View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8783_high_4 (Length: 319)

Name: NF8783_high_4
Description: NF8783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8783_high_4
NF8783_high_4
[»] chr7 (17 HSPs)
chr7 (11-307)||(5312430-5312747)
chr7 (224-309)||(18496716-18496801)
chr7 (224-308)||(1074605-1074689)
chr7 (224-309)||(21545705-21545790)
chr7 (224-308)||(29544672-29544756)
chr7 (238-294)||(12358655-12358711)
chr7 (224-308)||(20017106-20017189)
chr7 (224-308)||(23125053-23125137)
chr7 (224-299)||(20470688-20470763)
chr7 (224-308)||(7494849-7494932)
chr7 (235-307)||(9801764-9801835)
chr7 (234-293)||(14649663-14649722)
chr7 (273-308)||(20461575-20461610)
chr7 (46-90)||(1074889-1074934)
chr7 (18-74)||(4829239-4829296)
chr7 (243-308)||(9761313-9761377)
chr7 (235-308)||(20446355-20446427)
[»] chr4 (21 HSPs)
chr4 (224-308)||(7024097-7024181)
chr4 (224-308)||(5676352-5676436)
chr4 (22-123)||(7023878-7023979)
chr4 (224-300)||(31859779-31859855)
chr4 (224-308)||(34864174-34864257)
chr4 (16-92)||(29437815-29437892)
chr4 (224-289)||(33519201-33519266)
chr4 (257-308)||(9288362-9288413)
chr4 (238-305)||(22119776-22119843)
chr4 (239-308)||(13064578-13064647)
chr4 (239-308)||(15192356-15192424)
chr4 (235-307)||(17187326-17187398)
chr4 (224-308)||(27302930-27303013)
chr4 (232-299)||(25315118-25315184)
chr4 (253-308)||(29437623-29437678)
chr4 (238-308)||(19601951-19602020)
chr4 (235-308)||(1695736-1695808)
chr4 (235-308)||(21077385-21077458)
chr4 (235-299)||(5906652-5906716)
chr4 (224-308)||(17026575-17026658)
chr4 (235-299)||(47024655-47024718)
[»] chr8 (18 HSPs)
chr8 (235-308)||(13583409-13583482)
chr8 (224-308)||(28291979-28292063)
chr8 (130-218)||(27097551-27097639)
chr8 (224-308)||(16052155-16052239)
chr8 (236-308)||(11437571-11437644)
chr8 (224-308)||(5153910-5153994)
chr8 (224-268)||(5570018-5570062)
chr8 (224-308)||(11310134-11310217)
chr8 (224-308)||(30850978-30851062)
chr8 (224-306)||(6888071-6888153)
chr8 (238-299)||(28859131-28859192)
chr8 (224-308)||(24120376-24120460)
chr8 (224-307)||(13081813-13081895)
chr8 (235-297)||(24696745-24696807)
chr8 (240-305)||(29291925-29291990)
chr8 (224-308)||(14424691-14424775)
chr8 (224-264)||(27097680-27097720)
chr8 (224-308)||(28901228-28901311)
[»] chr3 (10 HSPs)
chr3 (235-308)||(19219100-19219173)
chr3 (224-308)||(16970614-16970698)
chr3 (235-308)||(11474999-11475072)
chr3 (235-307)||(10341940-10342012)
chr3 (237-299)||(13911419-13911480)
chr3 (224-299)||(19263782-19263860)
chr3 (235-299)||(23908160-23908224)
chr3 (235-299)||(26418881-26418945)
chr3 (238-308)||(21829025-21829095)
chr3 (259-308)||(26387758-26387807)
[»] chr1 (21 HSPs)
chr1 (224-308)||(26854198-26854282)
chr1 (223-308)||(18300880-18300965)
chr1 (224-307)||(25373899-25373982)
chr1 (224-308)||(11769872-11769956)
chr1 (224-308)||(26102209-26102293)
chr1 (224-308)||(30675637-30675720)
chr1 (225-299)||(25727788-25727862)
chr1 (225-299)||(25736196-25736270)
chr1 (224-305)||(50047330-50047411)
chr1 (224-300)||(52271123-52271199)
chr1 (224-287)||(25494367-25494430)
chr1 (224-308)||(19257684-19257766)
chr1 (234-307)||(31313705-31313778)
chr1 (11-82)||(15298510-15298581)
chr1 (224-288)||(21548820-21548884)
chr1 (16-82)||(52270873-52270940)
chr1 (234-308)||(27461069-27461143)
chr1 (224-300)||(23519647-23519722)
chr1 (239-299)||(25730464-25730524)
chr1 (224-308)||(30781913-30781996)
chr1 (234-297)||(31319499-31319563)
[»] chr5 (15 HSPs)
chr5 (225-308)||(11274209-11274292)
chr5 (224-300)||(24841914-24841989)
chr5 (225-308)||(30072268-30072351)
chr5 (223-307)||(7742747-7742831)
chr5 (224-308)||(16634199-16634283)
chr5 (224-308)||(26329948-26330031)
chr5 (235-306)||(19331664-19331735)
chr5 (234-308)||(26070626-26070700)
chr5 (224-308)||(16622555-16622638)
chr5 (237-308)||(20694792-20694863)
chr5 (16-77)||(23157429-23157492)
chr5 (224-308)||(17027680-17027763)
chr5 (224-308)||(18452690-18452774)
chr5 (224-308)||(22229957-22230040)
chr5 (224-308)||(25594570-25594654)
[»] chr6 (8 HSPs)
chr6 (235-305)||(33638394-33638464)
chr6 (235-300)||(26499736-26499801)
chr6 (238-299)||(30355478-30355539)
chr6 (226-290)||(24618053-24618117)
chr6 (135-198)||(17198575-17198638)
chr6 (235-308)||(9396496-9396569)
chr6 (15-72)||(15382087-15382144)
chr6 (224-268)||(17860327-17860371)
[»] chr2 (15 HSPs)
chr2 (234-300)||(17152314-17152380)
chr2 (224-268)||(18236181-18236225)
chr2 (224-308)||(21505017-21505101)
chr2 (235-305)||(30998927-30998996)
chr2 (224-294)||(31262163-31262233)
chr2 (223-307)||(14921916-14922000)
chr2 (12-63)||(18235964-18236015)
chr2 (234-300)||(18117142-18117208)
chr2 (258-308)||(19541189-19541239)
chr2 (224-278)||(31274138-31274192)
chr2 (224-289)||(18818873-18818938)
chr2 (240-308)||(15454433-15454501)
chr2 (240-308)||(17415058-17415125)
chr2 (224-308)||(22511098-22511182)
chr2 (224-308)||(27417141-27417225)
[»] scaffold0171 (2 HSPs)
scaffold0171 (223-308)||(6348-6432)
scaffold0171 (235-299)||(21559-21623)
[»] scaffold0282 (1 HSPs)
scaffold0282 (224-308)||(22492-22575)
[»] scaffold0188 (1 HSPs)
scaffold0188 (224-308)||(26833-26917)
[»] scaffold0386 (1 HSPs)
scaffold0386 (225-293)||(11678-11746)
[»] scaffold0650 (1 HSPs)
scaffold0650 (224-308)||(5648-5731)
[»] scaffold0190 (1 HSPs)
scaffold0190 (224-308)||(11576-11660)
[»] scaffold0011 (1 HSPs)
scaffold0011 (224-268)||(228065-228109)


Alignment Details
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 11 - 307
Target Start/End: Original strand, 5312430 - 5312747
Alignment:
Q  11 acatcattacttaggggttaagaggtgaaaatttgggttttccactaaaaacaacttggaaaacaagcaaaagtcacctcctgtctgtcaaccaagtgtg 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5312430 acatcattacttaggggttaagaggtgaaaatttgggttttccactaaaaacaacttggaaaacaagcaaaagtcacctcctgtctgtcaaccaagtgtg 5312529  T
Q  111 gggcgcatgaagtgaggcgcatggggcatcaaggaatgttgtctcatgcgc---------------------aggggcgcatgaggcagtgccttcaatg 189  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||                     |||||||||||| |||||||||||||||    
T  5312530 gggcgcatgaagtgaggcgcatggggcatcaaggaatgttgtctcatgcgcagcggcgcatggcccatgcataggggcgcatgaagcagtgccttcaatg 5312629  T
Q  190 cgaattttgcattttcatcccttttttgatccctttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatcct 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5312630 cgaattttgcattttcatcccttttttgatccctttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatcct 5312729  T
Q  290 tgatccttcacttgatgt 307  Q
    ||||||||||||||||||    
T  5312730 tgatccttcacttgatgt 5312747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 224 - 309
Target Start/End: Complemental strand, 18496801 - 18496716
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtcc 309  Q
    |||||||||||||||||| ||||||| ||  ||||||||||||||  | ||||||| ||||||||||||||||||||| |||||||    
T  18496801 ttttcttcatcttgtattttcttcaacaacattctaagaaccattattcttcaatcttcatatccttgatccttcactcgatgtcc 18496716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 1074689 - 1074605
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||||||||||||||||||| || ||| |||||||||||  | ||||||  ||||||||||||||||| ||||||||||    
T  1074689 ttttcttcatcttgtattgtcttcaacaaccttttaagaaccattggtcttcaattttcatatccttgatcctttacttgatgtc 1074605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 224 - 309
Target Start/End: Original strand, 21545705 - 21545790
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtcc 309  Q
    |||||||||  || ||||||||||||| |  |||||||||||||| || ||||||| |||||||||||||||||||| ||||||||    
T  21545705 ttttcttcactttttattgtcttcaaatactttctaagaaccattgatcttcaatcttcatatccttgatccttcacgtgatgtcc 21545790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 29544756 - 29544672
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  |||||||||||||||||| |||||||||| |||| || ||||||| ||||||| |||||||||||  |||||||    
T  29544756 ttttcttcactttgtattgtcttcaaaaaccttctaagaatcattgatcttcaatcttcatatctttgatccttcatgtgatgtc 29544672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 294
Target Start/End: Original strand, 12358655 - 12358711
Alignment:
Q  238 tattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatc 294  Q
    ||||||||||||||| ||||||||||||||| || ||||||| ||||||||||||||    
T  12358655 tattgtcttcaaaaaccttctaagaaccattgatcttcaatcttcatatccttgatc 12358711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 20017189 - 20017106
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  ||||||||||||||| || ||||||||||||||| | |||||||| |||||| ||| ||||||||| |||||||    
T  20017189 ttttcttcactttgtattgtcttcaagaaccttctaagaaccattga-gttcaatcttcatatgcttaatccttcacatgatgtc 20017106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 23125137 - 23125053
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  |||||||||||| || |||||| ||||||||||| |  ||||||| ||||||||| |||||||||| |||||||    
T  23125137 ttttcttcactttgtattgtctttaagaatcttataagaaccattgaacttcaatcttcatatcctcgatccttcacatgatgtc 23125053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 299
Target Start/End: Original strand, 20470688 - 20470763
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 299  Q
    |||||||||| ||||||||||||||| || ||||||||||||||| |  ||||||  ||| |||||||||| ||||    
T  20470688 ttttcttcattttgtattgtcttcaagaaccttctaagaaccattgaacttcaatattcacatccttgatcgttca 20470763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 7494932 - 7494849
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  ||||||||||||||   | ||||||||||||||| |  ||||||| |||||||||||||||||||  |||||||    
T  7494932 ttttcttcactttgtattgtcttcatggaccttctaagaaccattaac-ttcaatcttcatatccttgatccttcatgtgatgtc 7494849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 307
Target Start/End: Original strand, 9801764 - 9801835
Alignment:
Q  235 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgt 307  Q
    ||||||| |||| ||||| ||| ||||||||||| |  ||||||| |||||||||||||||||||| ||||||    
T  9801764 ttgtattttctttaaaaaccttttaagaaccattgac-ttcaatcttcatatccttgatccttcacatgatgt 9801835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 14649722 - 14649663
Alignment:
Q  234 cttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgat 293  Q
    ||||||||||||||||||| ||||||| ||||||| || |||| |  |||||||||||||    
T  14649722 cttgtattgtcttcaaaaaccttctaataaccattgatcttcattattcatatccttgat 14649663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 273 - 308
Target Start/End: Original strand, 20461575 - 20461610
Alignment:
Q  273 ttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    ||||||| ||||||||||||||||||||||||||||    
T  20461575 ttcaatcttcatatccttgatccttcacttgatgtc 20461610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 1074934 - 1074889
Alignment:
Q  46 ggttttccact-aaaaacaacttggaaaacaagcaaaagtcacctc 90  Q
    ||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  1074934 ggttttccactgaaaaacatcttggaaaacaagcaaaagacacctc 1074889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 4829296 - 4829239
Alignment:
Q  18 tacttaggggttaagag-gtgaaaatttgggttttccactaaaaacaacttggaaaac 74  Q
    ||||||||||||||||| ||||||||   | |||||||| ||||||||||||||||||    
T  4829296 tacttaggggttaagagagtgaaaatagagtttttccaccaaaaacaacttggaaaac 4829239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 308
Target Start/End: Original strand, 9761313 - 9761377
Alignment:
Q  243 tcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||| ||||| ||| ||||||||||| |  ||||||| |||||||||||||||||||| |||||||    
T  9761313 tctttaaaaaccttttaagaaccattgac-ttcaatcttcatatccttgatccttcacgtgatgtc 9761377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 308
Target Start/End: Complemental strand, 20446427 - 20446355
Alignment:
Q  235 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    ||||||||||||||| || |||||||||||| || || |||||| ||   ||| ||||||||||||||||||||    
T  20446427 ttgtattgtcttcaacaaccttctaagaacccttgatcttcaattct-tcatctttgatccttcacttgatgtc 20446355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 7024097 - 7024181
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||  | ||||||| ||||||| |||||||||||| |||||||    
T  7024097 ttttcttcatcttgtattatcttcaagaatcttctaagaaccattggtcttcaatcttcatatctttgatccttcacgtgatgtc 7024181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 5676436 - 5676352
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||| | ||||| | | |||||||||||||||||  |||||||    
T  5676436 ttttcttcatcttgtattgtcttcaaaaaccttctaagaatcatttgtattcaaacttaatatccttgatccttcatgtgatgtc 5676352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 22 - 123
Target Start/End: Original strand, 7023878 - 7023979
Alignment:
Q  22 taggggttaagaggtgaaaatttgggttttccactaaaaacaacttggaaaacaagcaaaagtcacctcctgtctgtcaaccaagtgtggggcgcatgaa 121  Q
    |||||||| |||| ||||| || || |||||||||||||| | ||||||||||||||||||| ||||||||| | |||  ||| ||| |||| |||||||    
T  7023878 taggggtttagagatgaaatttaggattttccactaaaaatagcttggaaaacaagcaaaaggcacctcctggccgtctgccatgtgcggggtgcatgaa 7023977  T
Q  122 gt 123  Q
    ||    
T  7023978 gt 7023979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 300
Target Start/End: Original strand, 31859779 - 31859855
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcac 300  Q
    |||||||||  |||||||||||||||| | ||||||||||||||| || ||||||  ||||||||| ||||||||||    
T  31859779 ttttcttcactttgtattgtcttcaaataccttctaagaaccattgatcttcaatattcatatcctcgatccttcac 31859855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 34864174 - 34864257
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||| |  |||||||  |||||| |||||||||||| |||||||    
T  34864174 ttttcttcattttgtattgtctacaaaaaccttctaagaaccattga-cttcaatctccatatctttgatccttcacgtgatgtc 34864257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 29437892 - 29437815
Alignment:
Q  16 attacttaggggttaagag-gtgaaaatttgggttttccactaaaaacaacttggaaaacaagcaaaagtcacctcct 92  Q
    ||||||||||||||||||| ||||||||  || |||||||| ||||||  ||||||||||||||||| ||||| ||||    
T  29437892 attacttaggggttaagagagtgaaaatagggtttttccaccaaaaacggcttggaaaacaagcaaacgtcacttcct 29437815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 33519266 - 33519201
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatcct 289  Q
    ||||||||| ||||||||||||||||| | ||||||||||| ||| || ||||||| |||||||||    
T  33519266 ttttcttcaacttgtattgtcttcaaagaccttctaagaacgattgatcttcaatcgtcatatcct 33519201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 308
Target Start/End: Complemental strand, 9288413 - 9288362
Alignment:
Q  257 ctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    ||||||||||||  | ||||||| ||||||||||||||||||||||||||||    
T  9288413 ctaagaaccattggtcttcaatcttcatatccttgatccttcacttgatgtc 9288362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 305
Target Start/End: Complemental strand, 22119843 - 22119776
Alignment:
Q  238 tattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgat 305  Q
    ||||||| ||||||| | ||||||||||||| || ||||||  |||||||||| ||||||||||||||    
T  22119843 tattgtcctcaaaaaccctctaagaaccattgatcttcaatattcatatccttaatccttcacttgat 22119776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 13064647 - 13064578
Alignment:
Q  239 attgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||||| | | ||||||||||||| |  ||||||| || ||||||||||||||||| |||||||    
T  13064647 attgtcttcaaataccctctaagaaccattgaacttcaatcgtcttatccttgatccttcacgtgatgtc 13064578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 15192424 - 15192356
Alignment:
Q  239 attgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    ||||||||||| || |||||||||||||||  | ||||||  |||||||||||||||||||| |||||||    
T  15192424 attgtcttcaacaaccttctaagaaccattggtcttcaatt-tcatatccttgatccttcacgtgatgtc 15192356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 17187398 - 17187326
Alignment:
Q  235 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgt 307  Q
    |||||||||||||||| | ||||||||||||| | |  ||||||| |||||||||  ||| ||||||||||||    
T  17187398 ttgtattgtcttcaaataacttctaagaaccactgaacttcaatcttcatatcctcaatcattcacttgatgt 17187326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 27303013 - 27302930
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  || || |||||||||||| |||||||||||| || |||||||||  |||||||||||||| | ||| |||||||    
T  27303013 ttttcttcactttataatgtcttcaaaaaccttctaagaacccttaatgttcaat-ttcatatccttgatcttgcacgtgatgtc 27302930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 232 - 299
Target Start/End: Original strand, 25315118 - 25315184
Alignment:
Q  232 atcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 299  Q
    |||||||||||||||||| ||  || |||||||||||||| || |||  |||||||||||||||||||    
T  25315118 atcttgtattgtcttcaacaacattttaagaaccatttatctttaat-ttcatatccttgatccttca 25315184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 29437678 - 29437623
Alignment:
Q  253 tcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||||||||| |  ||||||| ||||||||| |||||||||| |||||||    
T  29437678 tcttctaagaaccattgaacttcaatcttcatatcctcgatccttcacgtgatgtc 29437623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 308
Target Start/End: Complemental strand, 19602020 - 19601951
Alignment:
Q  238 tattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    ||||||||||||||| ||| ||||||||| || | ||||||| ||||||||| |||| ||||| |||||||    
T  19602020 tattgtcttcaaaaaccttttaagaacca-ttgtcttcaatcatcatatcctcgatctttcacgtgatgtc 19601951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 308
Target Start/End: Original strand, 1695736 - 1695808
Alignment:
Q  235 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    ||||||||||||||| || ||||||||||   ||||| ||||||| ||||||| |||||| ||||| |||||||    
T  1695736 ttgtattgtcttcaacaaccttctaagaatgttttat-ttcaatcttcatatcgttgatcattcacatgatgtc 1695808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 308
Target Start/End: Complemental strand, 21077458 - 21077385
Alignment:
Q  235 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    ||||||||||||| |  | ||||||||||||||| || ||||||||||||| | | |||||| |||||| ||||    
T  21077458 ttgtattgtcttcgattaccttctaagaaccattgatattcaatcctcataacttcgatcctccacttggtgtc 21077385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 5906652 - 5906716
Alignment:
Q  235 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 299  Q
    ||||||| |||||||||| ||||||||||||||| || || |||| | |||| || |||||||||    
T  5906652 ttgtattatcttcaaaaaccttctaagaaccattaatcttaaatcttaatattctagatccttca 5906716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 17026575 - 17026658
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  ||||||||||||||||||  || ||||||||| |||  || ||| ||||||| ||||||||||||  |||||||    
T  17026575 ttttcttcactttgtattgtcttcaaaaactttttaagaacca-ttaacttaaattctcatatacttgatccttcatgtgatgtc 17026658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 47024655 - 47024718
Alignment:
Q  235 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 299  Q
    ||||| ||| |||||||| ||||||||||||||| |  ||||||| |||| ||||||||||||||    
T  47024655 ttgtactgttttcaaaaaccttctaagaaccattga-cttcaatcttcatgtccttgatccttca 47024718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 235 - 308
Target Start/End: Original strand, 13583409 - 13583482
Alignment:
Q  235 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||||||||| ||||||||||||||||| |  ||||||| ||||||||| ||||||||||||||||||    
T  13583409 ttgtattgtcttcaaatatcttctaagaaccattgaacttcaatcatcatatcctcgatccttcacttgatgtc 13583482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 28291979 - 28292063
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||| |||||||||||||||| | ||||||||||||||| || ||||||| |||||||||  ||||||||  |||||||    
T  28291979 ttttcttcattttgtattgtcttcaaagaccttctaagaaccattaatcttcaatcttcatatcctcaatccttcatgtgatgtc 28292063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 130 - 218
Target Start/End: Original strand, 27097551 - 27097639
Alignment:
Q  130 catggggcatcaaggaatgttgtctcatgcgcaggggcgcatgaggcagtgccttcaatgcgaattttgc-attttcatcccttttttga 218  Q
    |||||||||  |||||||||||||||||||||| ||| ||||||||||||||||  | ||||||||||||  |||||||| |||||||||    
T  27097551 catggggcagaaaggaatgttgtctcatgcgca-gggtgcatgaggcagtgcctctagtgcgaattttgcggttttcatctcttttttga 27097639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 16052155 - 16052239
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||| |||||||||||||||||| |||||||||| ||||  | || |||| |||||||||| ||||||||  |||||||    
T  16052155 ttttcttcattttgtattgtcttcaaaaaccttctaagaatcattggtctttaatcttcatatcctttatccttcatgtgatgtc 16052239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 308
Target Start/End: Complemental strand, 11437644 - 11437571
Alignment:
Q  236 tgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatcc-ttcacttgatgtc 308  Q
    |||||||||||||||  |||||||||||||||| |  ||||||  ||||||||||||||| |||||||||||||    
T  11437644 tgtattgtcttcaaatgtcttctaagaaccattgaacttcaattttcatatccttgatcctttcacttgatgtc 11437571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 5153994 - 5153910
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||| ||||| || ||||||||||||||| |||| || || |||| || ||||||| ||||||||| |||||||||||| |||||    
T  5153994 ttttattcatgttatattgtcttcaaaaaccttccaataatcattgatcttcaatcttcatatcctcgatccttcactttatgtc 5153910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 268
Target Start/End: Original strand, 5570018 - 5570062
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatt 268  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||    
T  5570018 ttttcttcatcttgtattgtctttaaaaagcttctaagaaccatt 5570062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 11310134 - 11310217
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  ||||||||| |||||||| |||||||||| |||| |  || |||| |||||||||||||||||||| |||||||    
T  11310134 ttttcttcactttgtattgttttcaaaaaccttctaagaatcattgac-ttaaatcttcatatccttgatccttcacatgatgtc 11310217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 30850978 - 30851062
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  ||||||| | |||||| |  ||||||||||| || || ||||||| ||||||||||||||||||||| ||||||    
T  30850978 ttttcttcactttgtattatattcaaagacattctaagaaccgttgatcttcaatcttcatatccttgatccttcactagatgtc 30851062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 306
Target Start/End: Original strand, 6888071 - 6888153
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatg 306  Q
    ||||||||| ||||||||||||||||| |  || ||||||||||| || ||||||| ||||||||| ||| || ||| |||||    
T  6888071 ttttcttcaacttgtattgtcttcaaagacattttaagaaccattgatcttcaatcttcatatcctcgatactgcacgtgatg 6888153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 299
Target Start/End: Original strand, 28859131 - 28859192
Alignment:
Q  238 tattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 299  Q
    ||||||||||||||| | ||||||||||||| || || |||| | |||||||||||||||||    
T  28859131 tattgtcttcaaaaaccatctaagaaccattgatctttaatcttgatatccttgatccttca 28859192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 24120460 - 24120376
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    ||||||||||||| |||| ||||| |||| |||||||||| ||||  | |||||   | |||||||||||||||||| |||||||    
T  24120460 ttttcttcatcttttattatcttcgaaaaccttctaagaaacattggtattcaaaattaatatccttgatccttcacatgatgtc 24120376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 307
Target Start/End: Original strand, 13081813 - 13081895
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgt 307  Q
    |||||||||| ||||||||||||||| || |||||||||||| || || ||||||  |  |||| |||||||||||| ||||||    
T  13081813 ttttcttcattttgtattgtcttcaacaaccttctaagaacccttgatcttcaattat-ttatctttgatccttcacatgatgt 13081895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 24696807 - 24696745
Alignment:
Q  235 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatcctt 297  Q
    ||||||| |||||||||| ||||||||||| | |  | ||||||| |||||||||||||||||    
T  24696807 ttgtattttcttcaaaaaccttctaagaacaagtggtcttcaatcttcatatccttgatcctt 24696745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 305
Target Start/End: Complemental strand, 29291990 - 29291925
Alignment:
Q  240 ttgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgat 305  Q
    ||||||||||| | ||||||||||||||| || ||||||  ||||||||| ||| |||||| ||||    
T  29291990 ttgtcttcaaagaccttctaagaaccattgatcttcaatattcatatcctcgattcttcacgtgat 29291925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 14424691 - 14424775
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  ||| ||||| |||||||| ||||||||||||||| || ||||||| || |||| |  ||||||| |||| ||||    
T  14424691 ttttcttcacattgaattgtgttcaaaaaccttctaagaaccattgatcttcaatcttcttatcatatatccttcccttgttgtc 14424775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 27097680 - 27097720
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaac 264  Q
    ||||||||| ||||||||||||||||| | |||||||||||    
T  27097680 ttttcttcaacttgtattgtcttcaaagaccttctaagaac 27097720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 28901228 - 28901311
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  |||||||||||||| ||| ||| ||||||||||| |  ||||||| ||||||| ||||| |||||  |||||||    
T  28901228 ttttcttcactttgtattgtcttcagaaaccttataagaaccattga-attcaatcttcatatcattgattcttcatatgatgtc 28901311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 235 - 308
Target Start/End: Original strand, 19219100 - 19219173
Alignment:
Q  235 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||||||||||| ||||||||||||||| || ||||||| |||||||||||||||||||  |||||||    
T  19219100 ttgtattgtcttcaaaaaccttctaagaaccattgatcttcaatcttcatatccttgatccttcatgtgatgtc 19219173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 16970698 - 16970614
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||||||||||| |||||||||| |||||||||||| ||  | ||||| | |||||||||||||||||||| |||||||    
T  16970698 ttttcttcatcttgtattttcttcaaaaaccttctaagaaccgttggtcttcaaacttcatatccttgatccttcacatgatgtc 16970614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 235 - 308
Target Start/End: Complemental strand, 11475072 - 11474999
Alignment:
Q  235 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||||||||| |||||||||||||||||||| || |||||||||||| | |||||||||  |||||||    
T  11475072 ttgtattgtcttcaaatatcttctaagaaccatttatcttgaatcctcatatcttcgatccttcatgtgatgtc 11474999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 10342012 - 10341940
Alignment:
Q  235 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgt 307  Q
    |||||||||||||||||| ||||||||||||| | || ||||||| |  ||||||| ||||||||||||||||    
T  10342012 ttgtattgtcttcaaaaaccttctaagaaccactgatcttcaatctttctatccttaatccttcacttgatgt 10341940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 299
Target Start/End: Complemental strand, 13911480 - 13911419
Alignment:
Q  237 gtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 299  Q
    |||||||||| |||| ||||||||||||||||||  || |||| |||||||||||||||||||    
T  13911480 gtattgtcttgaaaattcttctaagaaccattta-atttaatcttcatatccttgatccttca 13911419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 299
Target Start/End: Original strand, 19263782 - 19263860
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaat---cttctaagaaccatttatgttcaatcctcatatccttgatccttca 299  Q
    |||||||||  |||||||||||| |||||    |||||| |||||||| || ||||||| |||||||||||||||||||    
T  19263782 ttttcttcactttgtattgtcttaaaaaaaaaccttctatgaaccattgatcttcaatcttcatatccttgatccttca 19263860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 23908160 - 23908224
Alignment:
Q  235 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 299  Q
    ||||||||||||||||||  |||||| ||||||| || || |||| |||||| ||||||||||||    
T  23908160 ttgtattgtcttcaaaaactttctaaaaaccattgatcttaaatcttcatattcttgatccttca 23908224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 26418945 - 26418881
Alignment:
Q  235 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 299  Q
    ||||||| |||| ||||| ||||||||||||||  || || |||| |||||||||||||||||||    
T  26418945 ttgtattttctttaaaaaccttctaagaaccatcaatctttaatcttcatatccttgatccttca 26418881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 308
Target Start/End: Original strand, 21829025 - 21829095
Alignment:
Q  238 tattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    ||||||||||||| | |||| | |||||||| || ||||||| ||||||||||||| |||||  |||||||    
T  21829025 tattgtcttcaaagaccttcgatgaaccattgatcttcaatcttcatatccttgatacttcatgtgatgtc 21829095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 308
Target Start/End: Original strand, 26387758 - 26387807
Alignment:
Q  259 aagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||| || ||||||  ||||||| ||||||||||||||||||||    
T  26387758 aagaaccattaatcttcaatattcatatctttgatccttcacttgatgtc 26387807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 26854198 - 26854282
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  |||||||||||||||| ||||||||||||||||| |  ||||||| ||||||| |||||||||||||| |||||    
T  26854198 ttttcttcactttgtattgtcttcaaatatcttctaagaaccattgaacttcaatcttcatatcattgatccttcacttaatgtc 26854282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 18300880 - 18300965
Alignment:
Q  223 tttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    ||||||||||   ||||||||||||||||| |||||||||||||||  | || |||| |||||||||||||||||||| |||||||    
T  18300880 tttttcttcactctgtattgtcttcaaaaaccttctaagaaccattggtatttaatcttcatatccttgatccttcacgtgatgtc 18300965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 224 - 307
Target Start/End: Complemental strand, 25373982 - 25373899
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgt 307  Q
    ||||||||||||||||||||||| || || |||||||||||||||  | || |||| ||||||||| ||||||||| |||||||    
T  25373982 ttttcttcatcttgtattgtcttaaacaaccttctaagaaccattggtctttaatcttcatatcctggatccttcaattgatgt 25373899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 11769872 - 11769956
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  |||||||||||||||||| |||||||||||||||  | ||||||| ||||||| |||||| ||||  |||||||    
T  11769872 ttttcttcactttgtattgtcttcaaaaaccttctaagaaccattggtcttcaatcttcatatctttgatcattcatgtgatgtc 11769956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 26102293 - 26102209
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    ||||| ||| ||||||||||||||||||| ||||||| || |||| || |||| || |||||||||||||| ||||| |||||||    
T  26102293 ttttcctcaacttgtattgtcttcaaaaaccttctaaaaatcattgatcttcattcttcatatccttgatcattcacgtgatgtc 26102209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 30675720 - 30675637
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  ||||||| |||||||||| ||||||||||||||| || ||||||| ||| || ||||||||||||| |||||||    
T  30675720 ttttcttcactttgtattatcttcaaaaaccttctaagaaccattgat-ttcaatcttcacattcttgatccttcacatgatgtc 30675637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 299
Target Start/End: Original strand, 25727788 - 25727862
Alignment:
Q  225 tttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 299  Q
    ||||||||  ||| |||||||||||||| |||| |||||||||| || ||||||| |||||||||| ||||||||    
T  25727788 tttcttcactttggattgtcttcaaaaaccttccaagaaccattgatcttcaatcttcatatccttaatccttca 25727862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 299
Target Start/End: Original strand, 25736196 - 25736270
Alignment:
Q  225 tttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 299  Q
    ||||||||  ||| |||||||||||||| |||| |||||||||| || ||||||| |||||||||| ||||||||    
T  25736196 tttcttcactttggattgtcttcaaaaaccttccaagaaccattgatcttcaatcttcatatccttaatccttca 25736270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 305
Target Start/End: Complemental strand, 50047411 - 50047330
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgat 305  Q
    |||||||||| ||||||||||||||| || ||| |||| |||||| || ||||||  ||||| |||||||||||||| ||||    
T  50047411 ttttcttcattttgtattgtcttcaataaccttttaagtaccattgatcttcaatattcatacccttgatccttcacgtgat 50047330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 300
Target Start/End: Original strand, 52271123 - 52271199
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcac 300  Q
    |||||||||  |||||||||||||||| | |||||||| |||||| |  ||||||| ||||||||| ||||||||||    
T  52271123 ttttcttcactttgtattgtcttcaaataccttctaagtaccattgaacttcaatcttcatatcctcgatccttcac 52271199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 287
Target Start/End: Original strand, 25494367 - 25494430
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatc 287  Q
    |||||||||  |||||||||||||||||| |||||||||||||||  | ||||||| |||||||    
T  25494367 ttttcttcactttgtattgtcttcaaaaaccttctaagaaccattggtcttcaatcttcatatc 25494430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 19257684 - 19257766
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  |||||||||||||||| | |||||||||||  || |||||||||| ||||||||| |||| ||||  |||||||    
T  19257684 ttttcttcactttgtattgtcttcaaagaccttctaagaac--ttgatgttcaatcttcatatcctcgatctttcatgtgatgtc 19257766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 234 - 307
Target Start/End: Complemental strand, 31313778 - 31313705
Alignment:
Q  234 cttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgt 307  Q
    ||||||||||||||||||| ||| |||||| |||| || |||| || |||||| ||| ||||||||| ||||||    
T  31313778 cttgtattgtcttcaaaaaccttataagaatcattgatcttcattcttcatattcttaatccttcacgtgatgt 31313705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 15298510 - 15298581
Alignment:
Q  11 acatcattacttaggggttaagaggtg-aaaatttgggttttccactaaaaacaacttggaaaacaagcaaaa 82  Q
    ||||||||||||||||||||||||  | ||||| ||||||||| ||  ||||||||||| |||||||||||||    
T  15298510 acatcattacttaggggttaagagaagaaaaatatgggttttcaac-caaaacaacttgaaaaacaagcaaaa 15298581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 288
Target Start/End: Complemental strand, 21548884 - 21548820
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatcc 288  Q
    |||| |||| |||||||| ||||||||  ||||||||||||||||||  ||||||| ||||||||    
T  21548884 tttttttcaacttgtattatcttcaaatgtcttctaagaaccatttagcttcaatcttcatatcc 21548820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 52270873 - 52270940
Alignment:
Q  16 attacttaggggttaagag-gtgaaaatttgggttttccactaaaaacaacttggaaaacaagcaaaa 82  Q
    ||||||||||||||||||| ||||||||   | |||||||| |||||||||||| |||||||| ||||    
T  52270873 attacttaggggttaagagagtgaaaatagagcttttccaccaaaaacaacttgaaaaacaagaaaaa 52270940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 308
Target Start/End: Original strand, 27461069 - 27461143
Alignment:
Q  234 cttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    ||||||||||||||||||| ||| ||||||||||| || ||||  | ||||||||| |||| ||||  |||||||    
T  27461069 cttgtattgtcttcaaaaaccttttaagaaccattgatcttcatacttcatatcctcgatctttcatgtgatgtc 27461143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 300
Target Start/End: Original strand, 23519647 - 23519722
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcac 300  Q
    |||||||||  || |||||||||||| || |||||||||||||||  | ||||||  |||||| |||||||||||||    
T  23519647 ttttcttcactttctattgtcttcaacaaccttctaagaaccattggtcttcaat-ttcatattcttgatccttcac 23519722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 25730464 - 25730524
Alignment:
Q  239 attgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 299  Q
    |||||| ||||||| |||| |||||||||| || || |||| |||| ||||||||||||||    
T  25730464 attgtcgtcaaaaaccttccaagaaccattgatcttaaatcttcatctccttgatccttca 25730524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 30781996 - 30781913
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  ||||||||||||||| || ||| |||||||| || || |||||| ||   |||||||||||||||| |||||||    
T  30781996 ttttcttcactttgtattgtcttcaacaaccttttaagaacccttgatcttcaattct-tcatccttgatccttcacatgatgtc 30781913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 31319499 - 31319563
Alignment:
Q  234 cttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatc-cttgatcctt 297  Q
    |||| |||||||||||||| ||||||||||||||| || |||| |  ||||||| ||||||||||    
T  31319499 cttgcattgtcttcaaaaaacttctaagaaccattgatcttcattattcatatctcttgatcctt 31319563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 225 - 308
Target Start/End: Original strand, 11274209 - 11274292
Alignment:
Q  225 tttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||| ||||||||||||||||||||| | |||||||||||||||  | ||||||| |||||||||||||||||||  |||||||    
T  11274209 tttcatcatcttgtattgtcttcaaagaccttctaagaaccattggtcttcaatcttcatatccttgatccttcatgtgatgtc 11274292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 300
Target Start/End: Complemental strand, 24841989 - 24841914
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcac 300  Q
    |||||||||| |||| ||||||||||||  ||||||||||||||| |  |||||||| |||||||||||||||||||    
T  24841989 ttttcttcattttgtgttgtcttcaaaatccttctaagaaccattga-cttcaatccacatatccttgatccttcac 24841914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 225 - 308
Target Start/End: Complemental strand, 30072351 - 30072268
Alignment:
Q  225 tttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    ||||||||  |||||||||||| ||||| ||| ||||||||||| || ||||||| ||||||| |||||||||||  |||||||    
T  30072351 tttcttcactttgtattgtctttaaaaaccttttaagaaccattaatcttcaatcttcatatctttgatccttcatgtgatgtc 30072268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 223 - 307
Target Start/End: Original strand, 7742747 - 7742831
Alignment:
Q  223 tttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgt 307  Q
    ||||||||||  |||||||||||||||| | ||||||||||||||| || |||| || ||||||| | ||| |||||| ||||||    
T  7742747 tttttcttcactttgtattgtcttcaaagaccttctaagaaccattgatcttcagtcttcatatcttcgattcttcacgtgatgt 7742831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 16634283 - 16634199
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||| ||||||||||||| |||||||||| |||||||||||||||  | ||||| | ||||||  ||| |||||||| |||||||    
T  16634283 tttttttcatcttgtattttcttcaaaaaccttctaagaaccattggtcttcaaacttcatattattgttccttcacgtgatgtc 16634199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 26329948 - 26330031
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  |||||||||||| ||||| |||||||| |||||| |  ||||||| |||||||||||||||||||  |||||||    
T  26329948 ttttcttcactttgtattgtcttaaaaaaccttctaaggaccattga-cttcaatcttcatatccttgatccttcatgtgatgtc 26330031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 306
Target Start/End: Complemental strand, 19331735 - 19331664
Alignment:
Q  235 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatg 306  Q
    ||||||||||||||||  |||||||| || |||| |  ||||||| ||||||||| ||||||||||||||||    
T  19331735 ttgtattgtcttcaaatgtcttctaaaaatcattgaatttcaatcttcatatcctcgatccttcacttgatg 19331664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 308
Target Start/End: Complemental strand, 26070700 - 26070626
Alignment:
Q  234 cttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||| |||||||||||||| ||| || |||||||  || ||||||| |||||||||||||||||||  |||||||    
T  26070700 cttgcattgtcttcaaaaaccttatacgaaccatagatcttcaatcttcatatccttgatccttcatgtgatgtc 26070626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 16622555 - 16622638
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  |||||||||||||||||  ||||||||||||| |  | ||||||| |||||||||| ||||||||  |||||||    
T  16622555 ttttcttcaatttgtattgtcttcaaaac-cttctaagaaccactggtcttcaatcttcatatccttaatccttcatgtgatgtc 16622638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 20694863 - 20694792
Alignment:
Q  237 gtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||||||| | |||||||||||||||||| ||||||| | || ||| | ||||||||  |||||||    
T  20694863 gtattgtcttcaaataccttctaagaaccatttatcttcaatcttaatgtccgttatccttcatatgatgtc 20694792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 23157429 - 23157492
Alignment:
Q  16 attacttaggggttaagag-gtgaaaatt-tgggttttccactaaaaacaacttggaaaacaag 77  Q
    ||||||||||||||||||| ||||||| | ||||||||||||  |||||| |||||||||||||    
T  23157429 attacttaggggttaagagagtgaaaaatatgggttttccacctaaaacagcttggaaaacaag 23157492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 17027763 - 17027680
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  ||||||||||||||| || |||||||||| || |||  ||||||| ||||||| |||||| | ||| |||||||    
T  17027763 ttttcttcactttgtattgtcttcaagaaccttctaagaagca-ttaacttcaatcttcatatctttgatcttgcacgtgatgtc 17027680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 18452690 - 18452774
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  ||||||||| || ||||| ||| ||||||||||| || ||||||  ||||||| ||||||| |||  |||||||    
T  18452690 ttttcttcactttgtattgttttaaaaaaccttataagaaccattgatcttcaattttcatatctttgatccctcatgtgatgtc 18452774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 22230040 - 22229957
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  | ||||| ||||||| || |||||||||||| || || |||||| | |||||| |||||||||||| |||||||    
T  22230040 ttttcttcacttggtattatcttcaacaaccttctaagaacccttgatcttcaattc-catatctttgatccttcacgtgatgtc 22229957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 25594570 - 25594654
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  ||| ||| ||| |||||| ||||||| | ||||| || ||||||| |||||||||||||| ||||  |||||||    
T  25594570 ttttcttcactttgcattatctacaaaaaccttctaatatccattgatattcaatcttcatatccttgatcgttcatgtgatgtc 25594654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 305
Target Start/End: Original strand, 33638394 - 33638464
Alignment:
Q  235 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgat 305  Q
    ||||||| |||||||| | ||| ||||||||||| || ||||||| |||||||||||||||||||||||||    
T  33638394 ttgtattatcttcaaagaccttataagaaccattgatcttcaatcttcatatccttgatccttcacttgat 33638464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 26499736 - 26499801
Alignment:
Q  235 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcac 300  Q
    |||||||||||||||||| ||||||||||||||| || ||||||| ||||||||| |||| |||||    
T  26499736 ttgtattgtcttcaaaaaccttctaagaaccattgatcttcaatcttcatatcctcgatctttcac 26499801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 299
Target Start/End: Complemental strand, 30355539 - 30355478
Alignment:
Q  238 tattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 299  Q
    ||||||||||||||| ||||||||||| ||| || ||||||| ||||||||| |||||||||    
T  30355539 tattgtcttcaaaaaccttctaagaacgattgatcttcaatcttcatatcctcgatccttca 30355478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 226 - 290
Target Start/End: Complemental strand, 24618117 - 24618053
Alignment:
Q  226 ttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatcctt 290  Q
    ||||||| ||||||||||||| ||| |||||||||||| |||| || ||||||| ||||||||||    
T  24618117 ttcttcaacttgtattgtctttaaagatcttctaagaatcattgatcttcaatcttcatatcctt 24618053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 17198575 - 17198638
Alignment:
Q  135 ggcatcaaggaatgttgtctcatgcgcaggggcgcatgaggcagtgccttcaatgcgaattttg 198  Q
    |||| ||| ||||| |||||||||| ||||||| ||||||||||||||| |||||| |||||||    
T  17198575 ggcagcaatgaatgatgtctcatgcacaggggcacatgaggcagtgcctccaatgcaaattttg 17198638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 308
Target Start/End: Original strand, 9396496 - 9396569
Alignment:
Q  235 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    ||||||||||||||||||  ||||||||| | || || |||| || || | ||||||||||||||| |||||||    
T  9396496 ttgtattgtcttcaaaaaatttctaagaatcgttgatcttcattcttcttgtccttgatccttcacgtgatgtc 9396569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 15382144 - 15382087
Alignment:
Q  15 cattacttaggggttaagaggtgaaaatttgggttttccactaaaaacaacttggaaa 72  Q
    |||||| || ||||||| || | |||||| |||||||||||||||| |||||||||||    
T  15382144 cattacgtatgggttaaaagataaaaattagggttttccactaaaatcaacttggaaa 15382087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 268
Target Start/End: Original strand, 17860327 - 17860371
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatt 268  Q
    |||||||||  ||||||||||| |||||| |||||||||||||||    
T  17860327 ttttcttcactttgtattgtctacaaaaaccttctaagaaccatt 17860371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 17152380 - 17152314
Alignment:
Q  234 cttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcac 300  Q
    |||||||| |||||||||| ||||||||||||||| || |||| || ||||||||||||||||||||    
T  17152380 cttgtattatcttcaaaaaccttctaagaaccattcatattcattcttcatatccttgatccttcac 17152314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 268
Target Start/End: Original strand, 18236181 - 18236225
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatt 268  Q
    |||||||||||||||||||||||||| || |||||||||||||||    
T  18236181 ttttcttcatcttgtattgtcttcaacaaccttctaagaaccatt 18236225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 21505017 - 21505101
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    ||||||||| ||||||||||||||||||| ||||| |||||||||  | ||||| | ||| |||||||||| ||||  |||||||    
T  21505017 ttttcttcaacttgtattgtcttcaaaaaccttctcagaaccattggtcttcaaacttcacatccttgatctttcatgtgatgtc 21505101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 305
Target Start/End: Complemental strand, 30998996 - 30998927
Alignment:
Q  235 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgat 305  Q
    ||||||||||||||| || |||||||||||| || || ||||||   ||||||||||||||||||||||||    
T  30998996 ttgtattgtcttcaacaaccttctaagaacccttgatcttcaatta-catatccttgatccttcacttgat 30998927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 294
Target Start/End: Complemental strand, 31262233 - 31262163
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatc 294  Q
    ||||||||| ||| ||||||||||||| | || |||||||||||| || ||||||| ||||||||| ||||    
T  31262233 ttttcttcaacttatattgtcttcaaagacctactaagaaccattaatcttcaatcttcatatcctcgatc 31262163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 307
Target Start/End: Original strand, 14921916 - 14922000
Alignment:
Q  223 tttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgt 307  Q
    ||||||||||  ||||||||||| || | | ||||||||||||||| |  ||||||| ||||||||| ||| |||||| ||||||    
T  14921916 tttttcttcactttgtattgtctacatataccttctaagaaccattgaacttcaatcttcatatcctcgattcttcacatgatgt 14922000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 18235964 - 18236015
Alignment:
Q  12 catcattacttaggggttaagaggtgaaaatttgggttttccactaaaaaca 63  Q
    ||||||||||||||||||||||| | |||||| || ||||||||||| ||||    
T  18235964 catcattacttaggggttaagagataaaaattaggattttccactaataaca 18236015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 18117208 - 18117142
Alignment:
Q  234 cttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcac 300  Q
    |||||| |||||| |||||| ||||||||||||||||| |||| |  ||||||||| ||| ||||||    
T  18117208 cttgtactgtcttaaaaaatattctaagaaccatttatcttcatttttcatatcctcgatgcttcac 18117142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 308
Target Start/End: Complemental strand, 19541239 - 19541189
Alignment:
Q  258 taagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||||  | ||||||| ||||||||| ||||||||||||||||||    
T  19541239 taagaaccattggtcttcaatcttcatatcctcgatccttcacttgatgtc 19541189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 278
Target Start/End: Complemental strand, 31274192 - 31274138
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaat 278  Q
    ||||||||| ||| ||||||||||||| | ||||||||||||||| || ||||||    
T  31274192 ttttcttcaacttatattgtcttcaaagaccttctaagaaccattaatcttcaat 31274138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 18818938 - 18818873
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatcct 289  Q
    |||||||||  |||||||||||||||| | ||||||||||||||| || |||| |  |||||||||    
T  18818938 ttttcttcactttgtattgtcttcaaagaccttctaagaaccattaatcttcagttttcatatcct 18818873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 15454433 - 15454501
Alignment:
Q  240 ttgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    ||||||| | ||| ||| |||||||||||||| || | || |||||||||||||||||||  |||||||    
T  15454433 ttgtctttagaaaacttttaagaaccatttatctttattcttcatatccttgatccttcatgtgatgtc 15454501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 17415058 - 17415125
Alignment:
Q  240 ttgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    ||||||||||| | || |||||||||||| || ||||||| |||| |||| |||||||||| |||||||    
T  17415058 ttgtcttcaaataactcctaagaaccattgat-ttcaatcttcatgtcctcgatccttcacgtgatgtc 17415125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 22511182 - 22511098
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||| | |||||||||||||||| | |||| ||| |||| |   |||||| |||||||||  ||| |||||||||||||    
T  22511182 ttttcttcatttcgtattgtcttcaaaaaccatctatgaatcattgaacatcaatcttcatatcctcaatctttcacttgatgtc 22511098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 27417141 - 27417225
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  ||||||||| |||||||| ||||| |||||||||  | |||||   ||||||| |||||||||||  |||||||    
T  27417141 ttttcttcactttgtattgttttcaaaaaccttcttagaaccattggtcttcaacattcatatcattgatccttcatgtgatgtc 27417225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 6432 - 6348
Alignment:
Q  223 tttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    ||||||||||  ||||||| ||||||||||||||||| ||||||||  | ||||||  |||||||||||||||||||| |||||||    
T  6432 tttttcttcactttgtattttcttcaaaaatcttctaggaaccattggtcttcaat-ttcatatccttgatccttcacgtgatgtc 6348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 21623 - 21559
Alignment:
Q  235 ttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttca 299  Q
    |||||||||||| ||||| ||||||||||||||| || ||||||| ||||||| |||||||||||    
T  21623 ttgtattgtctttaaaaaccttctaagaaccattgatcttcaatcttcatatcattgatccttca 21559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 22492 - 22575
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    ||||||||| ||||||||||||| ||||| |||||| |||||||| |  |||| || ||||||||||||| |||||| |||||||    
T  22492 ttttcttcaccttgtattgtcttaaaaaaccttctatgaaccattga-cttcattcttcatatccttgattcttcacgtgatgtc 22575  T

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Target: scaffold0188 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 26833 - 26917
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  ||||||||||||||| ||  |||||||||||||| |  ||||||  |||||||||||||| ||||| |||||||    
T  26833 ttttcttcactttgtattgtcttcaagaactttctaagaaccattgaacttcaattttcatatccttgatctttcacgtgatgtc 26917  T

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Target: scaffold0386 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 293
Target Start/End: Original strand, 11678 - 11746
Alignment:
Q  225 tttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgat 293  Q
    |||| |||||||| |||| ||||||||| ||||||||||| |||||| |||| || | |||||||||||    
T  11678 tttcgtcatcttgcattgacttcaaaaaccttctaagaactatttatattcattcttaatatccttgat 11746  T

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Target: scaffold0650 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 5648 - 5731
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  ||||||| |||| ||| | ||||||||||||||| |  ||||||| ||||||||| |||||||||  |||||||    
T  5648 ttttcttcactttgtattttctttaaagaccttctaagaaccattga-attcaatcttcatatcctcgatccttcatgtgatgtc 5731  T

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Target: scaffold0190 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 308
Target Start/End: Original strand, 11576 - 11660
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatttatgttcaatcctcatatccttgatccttcacttgatgtc 308  Q
    |||||||||  |||||||||||||||| | ||| |||||| |||| || ||||||| ||| || ||  |||||| ||||||||||    
T  11576 ttttcttcactttgtattgtcttcaaataccttataagaatcattgatattcaatcttcaaattctcaatccttaacttgatgtc 11660  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 268
Target Start/End: Original strand, 228065 - 228109
Alignment:
Q  224 ttttcttcatcttgtattgtcttcaaaaatcttctaagaaccatt 268  Q
    |||||||||  |||||||||||||||| | |||||||||||||||    
T  228065 ttttcttcactttgtattgtcttcaaataccttctaagaaccatt 228109  T

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