View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8782_low_14 (Length: 239)
Name: NF8782_low_14
Description: NF8782
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8782_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 41404575 - 41404355
Alignment:
| Q |
1 |
ttggaagtccacacaacttgtataacgaaccaaaaatactccctcaatttttattagagaagtcttttgaagatgcattcattccttctcatagtttatc |
100 |
Q |
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|||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41404575 |
ttggaagtccacacaatttgtataaccaaccaaaaatactccctcaatttttattagagaagtcttttgaagatgcattcattccttctcatagtttatc |
41404476 |
T |
|
| Q |
101 |
tgaccagagacagttcacgtaaacatatatcacaatcacaaccttaaatcttcacgaacatcacattggacctttggcatgcacatatttcatatggttt |
200 |
Q |
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|
||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41404475 |
tgaccagagacggttcacgtaaacatataccacaatcacaaccttaaatcttcacgaacatcacattggacctttggcatgcacatatttcatatggttt |
41404376 |
T |
|
| Q |
201 |
ctgttcaatcgacttagaagg |
221 |
Q |
| |
|
||||||||||||||||||||| |
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| T |
41404375 |
ctgttcaatcgacttagaagg |
41404355 |
T |
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