View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8783_low_3 (Length: 426)
Name: NF8783_low_3
Description: NF8783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8783_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 399; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 399; E-Value: 0
Query Start/End: Original strand, 10 - 408
Target Start/End: Original strand, 6032403 - 6032801
Alignment:
| Q |
10 |
agtgagatgaagatgcaagaagatttgaaagaaaaatatcctgaaattgatcaaaatcaacaaatccttcatcaattgatgcctaatgaagatgaaactt |
109 |
Q |
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| T |
6032403 |
agtgagatgaagatgcaagaagatttgaaagaaaaatatcctgaaattgatcaaaatcaacaaatccttcatcaattgatgcctaatgaagatgaaactt |
6032502 |
T |
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| Q |
110 |
caaaatcacttcaaagagatgatatctttaacttcattgaggaatctattgtgattaagagaaagttgaagaaatcttcttctcatcattatcaacaaaa |
209 |
Q |
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| T |
6032503 |
caaaatcacttcaaagagatgatatctttaacttcattgaggaatctattgtgattaagagaaagttgaagaaatcttcttctcatcattatcaacaaaa |
6032602 |
T |
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| Q |
210 |
cactaatttgatccctaaggaagctagttttgatcatgactctccaatgttatcaccaaattgggatgctaataataataacaatgatgctgccactgga |
309 |
Q |
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| T |
6032603 |
cactaatttgatccctaaggaagctagttttgatcatgactctccaatgttatcaccaaattgggatgctaataataataacaatgatgctgccactgga |
6032702 |
T |
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| Q |
310 |
agatccaacttttctgcaatatcaagaatgaatctatcatcaggtaactagtgtttttctttatttgataattgtttcactgtttcaaaacataaaatt |
408 |
Q |
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| T |
6032703 |
agatccaacttttctgcaatatcaagaatgaatctatcatcaggtaactagtgtttttctttatttgataattgtttcactgtttcaaaacataaaatt |
6032801 |
T |
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