaataaattactcgtgtttctcaaccaatgcatatatgtcaacaacaat 55282946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 481 - 538
Target Start/End: Complemental strand, 596836 - 596779
Alignment:
Q  481 tttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagg 538  Q
    |||||||| ||||||| ||||||||  ||||| ||| |||||||||||| ||||||||    
T  596836 tttcctcggcagttaactgcagccgaatttacaaaacttcggcagttaattgccgagg 596779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 480 - 536
Target Start/End: Original strand, 2647719 - 2647776
Alignment:
Q  480 ttttcctcgacagttaattgcagccgg-ttttacgaaaattcggcagttaactgccga 536  Q
    ||||||||| ||||||| ||||||||| |||| | ||| |||||||||||||||||||    
T  2647719 ttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccga 2647776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 549
Target Start/End: Complemental strand, 19750091 - 19750026
Alignment:
Q  484 cctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagt 549  Q
    ||||| ||||||| ||||||||  |||   ||| |||||||||||||||||||||| |||||||||    
T  19750091 cctcggcagttaactgcagccgtatttctaaaatttcggcagttaactgccgaggggtatttgagt 19750026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 553 - 598
Target Start/End: Complemental strand, 26493636 - 26493591
Alignment:
Q  553 ttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactc 598  Q
    ||||||||||||||||||||||  |||| ||| |||||||||||||    
T  26493636 ttactcgtgtttctcagccaaatcaaatctgtgaacaacaatactc 26493591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 526 - 599
Target Start/End: Original strand, 50604486 - 50604559
Alignment:
Q  526 ttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    |||||||| || || ||||| |||| |||||  |||||| |||||||||| | ||||||||||| |||||||||    
T  50604486 ttaactgctgaagggtattttagtattttacatgtgtttttcagccaaacaacatgtgtcaacagcaatactca 50604559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 480 - 536
Target Start/End: Complemental strand, 54389848 - 54389791
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaatt-cggcagttaactgccga 536  Q
    ||||||||| ||||||| ||||||||| |||  ||||||| |||||||||||||||||    
T  54389848 ttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccga 54389791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 519 - 594
Target Start/End: Original strand, 653 - 728
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  653 tcggcagttaactgccgaggggcatttgagtaatttactcgtgtttctcagccaaactcaatgtgtcaacaacaat 728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 63; Significance: 6e-27; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 480 - 598
Target Start/End: Complemental strand, 54618 - 54500
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||||| | | ||| || | ||||||| |||||||||| |||||||||||||||| |||||||| ||| ||||||||    
T  54618 ttttcctcggcagttaactgcagccggttcttcaaaattttgacagttaattgccgagggacatttgagtaatttacttgtgtttctaagctaaactaaa 54519  T
Q  580 tgtgtcaacaacaatactc 598  Q
    |||||||||| ||||||||    
T  54518 tgtgtcaacagcaatactc 54500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 60; Significance: 4e-25; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 480 - 598
Target Start/End: Complemental strand, 65371 - 65252
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatattt-gagtaatttactcgtgtttctcagccaaactaa 578  Q
    ||||||||||||||||| |||||||| || |   ||| |||||||||||||||||||  || |||| ||||||||||||| |||||||||||||||| ||    
T  65371 ttttcctcgacagttaactgcagccgattcttttaaatttcggcagttaactgccgaatgacattttgagtaatttactcatgtttctcagccaaacgaa 65272  T
Q  579 atgtgtcaacaacaatactc 598  Q
    |||||| |||||||||||||    
T  65271 atgtgtaaacaacaatactc 65252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 516 - 600
Target Start/End: Original strand, 65456 - 65540
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaa 600  Q
    |||||||||||||| ||||||| |  ||||| |||| ||||| ||||||||||||||||   ||| ||||||||||||| |||||    
T  65456 aattcggcagttaaatgccgagtggcatttgggtaaattactagtgtttctcagccaaaggtaatatgtcaacaacaattctcaa 65540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 27936 - 28050
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||| | |||||| |||| |||||||    ||||||||||| ||||||| | |||| |||||| |||||||||||||||||||||||||||||| |    
T  27936 ttttcctccatagttaactgcaaccggtttctttaaaattcggcaattaactgtctaggggtatttgggtaatttactcgtgtttctcagccaaactaca 28035  T
Q  580 tgtgtcaacaacaat 594  Q
    |||||||||||||||    
T  28036 tgtgtcaacaacaat 28050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 2e-20; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 519 - 598
Target Start/End: Complemental strand, 35096685 - 35096606
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactc 598  Q
    ||||||||||||| |||| ||  ||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||    
T  35096685 tcggcagttaactaccgaagggcatttgagtaatttactcgtgtttctcaaccaaaccaaatgtgtaaacaacaatactc 35096606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 480 - 594
Target Start/End: Original strand, 15888820 - 15888933
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||||||||||||   ||| ||||| ||||||||||||| || | |||| |||| ||||||||||||||||||||||| |||    
T  15888820 ttttcctcggcagttaactgcagccggttttctaaaacttcggtagttaactgccgaagg-tgtttgggtaaattactcgtgtttctcagccaaaccaaa 15888918  T
Q  580 tgtgtcaacaacaat 594  Q
    ||||| |||| ||||    
T  15888919 tgtgtaaacatcaat 15888933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 480 - 600
Target Start/End: Complemental strand, 25554758 - 25554638
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||| | ||||||| ||||||||  |||   ||| |||||||||||||||||||||| ||||||||||||||||||||||  | |||||||| ||||    
T  25554758 ttttcctaggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccaaagtaaa 25554659  T
Q  580 tgtgtcaacaacaatactcaa 600  Q
     |||  ||||||||| |||||    
T  25554658 agtgggaacaacaattctcaa 25554638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 2109570 - 2109451
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| ||||||||  |||   ||| |||||||||||||||||||| | ||||||||||||||||||||||  | ||||||||| |||    
T  2109570 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgagaggtatttgagtaatttactcgtgtggcacagccaaacaaaa 2109471  T
Q  580 tgtgtcaacaacaatactca 599  Q
     |||  ||||||||| ||||    
T  2109470 agtgggaacaacaattctca 2109451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 480 - 601
Target Start/End: Original strand, 13164280 - 13164398
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||||||||  |||||| |||||||||||| |    ||||||| ||||||||||||||||  |||||||||||||||||||||  |  ||||||||||||    
T  13164280 ttttcctcgggagttaactgcagccggtttcat---aattcggtagttaactgccgaggggcatttgagtaatttactcgtgtggcatagccaaactaaa 13164376  T
Q  580 tgtgtcaacaacaatactcaaa 601  Q
    ||||  ||||||||| ||||||    
T  13164377 tgtgggaacaacaattctcaaa 13164398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 388 - 472
Target Start/End: Original strand, 28976154 - 28976239
Alignment:
Q  388 tggtgggtgagagatgagagagaatggttagggaagatagga-taaaaaattcagtgtagagagtgcatgataagattatgttctt 472  Q
    |||| |||||||||||||||||||| |||||||||||||| |  ||||||||||| ||||||| ||||||||||||  ||||||||    
T  28976154 tggtaggtgagagatgagagagaatagttagggaagatagtacaaaaaaattcagcgtagagaatgcatgataagagcatgttctt 28976239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 516 - 600
Target Start/End: Original strand, 456097 - 456181
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaa 600  Q
    ||||||||||||||||||||||||  ||||| |||| |||||||||||||||||||||   | ||||||||||| |||| |||||    
T  456097 aattcggcagttaactgccgaggggcatttgggtaaattactcgtgtttctcagccaatgcatatgtgtcaacagcaattctcaa 456181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 518 - 594
Target Start/End: Original strand, 14124776 - 14124852
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||| ||||||| || ||||||  ||||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  14124776 ttcgacagttaattgtcgaggggcatttgagtaatttactcgtgtttcttagccaaatcaaatgtgtcaacaacaat 14124852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 518 - 602
Target Start/End: Complemental strand, 24719956 - 24719872
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaaaa 602  Q
    ||||||||||||||||||| ||| ||||  |||| ||| |||||| |||||||| ||  |||||||||||||||||| |||||||    
T  24719956 ttcggcagttaactgccgaaggacatttaggtaaattagtcgtgtgtctcagcctaatcaaatgtgtcaacaacaatcctcaaaa 24719872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 514 - 594
Target Start/End: Original strand, 32034420 - 32034500
Alignment:
Q  514 aaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||| | |||||||||||||| || ||||||| ||| ||||||||||||||  ||||||| ||||||||||||| ||||    
T  32034420 aaaatttgtcagttaactgccgaagggtatttgaataaattactcgtgtttcttggccaaaccaaatgtgtcaacatcaat 32034500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 516 - 594
Target Start/End: Complemental strand, 14834724 - 14834648
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||||||||||| |  |||||| |||| |||||||||||||||||||||  |  ||||||||||||||||    
T  14834724 aattcggcagttaactgccgatgattatttgggtaaattactcgtgtttctcagccaa--tgcatgtgtcaacaacaat 14834648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 516 - 594
Target Start/End: Complemental strand, 3177573 - 3177495
Alignment:
Q  516 aattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||| |||||||||||||| | |||||||  ||  |||||  ||||||||||||||||| ||||||||||||||||||    
T  3177573 aattcagcagttaactgccgcgagatatttttgttttttacatgtgtttctcagccaaaccaaatgtgtcaacaacaat 3177495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 480 - 598
Target Start/End: Complemental strand, 35177656 - 35177538
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    |||| |||||||||||| |||||||| || |   ||| ||| |||||||||||| || || ||||||  ||| ||| ||||||||||| || ||||||||    
T  35177656 tttttctcgacagttaactgcagccgattctttaaaatttcagcagttaactgcagaagggtatttggataaattattcgtgtttctcggcgaaactaaa 35177557  T
Q  580 tgtgtcaacaacaatactc 598  Q
     |||| |||||||||||||    
T  35177556 cgtgttaacaacaatactc 35177538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 480 - 599
Target Start/End: Complemental strand, 117311 - 117195
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| ||||||| |||||||||||   | | ||||||||||||||||||||||||  ||||| |||| |||||  ||||||| ||||||    ||    
T  117311 ttttcctcggcagttaactgcagccggtt---ccataattcggcagttaactgccgaggggcatttgggtaaattactattgtttcttagccaatggcaa 117215  T
Q  580 tgtgtcaacaacaatactca 599  Q
    |||||||||| |||| ||||    
T  117214 tgtgtcaacatcaattctca 117195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 594
Target Start/End: Original strand, 3385056 - 3385136
Alignment:
Q  514 aaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||| ||||||| |||||| |||  |||||  |||| ||||||||||||||||||||||| | | ||||||||||||||    
T  3385056 aaaatttggcagttgactgccaaggagtatttaggtaaattactcgtgtttctcagccaaaccacacgtgtcaacaacaat 3385136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 594
Target Start/End: Complemental strand, 28249899 - 28249823
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||| ||||||| |||||   |||||||||||||||||||||  | ||||||||| |||||||| |||||||||    
T  28249899 ttcggcatttaactgtcgaggagcatttgagtaatttactcgtgtggcacagccaaaccaaatgtgtaaacaacaat 28249823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 480 - 583
Target Start/End: Original strand, 6760892 - 6760995
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaa 579  Q
    ||||||||| || |||| ||||||||  |||   ||| |||||||||||||| || ||||  |||||||||||||||||||||  | ||||||||| |||    
T  6760892 ttttcctcggcaattaactgcagccgtatttctaaaacttcggcagttaactaccaaggggcatttgagtaatttactcgtgtggcacagccaaaccaaa 6760991  T
Q  580 tgtg 583  Q
    ||||    
T  6760992 tgtg 6760995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 519 - 562
Target Start/End: Complemental strand, 13158449 - 13158406
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgt 562  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||    
T  13158449 tcggcagttaactgccgaggggtatttgaataatttactcgtgt 13158406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 519 - 562
Target Start/End: Complemental strand, 13163305 - 13163262
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgt 562  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||    
T  13163305 tcggcagttaactgccgaggggtatttgaataatttactcgtgt 13163262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 480 - 594
Target Start/End: Complemental strand, 13382682 - 13382567
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaa-ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaa 578  Q
    ||||||||| ||||||| ||| ||||||||    |||| |||| ||||| ||| |||| ||| |||||||||||||||||||||  | ||||||||| ||    
T  13382682 ttttcctcggcagttaactgccgccggtttcctaaaaacttcgtcagtttactaccgaaggacatttgagtaatttactcgtgtggcacagccaaaccaa 13382583  T
Q  579 atgtgtcaacaacaat 594  Q
    |||||  |||||||||    
T  13382582 atgtgggaacaacaat 13382567  T

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Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 525 - 594
Target Start/End: Original strand, 9391201 - 9391271
Alignment:
Q  525 gttaactgccgaggga-tatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||| ||||||  |||||| |||| ||||| |||||||||||||||||||||||||||  |||||||    
T  9391201 gttaactgacgagggggtatttgggtaaattactagtgtttctcagccaaactaaatgtgtcttcaacaat 9391271  T

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Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 517 - 567
Target Start/End: Complemental strand, 15545746 - 15545696
Alignment:
Q  517 attcggcagttaactgccgagggatatttgagtaatttactcgtgtttctc 567  Q
    ||||| |||||||||||||||||| |||||| |||||||||||| ||||||    
T  15545746 attcgacagttaactgccgagggacatttgaataatttactcgtatttctc 15545696  T

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Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 524 - 601
Target Start/End: Complemental strand, 6760057 - 6759980
Alignment:
Q  524 agttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaaa 601  Q
    |||| |||||||||||  ||||| |||| ||||| ||||||||||||||||   |||||||||||| |||| ||||||    
T  6760057 agtttactgccgaggggcatttgggtaaattactagtgtttctcagccaaaggtaatgtgtcaacagcaattctcaaa 6759980  T

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Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 8383855 - 8383798
Alignment:
Q  52 actgattttaaatttgaattttgcagtttgacatgaaattggtctctcaatccctttc 109  Q
    ||||||||| |||| ||||||||| ||||||||| |||||| ||| ||||||||||||    
T  8383855 actgattttcaattcgaattttgctgtttgacataaaattgatctttcaatccctttc 8383798  T

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Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 553 - 598
Target Start/End: Complemental strand, 11157690 - 11157645
Alignment:
Q  553 ttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactc 598  Q
    |||||||| |||||||||||||| |||||||| |||||||||||||    
T  11157690 ttactcgtatttctcagccaaaccaaatgtgtgaacaacaatactc 11157645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 479 - 603
Target Start/End: Complemental strand, 17596995 - 17596870
Alignment:
Q  479 attttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgaggga-tatttgagtaatttactcgtgtttctcagccaaacta 577  Q
    |||||||||| ||||||| ||||||||||||||       ||| ||||||||||| |||||  |||||  ||| |||||| |||||||||||||||||      
T  17596995 attttcctcggcagttaactgcagccggttttatttttcctcgacagttaactgcagagggggtattttggtattttactggtgtttctcagccaaacat 17596896  T
Q  578 aatgtgtcaacaacaatactcaaaag 603  Q
     ||||||||||| |||||||| ||||    
T  17596895 gatgtgtcaacagcaatactctaaag 17596870  T

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Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 537 - 594
Target Start/End: Original strand, 32643444 - 32643501
Alignment:
Q  537 gggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||  ||| |||||||||||||||||||| ||| | ||||||||||||||||    
T  32643444 gggatattttggtattttactcgtgtttctcagcctaacaagatgtgtcaacaacaat 32643501  T

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Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 524 - 600
Target Start/End: Complemental strand, 455478 - 455402
Alignment:
Q  524 agttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaa 600  Q
    |||| |||||||| ||  ||||| |||| |||||||||||||||||||||   | |||||||||||||||| |||||    
T  455478 agtttactgccgaagggcatttgggtaaattactcgtgtttctcagccaatgcatatgtgtcaacaacaattctcaa 455402  T

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Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 559 - 594
Target Start/End: Original strand, 3178149 - 3178184
Alignment:
Q  559 gtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    |||||||||| |||||||||||||||||||||||||    
T  3178149 gtgtttctcaaccaaactaaatgtgtcaacaacaat 3178184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 480 - 536
Target Start/End: Complemental strand, 6204880 - 6204823
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaatt-cggcagttaactgccga 536  Q
    ||||||||| ||||||| ||||||||| |||  ||||||| |||||||||||||||||    
T  6204880 ttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccga 6204823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 480 - 536
Target Start/End: Complemental strand, 22305161 - 22305104
Alignment:
Q  480 ttttcctcgacagttaattgcagccgg-ttttacgaaaattcggcagttaactgccga 536  Q
    ||||||||| ||||||| ||||||||| |||| | ||| |||||||||||||||||||    
T  22305161 ttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccga 22305104  T

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Target: scaffold0016 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 480 - 575
Target Start/End: Original strand, 69241 - 69336
Alignment:
Q  480 ttttcctcgacagttaattgcagccggttttacgaaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaac 575  Q
    ||||| ||||||||||| |||| |||  |||   ||| |||||||||||||||||||||| ||||||||||||||||||||||  | |||||||||    
T  69241 ttttcttcgacagttaactgcatccgtatttctaaaacttcggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccaaac 69336  T

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Target: scaffold0019 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 518 - 567
Target Start/End: Complemental strand, 127516 - 127467
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctc 567  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  127516 ttcggcagttaactaccgatggatatttgagtaatttactcgtgtttctc 127467  T

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Target: scaffold0217 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 542 - 600
Target Start/End: Complemental strand, 8793 - 8735
Alignment:
Q  542 atttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaa 600  Q
    |||| |||||||||||||||||||||| |||||| |||||||| |||| ||||||||||    
T  8793 attttagtaatttactcgtgtttctcaaccaaaccaaatgtgtaaacagcaatactcaa 8735  T

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Target: scaffold0038 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 594
Target Start/End: Complemental strand, 50061 - 49985
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||| ||||||| |||||   |||||||||||||||||||||  | ||||||||| |||||||| |||||||||    
T  50061 ttcggcatttaactgtcgaggagcatttgagtaatttactcgtgtggcacagccaaaccaaatgtgtaaacaacaat 49985  T

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Target: scaffold0513 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 521 - 575
Target Start/End: Complemental strand, 8211 - 8157
Alignment:
Q  521 ggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaac 575  Q
    ||||||||||||||||||  |||||| |||||||||| ||| |||||||||||||    
T  8211 ggcagttaactgccgaggagtatttgggtaatttacttgtgattctcagccaaac 8157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 518 - 600
Target Start/End: Original strand, 11512 - 11594
Alignment:
Q  518 ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactcaa 600  Q
    ||||||||||||||||||| ||  ||||  |||||||||||||||  | ||||||||| |||||||  ||||||||| |||||    
T  11512 ttcggcagttaactgccgaagggcatttaggtaatttactcgtgtggcacagccaaaccaaatgtgggaacaacaattctcaa 11594  T

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Target: scaffold0101 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 480 - 536
Target Start/End: Original strand, 36554 - 36611
Alignment:
Q  480 ttttcctcgacagttaattgcagccgg-ttttacgaaaattcggcagttaactgccga 536  Q
    ||||||||| ||||||||||||||||| |||| | ||| |||||||||||||||||||    
T  36554 ttttcctcggcagttaattgcagccggatttttcaaaatttcggcagttaactgccga 36611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 523 - 599
Target Start/End: Original strand, 1676 - 1751
Alignment:
Q  523 cagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaatactca 599  Q
    ||||||||||||||  ||||||| | ||| |||||||||||||| |||||||| |||||||| |||| |||| ||||    
T  1676 cagttaactgccgaaagatatttaaataaattactcgtgtttct-agccaaaccaaatgtgtaaacatcaattctca 1751  T

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Target: scaffold0341 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 519 - 594
Target Start/End: Original strand, 18116 - 18191
Alignment:
Q  519 tcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgtgtcaacaacaat 594  Q
    ||||||||||||||||||||||||||||  ||||||||  |||||| ||| ||  |  ||||||||||||| ||||    
T  18116 tcggcagttaactgccgagggatatttggataatttacatgtgtttttcaaccctatcaaatgtgtcaacagcaat 18191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 594
Target Start/End: Complemental strand, 10701 - 10591
Alignment:
Q  484 cctcgacagttaattgcagccggttttacgaaaa-ttcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagccaaactaaatgt 582  Q
    ||||| ||||||| ||| |||||||| || |||| |||||||||||| |||||| ||  |||| ||||||||||||||||  | || |||||| ||||||    
T  10701 cctcggcagttaactgccgccggttt-actaaaacttcggcagttaattgccgaagggcatttaagtaatttactcgtgtgacacaaccaaaccaaatgt 10603  T
Q  583 gtcaacaacaat 594  Q
    |  |||||||||    
T  10602 gggaacaacaat 10591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 514 - 571
Target Start/End: Original strand, 18953 - 19010
Alignment:
Q  514 aaaattcggcagttaactgccgagggatatttgagtaatttactcgtgtttctcagcc 571  Q
    ||||||||| |||||||||||||| | |||||  |||| ||||| |||||||||||||    
T  18953 aaaattcggtagttaactgccgagaggtatttaggtaaattactggtgtttctcagcc 19010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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