View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8785_low_4 (Length: 245)

Name: NF8785_low_4
Description: NF8785
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8785_low_4
NF8785_low_4
[»] chr6 (11 HSPs)
chr6 (49-234)||(343160-343347)
chr6 (148-238)||(1266750-1266839)
chr6 (149-225)||(4996904-4996978)
chr6 (148-223)||(31205207-31205280)
chr6 (144-223)||(21513099-21513178)
chr6 (146-211)||(28594105-28594170)
chr6 (144-223)||(1855033-1855110)
chr6 (144-223)||(2959020-2959097)
chr6 (148-223)||(5660430-5660503)
chr6 (150-229)||(8977188-8977265)
chr6 (144-223)||(9727522-9727599)
[»] chr8 (10 HSPs)
chr8 (148-234)||(44604834-44604918)
chr8 (144-229)||(41562469-41562554)
chr8 (144-184)||(31261016-31261056)
chr8 (148-223)||(5700671-5700746)
chr8 (148-211)||(10926120-10926183)
chr8 (144-225)||(20993564-20993643)
chr8 (144-223)||(17919839-17919916)
chr8 (148-223)||(34540088-34540161)
chr8 (148-223)||(34711579-34711652)
chr8 (148-208)||(42650199-42650259)
[»] chr3 (14 HSPs)
chr3 (148-223)||(41464695-41464770)
chr3 (144-184)||(28731874-28731914)
chr3 (144-223)||(32590999-32591076)
chr3 (148-223)||(29212087-29212162)
chr3 (144-223)||(32597369-32597448)
chr3 (148-223)||(35069344-35069419)
chr3 (144-229)||(50238858-50238941)
chr3 (148-223)||(8128314-8128387)
chr3 (148-228)||(11751243-11751323)
chr3 (144-223)||(12088306-12088383)
chr3 (148-223)||(18271608-18271680)
chr3 (145-189)||(20625704-20625748)
chr3 (144-184)||(40193017-40193057)
chr3 (144-184)||(54923513-54923553)
[»] chr7 (15 HSPs)
chr7 (147-223)||(10422508-10422582)
chr7 (148-223)||(46274979-46275054)
chr7 (144-209)||(40857376-40857441)
chr7 (148-223)||(4227365-4227438)
chr7 (148-223)||(9234271-9234344)
chr7 (148-224)||(31300018-31300094)
chr7 (144-223)||(37117869-37117946)
chr7 (137-184)||(16862408-16862455)
chr7 (144-220)||(37938090-37938167)
chr7 (144-223)||(3861360-3861437)
chr7 (144-184)||(5523820-5523860)
chr7 (144-176)||(5876369-5876401)
chr7 (148-223)||(10061040-10061113)
chr7 (148-223)||(28649390-28649463)
chr7 (144-184)||(47086361-47086401)
[»] chr5 (15 HSPs)
chr5 (144-223)||(9068830-9068907)
chr5 (144-223)||(10011497-10011576)
chr5 (144-223)||(5203578-5203657)
chr5 (148-223)||(27003987-27004062)
chr5 (148-225)||(29293544-29293619)
chr5 (150-223)||(42645487-42645560)
chr5 (144-223)||(4617790-4617867)
chr5 (144-223)||(11968803-11968880)
chr5 (144-223)||(16496627-16496704)
chr5 (148-223)||(27389951-27390024)
chr5 (144-223)||(36259824-36259901)
chr5 (144-184)||(37940945-37940985)
chr5 (144-223)||(39150950-39151027)
chr5 (148-223)||(40044940-40045013)
chr5 (144-223)||(42448238-42448315)
[»] chr1 (13 HSPs)
chr1 (148-234)||(11403200-11403284)
chr1 (144-225)||(13980328-13980407)
chr1 (148-234)||(41651104-41651189)
chr1 (148-223)||(47429616-47429689)
chr1 (147-229)||(13048825-13048905)
chr1 (147-229)||(13053822-13053902)
chr1 (148-223)||(21522348-21522421)
chr1 (144-223)||(36586278-36586355)
chr1 (148-223)||(40958598-40958671)
chr1 (148-223)||(43086495-43086568)
chr1 (150-238)||(44836126-44836213)
chr1 (144-184)||(46850991-46851031)
chr1 (144-223)||(49948268-49948345)
[»] scaffold0633 (1 HSPs)
scaffold0633 (148-234)||(3807-3892)
[»] chr4 (15 HSPs)
chr4 (148-224)||(3084265-3084339)
chr4 (148-223)||(28033223-28033296)
chr4 (144-223)||(25698962-25699041)
chr4 (148-223)||(28758408-28758482)
chr4 (144-223)||(28187184-28187265)
chr4 (144-223)||(579266-579343)
chr4 (144-184)||(13218224-13218264)
chr4 (144-223)||(13632117-13632194)
chr4 (149-224)||(17358078-17358151)
chr4 (148-223)||(25586351-25586424)
chr4 (148-223)||(30044608-30044681)
chr4 (148-223)||(32104034-32104107)
chr4 (144-223)||(39997797-39997874)
chr4 (144-184)||(42116508-42116548)
chr4 (148-223)||(42856594-42856667)
[»] chr2 (12 HSPs)
chr2 (148-224)||(40592344-40592418)
chr2 (144-211)||(3048569-3048636)
chr2 (148-184)||(727350-727386)
chr2 (144-223)||(10202197-10202274)
chr2 (148-223)||(12541360-12541433)
chr2 (148-184)||(16178290-16178326)
chr2 (148-223)||(20251509-20251582)
chr2 (144-223)||(35476514-35476591)
chr2 (144-184)||(37644294-37644334)
chr2 (148-229)||(42160271-42160354)
chr2 (144-223)||(43461358-43461435)
chr2 (144-223)||(45049412-45049489)


Alignment Details
Target: chr6 (Bit Score: 149; Significance: 8e-79; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 49 - 234
Target Start/End: Complemental strand, 343347 - 343160
Alignment:
Q  49 cttctttctaacgatacagtgaagaaaaggtgagttttaatgtttcaactttttaaaattttggaaattccgttgtaagttctaattgaactggc--atg 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||    
T  343347 cttctttctaacgatacagtgaagaaaaggtgagttttaatgtttcaactttttaaaattttggaaattccgttgtaagttctagttgaactggcaaatg 343248  T
Q  147 tcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataatagttttttcat 234  Q
    |||||||||||||||||||||| | |||||||||||||||| |||||||||||||| ||||||||||| |||||||| ||||||||||    
T  343247 tcgaaattgttaggtcggacgctacgatcggtgttcgagtcccagtatctccatttgtgtgtgtgtgaatttataatggttttttcat 343160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 238
Target Start/End: Complemental strand, 1266839 - 1266750
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataatagttttttcatctca 238  Q
    ||||||||||||| |||||| ||||||||| |||||   ||||||| |||||||| ||||||||||||||||| ||||||||  |||||||    
T  1266839 cgaaattgttaggccggacgtcatgatcggggttcggacctcagtacctccattt-tgtgtgtgtgagtttatgatagttttgccatctca 1266750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 4996904 - 4996978
Alignment:
Q  149 gaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataatag 225  Q
    |||||||||||| |||| ||||||||||| |||||| || ||||| ||||| |  ||||||||||||||||||||||    
T  4996904 gaaattgttaggccggatgccatgatcggggttcgaatcccagtacctccact--tgtgtgtgtgagtttataatag 4996978  T

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Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 31205280 - 31205207
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||| |||| ||||||||||| ||||||  | ||||| ||||| |  ||||||||||||||||||||    
T  31205280 cgaaattgttaggccggatgccatgatcggggttcgaaccccagtacctccact--tgtgtgtgtgagtttataat 31205207  T

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Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 21513099 - 21513178
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||||||| |||| | |||||| || ||||||  | ||||| ||||| || ||||||||||| ||||||||    
T  21513099 atgtcgaaattgttaggccggatgtcatgattggggttcgaaccccagtacctccacttgtgtgtgtgtgaatttataat 21513178  T

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Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 211
Target Start/End: Complemental strand, 28594170 - 28594105
Alignment:
Q  146 gtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtg 211  Q
    ||||||||||||||| |||| ||||||||||| ||||||  ||| ||| ||||| || ||||||||    
T  28594170 gtcgaaattgttaggccggatgccatgatcggggttcgaacctcggtacctccacttgtgtgtgtg 28594105  T

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Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 1855033 - 1855110
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||| ||||||||| |||| ||||||||||| ||||||  | | ||| ||||| |  ||||||||||||||||||||    
T  1855033 atgtcgatattgttaggccggatgccatgatcggggttcgaaccccggtacctccact--tgtgtgtgtgagtttataat 1855110  T

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Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 2959020 - 2959097
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||||||| |||| ||||||| ||| ||||||  | | ||| ||||| |  ||||||||||||||||||||    
T  2959020 atgtcgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccact--tgtgtgtgtgagtttataat 2959097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 5660430 - 5660503
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||| |||| ||||||||||| ||||||  | | ||| ||||| |  ||||||||||||||||||||    
T  5660430 cgaaattgttaggccggatgccatgatcggggttcgaaccccggtacctccact--tgtgtgtgtgagtttataat 5660503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 229
Target Start/End: Original strand, 8977188 - 8977265
Alignment:
Q  150 aaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataatagtttt 229  Q
    ||||||||||| |||| | ||||||||| ||||||  | | ||| |||||||  |||||||||||||||||||| |||||    
T  8977188 aaattgttaggccggatgtcatgatcggggttcgaaccccggtacctccatt--tgtgtgtgtgagtttataatggtttt 8977265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 9727522 - 9727599
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||||||| ||||  |||||||||| ||||||  | | ||| ||||| |  ||||||||||||||||||||    
T  9727522 atgtcgaaattgttaggccggataccatgatcggggttcgaacccctgtacctccact--tgtgtgtgtgagtttataat 9727599  T

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Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 234
Target Start/End: Complemental strand, 44604918 - 44604834
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataatagttttttcat 234  Q
    |||||||||||||||||| ||||||||||| ||||||  | | ||| ||||| |||||||  |||||||||||||||||||| ||||    
T  44604918 cgaaattgttaggtcggatgccatgatcggggttcgaaccccggtacctccacttatgtg--tgtgagtttataatagttttgtcat 44604834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 41562469 - 41562554
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataatagtttt 229  Q
    ||||||||||||||||| |||| || |||||||| ||||||  | | ||| ||||| || |||||||||||||||||||| |||||    
T  41562469 atgtcgaaattgttaggccggatgctatgatcggggttcgaaccccggtacctccacttgtgtgtgtgtgagtttataatggtttt 41562554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 31261056 - 31261016
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcga 184  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  31261056 atgtcgaaattgttaggtcggacgccatgatcggggttcga 31261016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 5700746 - 5700671
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||| |||| || |||| ||| ||||||  | ||||| ||||| |||||||||||||||||||||||    
T  5700746 cgaaattgttaggccggatgctatgaccggggttcgaaccccagtacctccacttatgtgtgtgtgagtttataat 5700671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 10926183 - 10926120
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtg 211  Q
    |||||||||||||||||| || |||| |||  ||||| || ||||| |||||||||||||||||    
T  10926183 cgaaattgttaggtcggatgctatgaccgggattcgaatcccagtacctccatttatgtgtgtg 10926120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 20993564 - 20993643
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataatag 225  Q
    ||||||||||||||||| |||| || |||||||| ||||||  | | ||| ||||| |||  ||||||||||||||||||||    
T  20993564 atgtcgaaattgttaggccggatgctatgatcggggttcgaaccccggtacctccactta--tgtgtgtgagtttataatag 20993643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 17919916 - 17919839
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||| ||||||||| |||| ||||||| ||| ||||||  ||| ||| ||||| ||  |||||||||||||||||||    
T  17919916 atgtcgatattgttaggccggatgccatgaccggggttcgaacctcggtacctccactt--gtgtgtgtgagtttataat 17919839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 34540161 - 34540088
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||| |||| ||||||||||| ||| || || | ||| ||||| |  ||||||||||||||||||||    
T  34540161 cgaaattgttaggccggatgccatgatcggggtttgaatcccggtacctccact--tgtgtgtgtgagtttataat 34540088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 34711652 - 34711579
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    |||||||||||||||||| ||||||| ||| ||||||  | | ||| ||||| |  ||||||||||||||||||||    
T  34711652 cgaaattgttaggtcggatgccatgaccggggttcgaaccccggtacctccact--tgtgtgtgtgagtttataat 34711579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 42650199 - 42650259
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgt 208  Q
    |||||||||||||||||| |||||||| || ||||||  ||| ||| ||||| ||||||||    
T  42650199 cgaaattgttaggtcggatgccatgattggggttcgaacctcggtacctccacttatgtgt 42650259  T

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Target: chr3 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 41464695 - 41464770
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    |||||||||||||||||| ||||||| ||| ||||||  | ||||| ||||| || ||||||||||||||||||||    
T  41464695 cgaaattgttaggtcggatgccatgaccggggttcgaaccccagtacctccacttgtgtgtgtgtgagtttataat 41464770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 28731874 - 28731914
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcga 184  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  28731874 atgtcgaaattgttaggtcggatgccatgatcggggttcga 28731914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 32590999 - 32591076
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||||||| |||| ||||||||||| |||||| || | ||| ||||| |  ||||||||| ||||||||||    
T  32590999 atgtcgaaattgttaggccggatgccatgatcggggttcgaatcccggtacctccact--tgtgtgtgtcagtttataat 32591076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 29212162 - 29212087
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||| |||| ||||||| ||| ||||||  | | ||| ||||| || ||||||||||||||||||||    
T  29212162 cgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgtgagtttataat 29212087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 32597448 - 32597369
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    |||||||||||| || ||| ||| |||||| ||| |||||| || | ||| ||||| || ||||||||||||||||||||    
T  32597448 atgtcgaaattgctatgtcagacaccatgaccggggttcgaatcccggtacctccacttgtgtgtgtgtgagtttataat 32597369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 35069344 - 35069419
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||| |||| ||||||| ||| ||||||  | | ||| ||||| || ||||||||||||||||||||    
T  35069344 cgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccacttgtgtgtgtgtgagtttataat 35069419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 50238941 - 50238858
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataatagtttt 229  Q
    ||||||||||||||||| |||| ||||||||||| ||||||    | ||| ||||| |  |||||||||||||||||||| |||||    
T  50238941 atgtcgaaattgttaggccggatgccatgatcggagttcgaactccggtacctccact--tgtgtgtgtgagtttataatggtttt 50238858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 8128387 - 8128314
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||| |||| ||||||||||| ||||||  | | ||| ||||| |  ||||||||||||||||||||    
T  8128387 cgaaattgttaggccggatgccatgatcggggttcgaaccccggtacctccact--tgtgtgtgtgagtttataat 8128314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 228
Target Start/End: Original strand, 11751243 - 11751323
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataatagttt 228  Q
    ||||||||||||| |||| ||||| | ||| ||||||  | | ||| ||||| || |||||||||||||||||||| ||||    
T  11751243 cgaaattgttaggccggatgccatcaccggggttcgaaccccggtacctccacttgtgtgtgtgtgagtttataatggttt 11751323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 12088383 - 12088306
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||||||| |||| || |||||||| ||||||  | | ||| ||||| |  ||||||||||||||||||||    
T  12088383 atgtcgaaattgttaggccggatgctatgatcggggttcgaaccccggtacctccact--tgtgtgtgtgagtttataat 12088306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 18271608 - 18271680
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    |||||||||||||||||| ||||||||||| ||| || |||| ||| ||||| |  ||||| ||||||||||||||    
T  18271608 cgaaattgttaggtcggatgccatgatcgg-gtttgaatctcggtacctccact--tgtgtatgtgagtttataat 18271680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 20625748 - 20625704
Alignment:
Q  145 tgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctc 189  Q
    ||||||||||||||||||||| ||||||||| | |||||| ||||    
T  20625748 tgtcgaaattgttaggtcggatgccatgatcagggttcgaatctc 20625704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 40193057 - 40193017
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcga 184  Q
    ||||||||||||||||| |||| ||||||||||| ||||||    
T  40193057 atgtcgaaattgttaggccggatgccatgatcggagttcga 40193017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 54923513 - 54923553
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcga 184  Q
    |||||||||||||||||||||||| ||||| ||| ||||||    
T  54923513 atgtcgaaattgttaggtcggacgtcatgaccggggttcga 54923553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 223
Target Start/End: Original strand, 10422508 - 10422582
Alignment:
Q  147 tcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||||||||| ||||||||||| |||||| || | ||| ||||| |  ||||||||||||||||||||    
T  10422508 tcgaaattgttaggtcggatgccatgatcggggttcgaatcccggtacctccact--tgtgtgtgtgagtttataat 10422582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 46274979 - 46275054
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    |||||||||||||||||| ||||||| ||| |||||| || | ||| ||||| || |||||| |||||||||||||    
T  46274979 cgaaattgttaggtcggatgccatgaccggggttcgaatcccggtacctccacttgtgtgtgcgtgagtttataat 46275054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 40857441 - 40857376
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtg 209  Q
    |||||||||||||||||||||| ||||||||||| ||||||  | | ||| ||||| |||||||||    
T  40857441 atgtcgaaattgttaggtcggatgccatgatcggggttcgaaccccggtacctccacttatgtgtg 40857376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 4227365 - 4227438
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    |||||||||||||||||| ||||||||||| ||||||  | | ||| ||||| |  ||||||||||||||||||||    
T  4227365 cgaaattgttaggtcggatgccatgatcggggttcgaaccccggtacctccact--tgtgtgtgtgagtttataat 4227438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 9234344 - 9234271
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||| ||||||| |||| ||| |||||| || | ||||||||| |  ||||||||||||||||||||    
T  9234344 cgaaattgttaggccggacgctatgaccggagttcgaatcccggtatctccact--tgtgtgtgtgagtttataat 9234271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 31300094 - 31300018
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataata 224  Q
    ||||||||||| | |||| | ||||| ||| ||||||  ||| ||| ||||| ||||||||||||||||||||||||    
T  31300094 cgaaattgttaagccggatgtcatgaccggggttcgaacctcggtacctccacttatgtgtgtgtgagtttataata 31300018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 37117946 - 37117869
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    |||| ||||||||||||||||| ||||||||||| |||||| ||   ||| ||||| |  ||||||||||||||||||||    
T  37117946 atgttgaaattgttaggtcggatgccatgatcggggttcgaatcctggtaactccact--tgtgtgtgtgagtttataat 37117869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 16862408 - 16862455
Alignment:
Q  137 aactggcatgtcgaaattgttaggtcggacgccatgatcggtgttcga 184  Q
    |||||||||||||||||||||||| |||||| ||||||| | ||||||    
T  16862408 aactggcatgtcgaaattgttaggccggacgtcatgatcagagttcga 16862455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 37938167 - 37938090
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctcca-tttatgtgtgtgtgagtttat 220  Q
    |||| |||||||||||||| |||| |||||||||||||| |   ||| || ||||| |||||||||||| ||||||||    
T  37938167 atgttgaaattgttaggtcagacgtcatgatcggtgttcaaacatcaatacctccactttatgtgtgtgagagtttat 37938090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 3861437 - 3861360
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||||||| |||| | ||||||||| ||||||  | | ||| ||||| |  ||||||||||||||||||||    
T  3861437 atgtcgaaattgttaggccggatgtcatgatcggggttcgaaccccggtacctccact--tgtgtgtgtgagtttataat 3861360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 5523820 - 5523860
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcga 184  Q
    |||||||||||||||||||||| ||||||| ||| ||||||    
T  5523820 atgtcgaaattgttaggtcggatgccatgaccggggttcga 5523860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 176
Target Start/End: Original strand, 5876369 - 5876401
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcg 176  Q
    ||||||||||||||| |||||||||||||||||    
T  5876369 atgtcgaaattgttaagtcggacgccatgatcg 5876401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 10061113 - 10061040
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||| |||| ||||||| ||| |||||| || | ||| ||||| |  ||||||||||||||||||||    
T  10061113 cgaaattgttaggccggatgccatgaccggggttcgaatcccggtacctccact--tgtgtgtgtgagtttataat 10061040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 28649463 - 28649390
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    |||||||||||||||||| | ||||||||  ||||||  ||| ||| ||||| |  ||||||||||||||||||||    
T  28649463 cgaaattgttaggtcggatgtcatgatcgaagttcgaacctcggtacctccact--tgtgtgtgtgagtttataat 28649390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 47086401 - 47086361
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcga 184  Q
    ||||||||||||||||| |||| ||||||||||| ||||||    
T  47086401 atgtcgaaattgttaggccggatgccatgatcggggttcga 47086361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000006; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 9068830 - 9068907
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    |||||||||||||||||||||| ||||||||||| ||||||  | | ||| |||||||   |||||||||||||||||||    
T  9068830 atgtcgaaattgttaggtcggatgccatgatcggggttcgaaccccggtacctccatt--agtgtgtgtgagtttataat 9068907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 10011497 - 10011576
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    |||||||||||||||||||||| ||||||||||| ||||||    | ||| ||||| |||||| ||||||| ||||||||    
T  10011497 atgtcgaaattgttaggtcggatgccatgatcggagttcgaactccggtacctccacttatgtatgtgtgaatttataat 10011576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 5203578 - 5203657
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||||||| |||| ||||||| ||| ||||||  | |  || ||||| || ||||||||||||||||||||    
T  5203578 atgtcgaaattgttaggccggatgccatgaccggggttcgaaccccgatacctccacttgtgtgtgtgtgagtttataat 5203657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 27004062 - 27003987
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||   ||| ||||||||||| |||||| || | | | ||||| |||||||||||||||||||||||    
T  27004062 cgaaattgttagtctggatgccatgatcggggttcgaatcccggcacctccacttatgtgtgtgtgagtttataat 27003987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 29293619 - 29293544
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataatag 225  Q
    ||||||||||||| |||| ||||||||||| ||||||  ||| ||| ||||| |  |||||||||||||| |||||||    
T  29293619 cgaaattgttaggccggatgccatgatcggggttcgaacctcggtacctccact--tgtgtgtgtgagttcataatag 29293544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 223
Target Start/End: Complemental strand, 42645560 - 42645487
Alignment:
Q  150 aaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||| |||| ||||| | ||||||||| ||||||  ||| ||| ||||| |||||| ||||||||||||||||    
T  42645560 aaattattagatcggatgtcatgatcggggttcgaacctcggtacctccacttatgtatgtgtgagtttataat 42645487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 4617867 - 4617790
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||||||| |||| ||||||| ||| ||||||  | | ||| ||||| |  ||||||||||||||||||||    
T  4617867 atgtcgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccact--tgtgtgtgtgagtttataat 4617790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 11968803 - 11968880
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||||||| |||| ||||||| ||| ||||||  | ||||| ||||| |  ||||||| ||||||||||||    
T  11968803 atgtcgaaattgttaggccggatgccatgaccggggttcgaaccccagtacctccact--tgtgtgtatgagtttataat 11968880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 16496627 - 16496704
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||||||| |||| ||||||| ||| ||||||  | | ||| ||||| |  ||||||||||||||||||||    
T  16496627 atgtcgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccact--tgtgtgtgtgagtttataat 16496704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 27390024 - 27389951
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||| |||| ||||||| ||| ||||||  ||| ||| ||||| |||||||  ||||||||||||||    
T  27390024 cgaaattgttaggccggatgccatgaccggggttcgaacctcggtacctccacttatgtg--tgtgagtttataat 27389951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 36259824 - 36259901
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||||||| |||| | ||||| ||| |||||| || | ||| ||||| |||  ||||||||||||||||||    
T  36259824 atgtcgaaattgttaggccggatgtcatgaccggggttcgaatcccggtacctccactta--tgtgtgtgagtttataat 36259901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 37940945 - 37940985
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcga 184  Q
    ||||||||||||||||| |||| ||||||||||| ||||||    
T  37940945 atgtcgaaattgttaggccggatgccatgatcggggttcga 37940985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 39151027 - 39150950
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||||||| |||| ||||||| ||| ||||||  | | ||| ||||| |  ||||||||||||||||||||    
T  39151027 atgtcgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccact--tgtgtgtgtgagtttataat 39150950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 40045013 - 40044940
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    |||||||||||||||||| ||||||| | | |||||| ||  |||| ||||| |  ||||||||||||||||||||    
T  40045013 cgaaattgttaggtcggatgccatgaccagggttcgaatcctagtacctccact--tgtgtgtgtgagtttataat 40044940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 42448238 - 42448315
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||||||| |||| ||||||| ||| ||||||  | | ||| ||||| |  ||||||||||||||||||||    
T  42448238 atgtcgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccact--tgtgtgtgtgagtttataat 42448315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000002; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 234
Target Start/End: Original strand, 11403200 - 11403284
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataatagttttttcat 234  Q
    |||||||||||||||||| ||||||||||| ||||||  | | |||  ||||||  |||||||||||||||||||||| ||| ||||    
T  11403200 cgaaattgttaggtcggatgccatgatcggggttcgaaccccggtacatccatt--tgtgtgtgtgagtttataatagctttgtcat 11403284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 13980407 - 13980328
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataatag 225  Q
    ||||||||||||||||||||||   ||||||||| |||||| || | ||| ||||| |||||||  ||||||||||||||||    
T  13980407 atgtcgaaattgttaggtcggatatcatgatcggggttcgaatcccggtacctccacttatgtg--tgtgagtttataatag 13980328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 234
Target Start/End: Original strand, 41651104 - 41651189
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataatagttttttcat 234  Q
    |||||||||||||| ||||| ||||||||| |||||| || | ||| || ||||| | |||||||||||||||||| ||||| ||||    
T  41651104 cgaaattgttaggttggacgtcatgatcggggttcgaatcccggtaccttcattt-tatgtgtgtgagtttataatggttttgtcat 41651189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 47429689 - 47429616
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||| |||| ||||||||||| |||||| || | ||| ||||| |||||||  ||||||||||||||    
T  47429689 cgaaattgttaggccggatgccatgatcggggttcgaatcccggtacctccacttatgtg--tgtgagtttataat 47429616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 13048905 - 13048825
Alignment:
Q  147 tcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataatagtttt 229  Q
    |||||||||||||| |||| | ||||||||| ||||||  | | ||| |||||||||||||  |||||||||||||| |||||    
T  13048905 tcgaaattgttaggccggatgtcatgatcggagttcgaaccccggtacctccatttatgtg--tgtgagtttataatggtttt 13048825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 229
Target Start/End: Complemental strand, 13053902 - 13053822
Alignment:
Q  147 tcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataatagtttt 229  Q
    |||||||||||||| |||| | ||||||||| ||||||  | | ||| |||||||||||||  |||||||||||||| |||||    
T  13053902 tcgaaattgttaggccggatgtcatgatcggagttcgaaccccggtacctccatttatgtg--tgtgagtttataatggtttt 13053822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 21522348 - 21522421
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    |||||||||||||||||| ||||||| ||| ||||||  | | ||| ||||| |  ||||||||||||||||||||    
T  21522348 cgaaattgttaggtcggatgccatgaccggggttcgaaccccggtacctccact--tgtgtgtgtgagtttataat 21522421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 36586278 - 36586355
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||||||| |||| ||| ||||||| ||||||  | | ||| ||||| |  ||||||||||||||||||||    
T  36586278 atgtcgaaattgttaggccggatgccgtgatcggggttcgaaccccggtacctccact--tgtgtgtgtgagtttataat 36586355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 40958671 - 40958598
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||| |||| ||||||| ||| |||||| || | ||| ||||| |  ||||||||||||||||||||    
T  40958671 cgaaattgttaggccggatgccatgaccggggttcgaatcccggtacctccact--tgtgtgtgtgagtttataat 40958598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 43086568 - 43086495
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||| |||| ||||||||||| ||||||  | | ||| ||||| |  ||||||||||||||||||||    
T  43086568 cgaaattgttaggccggatgccatgatcggggttcgaaccccggtacctccact--tgtgtgtgtgagtttataat 43086495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 238
Target Start/End: Complemental strand, 44836213 - 44836126
Alignment:
Q  150 aaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataatagttttttcatctca 238  Q
    |||||||||||||||||| ||||||||| ||||||  | | ||||||||| || | | ||||||||||||| || | ||| ||||||||    
T  44836213 aaattgttaggtcggacgtcatgatcggggttcgaaccccggtatctccactt-tatatgtgtgagtttatgatggctttgtcatctca 44836126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 46850991 - 46851031
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcga 184  Q
    |||||||||||||||||||||| ||||||||| | ||||||    
T  46850991 atgtcgaaattgttaggtcggatgccatgatccgggttcga 46851031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 49948268 - 49948345
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||||||| |||| ||||||| |||  |||||  | ||||| ||||| |  ||||||||||||||||||||    
T  49948268 atgtcgaaattgttaggccggatgccatgaccgggattcgaaccccagtacctccact--tgtgtgtgtgagtttataat 49948345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0633 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0633
Description:

Target: scaffold0633; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 148 - 234
Target Start/End: Complemental strand, 3892 - 3807
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataatagttttttcat 234  Q
    |||||||||||||| ||||| ||||||||| |||||| || | ||| || ||||| | |||||||||||||||||| ||||| ||||    
T  3892 cgaaattgttaggttggacgtcatgatcggggttcgaatcccggtaccttcattt-tatgtgtgtgagtttataatggttttgtcat 3807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 224
Target Start/End: Complemental strand, 3084339 - 3084265
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataata 224  Q
    |||||||||||||||||| ||||||||||| |||||| || |  || ||||| |  |||||||||||||||||||||    
T  3084339 cgaaattgttaggtcggatgccatgatcggggttcgaatcccgatacctccact--tgtgtgtgtgagtttataata 3084265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 28033223 - 28033296
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||| |||| ||||||| ||| ||||||  | ||||||||||| |  ||||||||||||||||||||    
T  28033223 cgaaattgttaggccggatgccatgaccggggttcgaaccccagtatctccact--tgtgtgtgtgagtttataat 28033296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 25699041 - 25698962
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||| ||||| |||| ||||||||||| ||||||    | ||| ||||| || ||||||||||||||||||||    
T  25699041 atgtcgaaattattaggccggatgccatgatcggagttcgaacagcggtacctccacttgtgtgtgtgtgagtttataat 25698962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 28758408 - 28758482
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||| |||||||||||| ||||| ||| ||||||  | ||||| ||||| || ||||||||||||||||||||    
T  28758408 cgaaattattaggtcggacgtcatgaccggagttcgaaccccagtacctccactt-tgtgtgtgtgagtttataat 28758482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 28187265 - 28187184
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccattta--tgtgtgtgtgagtttataat 223  Q
    ||||||||||||||||| |||| || |||||||| ||||||    ||||| ||||| |||  ||||||||||||||||||||    
T  28187265 atgtcgaaattgttaggccggatgctatgatcggggttcgaactccagtacctccacttatgtgtgtgtgtgagtttataat 28187184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 579343 - 579266
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||||||| |||| | ||||||||| ||||||  | | ||| ||||| |||||||  ||||||||||||||    
T  579343 atgtcgaaattgttaggccggatgtcatgatcggggttcgaaccccggtacctccacttatgtg--tgtgagtttataat 579266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 13218224 - 13218264
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcga 184  Q
    ||||| |||||||||||||||| ||||||||||| ||||||    
T  13218224 atgtcaaaattgttaggtcggatgccatgatcggggttcga 13218264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 13632117 - 13632194
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||||||| |||| ||||||| ||  ||||||  | ||||| ||||| |  ||||||||||||||||||||    
T  13632117 atgtcgaaattgttaggccggatgccatgaccgaggttcgaaccccagtacctccact--tgtgtgtgtgagtttataat 13632194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 17358078 - 17358151
Alignment:
Q  149 gaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataata 224  Q
    |||||||||||  |||| | ||||||||| ||||||  | ||||||||||| |  |||||||||||||||||||||    
T  17358078 gaaattgttagaccggatgtcatgatcggggttcgaaccccagtatctccact--tgtgtgtgtgagtttataata 17358151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 25586424 - 25586351
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||| |||| ||||||||||| ||||||  | | ||| ||||| |||||||  ||||||||||||||    
T  25586424 cgaaattgttaggccggatgccatgatcggggttcgaaccccggtacctccacttatgtg--tgtgagtttataat 25586351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 30044681 - 30044608
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||| |||| ||||||||||| ||||||  | | ||| ||||| |  ||||||||||||||||||||    
T  30044681 cgaaattgttaggccggatgccatgatcggggttcgaaccccggtacctccact--tgtgtgtgtgagtttataat 30044608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 32104107 - 32104034
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||| |||| ||||||| ||| |||||| || |||||  |||| |  ||||||||||||||||||||    
T  32104107 cgaaattgttaggccggatgccatgaccggggttcgaatcccagtacttccact--tgtgtgtgtgagtttataat 32104034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 39997874 - 39997797
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||||||| ||||  |||||| ||| ||||||  ||| ||| ||||| |  ||||||||||||||||||||    
T  39997874 atgtcgaaattgttaggccggataccatgaccggggttcgaacctcggtacctccact--tgtgtgtgtgagtttataat 39997797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 42116508 - 42116548
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcga 184  Q
    ||||||||||| |||||||||| ||||||||||| ||||||    
T  42116508 atgtcgaaatttttaggtcggatgccatgatcggggttcga 42116548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 42856594 - 42856667
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||| |||| ||||||||||| |||||| |  | ||| ||||| |  ||||||||||||||||||||    
T  42856594 cgaaattgttaggccggatgccatgatcggggttcgaattccggtacctccact--tgtgtgtgtgagtttataat 42856667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 40592344 - 40592418
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataata 224  Q
    |||||||||||||||||| ||||||| ||| |||||| || | ||||||||| |  |||| ||||||||||||||||    
T  40592344 cgaaattgttaggtcggatgccatgaccggggttcgaatcccggtatctccact--tgtgcgtgtgagtttataata 40592418  T

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Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 3048569 - 3048636
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtg 211  Q
    ||||||||||||||||| |||| ||||||||||| ||||||  | | ||| ||||| |||||||||||    
T  3048569 atgtcgaaattgttaggccggatgccatgatcggggttcgaaccccggtacctccacttatgtgtgtg 3048636  T

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Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 727386 - 727350
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcga 184  Q
    |||||||||||||||||| ||||||||||| ||||||    
T  727386 cgaaattgttaggtcggatgccatgatcggggttcga 727350  T

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Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 10202197 - 10202274
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||||||| |||| || |||||||| ||||||   |||||| ||||| |||  | ||||||||||||||||    
T  10202197 atgtcgaaattgttaggccggatgctatgatcggggttcgaacttcagtacctccactta--tatgtgtgagtttataat 10202274  T

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Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 12541433 - 12541360
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    |||||||||||||||||| | ||||||||| ||||||  ||| ||| || || |  ||||||||||||||||||||    
T  12541433 cgaaattgttaggtcggatgtcatgatcggggttcgaacctcggtaccttcact--tgtgtgtgtgagtttataat 12541360  T

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Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 16178290 - 16178326
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcga 184  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  16178290 cgaaattgttaggtaggacgccatgatcggggttcga 16178326  T

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Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 20251582 - 20251509
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||| |||| ||||||||||| ||||||  | | ||| ||||| |  ||||||||||||||||||||    
T  20251582 cgaaattgttaggccggatgccatgatcggggttcgaaccccggtacctccact--tgtgtgtgtgagtttataat 20251509  T

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Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 35476591 - 35476514
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||||||| |||| ||||||| ||| ||||||  | | ||| ||||| |  ||||||||||||||||||||    
T  35476591 atgtcgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccact--tgtgtgtgtgagtttataat 35476514  T

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Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 37644334 - 37644294
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcga 184  Q
    ||||||||||||||||| |||| ||||||||||| ||||||    
T  37644334 atgtcgaaattgttaggccggatgccatgatcggggttcga 37644294  T

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Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 42160354 - 42160271
Alignment:
Q  148 cgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatg--tgtgtgtgagtttataatagtttt 229  Q
    ||||||||||||| |||| | ||||||||| ||||||  | | ||| ||||| |||||  |||||||||||||||||| |||||    
T  42160354 cgaaattgttaggccggatgtcatgatcggggttcgaaccccggtacctccacttatgtatgtgtgtgagtttataatggtttt 42160271  T

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Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 43461435 - 43461358
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||||||| |||| ||||||| ||| ||||||  | | ||| ||||| |  ||||||||||||||||||||    
T  43461435 atgtcgaaattgttaggccggatgccatgaccggggttcgaaccccggtacctccact--tgtgtgtgtgagtttataat 43461358  T

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Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 45049412 - 45049489
Alignment:
Q  144 atgtcgaaattgttaggtcggacgccatgatcggtgttcgagtctcagtatctccatttatgtgtgtgtgagtttataat 223  Q
    ||||||||||||||||| |||| | ||||| ||| |||||| || | ||| ||||| |  ||||||||||||||||||||    
T  45049412 atgtcgaaattgttaggccggatgtcatgaccggggttcgaatcccggtacctccact--tgtgtgtgtgagtttataat 45049489  T

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