View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8788_high_10 (Length: 239)

Name: NF8788_high_10
Description: NF8788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8788_high_10
NF8788_high_10
[»] chr3 (62 HSPs)
chr3 (1-239)||(3376186-3376425)
chr3 (118-239)||(43775390-43775511)
chr3 (118-239)||(33491139-33491260)
chr3 (142-239)||(28885803-28885899)
chr3 (130-239)||(51697575-51697685)
chr3 (118-239)||(13158439-13158560)
chr3 (118-239)||(34266440-34266561)
chr3 (142-235)||(40139858-40139951)
chr3 (118-239)||(43945504-43945625)
chr3 (118-239)||(54106388-54106509)
chr3 (118-239)||(54898086-54898207)
chr3 (118-234)||(53745282-53745398)
chr3 (118-239)||(19550371-19550492)
chr3 (118-239)||(20848724-20848845)
chr3 (118-239)||(27483788-27483909)
chr3 (118-235)||(32980769-32980886)
chr3 (118-239)||(33074278-33074399)
chr3 (130-239)||(52663567-52663676)
chr3 (139-239)||(47104176-47104276)
chr3 (130-239)||(24981415-24981524)
chr3 (118-239)||(27992365-27992486)
chr3 (118-239)||(35315257-35315378)
chr3 (139-239)||(17102879-17102979)
chr3 (139-239)||(29458224-29458324)
chr3 (163-235)||(54911346-54911418)
chr3 (176-239)||(45513673-45513736)
chr3 (118-239)||(29698115-29698237)
chr3 (121-239)||(47069860-47069978)
chr3 (142-239)||(29651793-29651890)
chr3 (142-239)||(40318952-40319049)
chr3 (118-239)||(41425754-41425875)
chr3 (118-239)||(45145253-45145374)
chr3 (139-239)||(46973548-46973648)
chr3 (139-234)||(790680-790775)
chr3 (118-233)||(29803779-29803894)
chr3 (121-239)||(51244749-51244867)
chr3 (118-235)||(27039606-27039723)
chr3 (130-235)||(42671902-42672007)
chr3 (118-239)||(45101358-45101479)
chr3 (139-239)||(39866870-39866970)
chr3 (121-233)||(43554520-43554632)
chr3 (203-239)||(49123648-49123684)
chr3 (118-234)||(52627238-52627354)
chr3 (144-239)||(41351220-41351315)
chr3 (117-239)||(3643195-3643317)
chr3 (121-239)||(6902403-6902521)
chr3 (142-239)||(41926803-41926903)
chr3 (118-235)||(5243936-5244052)
chr3 (118-235)||(8236895-8237012)
chr3 (118-239)||(33874546-33874667)
chr3 (206-239)||(41168886-41168919)
chr3 (139-235)||(11473531-11473627)
chr3 (139-239)||(25983684-25983783)
chr3 (139-235)||(40010685-40010781)
chr3 (203-239)||(55141561-55141597)
chr3 (140-239)||(24086-24185)
chr3 (139-233)||(32853969-32854063)
chr3 (153-238)||(36370863-36370948)
chr3 (118-235)||(50092074-50092191)
chr3 (139-239)||(32853381-32853481)
chr3 (203-239)||(44544112-44544148)
chr3 (203-239)||(48152110-48152146)
[»] chr8 (70 HSPs)
chr8 (118-239)||(12342608-12342729)
chr8 (121-239)||(10180495-10180613)
chr8 (118-239)||(33314669-33314790)
chr8 (121-239)||(21651743-21651861)
chr8 (118-239)||(36058357-36058478)
chr8 (139-239)||(27518728-27518828)
chr8 (139-233)||(2456130-2456224)
chr8 (118-235)||(15596473-15596590)
chr8 (118-239)||(18291588-18291709)
chr8 (117-239)||(26062832-26062954)
chr8 (118-235)||(8453230-8453347)
chr8 (118-239)||(33935054-33935175)
chr8 (120-239)||(34046976-34047095)
chr8 (117-239)||(9954774-9954896)
chr8 (117-239)||(40228420-40228542)
chr8 (118-239)||(18842654-18842775)
chr8 (118-235)||(23848550-23848667)
chr8 (118-239)||(35052178-35052299)
chr8 (121-235)||(41308024-41308139)
chr8 (114-235)||(1202434-1202555)
chr8 (118-239)||(1245437-1245558)
chr8 (130-239)||(14263669-14263778)
chr8 (118-239)||(34981954-34982075)
chr8 (118-239)||(38482786-38482907)
chr8 (118-235)||(43641983-43642100)
chr8 (130-239)||(14228328-14228437)
chr8 (118-239)||(17074576-17074697)
chr8 (118-239)||(17573573-17573694)
chr8 (118-239)||(38128541-38128662)
chr8 (142-234)||(45281396-45281488)
chr8 (121-235)||(16656829-16656943)
chr8 (117-239)||(23430034-23430156)
chr8 (118-235)||(39303509-39303627)
chr8 (118-239)||(2888462-2888583)
chr8 (118-239)||(4057413-4057534)
chr8 (118-239)||(8672619-8672740)
chr8 (142-239)||(32010102-32010199)
chr8 (121-233)||(25703575-25703687)
chr8 (121-233)||(25812746-25812858)
chr8 (118-233)||(11994012-11994127)
chr8 (177-235)||(15623664-15623722)
chr8 (177-235)||(15647452-15647510)
chr8 (130-239)||(8554022-8554131)
chr8 (118-235)||(13174058-13174175)
chr8 (139-224)||(17313282-17313367)
chr8 (118-239)||(23855682-23855803)
chr8 (142-239)||(40603869-40603966)
chr8 (204-239)||(3513482-3513517)
chr8 (176-239)||(9808026-9808089)
chr8 (121-239)||(39615450-39615567)
chr8 (146-239)||(17718628-17718721)
chr8 (139-235)||(9687529-9687625)
chr8 (139-239)||(14511445-14511545)
chr8 (118-239)||(23793265-23793390)
chr8 (139-235)||(36111956-36112052)
chr8 (139-235)||(41643505-41643601)
chr8 (140-239)||(43553164-43553263)
chr8 (205-239)||(13327904-13327938)
chr8 (118-235)||(6757535-6757652)
chr8 (194-235)||(11707555-11707596)
chr8 (118-239)||(15281504-15281625)
chr8 (118-239)||(15461873-15461994)
chr8 (118-239)||(26740131-26740252)
chr8 (118-235)||(35296173-35296290)
chr8 (118-235)||(38221941-38222058)
chr8 (203-239)||(167556-167592)
chr8 (203-239)||(12248849-12248885)
chr8 (139-239)||(27911687-27911787)
chr8 (139-239)||(27958106-27958206)
chr8 (203-239)||(35029671-35029707)
[»] chr5 (63 HSPs)
chr5 (118-239)||(16124251-16124372)
chr5 (118-239)||(7403959-7404080)
chr5 (118-235)||(9127342-9127459)
chr5 (118-239)||(37303098-37303219)
chr5 (118-239)||(14793781-14793902)
chr5 (118-239)||(9076178-9076299)
chr5 (118-239)||(12664965-12665086)
chr5 (139-239)||(28446997-28447097)
chr5 (118-235)||(4985166-4985283)
chr5 (130-235)||(24074841-24074946)
chr5 (118-239)||(28024250-28024371)
chr5 (118-234)||(26854086-26854202)
chr5 (142-239)||(38502819-38502912)
chr5 (118-239)||(34261419-34261540)
chr5 (139-239)||(2133919-2134018)
chr5 (118-239)||(7579658-7579780)
chr5 (118-239)||(8825164-8825285)
chr5 (118-239)||(38363296-38363417)
chr5 (118-239)||(42911657-42911778)
chr5 (118-234)||(38910385-38910501)
chr5 (121-239)||(1087927-1088045)
chr5 (121-239)||(10359229-10359347)
chr5 (145-239)||(19831560-19831654)
chr5 (142-236)||(30368150-30368244)
chr5 (130-239)||(3243903-3244012)
chr5 (142-239)||(4694871-4694968)
chr5 (118-235)||(6754170-6754287)
chr5 (118-239)||(7408438-7408559)
chr5 (130-239)||(12869902-12870011)
chr5 (118-239)||(18020759-18020880)
chr5 (130-235)||(36239569-36239674)
chr5 (118-235)||(38702252-38702369)
chr5 (118-239)||(39073151-39073272)
chr5 (139-239)||(3686797-3686897)
chr5 (117-239)||(1297727-1297850)
chr5 (117-239)||(4017521-4017643)
chr5 (121-239)||(4098438-4098556)
chr5 (142-239)||(6072559-6072656)
chr5 (142-239)||(6689706-6689803)
chr5 (118-239)||(25344067-25344188)
chr5 (139-232)||(31546011-31546104)
chr5 (142-239)||(39893824-39893921)
chr5 (139-239)||(4962198-4962298)
chr5 (171-239)||(40198895-40198963)
chr5 (118-235)||(2673969-2674086)
chr5 (118-239)||(4175471-4175592)
chr5 (142-239)||(32389093-32389190)
chr5 (139-239)||(6330928-6331028)
chr5 (163-239)||(8229839-8229915)
chr5 (139-235)||(18794894-18794990)
chr5 (139-239)||(22582579-22582679)
chr5 (139-235)||(42393760-42393856)
chr5 (140-239)||(25027588-25027687)
chr5 (117-231)||(18465812-18465926)
chr5 (118-235)||(13461121-13461238)
chr5 (118-239)||(18437314-18437435)
chr5 (142-239)||(38017292-38017389)
chr5 (118-235)||(38308117-38308234)
chr5 (203-239)||(4688874-4688910)
chr5 (163-239)||(5119285-5119361)
chr5 (139-235)||(28463397-28463493)
chr5 (139-236)||(31985062-31985159)
chr5 (139-235)||(32439924-32440020)
[»] chr4 (69 HSPs)
chr4 (118-239)||(354094-354215)
chr4 (118-239)||(19093148-19093269)
chr4 (130-235)||(53125245-53125350)
chr4 (143-239)||(47251541-47251637)
chr4 (118-239)||(40412071-40412192)
chr4 (118-235)||(52061690-52061807)
chr4 (118-239)||(54231667-54231788)
chr4 (118-235)||(55703052-55703169)
chr4 (108-239)||(38542261-38542392)
chr4 (118-235)||(12252224-12252341)
chr4 (118-239)||(13629188-13629309)
chr4 (118-239)||(16464777-16464898)
chr4 (139-239)||(31984168-31984268)
chr4 (121-239)||(18135048-18135167)
chr4 (118-233)||(22828396-22828511)
chr4 (121-239)||(49122258-49122377)
chr4 (121-239)||(44069159-44069277)
chr4 (118-239)||(21044743-21044863)
chr4 (130-239)||(22678316-22678425)
chr4 (118-239)||(31861981-31862102)
chr4 (118-239)||(44013908-44014029)
chr4 (118-239)||(44217834-44217955)
chr4 (121-239)||(5374348-5374466)
chr4 (118-239)||(38617304-38617423)
chr4 (118-239)||(8735517-8735638)
chr4 (130-239)||(26906396-26906505)
chr4 (118-239)||(33755026-33755147)
chr4 (130-239)||(35232305-35232414)
chr4 (121-239)||(35381417-35381531)
chr4 (130-235)||(42099840-42099945)
chr4 (130-239)||(46872049-46872158)
chr4 (130-235)||(48782331-48782436)
chr4 (118-239)||(53599781-53599902)
chr4 (139-239)||(29295482-29295582)
chr4 (139-235)||(42645393-42645489)
chr4 (118-234)||(56576099-56576215)
chr4 (180-239)||(4201375-4201434)
chr4 (118-185)||(17698644-17698711)
chr4 (140-239)||(39671453-39671552)
chr4 (130-235)||(16664373-16664478)
chr4 (118-239)||(26620346-26620467)
chr4 (118-239)||(33084606-33084722)
chr4 (142-239)||(55147080-55147177)
chr4 (118-233)||(19527215-19527330)
chr4 (118-233)||(35231824-35231939)
chr4 (139-233)||(37502156-37502250)
chr4 (130-235)||(47884994-47885100)
chr4 (142-239)||(23237758-23237855)
chr4 (142-239)||(39683733-39683830)
chr4 (139-239)||(3436083-3436183)
chr4 (139-239)||(44549771-44549871)
chr4 (203-239)||(52677225-52677261)
chr4 (118-233)||(47596608-47596723)
chr4 (140-239)||(47751658-47751757)
chr4 (121-239)||(36408851-36408969)
chr4 (121-239)||(36423017-36423135)
chr4 (176-233)||(23621905-23621962)
chr4 (142-239)||(50623542-50623638)
chr4 (203-239)||(8741704-8741740)
chr4 (203-239)||(47428657-47428693)
chr4 (118-233)||(23719779-23719894)
chr4 (121-235)||(52257789-52257903)
chr4 (130-239)||(36659434-36659543)
chr4 (118-235)||(45725668-45725785)
chr4 (117-174)||(52677160-52677217)
chr4 (203-239)||(19731452-19731488)
chr4 (203-239)||(30939283-30939319)
chr4 (203-239)||(42513106-42513142)
chr4 (163-239)||(47093940-47094016)
[»] chr2 (42 HSPs)
chr2 (118-239)||(4654844-4654965)
chr2 (117-239)||(4883728-4883850)
chr2 (118-239)||(11222313-11222434)
chr2 (117-239)||(36404837-36404959)
chr2 (118-239)||(15182998-15183119)
chr2 (118-239)||(34357303-34357424)
chr2 (118-239)||(30264599-30264720)
chr2 (118-235)||(44360562-44360679)
chr2 (113-239)||(14295749-14295875)
chr2 (121-239)||(38186053-38186170)
chr2 (142-239)||(478994-479091)
chr2 (121-239)||(14308518-14308636)
chr2 (121-239)||(19594475-19594593)
chr2 (118-239)||(3363709-3363830)
chr2 (130-239)||(10263882-10263990)
chr2 (118-239)||(10812324-10812445)
chr2 (118-239)||(26342705-26342826)
chr2 (118-239)||(34399327-34399448)
chr2 (118-239)||(36375698-36375819)
chr2 (130-239)||(41885750-41885859)
chr2 (139-239)||(11560065-11560165)
chr2 (118-239)||(3376274-3376395)
chr2 (118-239)||(15893577-15893698)
chr2 (163-239)||(14288556-14288632)
chr2 (120-239)||(37093575-37093693)
chr2 (139-239)||(25558204-25558304)
chr2 (165-239)||(36824516-36824590)
chr2 (118-239)||(38072229-38072344)
chr2 (118-239)||(4952693-4952814)
chr2 (114-239)||(9370099-9370224)
chr2 (118-239)||(9706912-9707033)
chr2 (118-239)||(13965732-13965853)
chr2 (142-239)||(32543808-32543905)
chr2 (203-239)||(14541456-14541492)
chr2 (171-239)||(15677341-15677409)
chr2 (139-231)||(34884556-34884648)
chr2 (204-239)||(28145655-28145690)
chr2 (130-232)||(928043-928144)
chr2 (118-235)||(31011715-31011831)
chr2 (203-239)||(8443816-8443852)
chr2 (139-235)||(13215522-13215618)
chr2 (139-238)||(13754081-13754181)
[»] chr7 (40 HSPs)
chr7 (118-239)||(5732070-5732191)
chr7 (118-239)||(33921771-33921892)
chr7 (118-239)||(33173932-33174053)
chr7 (139-239)||(7477216-7477316)
chr7 (139-239)||(44480160-44480260)
chr7 (130-235)||(36298183-36298288)
chr7 (139-235)||(26724053-26724149)
chr7 (118-239)||(31430684-31430805)
chr7 (120-239)||(41891395-41891514)
chr7 (137-239)||(37353886-37353988)
chr7 (130-239)||(33099844-33099953)
chr7 (118-233)||(41675184-41675298)
chr7 (118-239)||(8381951-8382072)
chr7 (117-239)||(3837987-3838109)
chr7 (118-239)||(36922364-36922486)
chr7 (130-239)||(7312742-7312851)
chr7 (130-239)||(8265074-8265183)
chr7 (118-239)||(28608719-28608840)
chr7 (118-235)||(30866733-30866850)
chr7 (118-198)||(6799585-6799665)
chr7 (139-235)||(29497552-29497648)
chr7 (143-239)||(31398954-31399049)
chr7 (144-239)||(38168811-38168907)
chr7 (200-239)||(17896602-17896641)
chr7 (144-239)||(18470432-18470527)
chr7 (176-239)||(26632235-26632298)
chr7 (142-239)||(10227381-10227478)
chr7 (118-239)||(22950815-22950936)
chr7 (130-239)||(32528337-32528446)
chr7 (118-239)||(32966046-32966167)
chr7 (118-239)||(33258006-33258127)
chr7 (118-239)||(47408238-47408359)
chr7 (142-239)||(35746666-35746763)
chr7 (203-239)||(20035173-20035209)
chr7 (203-239)||(20045584-20045620)
chr7 (203-233)||(3310347-3310377)
chr7 (118-235)||(8380589-8380706)
chr7 (118-239)||(31815066-31815186)
chr7 (142-239)||(36648026-36648123)
chr7 (139-239)||(35112554-35112654)
[»] chr1 (55 HSPs)
chr1 (118-239)||(13699299-13699420)
chr1 (117-235)||(2059802-2059920)
chr1 (118-239)||(10676027-10676148)
chr1 (118-239)||(12231062-12231183)
chr1 (118-239)||(13566804-13566925)
chr1 (130-239)||(35483784-35483893)
chr1 (118-239)||(37437044-37437165)
chr1 (139-239)||(32994481-32994581)
chr1 (118-239)||(1024681-1024802)
chr1 (118-235)||(8464248-8464365)
chr1 (118-239)||(29830878-29830999)
chr1 (118-239)||(43500631-43500752)
chr1 (139-239)||(45368213-45368313)
chr1 (117-239)||(20605614-20605736)
chr1 (118-239)||(19349370-19349491)
chr1 (118-239)||(19929457-19929578)
chr1 (118-239)||(30686536-30686657)
chr1 (142-239)||(39412526-39412623)
chr1 (119-239)||(1677323-1677443)
chr1 (121-239)||(38648582-38648700)
chr1 (121-239)||(48508258-48508376)
chr1 (118-239)||(31487770-31487891)
chr1 (118-230)||(7783084-7783196)
chr1 (139-239)||(35255611-35255711)
chr1 (118-234)||(35531286-35531402)
chr1 (176-239)||(28679146-28679209)
chr1 (118-239)||(37609295-37609413)
chr1 (118-239)||(12124769-12124890)
chr1 (118-239)||(13507895-13508016)
chr1 (118-239)||(13515083-13515204)
chr1 (139-239)||(21927708-21927808)
chr1 (130-222)||(40926756-40926848)
chr1 (139-239)||(50825585-50825684)
chr1 (139-239)||(51972293-51972393)
chr1 (118-239)||(1429409-1429530)
chr1 (202-239)||(18033901-18033938)
chr1 (118-239)||(35700366-35700487)
chr1 (118-235)||(38597720-38597837)
chr1 (134-235)||(52749144-52749245)
chr1 (118-233)||(5598186-5598291)
chr1 (179-239)||(49497277-49497337)
chr1 (118-233)||(9127800-9127915)
chr1 (177-239)||(43952913-43952975)
chr1 (121-239)||(45226571-45226689)
chr1 (118-239)||(51974162-51974283)
chr1 (203-239)||(24781810-24781846)
chr1 (139-239)||(32348103-32348203)
chr1 (139-239)||(35605723-35605823)
chr1 (203-239)||(44818579-44818615)
chr1 (117-239)||(30702280-30702402)
chr1 (118-235)||(1428534-1428651)
chr1 (118-235)||(9362102-9362219)
chr1 (118-239)||(10506936-10507057)
chr1 (162-239)||(48265071-48265148)
chr1 (143-239)||(31588756-31588851)
[»] chr6 (38 HSPs)
chr6 (118-233)||(30416070-30416185)
chr6 (117-239)||(17123979-17124101)
chr6 (118-235)||(22050177-22050294)
chr6 (118-239)||(26470718-26470839)
chr6 (118-239)||(3621715-3621836)
chr6 (139-235)||(1252295-1252391)
chr6 (130-236)||(1751438-1751544)
chr6 (118-239)||(8992673-8992795)
chr6 (118-239)||(9017120-9017242)
chr6 (117-239)||(23923707-23923829)
chr6 (130-239)||(373848-373957)
chr6 (139-239)||(7632053-7632153)
chr6 (118-239)||(17193283-17193404)
chr6 (118-239)||(24663504-24663625)
chr6 (121-239)||(3850445-3850563)
chr6 (118-239)||(17836018-17836139)
chr6 (118-239)||(26485680-26485801)
chr6 (142-239)||(8176558-8176655)
chr6 (118-239)||(9838117-9838238)
chr6 (173-239)||(13597534-13597600)
chr6 (142-239)||(1923977-1924074)
chr6 (118-239)||(23777421-23777542)
chr6 (142-235)||(24635837-24635930)
chr6 (139-239)||(7056156-7056256)
chr6 (203-239)||(7235565-7235601)
chr6 (118-233)||(11128962-11129077)
chr6 (200-239)||(17601217-17601256)
chr6 (142-232)||(22784687-22784777)
chr6 (118-239)||(12732300-12732421)
chr6 (203-235)||(52792-52824)
chr6 (203-239)||(11676695-11676731)
chr6 (203-239)||(17251336-17251372)
chr6 (118-218)||(24949253-24949353)
chr6 (203-239)||(30237103-30237139)
chr6 (203-235)||(30388850-30388882)
chr6 (203-239)||(31244829-31244865)
chr6 (203-239)||(32359520-32359556)
chr6 (139-235)||(34730689-34730785)
[»] scaffold0886 (1 HSPs)
scaffold0886 (144-235)||(4644-4735)
[»] scaffold0280 (1 HSPs)
scaffold0280 (118-239)||(8279-8400)
[»] scaffold0002 (1 HSPs)
scaffold0002 (118-239)||(148428-148549)
[»] scaffold1213 (1 HSPs)
scaffold1213 (163-239)||(7-83)
[»] scaffold0172 (1 HSPs)
scaffold0172 (130-233)||(26134-26237)
[»] scaffold0024 (1 HSPs)
scaffold0024 (118-231)||(49279-49392)
[»] scaffold0007 (1 HSPs)
scaffold0007 (142-239)||(77213-77310)
[»] scaffold0001 (1 HSPs)
scaffold0001 (140-239)||(419509-419608)
[»] scaffold0040 (1 HSPs)
scaffold0040 (130-235)||(69229-69333)
[»] scaffold0014 (1 HSPs)
scaffold0014 (130-234)||(195594-195698)
[»] scaffold0831 (1 HSPs)
scaffold0831 (144-239)||(2932-3028)
[»] scaffold0471 (1 HSPs)
scaffold0471 (139-235)||(1833-1929)
[»] scaffold0018 (1 HSPs)
scaffold0018 (142-235)||(184146-184239)
[»] scaffold0274 (1 HSPs)
scaffold0274 (139-235)||(255-351)


Alignment Details
Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 3376186 - 3376425
Alignment:
Q  1 cacgtcatccatactgtttagattctaacaatctctaggtctctttcattggcttagcaatgatattcatataattggtcatgggatgaaaaacaggtct 100  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  3376186 cacgtcatccaaactgtttagattctaacaatctctacgtctctttcattggcttagcaatgatattcatataattggtcatgggataaaaaactggtct 3376285  T
Q  101 tgctaactactac-tcaattcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattg 199  Q
    |||| |||||||| ||||||||||||||||||||| || |||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||    
T  3376286 tgctgactactacctcaattcctttttatctgtcacattttgacattttacataaactaagataatcaatgattgttactattttttatgtaataagttg 3376385  T
Q  200 tatttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  3376386 tatttttactataatgaccttattcatttaatatctcatt 3376425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 43775390 - 43775511
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  | ||| || ||||||||||||||||||||| ||| |||||||||||||||| |||| ||| ||||| ||||| |||||||||||||||    
T  43775390 ttcctttttaattttcacattttgacattttacataaaccaagatagtcaatgattgttactacttttgatgcaataagttgtacttttactataatgac 43775489  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  43775490 cttattcatttaatatctcatt 43775511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 33491139 - 33491260
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || |||||||||||||||||| || ||| |||||||||||||||| |||| ||| ||||| || || |||||||||||| ||    
T  33491139 ttcctttttaattgtcacattttgacattttacataaactaagatagtcaatgattgttactacttttgatgcaataagttatacttttactataataac 33491238  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| |||||||||||||||    
T  33491239 cttatttatttaatatctcatt 33491260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 28885899 - 28885803
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||||||||| ||| ||||| |||||||||| |||| ||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||    
T  28885899 acattttacataaaccaagatagtcaattattgttactacttttgatgcaataagttgtacttt-actataatgaccttattcatttaatatctcatt 28885803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 51697575 - 51697685
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgta-tttttactataatgaccttattcattt 228  Q
    |||||||| ||||||||||||| ||||||| | ||||||  |||| |||||||||| ||| |||||  | || |||||||||||||||||||||||||||    
T  51697575 tgtcatattttgacattttacacaaaccaagacaatcaacaattgatactatttttgatgcaataagctatactttttactataatgaccttattcattt 51697674  T
Q  229 aatatctcatt 239  Q
    |||||||||||    
T  51697675 aatatctcatt 51697685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 13158439 - 13158560
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||| |||| ||||||||||||||||||||| | ||| ||  |||| ||||| |||| || |||||| || || |||||||||||||||    
T  13158439 ttcctttttaattgttatattttgacattttacataaaccaagacaataaaaaattgatactacttttgatataataagttatacttttactataatgac 13158538  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||||||||||||| |||||    
T  13158539 cttattcatttaatatatcatt 13158560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 34266440 - 34266561
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||   |||| || ||||||||||||| ||||||| | ||||||  |||| ||||| |||| ||| ||||| || || |||||||||||||||    
T  34266440 ttcctttttaatcgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagttatacttttactataatgac 34266539  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  34266540 cttattcatttaatatctcatt 34266561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 142 - 235
Target Start/End: Original strand, 40139858 - 40139951
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatct 235  Q
    |||||||||| ||||||| | ||||||| |||||||||| |||| ||| ||||| || || |||||||||||||||||||||||||||||||||    
T  40139858 acattttacacaaaccaagacaatcaataattgttactacttttgatgcaataagttatacttttactataatgaccttattcatttaatatct 40139951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 43945625 - 43945504
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||| ||||||||| | ||||||  |||| |||||||||| ||| |||||| | || ||||||| ||||||     
T  43945625 ttcctttttagttgtcacattttgacattttatataaaccaagacaatcaacaattgatactatttttgatgcaataaactatacttttactgtaatgat 43945526  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  43945525 cttattcatttaatatctcatt 43945504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 54106509 - 54106388
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||| | || ||||||||||||||||||||| | ||||||  |||| || || |||| ||| |||||| | || |||||||||||||||    
T  54106509 ttcctttttaattgttacattttgacattttacataaaccaagacaatcaacaattgatattacttttgatgcaataaactatacttttactataatgac 54106410  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  54106409 cttattcatttaatatctcatt 54106388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 54898086 - 54898207
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||||||||||| | ||||||  |||| ||||| |||| ||| |||||  | || ||||| |||||||||    
T  54898086 ttcctttttaattgtcacattttgacattttacataaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttattataatgac 54898185  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  54898186 cttattcatttaatatctcatt 54898207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 234
Target Start/End: Original strand, 53745282 - 53745398
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| ||||||||  |||| ||||| |||| ||| |||||  | || |||||||||||||||    
T  53745282 ttcctttttaattgtcacattttgacattttacacaaaccaagataatcaacaattgatactacttttgatgcaataagctatacttttactataatgac 53745381  T
Q  218 cttattcatttaatatc 234  Q
    |||||||||||||||||    
T  53745382 cttattcatttaatatc 53745398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 19550492 - 19550371
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| |||| || | ||||||  |||| || || |||| ||| |||||  | ||||||||||||||||||    
T  19550492 ttcctttttaattgtcacattttgacattttacacaaactaagacaatcaacaattgatattacttttgatgcaataagctatatttttactataatgac 19550393  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  19550392 cttattcatttaatatctcatt 19550371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 20848724 - 20848845
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    |||||||||| |||||| || ||||||||||||| ||||||||||||||||| | |||||||| |||| ||  |||   || || ||||||||||||| |    
T  20848724 ttcctttttaactgtcacattttgacattttacacaaaccaaaataatcaataaatgttactacttttgatacaattgtttttacttttactataatggc 20848823  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| ||||||||| |||||    
T  20848824 cttattaatttaatatttcatt 20848845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 27483788 - 27483909
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||||| || |||||||| | ||| ||  | ||||||  |||| ||||| |||| ||| ||||| || ||||||||||||||||||    
T  27483788 ttcctttttaattgtcatattttaacattttatacaaatcaggacaatcaacaattgatactacttttgatgcaataagttatatttttactataatgac 27483887  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  27483888 cttattcatttaatatctcatt 27483909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 235
Target Start/End: Complemental strand, 32980886 - 32980769
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| | ||||||| ||||||| || |||| ||| ||||| || || ||||| |||| ||||    
T  32980886 ttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaataattgttaatacttttgatgcaataagttatacttttattatactgac 32980787  T
Q  218 cttattcatttaatatct 235  Q
    ||||||||||||||||||    
T  32980786 cttattcatttaatatct 32980769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 33074278 - 33074399
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||| ||||| || ||||||||||||| ||||||| | ||||||| | || | ||| |||| ||  ||||| || ||||||||||||||| ||    
T  33074278 ttcctttttatttgtcacattttgacattttacacaaaccaagacaatcaataaatgctgctacttttgatacaataatttttatttttactataataac 33074377  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| |||||||||||||||    
T  33074378 cttatttatttaatatctcatt 33074399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 52663676 - 52663567
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    |||||||| ||||||||| ||| ||||||| | ||||||| |||| ||||| |||| ||| |||||  | || |||| ||||||||||||||||||||||    
T  52663676 tgtcatattttgacatttcacacaaaccaagacaatcaataattgatactacttttgatgcaataagctatacttttgctataatgaccttattcattta 52663577  T
Q  230 atatctcatt 239  Q
    ||||||||||    
T  52663576 atatctcatt 52663567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 47104176 - 47104276
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||||||| ||||| ||||||| | ||||||||||||| || ||||  ||| || ||||||||||||||| ||||| ||||||||| ||||    
T  47104176 ttgacattttacataaatcaaaacaatcaataaatgttactatttttgatataattgattttacttttactataatgactttattaatttaatatttcat 47104275  T
Q  239 t 239  Q
    |    
T  47104276 t 47104276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 24981524 - 24981415
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    ||||| || |||||||||| || |||| || ||||||||  |||| ||||| |||| ||| |||||| | || |||||||||||||||||||||||||||    
T  24981524 tgtcacattttgacattttgcacaaactaagataatcaacaattgatactacttttgatgcaataaactatacttttactataatgaccttattcattta 24981425  T
Q  230 atatctcatt 239  Q
    |||| |||||    
T  24981424 atatatcatt 24981415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 27992486 - 27992365
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| || |||| | ||||||  |||| ||||| |||| ||| |||||  | || |||||||||||||||    
T  27992486 ttcctttttaattgtcacattttgacattttacacaacccaatacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgac 27992387  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||||||||||||| |||||    
T  27992386 cttattcatttaatatttcatt 27992365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 35315378 - 35315257
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||| | ||||||||||||| ||| ||| | ||||||  |||||||||| |||| ||| ||||| || || ||||| |||||||||    
T  35315378 ttcctttttaattgtcattttttgacattttacacaaatcaagacaatcaacaattgttactacttttgatgcaataagttatacttttattataatgac 35315279  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||| ||||||||| ||||||||    
T  35315278 cttgttcatttaacatctcatt 35315257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 17102979 - 17102879
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||| |||  |||| ||| ||| |||||||||| |||| ||| ||||| || || ||||| |||||||||||||||||||||| |||||||    
T  17102979 ttgacattttacacaaattaaaacaattaataattgttactacttttgatgcaataatttatacttttattataatgaccttattcatttaacatctcat 17102880  T
Q  239 t 239  Q
    |    
T  17102879 t 17102879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 29458224 - 29458324
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||| ||||||| | ||||||| | |||| ||| |||| ||  ||||| || ||||||||||||||| |||||||| ||||||||||||||    
T  29458224 ttgacattttacacaaaccaagacaatcaataaatgttgctacttttgatacaataatttctatttttactataataaccttatttatttaatatctcat 29458323  T
Q  239 t 239  Q
    |    
T  29458324 t 29458324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 54911346 - 54911418
Alignment:
Q  163 aatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatct 235  Q
    ||||||| |||||||||| |||| ||| ||||| || || |||||||||||||||||||||||||||||||||    
T  54911346 aatcaataattgttactacttttgatgcaataagttatacttttactataatgaccttattcatttaatatct 54911418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 45513673 - 45513736
Alignment:
Q  176 tactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||| |||| ||| |||||| | ||||||||||||||||||||||||||||||||||||||||    
T  45513673 tactacttttgatgcaataaactatatttttactataatgaccttattcatttaatatctcatt 45513736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 29698237 - 29698115
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| |||  || | ||||||  |||| |||||||||| ||| |||||  | || |||||||||||||||    
T  29698237 ttcctttttaattgtcacattttgacattttacacaaattaagacaatcaacaattgatactatttttgatgcaataagctatacttttactataatgac 29698138  T
Q  218 ct-tattcatttaatatctcatt 239  Q
    || ||||||||||||||||||||    
T  29698137 ctctattcatttaatatctcatt 29698115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 47069860 - 47069978
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    |||||||  ||||| || ||||||||||||| ||||||| | ||||||  |||| ||||| |||| ||| ||||| || || |||||||||||| |  ||    
T  47069860 ctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagttatacttttactataataatttt 47069959  T
Q  221 attcatttaatatctcatt 239  Q
    |||||||||||||||||||    
T  47069960 attcatttaatatctcatt 47069978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 29651890 - 29651793
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||| ||||||||| ||||||   ||| ||||| |||| ||| |||||  | || ||||||||||||||| |||||||||||||||||||||    
T  29651890 acattttacacaaaccaaaacaatcaacagttgatactacttttgatgcaataagctatacttttactataatgactttattcatttaatatctcatt 29651793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 40318952 - 40319049
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||| ||||||| ||||||||| | |||| ||| |||| ||  ||||| || |||||||||| |||| |||||||| |||||||||||||||    
T  40318952 acattttacacaaaccaagataatcaataaatgttgctacttttgatacaataatttctatttttactttaataaccttatttatttaatatctcatt 40319049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 41425875 - 41425754
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || || |||||||||| ||||||| | ||||||| | |||| ||| |||| ||  ||||| || |||||||||| |||| ||    
T  41425875 ttcctttttaattgtcacattttaacattttacacaaaccaagacaatcaataaatgttgctacttttgatacaataatttctatttttactttaataac 41425776  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| |||||||||||||||    
T  41425775 cttatttatttaatatctcatt 41425754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 45145374 - 45145253
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||| | |||| |||||||| ||||||| | ||||||| ||| ||| || ||||  || ||||| || || ||||||||||||||     
T  45145374 ttcctttttaattgtcattttttgatattttacacaaaccaagacaatcaataattattattacttttgctgcaataagttatacttttactataatgat 45145275  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||| ||||||||    
T  45145274 cttattcatttaacatctcatt 45145253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 46973648 - 46973548
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    |||| |||||||| ||||||||  ||||||  |||| ||||| |||| ||| ||||| || || ||||| ||||||||||||||||||||||||| ||||    
T  46973648 ttgatattttacacaaaccaaagcaatcaacaattgatactacttttgatgcaataagttatacttttattataatgaccttattcatttaatatatcat 46973549  T
Q  239 t 239  Q
    |    
T  46973548 t 46973548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 234
Target Start/End: Complemental strand, 790775 - 790680
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatc 234  Q
    |||| |||||||| ||||||| | ||||||  |||| ||||| |||| ||| |||||  | || ||||||||||||||||||||||||||||||||    
T  790775 ttgatattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttattcatttaatatc 790680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 118 - 233
Target Start/End: Complemental strand, 29803894 - 29803779
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || |||| ||||||||  |||||| | ||||||  |||| ||||||| || ||| ||||| || || ||||||||||||||     
T  29803894 ttcctttttaattgtcacattttgatattttacacgaaccaagacaatcaacaattgatactattattgatgcaataagttatacttttactataatgat 29803795  T
Q  218 cttattcatttaatat 233  Q
    ||||||||||||||||    
T  29803794 cttattcatttaatat 29803779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 51244867 - 51244749
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    |||||||  ||| |||| |||| |||||||| ||||||| | ||||||  |||| ||||| |||| ||| |||||    |||||||| |||||||| |||    
T  51244867 ctttttacttgtaatattttgatattttacacaaaccaagacaatcaacaattgatactagttttgatgcaataagccatatttttattataatgatctt 51244768  T
Q  221 attcatttaatatctcatt 239  Q
    |||||||||||||||||||    
T  51244767 attcatttaatatctcatt 51244749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 235
Target Start/End: Original strand, 27039606 - 27039723
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    |||||||||| | ||||  | ||||||||||||| ||||||| | | ||||| | ||||||| ||| ||||  ||||| | ||| ||||||||||||  |    
T  27039606 ttcctttttaaccgtcactttttgacattttacacaaaccaagacattcaataaatgttactttttcttatacaataattagtacttttactataatagc 27039705  T
Q  218 cttattcatttaatatct 235  Q
    ||||||||||||||||||    
T  27039706 cttattcatttaatatct 27039723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 42671902 - 42672007
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    ||||| || ||||||||||| |||||| || | ||||||  |||| || || |||| ||| |||||| | || |||||||||||| ||||||||||||||    
T  42671902 tgtcacattttgacattttatataaactaagacaatcaacaattgatattacttttgatgcaataaactatacttttactataataaccttattcattta 42672001  T
Q  230 atatct 235  Q
    ||||||    
T  42672002 atatct 42672007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 45101358 - 45101479
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| | ||||||    || | ||| |||| ||| |||||  | || |||| ||||||||||    
T  45101358 ttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacagctgatgctacttttgatgcaataagctatacttttcctataatgac 45101457  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  45101458 cttattcatttaatatctcatt 45101479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 39866870 - 39866970
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||| ||||||| | ||||||| ||||||  || |||| ||| ||||| || |  |||||||||||||||||| || |||||| |||||||    
T  39866870 ttgacattttacacaaaccaagacaatcaataattgtttttacttttgatgcaataagttatgcttttactataatgaccttgttaatttaacatctcat 39866969  T
Q  239 t 239  Q
    |    
T  39866970 t 39866970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 121 - 233
Target Start/End: Complemental strand, 43554632 - 43554520
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    |||||||  ||||| || ||||||||||||| ||||||| | ||||||  |||| |  || |||| ||| |||||  | || ||||||||||||||||||    
T  43554632 ctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatcatacttttgatgcaataagctatacttttactataatgacctt 43554533  T
Q  221 attcatttaatat 233  Q
    |||||||||||||    
T  43554532 attcatttaatat 43554520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 49123684 - 49123648
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||||||||||||||||||||||||||||    
T  49123684 ttttactataatgaccttattcatttaatatctcatt 49123648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 234
Target Start/End: Original strand, 52627238 - 52627354
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || |||||||||| |  | ||||| ||||| || ||||| || || |||| ||| ||||| || || |||||||||||||||    
T  52627238 ttcctttttaattgtcacattttgacattttcctcataccaagataattaacgattgatattacttttgatgcaataagttatacttttactataatgac 52627337  T
Q  218 cttattcatttaatatc 234  Q
     ||||||||||||||||    
T  52627338 tttattcatttaatatc 52627354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 239
Target Start/End: Original strand, 41351220 - 41351315
Alignment:
Q  144 attttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||| ||| | | ||||| | |||||||| |||| || ||||||  | || |||||||||||| |||||||||||||||||| |||||    
T  41351220 attttacataaatcaagacattcaattaatgttactacttttgatataataatatatacttttactataataaccttattcatttaatatttcatt 41351315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 239
Target Start/End: Original strand, 3643195 - 3643317
Alignment:
Q  117 attcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatga 216  Q
    |||||||||||  |||||  | ||||||||||||| ||| ||| | ||||||  | |||||||| |||| ||  ||| | || || ||||||||||||||    
T  3643195 attcctttttaagtgtcactttttgacattttacacaaatcaatacaatcaagaaatgttactacttttgatacaattatttttacttttactataatga 3643294  T
Q  217 ccttattcatttaatatctcatt 239  Q
    ||||||| ||||||||| |||||    
T  3643295 ccttattaatttaatatttcatt 3643317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 6902521 - 6902403
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    ||||||| |||||| || |||| |||||||| ||||||| |  |||||  |||| |||||  ||| ||| |||||  | || ||||||||||||||||||    
T  6902521 ctttttaactgtcacattttgatattttacacaaaccaagaccatcaacaattgatactacatttgatgcaataagctataattttactataatgacctt 6902422  T
Q  221 attcatttaatatctcatt 239  Q
    ||| ||||||||| |||||    
T  6902421 atttatttaatatttcatt 6902403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 41926903 - 41926803
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactatt---ttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    |||||||||| ||||||| | ||||||| |||||||||| |   ||| ||| ||||| || || ||||||||| |||| ||||||||||||| |||||||    
T  41926903 acattttacacaaaccaagacaatcaataattgttactactacttttgatgcaataagttatacttttactatgatgatcttattcatttaacatctcat 41926804  T
Q  239 t 239  Q
    |    
T  41926803 t 41926803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 235
Target Start/End: Original strand, 5243936 - 5244052
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    |||||||||| ||||||| | ||||||||||||||||| ||  | | ||||| | ||||||| ||| ||||  ||| | || || |||||||||||| ||    
T  5243936 ttcctttttaactgtcattt-ttgacattttacataaatcaggacactcaataaatgttactttttcttatacaatcatttatacttttactataataac 5244034  T
Q  218 cttattcatttaatatct 235  Q
    |||| |||||||||||||    
T  5244035 cttagtcatttaatatct 5244052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 235
Target Start/End: Original strand, 8236895 - 8237012
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    |||||||||| ||| || || ||||||||||| ||||| ||||| | || || | ||| |||| ||||  | |||||| || || |||||||||||| ||    
T  8236895 ttcctttttaactgacacattttgacattttatataaatcaaaaaagtccataaatgtaactacttttgttataataatttatacttttactataataac 8236994  T
Q  218 cttattcatttaatatct 235  Q
    ||| ||||||||||||||    
T  8236995 cttgttcatttaatatct 8237012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 33874546 - 33874667
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||| | ||||||||||||| ||||||||| ||||||| | |||||||| |||| ||  |||   ||    ||||||||||||| |    
T  33874546 ttcctttttaattgtcattttttgacattttacacaaaccaaaacaatcaataaatgttactacttttgatacaattgttttaccttttactataatggc 33874645  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| ||||||||| |||||    
T  33874646 cttattaatttaatatttcatt 33874667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 206 - 239
Target Start/End: Complemental strand, 41168919 - 41168886
Alignment:
Q  206 tactataatgaccttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||||||||||||||    
T  41168919 tactataatgaccttattcatttaatatctcatt 41168886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 11473627 - 11473531
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatct 235  Q
    ||||||||||||| |||| || | | ||||| | ||||||| ||| ||||  ||||| || || |||||||||||| |||||| |||||||||||||    
T  11473627 ttgacattttacacaaactaagacattcaataaatgttactttttcttatacaataatttatacttttactataataaccttagtcatttaatatct 11473531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 25983684 - 25983783
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||| |||  || |||||| |  ||||||||||||||| ||| ||||| || || ||||||||||||||| || |||||||||  ||||||    
T  25983684 ttgacattttacacaaattaagataatctacaattgttactatttttgatg-aataagttatacttttactataatgactttgttcatttaacttctcat 25983782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 40010685 - 40010781
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatct 235  Q
    |||| |||||||| ||||||| | | ||||| | ||||||| ||| ||||  ||||| | ||| |||||||||||| |||||| |||||||||||||    
T  40010685 ttgatattttacacaaaccaagacactcaataaatgttactttttcttatacaataattagtacttttactataataaccttagtcatttaatatct 40010781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 55141561 - 55141597
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||| ||||||||||||||||||||||||    
T  55141561 ttttactataataaccttattcatttaatatctcatt 55141597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 239
Target Start/End: Original strand, 24086 - 24185
Alignment:
Q  140 tgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||||||||||| | | | ||| | | |||||| |||| ||  |||||  | || |||||||||||| |||||||||||||||||| |||||    
T  24086 tgacattttacataaaccaagacatttaataaatattactacttttgatacaataatatatacttttactataataaccttattcatttaatatttcatt 24185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 233
Target Start/End: Original strand, 32853969 - 32854063
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatat 233  Q
    ||||||||||||| ||||||| | | ||||| | ||||||| ||| ||||  |||||  | || |||||||||||| |||||| |||||||||||    
T  32853969 ttgacattttacacaaaccaagacactcaataaatgttactttttcttatacaataatgtatacttttactataataaccttagtcatttaatat 32854063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 36370863 - 36370948
Alignment:
Q  153 aaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||| | ||||||| | |||| ||| |||| ||  ||||| || |||||||||| |||| |||||||| ||||||||||||||    
T  36370863 aaaccaagacaatcaataaatgttgctacttttgatacaataatttctatttttactttaataaccttatttatttaatatctcat 36370948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 235
Target Start/End: Complemental strand, 50092191 - 50092074
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    |||||||||| |||||   | ||||||||||||| ||||||| | | | ||| | ||||| | ||| ||||  ||||| || || |||||||||||| ||    
T  50092191 ttcctttttaactgtcgctttttgacattttacacaaaccaagacactaaataaatgttattttttcttatacaataatttatacttttactataataac 50092092  T
Q  218 cttattcatttaatatct 235  Q
    |||| |||||||||||||    
T  50092091 cttagtcatttaatatct 50092074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 32853381 - 32853481
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||| |||| || | ||||||| | |||||||| |||| ||  |||   || || ||||||||||| ||||||||| ||||||||| ||||    
T  32853381 ttgacattttacacaaactaagacaatcaataaatgttactacttttgatacaattgtttttacttttactataacgaccttattaatttaatatttcat 32853480  T
Q  239 t 239  Q
    |    
T  32853481 t 32853481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 44544112 - 44544148
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  44544112 ttttactataataacctttttcatttaatatctcatt 44544148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 48152146 - 48152110
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  48152146 ttttactataataaccttattcatttgatatctcatt 48152110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 8e-39; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 12342608 - 12342729
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||||| ||||||||||||||||||||| ||| |||||||||||||||| |||| ||| ||||| ||||| |||||||||||||||    
T  12342608 ttcctttttaattgtcatattttgacattttacataaaccaagatagtcaatgattgttactacttttgatgcaataagttgtacttttactataatgac 12342707  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  12342708 cttattcatttaatatctcatt 12342729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 10180613 - 10180495
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    |||||||  |||||||| ||||||||||||||||| ||| ||| |||||||||||||||| |||| ||| ||||| ||||| ||||||||||||||||||    
T  10180613 ctttttaattgtcatattttgacattttacataaatcaagatagtcaatgattgttactacttttgatgcaataagttgtacttttactataatgacctt 10180514  T
Q  221 attcatttaatatctcatt 239  Q
    |||||||||||||||||||    
T  10180513 attcatttaatatctcatt 10180495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 33314790 - 33314669
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||  || ||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||| ||||  |||||||||||||||    
T  33314790 ttcctttttaattgtcgcattttgacattttacataaaccaatatagtcaatgattgttactattttttatgcaataagttgtccttttactataatgac 33314691  T
Q  218 cttattcatttaatatctcatt 239  Q
     |||||||||||||||||||||    
T  33314690 tttattcatttaatatctcatt 33314669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 21651743 - 21651861
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    |||||||  ||||| || ||||||||||||||||||||| |||  ||||||| ||||||| |||| ||| ||||| ||||| ||||||||||||||||||    
T  21651743 ctttttaattgtcacattttgacattttacataaaccaagatagccaatgatcgttactacttttgatgcaataacttgtacttttactataatgacctt 21651842  T
Q  221 attcatttaatatctcatt 239  Q
    |||||||||||||||||||    
T  21651843 attcatttaatatctcatt 21651861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 36058478 - 36058357
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||  || |||||||||||||||||  |||||| |||||||||||||||| |||| ||| ||||| ||||| ||||||||||||||     
T  36058478 ttcctttttaattgtcgcattttgacattttacataaattaaaatagtcaatgattgttactacttttgatgcaataagttgtacttttactataatgat 36058379  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  36058378 cttattcatttaatatctcatt 36058357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 27518728 - 27518828
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||||||||||| ||| |||||||||||||||| |||||||| ||||| ||||| | ||||||||||||| ||||| ||||||||||||||    
T  27518728 ttgacattttacataaaccaatatagtcaatgattgttactactttttatgcaataagttgtactgttactataatgactttatttatttaatatctcat 27518827  T
Q  239 t 239  Q
    |    
T  27518828 t 27518828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 233
Target Start/End: Original strand, 2456130 - 2456224
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatat 233  Q
    ||||||||||||||||| ||| ||| |||||||||||||||| |||| ||| ||||| ||||| |||||||||||||||||||||||||||||||    
T  2456130 ttgacattttacataaatcaatatagtcaatgattgttactacttttgatgcaataagttgtacttttactataatgaccttattcatttaatat 2456224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 118 - 235
Target Start/End: Complemental strand, 15596590 - 15596473
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| ||||||||| ||||||| || |||||||| ||||| || || |||||||||||| ||    
T  15596590 ttcctttttaattgtcacattttgacattttacacaaaccaagataatcaataattgttattactttttatgcaataagttatacttttactataataac 15596491  T
Q  218 cttattcatttaatatct 235  Q
    ||||||||||||||||||    
T  15596490 cttattcatttaatatct 15596473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 18291709 - 18291588
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||| ||| ||| |||||||||||||||| |||| ||| ||||| || || |||||||||||||||    
T  18291709 ttcctttttaattgtcacattttgacattttacaaaaatcaagatagtcaatgattgttactacttttgatgcaataagttatacttttactataatgac 18291610  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||||||||||||| |||||    
T  18291609 cttattcatttaatatttcatt 18291588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 239
Target Start/End: Complemental strand, 26062954 - 26062832
Alignment:
Q  117 attcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatga 216  Q
    |||||||||||  ||||| || ||||||||||||| ||| ||| ||||||||  |||| ||||| |||| ||| |||||  | |||||||||||||||||    
T  26062954 attcctttttaattgtcacattttgacattttacacaaatcaagataatcaacaattgatactacttttgatgcaataagctatatttttactataatga 26062855  T
Q  217 ccttattcatttaatatctcatt 239  Q
    |||||||||||||||||||||||    
T  26062854 ccttattcatttaatatctcatt 26062832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 235
Target Start/End: Original strand, 8453230 - 8453347
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| |||| || ||||||||| |||||||||| |||| ||| |||||||| || ||||| |||||||||    
T  8453230 ttcctttttaattgtcacattttgacattttacacaaactaagataatcaataattgttactacttttgatgcaataaattatacttttattataatgac 8453329  T
Q  218 cttattcatttaatatct 235  Q
     |||||||||||||||||    
T  8453330 attattcatttaatatct 8453347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 33935054 - 33935175
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| | ||||||| |||| ||||| |||| ||| |||||  | || |||||||||||||||    
T  33935054 ttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaataattgatactacttttgatgcaataagctataattttactataatgac 33935153  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  33935154 cttattcatttaatatctcatt 33935175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 34047095 - 34046976
Alignment:
Q  120 cctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacct 219  Q
    ||||||||  ||||| || ||||||||||||| ||||||| |  |||||  |||| |||||||||| ||| |||||| | || |||||||||||||||||    
T  34047095 cctttttaattgtcacattttgacattttacacaaaccaagaatatcaacaattgatactatttttgatgcaataaactatacttttactataatgacct 34046996  T
Q  220 tattcatttaatatctcatt 239  Q
    ||||||||||||||||||||    
T  34046995 tattcatttaatatctcatt 34046976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 239
Target Start/End: Complemental strand, 9954896 - 9954774
Alignment:
Q  117 attcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatga 216  Q
    |||||||||||  |||||||| || |||||||||||||||||| | ||||||  |||| || || |||| ||| ||||| || || |||||| |||||||    
T  9954896 attcctttttaattgtcatattttaacattttacataaaccaagacaatcaacaattgatattacttttgatgcaataagttatacttttaccataatga 9954797  T
Q  217 ccttattcatttaatatctcatt 239  Q
    |||||||||||||||||||||||    
T  9954796 ccttattcatttaatatctcatt 9954774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 239
Target Start/End: Complemental strand, 40228542 - 40228420
Alignment:
Q  117 attcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatga 216  Q
    |||||||||||  ||||| || ||||| ||||||| ||||||| | ||||||  |||| |||||||||| ||| |||||  |||| ||||||||||||||    
T  40228542 attcctttttaattgtcacattttgacgttttacacaaaccaagacaatcaacaattgatactatttttgatgcaataagctgtacttttactataatga 40228443  T
Q  217 ccttattcatttaatatctcatt 239  Q
    ||||||||||||||||| |||||    
T  40228442 ccttattcatttaatatgtcatt 40228420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 18842775 - 18842654
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||| ||| ||||||||| | |||||||| |||| ||  ||||| || ||||||||||||||| ||    
T  18842775 ttcctttttaattgtcacattttgacattttacacaaatcaagataatcaataaatgttactacttttgatacaataatttttatttttactataataac 18842676  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| |||||||||||||||    
T  18842675 cttatttatttaatatctcatt 18842654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 235
Target Start/End: Original strand, 23848550 - 23848667
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||| ||| ||||||| | ||||||| |||| ||||| |||| ||| |||||| | |||||||| |||||||||    
T  23848550 ttcctttttaattgtcacattttgacatttgacacaaaccaagacaatcaataattgatactacttttgatgcaataaactatatttttattataatgac 23848649  T
Q  218 cttattcatttaatatct 235  Q
    ||||||||||||||||||    
T  23848650 cttattcatttaatatct 23848667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 35052299 - 35052178
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| | ||||||  |||| |||||||||| ||| |||||  | || |||||||||||||||    
T  35052299 ttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactatttttgatgcaataagctatacttttactataatgac 35052200  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| |||||||||||||||    
T  35052199 cttatttatttaatatctcatt 35052178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 121 - 235
Target Start/End: Complemental strand, 41308139 - 41308024
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttat-gtaataaattgtatttttactataatgacct 219  Q
    |||||||  |||||||| ||||||||||||||| ||||| | ||| ||| |||||||||| |||| || | ||||| || || |||||||||||||||||    
T  41308139 ctttttaattgtcatattttgacattttacatataccaagacaattaataattgttactacttttgattgcaataagttatacttttactataatgacct 41308040  T
Q  220 tattcatttaatatct 235  Q
    ||||||||||||||||    
T  41308039 tattcatttaatatct 41308024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 1202434 - 1202555
Alignment:
Q  114 tcaattcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataa 213  Q
    |||||| |||||||  ||||| || || |||||||||| ||| ||| | ||||||  |||| |||||||||| ||| ||||| || || |||||||||||    
T  1202434 tcaatttctttttaattgtcacattttaacattttacacaaatcaagacaatcaacaattgatactatttttgatgcaataagttatacttttactataa 1202533  T
Q  214 tgaccttattcatttaatatct 235  Q
    ||||||||||||||||||||||    
T  1202534 tgaccttattcatttaatatct 1202555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 1245558 - 1245437
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||  | ||||||||||||||||| ||| | ||||||| |||||||||| |||| ||  ||||| || || |||||||||||||||    
T  1245558 ttcctttttaattgtcactttttgacattttacataaatcaagacaatcaataattgttactacttttgattcaataagttatacttttactataatgac 1245459  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||||||||||  |||||||    
T  1245458 cttattcatttaaattctcatt 1245437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 14263778 - 14263669
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    ||||| || ||||||||||||| ||||||| | ||||||  |||| || || |||| ||| ||||| || || |||||||||||||||||||||||||||    
T  14263778 tgtcacattttgacattttacacaaaccaagacaatcaacaattgatattacttttgatgcaataagttatacttttactataatgaccttattcattta 14263679  T
Q  230 atatctcatt 239  Q
    ||||||||||    
T  14263678 atatctcatt 14263669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 34982075 - 34981954
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || |||| |||||||| ||||||||| ||||||  |||  ||||| |||| ||| |||||  | || |||||||||||||||    
T  34982075 ttcctttttaattgtcacattttgatattttacacaaaccaaaacaatcaacaattaatactacttttgatgcaataagctatacttttactataatgac 34981976  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  34981975 cttattcatttaatatctcatt 34981954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 38482786 - 38482907
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || |||| |||||||| ||||||| | ||||||  |||| ||||| |||| ||| |||||  | || |||||||||||||||    
T  38482786 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgac 38482885  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  38482886 cttattcatttaatatctcatt 38482907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 235
Target Start/End: Original strand, 43641983 - 43642100
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||  | ||||||||||||| |||| || | ||||||| |||||||||| |||| ||| |||||||| || |||||||||||||||    
T  43641983 ttcctttttaattgtcactttttgacattttacacaaactaagacaatcaataattgttactacttttgatgcaataaattatacttttactataatgac 43642082  T
Q  218 cttattcatttaatatct 235  Q
    ||||||| ||||| ||||    
T  43642083 cttattcttttaacatct 43642100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 14228328 - 14228437
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    ||||| || ||||||||||||| ||||||| | ||||||  |||| ||||| |||| |||| ||||  | || |||||||||||||||||||||||||||    
T  14228328 tgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgtcataagctatacttttactataatgaccttattcattta 14228427  T
Q  230 atatctcatt 239  Q
    |||| |||||    
T  14228428 atatttcatt 14228437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 17074576 - 17074697
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || || |||||||||| ||||||| | ||||||| | | || ||| |||| ||| ||||| || ||||||||||||||| ||    
T  17074576 ttcctttttaattgtcacattttaacattttacacaaaccaagacaatcaataaatattgctacttttgatgcaataatttttatttttactataataac 17074675  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| |||||||||||||||    
T  17074676 cttatttatttaatatctcatt 17074697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 17573694 - 17573573
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || || |||||||||| ||||||| | ||||||| | | || ||| |||| ||| ||||| || ||||||||||||||| ||    
T  17573694 ttcctttttaattgtcacattttaacattttacacaaaccaagacaatcaataaatattgctacttttgatgcaataatttttatttttactataataac 17573595  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| |||||||||||||||    
T  17573594 cttatttatttaatatctcatt 17573573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 38128541 - 38128662
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||| | || ||||||||||| | ||||||| | ||||||  |||| ||||| |||| ||| |||||  | || |||||||||||||||    
T  38128541 ttcctttttaattgttacattttgacattttatacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgac 38128640  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  38128641 cttattcatttaatatctcatt 38128662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 142 - 234
Target Start/End: Original strand, 45281396 - 45281488
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatc 234  Q
    |||||||||| ||||||| ||||||||  |||| ||||| |||| ||| |||||| | || |||||||||||| |||||||||||||||||||    
T  45281396 acattttacacaaaccaagataatcaacaattgatactacttttgatgcaataaactatacttttactataatcaccttattcatttaatatc 45281488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 235
Target Start/End: Complemental strand, 16656943 - 16656829
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    |||||||  ||||| || ||||||||||||| ||||||| | | ||||  |||| ||||| |||| ||| |||||| | || |||||||||||||| |||    
T  16656943 ctttttaattgtcacattttgacattttacacaaaccaagacactcaacaattgatactaattttgatgcaataaactatacttttactataatgaactt 16656844  T
Q  221 attcatttaatatct 235  Q
    |||||||||||||||    
T  16656843 attcatttaatatct 16656829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 239
Target Start/End: Complemental strand, 23430156 - 23430034
Alignment:
Q  117 attcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatga 216  Q
    |||||||||||   |||| || || |||||||||| ||| ||| | ||||||  |||| ||||| |||| ||| |||||  | || ||||||||||||||    
T  23430156 attcctttttaatcgtcacattttaacattttacacaaatcaagacaatcaacaattgatactacttttgatgcaataagctatacttttactataatga 23430057  T
Q  217 ccttattcatttaatatctcatt 239  Q
    |||||||||||||||||||||||    
T  23430056 ccttattcatttaatatctcatt 23430034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 235
Target Start/End: Original strand, 39303509 - 39303627
Alignment:
Q  118 ttccttttta-tctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatga 216  Q
    |||||||||| | ||||| || ||||||||||||| ||| ||| | ||||||  |||| ||||| |||| ||| |||||  | || ||||||||||||||    
T  39303509 ttcctttttaatttgtcacattttgacattttacacaaatcaagacaatcaacaattgatactacttttgatgcaataagctatacttttactataatga 39303608  T
Q  217 ccttattcatttaatatct 235  Q
    |||||||||||||||||||    
T  39303609 ccttattcatttaatatct 39303627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 2888462 - 2888583
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || || |||||||||| ||||||| | ||||||| | |||| ||| |||| ||  ||||| || |||||||||| |||| ||    
T  2888462 ttcctttttaattgtcacattttaacattttacacaaaccaagacaatcaataaatgttgctacttttgatacaataatttctatttttactttaataac 2888561  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| |||||||||||||||    
T  2888562 cttatttatttaatatctcatt 2888583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 4057534 - 4057413
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| | ||| ||  |||| ||||| ||||||||  ||||  | || ||||||||||||||     
T  4057534 ttcctttttaattgtcacattttgacattttacacaaaccaagacaattaacaattgatactactttttatgccataagctatacttttactataatgat 4057435  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| |||||||||||||||    
T  4057434 cttattaatttaatatctcatt 4057413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 8672740 - 8672619
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||| | |||| |||||||| ||||||||||||||||| | ||||| ||||||| ||  |||   || || |||||||||||||||    
T  8672740 ttcctttttaattgtcattttttgatattttacacaaaccaaaataatcaataaatgttattatttttgatacaattgtttttacttttactataatgac 8672641  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| ||||| ||| |||||    
T  8672640 cttatttatttactatttcatt 8672619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 32010102 - 32010199
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||| || ||||||| | ||||||| |||| ||||| |||| ||| ||||| || || |||||||||||||||||| ||||||||| ||||||||    
T  32010102 acatttttcacaaaccaagacaatcaataattgctactacttttgatgcaataatttatacttttactataatgaccttgttcatttaacatctcatt 32010199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 233
Target Start/End: Original strand, 25703575 - 25703687
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    |||||||  ||||| || ||||||||||||| ||| ||| ||||||||  |||  ||||| |||||||| |||||  | || |||||||||||||| |||    
T  25703575 ctttttaattgtcacattttgacattttacacaaaacaagataatcaacaattaatactactttttatgcaataagctatacttttactataatgatctt 25703674  T
Q  221 attcatttaatat 233  Q
    |||||||||||||    
T  25703675 attcatttaatat 25703687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 233
Target Start/End: Original strand, 25812746 - 25812858
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    |||||||  ||||| || ||||||||||||| ||| ||| ||||||||  |||  ||||| |||||||| |||||  | || |||||||||||||| |||    
T  25812746 ctttttaattgtcacattttgacattttacacaaaacaagataatcaacaattaatactactttttatgcaataagctatacttttactataatgaactt 25812845  T
Q  221 attcatttaatat 233  Q
    |||||||||||||    
T  25812846 attcatttaatat 25812858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 118 - 233
Target Start/End: Complemental strand, 11994127 - 11994012
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||| ||| | ||| ||  |||| ||||| |||| ||| |||||  | || |||||||||||||||    
T  11994127 ttcctttttaattgtcacattttgacattttacacaaatcaagacaataaacaattgatactacttttgatgcaataagctatacttttactataatgac 11994028  T
Q  218 cttattcatttaatat 233  Q
    ||||||||||||||||    
T  11994027 cttattcatttaatat 11994012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 15623664 - 15623722
Alignment:
Q  177 actattttttatgtaataaattgtatttttactataatgaccttattcatttaatatct 235  Q
    ||||||||| ||||||||| || || ||||||||||||||| |||||||||||||||||    
T  15623664 actatttttgatgtaataagttatacttttactataatgacattattcatttaatatct 15623722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 177 - 235
Target Start/End: Original strand, 15647452 - 15647510
Alignment:
Q  177 actattttttatgtaataaattgtatttttactataatgaccttattcatttaatatct 235  Q
    ||||||||| ||||||||| || || ||||||||||||||| |||||||||||||||||    
T  15647452 actatttttgatgtaataagttatacttttactataatgacattattcatttaatatct 15647510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 8554022 - 8554131
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    ||||| || ||||||||||||| ||| ||| | ||||||| | |||| ||| |||| ||  ||||| || ||||||||||||||| |||||||| |||||    
T  8554022 tgtcacattttgacattttacacaaatcaagacaatcaataaatgttgctacttttgatacaataatttttatttttactataataaccttatttattta 8554121  T
Q  230 atatctcatt 239  Q
    | ||||||||    
T  8554122 acatctcatt 8554131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 235
Target Start/End: Complemental strand, 13174175 - 13174058
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    |||||||||| ||||||  | ||||||||||||| ||||||| | | ||||| | ||||||| ||| ||||  ||||| | ||| ||||||||||||  |    
T  13174175 ttcctttttaactgtcactttttgacattttacacaaaccaagacactcaataaatgttactttttcttatacaataattagtacttttactataatagc 13174076  T
Q  218 cttattcatttaatatct 235  Q
    |||| |||||||||||||    
T  13174075 cttagtcatttaatatct 13174058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 224
Target Start/End: Complemental strand, 17313367 - 17313282
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattc 224  Q
    ||||||| |||||||||| || ||| ||||| ||||||| || |||| ||| ||||| || || ||||||||||||||||||||||    
T  17313367 ttgacatcttacataaacgaagatagtcaattattgttattacttttgatgcaataagttctacttttactataatgaccttattc 17313282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 23855803 - 23855682
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||   ||||| | ||||||||||||||||||||| | ||||||| | | |||||| |||| ||  ||||  |  || |||||||||||| ||    
T  23855803 ttcctttttaatcgtcattttttgacattttacataaaccaatacaatcaataaatattactacttttgatacaatacgtcatacttttactataataac 23855704  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| |||||||||||||||    
T  23855703 cttatttatttaatatctcatt 23855682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 40603869 - 40603966
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||| | ||| ||| | ||||||  |||| |||||||||| |||||||||| |  | ||||||||| ||||||||||||||||||||| |||||    
T  40603869 acattttatacaaatcaagacaatcaacaattgatactatttttgatgtaataaactaaacttttactatgatgaccttattcatttaatatttcatt 40603966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 239
Target Start/End: Complemental strand, 3513517 - 3513482
Alignment:
Q  204 tttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||||||||||||||||    
T  3513517 tttactataatgaccttattcatttaatatctcatt 3513482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 9808026 - 9808089
Alignment:
Q  176 tactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||| |||| ||| ||||| || || ||||| |||||||||||||||||||||||||||||||    
T  9808026 tactacttttgatgcaataagttatacttttattataatgaccttattcatttaatatctcatt 9808089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 39615450 - 39615567
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    |||||||  ||||| || |||| |||||||||||||||| | ||| ||| || |||  || |||| ||  ||||| || ||||||||||||||| |||||    
T  39615450 ctttttaattgtcacattttgatattttacataaaccaagacaattaataat-gttgttacttttgatacaataatttttatttttactataataacctt 39615548  T
Q  221 attcatttaatatctcatt 239  Q
    ||| |||||||||||||||    
T  39615549 atttatttaatatctcatt 39615567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 239
Target Start/End: Complemental strand, 17718721 - 17718628
Alignment:
Q  146 tttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||| ||||||| | ||||||| ||||||||||||||| ||  |||   || || ||||||||||||| ||||||| ||||||||| |||||    
T  17718721 tttacacaaaccaagacaatcaataattgttactatttttgatacaattgtttttacttttactataatggccttattaatttaatatttcatt 17718628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 9687529 - 9687625
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatct 235  Q
    ||||||||||||| ||| ||| |||  |||| | ||||||| ||| ||||  ||||| || || |||||||||||| |||||| |||||||||||||    
T  9687529 ttgacattttacacaaatcaagatacgcaataaatgttactttttcttatacaataatttatacttttactataataaccttagtcatttaatatct 9687625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 14511445 - 14511545
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    |||| |||||||| ||||||| | ||| ||| | ||||||||||||| ||  |||   || || ||||||||||||||||||||| ||||||||| ||||    
T  14511445 ttgaaattttacacaaaccaagacaattaataaatgttactatttttgatacaattgtttttacttttactataatgaccttattaatttaatatttcat 14511544  T
Q  239 t 239  Q
    |    
T  14511545 t 14511545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 23793265 - 23793390
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaa----taatcaatgattgttactattttttatgtaataaattgtatttttactataa 213  Q
    ||||||||||  |||||| | || |||||||||| ||||||| |    |||| ||| | ||||||||||||| ||  ||| | || || |||||||||||    
T  23793265 ttcctttttaattgtcattttttaacattttacacaaaccaagacaattaataaataaatgttactatttttgatacaattatttttacttttactataa 23793364  T
Q  214 tgaccttattcatttaatatctcatt 239  Q
    |||||||||| ||||||||| |||||    
T  23793365 tgaccttattaatttaatatttcatt 23793390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 36111956 - 36112052
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatct 235  Q
    ||||||||||||| ||||||| | | ||||| | ||||||| ||| ||||  |||||  | || |||||||||||| |||||| |||||||||||||    
T  36111956 ttgacattttacacaaaccaagacactcaataaatgttactttttcttatacaataatctatacttttactataataaccttagtcatttaatatct 36112052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 41643505 - 41643601
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatct 235  Q
    ||||||||||||| ||||||| | | ||||| | |||||||| |||| || ||||||||| |  |||| | ||||| |||| |||||||||||||||    
T  41643505 ttgacattttacacaaaccaataaagtcaataaatgttactacttttgatataataaattatccttttccaataataacctcattcatttaatatct 41643601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 43553263 - 43553164
Alignment:
Q  140 tgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||  ||||||| | ||||||| | |||||||| |||| ||  ||||| |  || ||||||||||||  ||||||||||||||||| |||||    
T  43553263 tgacattttacgcaaaccaagacaatcaataaatgttactacttttgatacaataattgatacttttactataatatccttattcatttaatatttcatt 43553164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 239
Target Start/End: Complemental strand, 13327938 - 13327904
Alignment:
Q  205 ttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||||||||||||||| |||||||||||||||    
T  13327938 ttactataatgaccttatttatttaatatctcatt 13327904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 235
Target Start/End: Complemental strand, 6757652 - 6757535
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    |||||||||  ||||||  | ||||||||||||| ||| ||| | | ||||| | ||||||| ||| |||| |||||| || || ||||||||||||       
T  6757652 ttccttttttactgtcactttttgacattttacacaaatcaagacactcaataaatgttactttttcttatataataatttatacttttactataatagt 6757553  T
Q  218 cttattcatttaatatct 235  Q
    |||| |||||||||||||    
T  6757552 cttagtcatttaatatct 6757535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 11707555 - 11707596
Alignment:
Q  194 aaattgtatttttactataatgaccttattcatttaatatct 235  Q
    ||||| || ||||||||||||||| |||||||||||||||||    
T  11707555 aaattatacttttactataatgactttattcatttaatatct 11707596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 15281625 - 15281504
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||| || | ||||||| || |||||||||| || |||||| | |||| ||| |||||||  ||||| || |||||||| ||||||       
T  15281625 ttcctttttaattgttattttttgacatattgcataaaccaagatcatcaataaatgttgctactttttatacaataatttatatttttattataatagt 15281526  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||| ||||| |||||||||||    
T  15281525 cttagtcattcaatatctcatt 15281504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 15461994 - 15461873
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||| || | ||||||| || |||||||||| || |||||| | |||| ||| |||||||  ||||| || |||||||| ||||||       
T  15461994 ttcctttttaattgttattttttgacatattgcataaaccaagatcatcaataaatgttgctactttttatacaataatttatatttttattataatagt 15461895  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||| ||||| |||||||||||    
T  15461894 cttagtcattcaatatctcatt 15461873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 26740131 - 26740252
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||  | ||||||||||||| ||||||| | ||||||| | |||||||| |||| ||  |||   || || ||||||||||||  |    
T  26740131 ttcctttttaattgtcactttttgacattttacacaaaccaagacaatcaataagtgttactacttttgatacaattgtttttacttttactataatagc 26740230  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| ||||||||| |||||    
T  26740231 cttattaatttaatatttcatt 26740252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 235
Target Start/End: Complemental strand, 35296290 - 35296173
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    |||||||||| ||||||  | |||| |||||||| ||||||| | | ||||| | ||||| | ||| ||||  ||||| | ||| ||||||||||||  |    
T  35296290 ttcctttttaactgtcactttttgatattttacacaaaccaagacactcaataaatgttattttttcttatacaataattagtacttttactataatagc 35296191  T
Q  218 cttattcatttaatatct 235  Q
    |||| |||||||||||||    
T  35296190 cttaatcatttaatatct 35296173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 235
Target Start/End: Complemental strand, 38222058 - 38221941
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    |||||||||| | ||||  | |||||| |||||| ||||||| | | ||||| | ||||| | ||| |||| |||||| || || ||||||||||||  |    
T  38222058 ttcctttttaacggtcactttttgacactttacacaaaccaagacattcaataaatgttattttttcttatataataatttatacttttactataatagc 38221959  T
Q  218 cttattcatttaatatct 235  Q
    |||| |||||||||||||    
T  38221958 cttagtcatttaatatct 38221941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 167556 - 167592
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||| |||||||| |||||||||||||||    
T  167556 ttttactataataaccttattaatttaatatctcatt 167592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 12248849 - 12248885
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||| |||||||||||||||||| |||||    
T  12248849 ttttactataataaccttattcatttaatatttcatt 12248885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 27911687 - 27911787
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||| ||| ||| | ||||||| | |||||||| |||| ||  |||   || || ||||||||||||| ||||||| ||||||||| ||||    
T  27911687 ttgacattttacacaaatcaagacaatcaataaatgttactacttttgatacaattgtttttacttttactataatggccttattaatttaatatttcat 27911786  T
Q  239 t 239  Q
    |    
T  27911787 t 27911787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 27958106 - 27958206
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||| ||| ||| | ||||||| | |||||||| |||| ||  |||   || || ||||||||||||| ||||||| ||||||||| ||||    
T  27958106 ttgacattttacacaaatcaagacaatcaataaatgttactacttttgatacaattgtttttacttttactataatggccttattaatttaatatttcat 27958205  T
Q  239 t 239  Q
    |    
T  27958206 t 27958206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 35029707 - 35029671
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||| |||||||||||||||||| |||||    
T  35029707 ttttactataataaccttattcatttaatatttcatt 35029671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 8e-39; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 16124251 - 16124372
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||||||||||| ||| |||||||||||||||| |||| ||| ||||| |||||||||||||||||||||    
T  16124251 ttcctttttaattgtcacattttgacattttacataaaccaatatagtcaatgattgttactacttttgatgcaataagttgtatttttactataatgac 16124350  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  16124351 cttattcatttaatatctcatt 16124372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 7404080 - 7403959
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || |||| |||||||||||||||| ||||||||  |||| |||||||||| ||| |||||||| || |||||||||||||||    
T  7404080 ttcctttttaattgtcacattttgatattttacataaaccaagataatcaacaattgatactatttttgatgcaataaattatacttttactataatgac 7403981  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  7403980 cttattcatttaatatctcatt 7403959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 118 - 235
Target Start/End: Original strand, 9127342 - 9127459
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||||||||||||||| |||||||||||||  | |||| ||| ||||| ||||| |||||||||||||||    
T  9127342 ttcctttttaattgtcacattttgacattttacataaaccaaaatagtcaatgattgttatcacttttgatgcaataagttgtacttttactataatgac 9127441  T
Q  218 cttattcatttaatatct 235  Q
    ||||||||||||||||||    
T  9127442 cttattcatttaatatct 9127459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 37303098 - 37303219
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||||| |||||||||||||||||| ||  || || |||||| |||||| |||| ||||||||| ||||||||||||||||||||     
T  37303098 ttcctttttaattgtcatattttgacattttacataaactaaggtagtcgatgattattactacttttgatgtaataagttgtatttttactataatgat 37303197  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  37303198 cttattcatttaatatctcatt 37303219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 14793781 - 14793902
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| ||||||||| ||| ||||||||||| ||| ||||| || || |||||||||||||||    
T  14793781 ttcctttttaattgtcacattttgacattttacacaaaccaatataatcaataattattactatttttgatgcaataagttatacttttactataatgac 14793880  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||| ||||||||    
T  14793881 cttattcatttaacatctcatt 14793902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 9076299 - 9076178
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||||  ||||||||||||| ||||||| | ||||||  |||| ||||| |||| ||| |||||||| || |||||||||||||||    
T  9076299 ttcctttttaattgtcataatttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataaattatacttttactataatgac 9076200  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  9076199 cttattcatttaatatctcatt 9076178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 12665086 - 12664965
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||||| ||||||||||||||||||||| | ||||||  |||| ||||| |||| ||| ||||   |||| |||||||||||||||    
T  12665086 ttcctttttaattgtcatattttgacattttacataaaccaagacaatcaacaattgatactacttttgatgcaatatgatgtacttttactataatgac 12664987  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  12664986 cttattcatttaatatctcatt 12664965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 28446997 - 28447097
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||||||| ||  ||||| || || |||||||||||||||||||||||||||| |||||||    
T  28446997 ttgacattttacacaaaccaagataatcaataattgttactatttttgatacaataagttatacttttactataatgaccttattcatttaacatctcat 28447096  T
Q  239 t 239  Q
    |    
T  28447097 t 28447097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 235
Target Start/End: Original strand, 4985166 - 4985283
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| | ||||| | |||||||  ||||||||| |||| ||| ||||| || ||||||||||||||||||    
T  4985166 ttcctttttaattgtcacattttgacattttacacataccaagacaatcaatagttgttactacttttgatgcaataagttatatttttactataatgac 4985265  T
Q  218 cttattcatttaatatct 235  Q
    ||||||||||||||||||    
T  4985266 cttattcatttaatatct 4985283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 24074841 - 24074946
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    ||||| || ||||||||||||| ||||||||| ||||||| |||||||||| |||| ||| ||||| || || |||||||||||||| ||||||||||||    
T  24074841 tgtcacattttgacattttacacaaaccaaaacaatcaataattgttactacttttgatgcaataagttatacttttactataatgaacttattcattta 24074940  T
Q  230 atatct 235  Q
    ||||||    
T  24074941 atatct 24074946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 28024250 - 28024371
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||||| |||||||||||||  |||||| | ||||||| ||| |||||| |||| ||| ||||| || || |||||||||||||||    
T  28024250 ttcctttttaattgtcatattttgacattttacaccaaccaagacaatcaataattattactacttttgatgcaataagttatacttttactataatgac 28024349  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||| ||||||||    
T  28024350 cttattcatttaacatctcatt 28024371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 118 - 234
Target Start/End: Original strand, 26854086 - 26854202
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| ||||||||| |||| ||||| |||| ||| |||||  | || |||||||||||||||    
T  26854086 ttcctttttaattgtcacattttgacattttacacaaaccaagataatcaataattgatactacttttgatgcaataagctatacttttactataatgac 26854185  T
Q  218 cttattcatttaatatc 234  Q
    |||||||||||||||||    
T  26854186 cttattcatttaatatc 26854202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 38502819 - 38502912
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||| ||||||||||| |||||||||||||||| |||| ||||||||| ||||| ||||||||||||||||    |||||||||||||||||    
T  38502819 acattttacacaaaccaaaatagtcaatgattgttactacttttgatgtaataagttgtacttttactataatgacc----tcatttaatatctcatt 38502912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 34261540 - 34261419
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||||| ||||||||||| | ||||||| | ||||||  |||| ||||| |||| ||  |||||  | ||||||||||||||||||    
T  34261540 ttcctttttaattgtcatattttgacattttagacaaaccaagacaatcaacaattgatactacttttgatacaataagctatatttttactataatgac 34261441  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  34261440 cttattcatttaatatctcatt 34261419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 2133919 - 2134018
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||||||||||| | ||||||| |||||||||| |||| ||| ||||| || || ||||||||||||||||||||| |||||| |||||||    
T  2133919 ttgacattttacataaaccaagacaatcaataattgttacta-ttttgatgcaataagttatacttttactataatgaccttattaatttaacatctcat 2134017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 7579658 - 7579780
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttat-gtaataaattgtatttttactataatga 216  Q
    ||||||||||  ||||| || |||| |||||||| ||||||||| ||||||  |||| ||||| ||||| | | |||||| | || ||||||||||||||    
T  7579658 ttcctttttaattgtcacattttgatattttacacaaaccaaaacaatcaacaattgatactactttttgttgcaataaactatacttttactataatga 7579757  T
Q  217 ccttattcatttaatatctcatt 239  Q
    |||||||||||||||||||||||    
T  7579758 ccttattcatttaatatctcatt 7579780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 8825285 - 8825164
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  | ||| || ||||||||||||| ||| ||| | ||||||  |||| ||||| |||| ||| |||||| | || |||||||||||||||    
T  8825285 ttcctttttaattatcacattttgacattttacacaaatcaagacaatcaacaattgatactacttttgatgcaataaactatacttttactataatgac 8825186  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  8825185 cttattcatttaatatctcatt 8825164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 38363417 - 38363296
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| |  ||||||||||||| ||||||| | ||||||  |||| ||||| |||| ||| |||||| | || |||||||||||||||    
T  38363417 ttcctttttaattgtcacaatttgacattttacacaaaccaagacaatcaacaattgatactaattttgatgcaataaactatacttttactataatgac 38363318  T
Q  218 cttattcatttaatatctcatt 239  Q
     |||||||||||||||||||||    
T  38363317 tttattcatttaatatctcatt 38363296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 42911778 - 42911657
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || |||| |||||||| ||||||| | ||||||| |||||||||| |||| ||| ||||| || || ||||||||||||||     
T  42911778 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaataattgttactacttttgatgcaataagttatacttttactataatgat 42911679  T
Q  218 cttattcatttaatatctcatt 239  Q
    | ||||||||||| ||||||||    
T  42911678 catattcatttaacatctcatt 42911657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 118 - 234
Target Start/End: Complemental strand, 38910501 - 38910385
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| ||||||||  |||| ||||| |||| ||| |||||  | || |||||||||||||||    
T  38910501 ttcctttttaattgtcacattttgacattttacacaaaccaagataatcaacaattgatactacttttgatgcaataagctatacttttactataatgac 38910402  T
Q  218 cttattcatttaatatc 234  Q
     ||||||||||||||||    
T  38910401 tttattcatttaatatc 38910385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 1087927 - 1088045
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    |||||||  ||||| || || |||||||||| ||||||| | ||||||  |||| ||||| |||| ||| |||||| | |||||||||||||| ||| ||    
T  1087927 ctttttaattgtcacattttaacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataaactatatttttactataacgacttt 1088026  T
Q  221 attcatttaatatctcatt 239  Q
    |||||||||||||||||||    
T  1088027 attcatttaatatctcatt 1088045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 10359229 - 10359347
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    |||||||  ||||| || ||||||||||||| ||||||||| ||||||  |||| ||||| |||| ||| |||||  | || ||||||||| ||||||||    
T  10359229 ctttttaattgtcacattttgacattttacacaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactatgatgacctt 10359328  T
Q  221 attcatttaatatctcatt 239  Q
    ||||||||||||| |||||    
T  10359329 attcatttaatatatcatt 10359347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 239
Target Start/End: Original strand, 19831560 - 19831654
Alignment:
Q  145 ttttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||| ||||||| | ||||||| | ||||| ||||||| ||  ||||| || ||| ||||||||||||||||||||||||||||||||||||    
T  19831560 ttttacacaaaccaagacaatcaataaatgttaatatttttgatacaataatttatatgtttactataatgaccttattcatttaatatctcatt 19831654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 142 - 236
Target Start/End: Original strand, 30368150 - 30368244
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctc 236  Q
    |||||||||| |||| || | ||||||| | ||||||||||||| || |||||| || ||||||||||||||| |||||||| ||||||||||||    
T  30368150 acattttacacaaactaagacaatcaataaatgttactatttttgatataataatttttatttttactataataaccttatttatttaatatctc 30368244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 3244012 - 3243903
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    |||||| | ||||||||||||||||| ||| | ||| ||| | ||||||||||||||||  ||||| || | ||||| |||||||  |||||||||||||    
T  3244012 tgtcattttttgacattttacataaatcaagacaattaataaatgttactattttttatacaataatttttgtttttcctataatagccttattcattta 3243913  T
Q  230 atatctcatt 239  Q
    ||||||||||    
T  3243912 atatctcatt 3243903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 4694968 - 4694871
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||| || ||||||| ||||||||| |||| || || |||| ||||||||| || || |||||||||||||||||| ||||||||| ||||||||    
T  4694968 acatttttcacaaaccaagataatcaataattgctaatacttttgatgtaataagttatacttttactataatgaccttgttcatttaacatctcatt 4694871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 235
Target Start/End: Original strand, 6754170 - 6754287
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| | ||||||| |||| |  || |||| ||| |||||  | || |||||||||||||||    
T  6754170 ttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaataattgatcatacttttgatgcaataagctatacttttactataatgac 6754269  T
Q  218 cttattcatttaatatct 235  Q
    ||||||||||||||||||    
T  6754270 cttattcatttaatatct 6754287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 7408559 - 7408438
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||| | ||||||||||||| ||||||||| ||||||| |   ||| || |||| ||  ||||| || || |||||||||||| ||    
T  7408559 ttcctttttaattgtcatcttttgacattttacacaaaccaaaacaatcaataaacattaatacttttgatacaataatttatacttttactataataac 7408460  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  7408459 cttattcatttaatatctcatt 7408438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 12869902 - 12870011
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    ||||| || |||| |||||| | ||||||| ||||||||  |||| ||||| |||| ||| ||||| || || |||||||||||||||||||||||||||    
T  12869902 tgtcacattttgatattttatacaaaccaagataatcaacaattgatactacttttgatgcaataagttatacttttactataatgaccttattcattta 12870001  T
Q  230 atatctcatt 239  Q
    |||| |||||    
T  12870002 atatttcatt 12870011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 18020759 - 18020880
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| | ||||| | ||||||  |||| ||||| |||| ||| |||||  | || |||||||||||||||    
T  18020759 ttcctttttaattgtcacattttgacattttacacagaccaagacaatcaacaattgatactacttttaatgcaataagctatacttttactataatgac 18020858  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||| ||||||||||    
T  18020859 cttattcatttgatatctcatt 18020880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 36239674 - 36239569
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    ||||| || ||||||||||||| | | ||| | |||||||  ||||||||| |||| ||| ||||| || |||||||||||||||||||||||| |||||    
T  36239674 tgtcacattttgacattttacacatatcaagacaatcaatagttgttactacttttgatgcaataagttatatttttactataatgaccttattaattta 36239575  T
Q  230 atatct 235  Q
    ||||||    
T  36239574 atatct 36239569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 235
Target Start/End: Complemental strand, 38702369 - 38702252
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||||| || | |||||||||||||||| | ||||||  |||| ||||| |||| ||| |||||  | || |||||||||||||||    
T  38702369 ttcctttttaattgtcatattttaatattttacataaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgac 38702270  T
Q  218 cttattcatttaatatct 235  Q
    |||||| |||||||||||    
T  38702269 cttatttatttaatatct 38702252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 39073272 - 39073151
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || |||| |||||||| ||||||| | ||||||  |||| ||||| |||| ||| |||||  | || |||||||||||| ||    
T  39073272 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactataataac 39073173  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  39073172 cttattcatttaatatctcatt 39073151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 3686897 - 3686797
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||| ||||| ||||||||||| ||||||| | |||| ||| |||| ||  ||||| || ||||||||||||||| |||||||| ||||||||||||||    
T  3686897 ttgacgttttatataaaccaaaacaatcaataaatgttgctacttttgatacaataatttctatttttactataataaccttatttatttaatatctcat 3686798  T
Q  239 t 239  Q
    |    
T  3686797 t 3686797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 239
Target Start/End: Original strand, 1297727 - 1297850
Alignment:
Q  117 attcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactatttttt-atgtaataaattgtatttttactataatg 215  Q
    |||||||||||  ||| | || ||||||||||| |||||| || | ||||||  |||  ||||||||||| ||| |||||  | || |||||||||||||    
T  1297727 attcctttttaattgttacattttgacattttatataaactaagacaatcaacaattaatactattttttgatgcaataagctatacttttactataatg 1297826  T
Q  216 accttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||||    
T  1297827 accttattcatttaatatctcatt 1297850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 239
Target Start/End: Complemental strand, 4017643 - 4017521
Alignment:
Q  117 attcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatga 216  Q
    |||||||||||  |||||  | ||||||||||||| ||| ||| ||||||||| ||||||  || |||| ||| ||||| || |  |||||||||||| |    
T  4017643 attcctttttaattgtcactttttgacattttacacaaatcaagataatcaataattgtttttacttttgatgcaataagttattcttttactataataa 4017544  T
Q  217 ccttattcatttaatatctcatt 239  Q
    |||||||||||||| ||||||||    
T  4017543 ccttattcatttaacatctcatt 4017521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 4098556 - 4098438
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    |||||||  ||||| || ||||||||||||| ||||||| | ||||||  |||| || || |||| ||  ||||| || ||  |||||||||||||||||    
T  4098556 ctttttaattgtcacattttgacattttacacaaaccaagacaatcaaaaattgatattacttttgatacaataagttatacctttactataatgacctt 4098457  T
Q  221 attcatttaatatctcatt 239  Q
    |||||||||||||||||||    
T  4098456 attcatttaatatctcatt 4098438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 6072656 - 6072559
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||| |||  || | ||||||  |||| ||||| |||| ||| ||||| || || |||||||||||||||||||||||||||||||||||||    
T  6072656 acattttacacaaattaagacaatcaacaattgatactacttttgatgcaataagttatacttttactataatgaccttattcatttaatatctcatt 6072559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 6689803 - 6689706
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||| ||| ||||| ||| ||| ||||||||||||||| ||  |||||  | || |||||||||||||| ||||||||||||| ||||||||    
T  6689803 acattttacacaaatcaaaacaattaataattgttactatttttgatacaataagctatacttttactataatgatcttattcatttaacatctcatt 6689706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 25344188 - 25344067
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||| ||||||||| ||| ||| | ||||||  |||| | ||| |||| ||| |||||  | ||||||||||||||| ||    
T  25344188 ttcctttttaattgtcacattttgtcattttacacaaatcaagacaatcaacaattgatcctacttttgatgcaataagctatatttttactataataac 25344089  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  25344088 cttattcatttaatatctcatt 25344067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 232
Target Start/End: Original strand, 31546011 - 31546104
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaata 232  Q
    ||||||||||||| ||||||| | ||||||| |||||||||| |||| ||| ||||| || || |||||||| |||||||| ||||| ||||||    
T  31546011 ttgacattttacacaaaccaagacaatcaataattgttactacttttgatgcaataagttatacttttactacaatgacctgattcaattaata 31546104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 39893824 - 39893921
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||| ||||||||||||||||| | |||||||| |||| ||  |||   || || ||||||||||||||||||||| ||||||||| |||||    
T  39893824 acattttacacaaaccaaaataatcaataagtgttactacttttgatacaattgtttttacttttactataatgaccttattaatttaatatttcatt 39893921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 4962198 - 4962298
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||||||||||| ||||||||| |  ||||  | |||| ||| ||||| || || ||||||||||||||  |||||||||||| |||||||    
T  4962198 ttgacattttacataaaccaagataatcaataaccgttatcacttttgatgcaataagttatacttttactataatgattttattcatttaacatctcat 4962297  T
Q  239 t 239  Q
    |    
T  4962298 t 4962298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 40198963 - 40198895
Alignment:
Q  171 attgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||| |||| ||| ||||| || || |||||||||||||||||||||||||||| ||||||||    
T  40198963 attgttactacttttgatgcaataagttatacttttactataatgaccttattcatttaacatctcatt 40198895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 235
Target Start/End: Original strand, 2673969 - 2674086
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| | ||||||  |||| || || |||| ||| |||||  | || ||||||||||||||     
T  2673969 ttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatattacttttgatgcaataagctatacttttactataatgat 2674068  T
Q  218 cttattcatttaatatct 235  Q
     |||||||||||||||||    
T  2674069 tttattcatttaatatct 2674086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 4175471 - 4175592
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||| ||| | ||| ||  |||| ||||| |||| ||  |||||  | || |||||||||||| ||    
T  4175471 ttcctttttaattgtcacattttgacattttacacaaagcaagacaataaacaattgatactacttttgatacaataagctatacttttactataataac 4175570  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  4175571 cttattcatttaatatctcatt 4175592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 32389190 - 32389093
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||||||||| | ||||||| | |||||||| |||| ||  ||| | || || ||||||||||||| ||||||| ||||||||| |||||    
T  32389190 acattttacataaaccaagacaatcaataagtgttactacttttgatacaattatttttacttttactataatggccttattaatttaatatttcatt 32389093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 6331028 - 6330928
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||||||||  | | ||||||| | | |||||| |||| ||  ||||| || ||||||||||||||| | ||||||||| |||||||||||    
T  6331028 ttgacattttacataaacttagacaatcaataaatattactacttttgataaaataatttatatttttactataataatcttattcatgtaatatctcat 6330929  T
Q  239 t 239  Q
    |    
T  6330928 t 6330928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 8229839 - 8229915
Alignment:
Q  163 aatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||| ||||||| || |||| ||| ||||| || || |||||||||| ||||||||||||||||| ||||||||    
T  8229839 aatcaataattgttaatacttttgatgcaataagttatacttttactatagtgaccttattcatttaacatctcatt 8229915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 18794990 - 18794894
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatct 235  Q
    ||||||||||||| ||| ||| | ||||||  |||| |  || |||| |||||||||  | || |||||||||||||||||||||||||||||||||    
T  18794990 ttgacattttacacaaatcaagacaatcaacaattgatcatacttttgatgtaataagctatacttttactataatgaccttattcatttaatatct 18794894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 22582679 - 22582579
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||| | ||| ||| | ||||||  |||  ||||| |||| ||| |||||| | || || |||||||||||||||||||||||||||||||||    
T  22582679 ttgacattttatacaaatcaagacaatcaacaatttatactacttttgatgcaataaactatacttgtactataatgaccttattcatttaatatctcat 22582580  T
Q  239 t 239  Q
    |    
T  22582579 t 22582579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 42393760 - 42393856
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatct 235  Q
    ||||||||||||| ||||||| ||||||||| | ||||| | ||| ||||  ||||| || || ||||||||||||  ||||| |||||||||||||    
T  42393760 ttgacattttacacaaaccaagataatcaataaatgttattttttcttatacaataatttatacttttactataatagccttagtcatttaatatct 42393856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 239
Target Start/End: Original strand, 25027588 - 25027687
Alignment:
Q  140 tgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||||||||||||| || | ||||||| | |||||||| |||| ||  ||||| |  || ||||||||||||  ||||||||||||||||| |||||    
T  25027588 tgacattttacataaactaagacaatcaataaatgttactacttttgatacaataattgatacttttactataatatccttattcatttaatatttcatt 25027687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 231
Target Start/End: Complemental strand, 18465926 - 18465812
Alignment:
Q  117 attcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatga 216  Q
    |||||||||||  | |||||| |||| ||||| || ||||||||| ||||||  |||| ||||| |||| ||||||||| || || |||||||||||| |    
T  18465926 attcctttttaattatcatattttgatatttttcagaaaccaaaacaatcaacaattgatactacttttgatgtaataagttatacttttactataataa 18465827  T
Q  217 ccttattcatttaat 231  Q
      || ||||||||||    
T  18465826 ttttgttcatttaat 18465812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 235
Target Start/End: Complemental strand, 13461238 - 13461121
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||  | ||||||||||||| ||||||| | | ||||| | ||||||| ||| ||||  ||||| || |||||||| |||||| |     
T  13461238 ttcctttttaattgtcactttttgacattttacacaaaccaatacactcaataaatgttactttttgttatacaataatttatatttttattataataat 13461139  T
Q  218 cttattcatttaatatct 235  Q
    ||| ||||||||||||||    
T  13461138 ctttttcatttaatatct 13461121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 18437314 - 18437435
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||  | |||| |||||||| ||||||| | ||||||| | |||||| |||||| ||  ||||  || || |||||||||||| ||    
T  18437314 ttcctttttaattgtcactttttgatattttacacaaaccaatacaatcaataaatgttaccatttttgatacaatactttatacttttactataataac 18437413  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| ||||| |||||||||    
T  18437414 cttatttatttattatctcatt 18437435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 38017292 - 38017389
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||| |||| || | ||||||  |||| || || |||| ||| |||||  | || |||||||||||||||||||||||||||||||| ||||    
T  38017292 acattttacacaaacgaagacaatcaacaattgatattacttttgatgcaataagctatacttttactataatgaccttattcatttaatatcacatt 38017389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 235
Target Start/End: Original strand, 38308117 - 38308234
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    |||||||||| | ||||  | ||||||||||||| ||||||| | | ||||| | ||||||| ||||||||  ||||| |  || ||||||||||||  |    
T  38308117 ttcctttttaacggtcactttttgacattttacacaaaccaagacactcaataaatgttacttttttttatacaataattcatacttttactataatagc 38308216  T
Q  218 cttattcatttaatatct 235  Q
    |||| |||||||||||||    
T  38308217 cttagtcatttaatatct 38308234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 4688874 - 4688910
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||| |||||||||||||||||||||||||||||    
T  4688874 ttttactttaatgaccttattcatttaatatctcatt 4688910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 5119361 - 5119285
Alignment:
Q  163 aatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||| |||||| ||| |||| ||| ||||| || || |||||||||||| |||||||| |||||| ||||||||    
T  5119361 aatcaataattgtttctacttttgatgcaataagttatacttttactataataaccttattaatttaacatctcatt 5119285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 28463397 - 28463493
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatct 235  Q
    |||| |||||||| ||||||| | | ||||| | ||||||| ||| ||||  ||||| || || |||||||||||| |||||| |||||||||||||    
T  28463397 ttgatattttacacaaaccaagacactcaataaatgttactttttcttatacaataatttatacttttactataataaccttagtcatttaatatct 28463493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 236
Target Start/End: Original strand, 31985062 - 31985159
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctc 236  Q
    ||||||||||||||||| ||| | ||||||| | ||| | || |||| || |||||| || ||||||||||| |||   |||||||||||||| ||||    
T  31985062 ttgacattttacataaatcaagacaatcaataaatgtcattacttttaatataataatttatatttttactagaatagtcttattcatttaatgtctc 31985159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 32439924 - 32440020
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatct 235  Q
    ||||||||||||| ||||||| | | ||||| | ||||||| ||| ||||  ||||| | ||| ||||| ||||||  ||||| |||||||||||||    
T  32439924 ttgacattttacacaaaccaagacactcaataaatgttactttttcttatacaataattagtacttttattataatagccttagtcatttaatatct 32440020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 8e-39; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 354215 - 354094
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||||||||||| ||| ||||||||||||||||||||| ||| ||||| ||||| |||||||||||||||    
T  354215 ttcctttttaattgtcacattttgacattttacataaaccaagatagtcaatgattgttactatttttgatgcaataagttgtacttttactataatgac 354116  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  354115 cttattcatttaatatctcatt 354094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 19093148 - 19093269
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||||||||||| ||| ||||| |||||||||| |||| ||| ||||| ||||| |||||||||||||||    
T  19093148 ttcctttttaattgtcacattttgacattttacataaaccaagatagtcaataattgttactacttttgatgcaataagttgtacttttactataatgac 19093247  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  19093248 cttattcatttaatatctcatt 19093269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 53125245 - 53125350
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    |||||||| ||||||||||||| ||||||| ||||||||| ||||||||||||||||||| ||||| || || |||||||||||||||||||||||||||    
T  53125245 tgtcatattttgacattttacacaaaccaagataatcaataattgttactattttttatgcaataagttatacttttactataatgaccttattcattta 53125344  T
Q  230 atatct 235  Q
    ||||||    
T  53125345 atatct 53125350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 143 - 239
Target Start/End: Complemental strand, 47251637 - 47251541
Alignment:
Q  143 cattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||| ||||| ||||| ||||| |||||||||||||||||||||||||||||||    
T  47251637 cattttacataaaccaaaataatcaatgattgttactacttttgatgcaataagttgtacttttattataatgaccttattcatttaatatctcatt 47251541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 40412192 - 40412071
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||| |||| ||||||| | |||||||||||||||||  || | ||| ||| ||||||||||||||| ||||||||| || ||||||||||||||||||    
T  40412192 ttcctatttaactgtcattttttgacattttacataaattaagacaattaataattgttactatttttgatgtaataagttatatttttactataatgac 40412093  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||| || |||||    
T  40412092 cttattcatttaacatttcatt 40412071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 235
Target Start/End: Complemental strand, 52061807 - 52061690
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||||| ||||||||||||| ||| ||| | ||||||| |||||||||| |||| ||| ||||| || || |||||||||||||||    
T  52061807 ttcctttttaattgtcatattttgacattttacacaaatcaagacaatcaatcattgttactacttttgatgcaataagttatacttttactataatgac 52061708  T
Q  218 cttattcatttaatatct 235  Q
     |||||||||||||||||    
T  52061707 tttattcatttaatatct 52061690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 54231788 - 54231667
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||| | ||||||||||||| ||| ||| | ||||||| |||||||||| |||| ||| ||||| || || |||||||||||||||    
T  54231788 ttcctttttaattgtcattttttgacattttacacaaatcaagacaatcaataattgttactacttttgatgcaataagttatacttttactataatgac 54231689  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||| ||||||||    
T  54231688 cttattcatttaacatctcatt 54231667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 235
Target Start/End: Complemental strand, 55703169 - 55703052
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||||| ||||||||||||||| ||||| | ||||||| ||||||| || |||| ||| ||||| || |||||||||||||| |||    
T  55703169 ttcctttttaattgtcatattttgacattttacatataccaagacaatcaataattgttattacttttgatgcaataagttatatttttactataacgac 55703070  T
Q  218 cttattcatttaatatct 235  Q
    |||||||||||| |||||    
T  55703069 cttattcatttattatct 55703052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 38542261 - 38542392
Alignment:
Q  108 tactactcaattcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtattttta 207  Q
    ||||||| | ||||||||||  |||||| | ||||||||||||||||||||| | ||| ||| |||||||||| |||| ||| ||||| ||  | |||||    
T  38542261 tactacttagttcctttttaattgtcattttttgacattttacataaaccaagacaattaataattgttactacttttgatgcaataagttagactttta 38542360  T
Q  208 ctataatgaccttattcatttaatatctcatt 239  Q
    ||||||||| ||||||||||||| ||||||||    
T  38542361 ctataatgaacttattcatttaacatctcatt 38542392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 235
Target Start/End: Complemental strand, 12252341 - 12252224
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    |||||||||| ||||||||| ||||||||||||||||| ||| | ||||||  |||| || || |||| ||| ||||| || || |||||||||||||||    
T  12252341 ttcctttttaactgtcatattttgacattttacataaatcaagacaatcaacaattgataatacttttgatgcaataagttatacttttactataatgac 12252242  T
Q  218 cttattcatttaatatct 235  Q
     |||||||||||||||||    
T  12252241 tttattcatttaatatct 12252224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 13629188 - 13629309
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| | ||||||  |||| |||||||||| ||| |||||  | || |||||||||||| ||    
T  13629188 ttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactatttttcatgcaataagctatacttttactataataac 13629287  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  13629288 cttattcatttaatatctcatt 13629309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 16464777 - 16464898
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||| | | ||||||  |||| |||||||||| ||| |||||  | || |||||||||||||||    
T  16464777 ttcctttttagttgtcacattttgacattttacacaaacctagacaatcaacaattgatactatttttgatgcaataagctatacttttactataatgac 16464876  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  16464877 cttattcatttaatatctcatt 16464898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 31984168 - 31984268
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||| ||||||| | ||||||| |||||||||| |||| ||| ||||| || || ||||||| |||||||||||||||||||| |||||||    
T  31984168 ttgacattttacacaaaccaacacaatcaataattgttactacttttgatgcaataagttatacttttactgtaatgaccttattcatttaacatctcat 31984267  T
Q  239 t 239  Q
    |    
T  31984268 t 31984268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 18135048 - 18135167
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactatttttt-atgtaataaattgtatttttactataatgacct 219  Q
    |||||||  |||||||| ||||||||||||| ||||||||| ||||||| | | |||||||||||| ||  ||||| || ||||||||||||||| ||||    
T  18135048 ctttttaattgtcatattttgacattttacacaaaccaaaacaatcaataaatattactattttttgatacaataatttttatttttactataataacct 18135147  T
Q  220 tattcatttaatatctcatt 239  Q
    |||| ||||||||| |||||    
T  18135148 tatttatttaatatttcatt 18135167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 118 - 233
Target Start/End: Original strand, 22828396 - 22828511
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| | || |||| |||| ||||| |||| ||| ||||| || || |||||||||||||||    
T  22828396 ttcctttttaattgtcacattttgacattttacacaaaccaagacaaccaataattgctactacttttgatgcaataagttatacttttactataatgac 22828495  T
Q  218 cttattcatttaatat 233  Q
    ||||||||||||||||    
T  22828496 cttattcatttaatat 22828511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 49122258 - 49122377
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactatttttt-atgtaataaattgtatttttactataatgacct 219  Q
    |||||||  |||||||| ||||||||||||| ||||||||| ||||||| | | |||||||||||| ||  ||||| || ||||||||||||||| ||||    
T  49122258 ctttttaattgtcatattttgacattttacacaaaccaaaacaatcaataaatattactattttttgatacaataatttttatttttactataataacct 49122357  T
Q  220 tattcatttaatatctcatt 239  Q
    |||| ||||||||| |||||    
T  49122358 tatttatttaatatttcatt 49122377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 44069277 - 44069159
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    |||||||  ||||| || ||||||||||||| ||||||| | ||||||  |||| ||||| |||| ||| |||||  | || ||||||||||||||||||    
T  44069277 ctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 44069178  T
Q  221 attcatttaatatctcatt 239  Q
    |||||||||||||||||||    
T  44069177 attcatttaatatctcatt 44069159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 21044743 - 21044863
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||| | ||| || ||||||||||||| ||||||| | ||||||  |||| |||||||||| ||| |||||  | || |||||||||||||||    
T  21044743 ttcctttttat-tatcacattttgacattttacacaaaccaagacaatcaacaattgatactatttttgatgcaataagctatacttttactataatgac 21044841  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| |||||||||||||||    
T  21044842 cttatttatttaatatctcatt 21044863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 22678316 - 22678425
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    ||||| || ||||||||||| ||||||||| ||||||||  |||| ||||| | || ||| |||||  | || |||||||||||||||||||||||||||    
T  22678316 tgtcacattttgacattttatataaaccaagataatcaacaattgatactactattgatgcaataagctatacttttactataatgaccttattcattta 22678415  T
Q  230 atatctcatt 239  Q
    ||||||||||    
T  22678416 atatctcatt 22678425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 31861981 - 31862102
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||| || | |||| |||||||| |||| || ||||||||| |||||||||| |||| ||| || ||||| || |||||||||||||||    
T  31861981 ttcctttttaattgttattttttgaaattttacacaaactaagataatcaataattgttactacttttgatgcaaaaaattatacttttactataatgac 31862080  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||| || |||||    
T  31862081 cttattcatttaacatatcatt 31862102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 44013908 - 44014029
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| | ||||||  ||||  ||||||||| ||| |||||  | || |||||||||||||||    
T  44013908 ttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgaaactatttttgatgcaataagctatacttttactataatgac 44014007  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| |||||||||||||||    
T  44014008 cttatttatttaatatctcatt 44014029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 44217955 - 44217834
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| | ||||||  |||| ||||| |||| ||| |||||  | || |||||||||||||||    
T  44217955 ttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagatatacttttactataatgac 44217856  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||| ||||||||||||||||||    
T  44217855 cttcttcatttaatatctcatt 44217834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 5374348 - 5374466
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    |||||||  |||||||| ||||||||||| | ||| ||| | ||||||  |||| ||||| |||| ||| |||||  | ||||||||||||||||| |||    
T  5374348 ctttttaattgtcatattttgacattttatacaaatcaagacaatcaacaattgatactacttttgatgcaataagctatatttttactataatgatctt 5374447  T
Q  221 attcatttaatatctcatt 239  Q
    |||||||||||||||||||    
T  5374448 attcatttaatatctcatt 5374466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 38617304 - 38617423
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || |||| |||||||| ||||||| |  |||||  |||| ||||| |||| ||| |||||  | ||||||||||||||||||    
T  38617304 ttcctttttaattgtcacattttgatattttacacaaaccaaca--atcaacaattgatactacttttgatgcaataagctatatttttactataatgac 38617401  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  38617402 cttattcatttaatatctcatt 38617423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 8735638 - 8735517
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || |||| |||||||| ||||||| | ||||||  |||| ||||| |||| ||| |||||  | || ||||||||||||||     
T  8735638 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgat 8735539  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  8735538 cttattcatttaatatctcatt 8735517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 26906396 - 26906505
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    |||||||| |||| |||||||| |||| |||| ||||||  |||| || || |||||||| ||||| || || ||||||| ||||||||||||| |||||    
T  26906396 tgtcatattttgatattttacacaaactaaaacaatcaacaattgatattactttttatgcaataagttatacttttactttaatgaccttattaattta 26906495  T
Q  230 atatctcatt 239  Q
    ||||||||||    
T  26906496 atatctcatt 26906505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 33755026 - 33755147
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || || ||||||||||||||| || | ||||||  |||| ||||  |||| ||| |||||  | || |||||||||||||||    
T  33755026 ttcctttttaattgtcacattttaacattttacataaactaagacaatcaacaattgatactccttttaatgcaataagctatacttttactataatgac 33755125  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  33755126 cttattcatttaatatctcatt 33755147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 35232305 - 35232414
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    ||||| || ||||||||||||| ||||||| | ||||||  |||| ||||  |||| ||| |||||  | || |||||||||||||||||||||||||||    
T  35232305 tgtcacattttgacattttacacaaaccaagacaatcaacaattgatactgcttttgatgcaataagatatacttttactataatgaccttattcattta 35232404  T
Q  230 atatctcatt 239  Q
    ||||||||||    
T  35232405 atatctcatt 35232414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 35381417 - 35381531
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    |||||||  ||||| || |||||||||||||||||  || ||| | |||||||||||||| |||| ||    ||| ||||| ||||| ||||||||||||    
T  35381417 ctttttaattgtcacattttgacattttacataaattaagatagttaatgattgttactacttttgat----taagttgtacttttattataatgacctt 35381512  T
Q  221 attcatttaatatctcatt 239  Q
    |||||||||||||||||||    
T  35381513 attcatttaatatctcatt 35381531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 42099945 - 42099840
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    ||||| || ||||||||  ||| ||||||| | ||||||| |||||||||| |||| ||| ||||| || || ||||||| |||||||||||||||||||    
T  42099945 tgtcacattttgacattaaacacaaaccaagacaatcaataattgttactacttttgatgcaataagttatacttttactgtaatgaccttattcattta 42099846  T
Q  230 atatct 235  Q
    ||||||    
T  42099845 atatct 42099840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 46872158 - 46872049
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    ||||| || ||||||||||||| ||||||| | ||||||  |||| ||||| |||| ||| ||||| || |  |||||||||||||||||||||||||||    
T  46872158 tgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagttattcttttactataatgaccttattcattta 46872059  T
Q  230 atatctcatt 239  Q
    |||| |||||    
T  46872058 atatttcatt 46872049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 48782436 - 48782331
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    ||||| || ||||||||||||| ||||||| ||||||||  |||| ||||| |||| ||| |||||    || |||||||||||||||||||||||||||    
T  48782436 tgtcacattttgacattttacacaaaccaagataatcaacaattgatactacttttgatgcaataagcaatacttttactataatgaccttattcattta 48782337  T
Q  230 atatct 235  Q
    ||||||    
T  48782336 atatct 48782331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 53599781 - 53599902
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || || |||||||||| ||||||| | ||||||  |||| || || |||| ||| ||||| || || |||||||||||||||    
T  53599781 ttcctttttaattgtcacattttaacattttacacaaaccaagacaatcaacaattgatattacttttgatgcaataagttatacttttactataatgac 53599880  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||| ||||    
T  53599881 cttattcatttaatatcacatt 53599902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 29295582 - 29295482
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    |||| |||||||| ||||||| | ||||||| |||| ||||| |||  ||| ||||| || || ||||| ||||||||||||||||||||||||||||||    
T  29295582 ttgatattttacacaaaccaagacaatcaataattgatactactttcgatgcaataagttatacttttaatataatgaccttattcatttaatatctcat 29295483  T
Q  239 t 239  Q
    |    
T  29295482 t 29295482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 42645489 - 42645393
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatct 235  Q
    ||||||||||||||| || || ||||||||| ||||||| || |||| ||| ||||| || || |||||| ||||||| ||||||||||||||||||    
T  42645489 ttgacattttacatatactaagataatcaataattgttattacttttgatgcaataagttatacttttaccataatgatcttattcatttaatatct 42645393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 118 - 234
Target Start/End: Original strand, 56576099 - 56576215
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||| ||||||| ||||||| ||||||||  |||| |||||  ||| ||| |||||  | || |||||||||||||||    
T  56576099 ttcctttttaattgtcacattttgacgttttacacaaaccaagataatcaacaattgatactacctttgatgcaataagctatacttttactataatgac 56576198  T
Q  218 cttattcatttaatatc 234  Q
    |||||||||||||||||    
T  56576199 cttattcatttaatatc 56576215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 4201375 - 4201434
Alignment:
Q  180 attttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||||||||||||| |||||    
T  4201375 attttttatgcaataagttgtacttttactataatgaccttattcatttaatatttcatt 4201434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 185
Target Start/End: Complemental strand, 17698711 - 17698644
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttt 185  Q
    ||||||||||  |||||||| ||||||||||||||||||||| ||| |||||||||||||||| ||||    
T  17698711 ttcctttttaattgtcatattttgacattttacataaaccaagatagtcaatgattgttactactttt 17698644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 39671552 - 39671453
Alignment:
Q  140 tgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||| ||||||| | ||||||  |||| || || |||| ||| |||||  | || |||||||||||||||||||||||||||||||||||||    
T  39671552 tgacattttacacaaaccaagacaatcaacaattgatattacttttgatgcaataagctatacttttactataatgaccttattcatttaatatctcatt 39671453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 16664478 - 16664373
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    ||||| || ||||||||||||| ||| ||| | ||||||  |||| ||||| |||| ||| |||||  | || |||||||||||||||||||||||||||    
T  16664478 tgtcacattttgacattttacacaaatcaagacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttattcattta 16664379  T
Q  230 atatct 235  Q
    ||||||    
T  16664378 atatct 16664373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 26620346 - 26620467
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || |||||||||| || ||||||||| || |||  |||| ||||| |||| ||| |||||  | || ||||| |||||||||    
T  26620346 ttcctttttaattgtcacattttgacattttgcacaaaccaaaacaaacaacaattgatactacttttgatgcaataagctatacttttattataatgac 26620445  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| |||||||||||||||    
T  26620446 cttattaatttaatatctcatt 26620467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 33084722 - 33084606
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||  | ||||||||||||| |||||||     ||||| |||||||||| |||| ||| ||||| || || |||||||||||||||    
T  33084722 ttcctttttaattgtcactttttgacattttacagaaaccaa-----tcaataattgttactacttttgatgcaataagttatacttttactataatgac 33084628  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| |||||| ||||||||    
T  33084627 cttatttatttaacatctcatt 33084606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 55147080 - 55147177
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||||||||| | ||| ||| ||||||| || |||| ||| |||||  | || ||||||| |||||||||||||||||||| ||||||||    
T  55147080 acattttacataaaccaagacaattaataattgttattacttttgatgcaataagctatacttttactgtaatgaccttattcatttaacatctcatt 55147177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 118 - 233
Target Start/End: Original strand, 19527215 - 19527330
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||| ||||||| ||||||| ||||||||  |||| ||||| |||| ||  |||||  | || |||||||||||||||    
T  19527215 ttcctttttaattgtcacattttgacgttttacacaaaccaagataatcaacaattgatactacttttgatacaataagctataattttactataatgac 19527314  T
Q  218 cttattcatttaatat 233  Q
    ||||||||||| ||||    
T  19527315 cttattcatttcatat 19527330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 118 - 233
Target Start/End: Complemental strand, 35231939 - 35231824
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| |||  || | ||||||  |||| ||||| |||| ||| |||||| | || |||||||||||||||    
T  35231939 ttcctttttaattgtcacattttgacattttacacaaattaagacaatcaacaattgatactacttttgatgcaataaactatacttttactataatgac 35231840  T
Q  218 cttattcatttaatat 233  Q
     |||||||||||||||    
T  35231839 tttattcatttaatat 35231824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 139 - 233
Target Start/End: Complemental strand, 37502250 - 37502156
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatat 233  Q
    ||||||||||| | ||||||| | ||||||| | |||||||| |||| ||  ||||| || || |||||||||||| ||||||||||||||||||    
T  37502250 ttgacattttatacaaaccaagacaatcaataaatgttactacttttgatacaataatttatacttttactataataaccttattcatttaatat 37502156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 47884994 - 47885100
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctta-ttcattt 228  Q
    ||||| || |||||||||||||  |||||||| ||||||| ||| ||| || |||| ||| ||||| ||  | ||||||||||||||||||| |||||||    
T  47884994 tgtcacattttgacattttacacgaaccaaaacaatcaataattattattacttttgatgcaataagtttgacttttactataatgaccttatttcattt 47885093  T
Q  229 aatatct 235  Q
    |||||||    
T  47885094 aatatct 47885100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 23237855 - 23237758
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||| |||| | || ||||||  |||| ||||| |||| |||  ||||  | || |||||||||||||||||||||||||||||||||||||    
T  23237855 acattttacacaaactagaacaatcaacaattgatactacttttgatgcgataagctatacttttactataatgaccttattcatttaatatctcatt 23237758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 39683733 - 39683830
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||| ||||||| | ||||||  |||| ||||| |||| ||| |||||  | |||||||| ||||| || ||||||||||||||||||||||    
T  39683733 acattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatatttttagtataacgatcttattcatttaatatctcatt 39683830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 3436083 - 3436183
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||| ||||||| | ||||||  |||  ||||| |||| ||| |||||| | || |||||||||||| |||||||| ||||||||| ||||    
T  3436083 ttgacattttacacaaaccaagacaatcaacaattaatactacttttgatgcaataaactatacttttactataataaccttattaatttaatatttcat 3436182  T
Q  239 t 239  Q
    |    
T  3436183 t 3436183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 44549871 - 44549771
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    |||| |||||| ||||| |||||  |||||| ||| |||||| |||| ||  ||||| || || ||||| |||||||||||||||||||||| |||||||    
T  44549871 ttgatattttatataaatcaaaacgatcaataattattactacttttgatacaataagttatacttttattataatgaccttattcatttaacatctcat 44549772  T
Q  239 t 239  Q
    |    
T  44549771 t 44549771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 52677225 - 52677261
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||||||||||||||||||||||||||||    
T  52677225 ttttactataatgaccttattcatttaatatctcatt 52677261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 233
Target Start/End: Original strand, 47596608 - 47596723
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||| | ||||||||||||| ||||||| | | ||||| | |||||||| |||| ||  |||||||| |  |||| | ||||| ||    
T  47596608 ttcctttttaattgtcattttttgacattttacacaaaccaataaagtcaataaatgttactacttttgatacaataaattatccttttccaataataac 47596707  T
Q  218 cttattcatttaatat 233  Q
    ||||||||||||||||    
T  47596708 cttattcatttaatat 47596723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 47751757 - 47751658
Alignment:
Q  140 tgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||| |||||||||||||  || | ||||||||||||| ||  ||||| |  || ||||||||||||    |||||||||||||||||||||    
T  47751757 tgacattttacacaaaccaaaataatttataaatgttactatttttgatacaataattgatacttttactataatagttttattcatttaatatctcatt 47751658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 36408969 - 36408851
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    |||||||  ||||| || ||||||||||||| ||||||| | ||| ||   ||| ||||| |||| ||| |||||  | || ||||||||||||||||||    
T  36408969 ctttttaattgtcacattttgacattttacacaaaccaagacaataaacatttgatactacttttgatgcaataagctatacttttactataatgacctt 36408870  T
Q  221 attcatttaatatctcatt 239  Q
    ||| ||| |||||||||||    
T  36408869 attaattcaatatctcatt 36408851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 36423135 - 36423017
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    |||||||  ||||| || ||||||||||||| ||||||| | ||| ||   ||| ||||| |||| ||| |||||  | || ||||||||||||||||||    
T  36423135 ctttttaattgtcacattttgacattttacacaaaccaagacaataaacatttgatactacttttgatgcaataagctatacttttactataatgacctt 36423036  T
Q  221 attcatttaatatctcatt 239  Q
    ||| ||| |||||||||||    
T  36423035 attaattcaatatctcatt 36423017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 233
Target Start/End: Original strand, 23621905 - 23621962
Alignment:
Q  176 tactattttttatgtaataaattgtatttttactataatgaccttattcatttaatat 233  Q
    ||||| |||| ||| |||||| | || |||||||||||||||||||||||||||||||    
T  23621905 tactacttttgatgcaataaactatacttttactataatgaccttattcatttaatat 23621962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 50623638 - 50623542
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||| ||||||| | ||||||  |||| ||||| |||| ||  |||||  | || |||||||||||||||||||||||||| ||||||||||    
T  50623638 acattttacacaaaccaagacaatcaaaaattgatactacttttgatacaataagctatacttttactataatgaccttattcattt-atatctcatt 50623542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 8741704 - 8741740
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||| |||||||||||||||||||||||||||||||    
T  8741704 ttttattataatgaccttattcatttaatatctcatt 8741740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 47428693 - 47428657
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||||||||||| |||||||||||||||||||||    
T  47428693 ttttactataatgacattattcatttaatatctcatt 47428657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 233
Target Start/End: Original strand, 23719779 - 23719894
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||| || | |||||||||||||||||| || | | ||||| | | |||||| |||| ||  |||||  | || |||||||||||| ||    
T  23719779 ttcctttttaattgttattttttgacattttacataaactaagacattcaataaatattactacttttgatacaataatatatacttttactataataac 23719878  T
Q  218 cttattcatttaatat 233  Q
    ||||||||||||||||    
T  23719879 cttattcatttaatat 23719894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 235
Target Start/End: Original strand, 52257789 - 52257903
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    ||||||| ||||||  | |||||||||||||||||| || | | ||||| | ||||| | ||| ||||  ||||| || || ||||||||||||  ||||    
T  52257789 ctttttaactgtcactttttgacattttacataaactaagacactcaataaatgttattttttcttatacaataatttatacttttactataatagcctt 52257888  T
Q  221 attcatttaatatct 235  Q
    | |||||||||||||    
T  52257889 agtcatttaatatct 52257903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 36659434 - 36659543
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    |||||| | ||||||||||||| ||| ||| | ||||||| ||||||  ||||||| ||| ||||| || |  ||||||||||||||| || || || ||    
T  36659434 tgtcattttttgacattttacacaaatcaagacaatcaataattgtttttatttttaatgcaataagttatgcttttactataatgacattgtttatcta 36659533  T
Q  230 atatctcatt 239  Q
    | ||||||||    
T  36659534 acatctcatt 36659543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 235
Target Start/End: Complemental strand, 45725785 - 45725668
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||| | ||||||||||||| |||| || | | ||||| | |||||||| |||| ||  |||||||| |  |||| | ||||| ||    
T  45725785 ttcctttttaattgtcattttttgacattttacacaaacaaataaagtcaataaatgttactacttttgatacaataaattatcattttccaataataac 45725686  T
Q  218 cttattcatttaatatct 235  Q
    || |||||||||||||||    
T  45725685 ctcattcatttaatatct 45725668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 52677160 - 52677217
Alignment:
Q  117 attcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattg 174  Q
    |||||||||||  ||||| || ||||||||||||| ||||||||| ||||||| ||||    
T  52677160 attcctttttaattgtcacattttgacattttacacaaaccaaaacaatcaataattg 52677217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 19731452 - 19731488
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  19731452 ttttactataatgaccttattaatttaatatttcatt 19731488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 30939319 - 30939283
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  30939319 ttttactataatgaccttattaatttaatatttcatt 30939283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 42513106 - 42513142
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  42513106 ttttactatcatgaccttattcatttaatatcacatt 42513142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 47094016 - 47093940
Alignment:
Q  163 aatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||| |||||| ||| |||| ||| ||||| || || |||||||||||||| |||||| |||||| || |||||    
T  47094016 aatcaataattgtttctacttttgatgcaataagttatacttttactataatgatcttattaatttaacatatcatt 47093940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 4654965 - 4654844
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||  || ||||||||||||||||||||||||| |||||||||||||||| |||| ||| ||||| |||| ||||||||||||||||    
T  4654965 ttcctttttaattgtctcattttgacattttacataaaccaaaatagtcaatgattgttactacttttgatgcaataagttgtgtttttactataatgac 4654866  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  4654865 cttattcatttaatatctcatt 4654844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 117 - 239
Target Start/End: Complemental strand, 4883850 - 4883728
Alignment:
Q  117 attcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatga 216  Q
    |||||||||||  ||||| || |||||||||||||||||| || |||  ||||||||||||||| |||| ||||||||| ||||| ||||||||||||||    
T  4883850 attcctttttaattgtcacattttgacattttacataaactaatatagccaatgattgttactacttttgatgtaataagttgtacttttactataatga 4883751  T
Q  217 ccttattcatttaatatctcatt 239  Q
    |||||||||||||||||||||||    
T  4883750 ccttattcatttaatatctcatt 4883728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 11222313 - 11222434
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||||||||||| ||| |||||||||||||||| |||| ||| ||||| ||||| ||||| |||||||||    
T  11222313 ttcctttttaattgtcacattttgacattttacataaaccaagatagtcaatgattgttactacttttgatgcaataagttgtacttttaatataatgac 11222412  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  11222413 cttattcatttaatatctcatt 11222434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 239
Target Start/End: Original strand, 36404837 - 36404959
Alignment:
Q  117 attcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatga 216  Q
    |||| ||||||  ||||| || |||| ||||||||| |||||| ||| |||||||||||||||| |||| ||| ||||| || ||||||||||||||| |    
T  36404837 attcatttttaattgtcacattttgatattttacatgaaccaagatagtcaatgattgttactacttttgatgcaataagttatatttttactataataa 36404936  T
Q  217 ccttattcatttaatatctcatt 239  Q
    |||||||||||||||||||||||    
T  36404937 ccttattcatttaatatctcatt 36404959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 15182998 - 15183119
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| ||||||||  |||| ||||| |||| ||| |||||  | ||||||||||||||||||    
T  15182998 ttcctttttaattgtcacattttgacattttacacaaaccaagataatcaacaattgatactacttttgatgcaataagctatatttttactataatgac 15183097  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  15183098 cttattcatttaatatctcatt 15183119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 34357424 - 34357303
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || | ||||||||||| ||||||| ||||||||  |||  |||||||||| ||| ||||| || ||||||||||||||||||    
T  34357424 ttcctttttaattgtcacatttcgacattttacacaaaccaagataatcaacaatttatactatttttgatgcaataagttatatttttactataatgac 34357325  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  34357324 cttattcatttaatatctcatt 34357303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 30264599 - 30264720
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||||||||||| | ||||||  |||| ||||| |||| ||| |||||| | || |||||||||||||||    
T  30264599 ttcctttttaattgtcacattttgacattttacataaaccaagacaatcaacaattgatactacttttgatgcaataaactatacttttactataatgac 30264698  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||||||||||||| |||||    
T  30264699 cttattcatttaatatttcatt 30264720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 235
Target Start/End: Complemental strand, 44360679 - 44360562
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| | ||||||| |||||||||| |||| ||| ||||| || || ||||| |||||||||    
T  44360679 ttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaataattgttactacttttgatgcaataagttatacttttattataatgac 44360580  T
Q  218 cttattcatttaatatct 235  Q
    ||||||||||||||||||    
T  44360579 cttattcatttaatatct 44360562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 239
Target Start/End: Original strand, 14295749 - 14295875
Alignment:
Q  113 ctcaattcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactata 212  Q
    |||||||||||||||  ||||| || ||||||||||||| ||||||| | ||||||  |||| ||||| |||| ||| |||||  | || ||||||||||    
T  14295749 ctcaattcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataaggtatacttttactata 14295848  T
Q  213 atgaccttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||| |||||    
T  14295849 atgaccttattcatttaatatttcatt 14295875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 38186053 - 38186170
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    |||||||| ||||| || |||| |||||||| |||| || | ||||||  |||| || ||||||| |||||||||| | |||||||||||||||||||||    
T  38186053 ctttttat-tgtcacattttgatattttacacaaactaagacaatcaacaattgatattatttttgatgtaataaactatatttttactataatgacctt 38186151  T
Q  221 attcatttaatatctcatt 239  Q
    |||||||||||||||||||    
T  38186152 attcatttaatatctcatt 38186170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 478994 - 479091
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||| ||||||| ||||||||| |||| ||||| |||| ||| |||||  | || |||||||||||||||||||||||||||||||||||||    
T  478994 acattttacacaaaccaagataatcaataattgatactacttttgatgcaataagctatacttttactataatgaccttattcatttaatatctcatt 479091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 14308636 - 14308518
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    |||||||  ||||| || ||||||||||||| ||||||| | ||||||  |||| ||||| |||| ||| |||||  | || ||||||||||||||||||    
T  14308636 ctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgacctt 14308537  T
Q  221 attcatttaatatctcatt 239  Q
    |||||||||||||||||||    
T  14308536 attcatttaatatctcatt 14308518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 19594593 - 19594475
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    |||||||  ||||| || ||||||||||||| |||| || ||||||||  |||| || || |||| ||| |||||  | |||||||||||||||||||||    
T  19594593 ctttttaattgtcacattttgacattttacacaaacaaagataatcaacaattgatattacttttgatgcaataagctatatttttactataatgacctt 19594494  T
Q  221 attcatttaatatctcatt 239  Q
    |||||||||||||||||||    
T  19594493 attcatttaatatctcatt 19594475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 3363830 - 3363709
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||  || ||||||||||||| ||||||| | ||||||| |||| ||||| |||| ||| |||||  | || |||||||||||||||    
T  3363830 ttcctttttaattgtcgcattttgacattttacacaaaccaagacaatcaataattgatactacttttgatgcaataagctatacttttactataatgac 3363731  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| |||||||||||||||    
T  3363730 cttattgatttaatatctcatt 3363709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 10263990 - 10263882
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    |||||||| ||||||||||||| ||||||| | || |||  |||| ||||| |||| ||| |||||| | || |||||||||||||||||||||||||||    
T  10263990 tgtcatattttgacattttacacaaaccaagacaaccaaa-attgatactacttttgatgcaataaactatacttttactataatgaccttattcattta 10263892  T
Q  230 atatctcatt 239  Q
    ||||||||||    
T  10263891 atatctcatt 10263882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 10812445 - 10812324
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| | ||||||  |||| ||||| |||| |||  ||||  | || |||||||||||||||    
T  10812445 ttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgccataagctatacttttactataatgac 10812346  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  10812345 cttattcatttaatatctcatt 10812324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 26342826 - 26342705
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||  | ||||||||||||| ||||||| | ||||||  |||| ||||| |||| ||| |||||  | || |||||||||||||||    
T  26342826 ttcctttttaattgtcacgttttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgac 26342727  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  26342726 cttattcatttaatatctcatt 26342705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 34399448 - 34399327
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  | ||| || |||||| |||||| ||||||| | ||||||  |||| ||||| |||| ||| |||||| | || |||||||||||||||    
T  34399448 ttcctttttaattatcacattttgacactttacacaaaccaagacaatcaacaattgatactacttttgatgcaataaactatacttttactataatgac 34399349  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  34399348 cttattcatttaatatctcatt 34399327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 36375819 - 36375698
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| | ||||||  |||| |||||  ||| ||| |||||  | || |||||||||||||||    
T  36375819 ttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacctttgatgcaataagctataattttactataatgac 36375720  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  36375719 cttattcatttaatatctcatt 36375698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 41885859 - 41885750
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    ||||| || ||||||||||||| ||||||| | ||||||  |||| ||||| |||| ||| |||||  |||| ||||||| |||||||||||||||||||    
T  41885859 tgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctgtacttttactgtaatgaccttattcattta 41885760  T
Q  230 atatctcatt 239  Q
    ||||||||||    
T  41885759 atatctcatt 41885750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 11560065 - 11560165
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||||||||||| | ||||||  |||| || || |||| |||||||||  |||| |||||||||||| | |||||||||||||||||||||    
T  11560065 ttgacattttacataaaccaagacaatcaacaattgatattacttttgatgtaataagctgtacttttactataattatcttattcatttaatatctcat 11560164  T
Q  239 t 239  Q
    |    
T  11560165 t 11560165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 3376274 - 3376395
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||| ||| | ||||||| |||| ||||| |||| || ||||||  | |||||||| |||||| ||    
T  3376274 ttcctttttaattgtcacattttgacattttacacaaatcaagacaatcaataattgatactacttttaatataataagctatatttttattataataac 3376373  T
Q  218 cttattcatttaatatctcatt 239  Q
     |||||||||||||||||||||    
T  3376374 attattcatttaatatctcatt 3376395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 15893577 - 15893698
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || |||| |||||||| ||||||| | ||||||  |||| ||||| |||| ||| |||||  | || |||||||||||| ||    
T  15893577 ttcctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactataataac 15893676  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  15893677 cttattcatttaatatctcatt 15893698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 14288632 - 14288556
Alignment:
Q  163 aatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||| |||| ||||| |||||||| |||||  | || |||||||||||||||||||||||||||||||||||||    
T  14288632 aatcaataattgatactactttttatgcaataagctatacttttactataatgaccttattcatttaatatctcatt 14288556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 37093693 - 37093575
Alignment:
Q  120 cctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacct 219  Q
    ||||||||  ||||| || ||||||||||||| ||||||| | ||| ||  |||| ||||| |||| ||| ||||| || || |||||||||||||| ||    
T  37093693 cctttttaattgtcacattttgacattttacacaaaccaagacaattaacaattgatactacttttgatgcaataagttatacttttactataatga-ct 37093595  T
Q  220 tattcatttaatatctcatt 239  Q
    ||||||||||||||||||||    
T  37093594 tattcatttaatatctcatt 37093575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 25558204 - 25558304
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||| ||||||| | ||||||  |||| ||||| |||| ||  |||||  |  | ||||||||||||||||||||||||||||||||||||    
T  25558204 ttgacattttacacaaaccaagacaatcaaaaattgatactacttttgatacaataagctagacttttactataatgaccttattcatttaatatctcat 25558303  T
Q  239 t 239  Q
    |    
T  25558304 t 25558304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 239
Target Start/End: Complemental strand, 36824590 - 36824516
Alignment:
Q  165 tcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||| ||||||||||||||| ||| ||||| ||| | ||||||| |||||| |||||| |||||||||||||||    
T  36824590 tcaataattgttactatttttaatgcaataagttgcacttttactgtaatgatcttatttatttaatatctcatt 36824516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 38072229 - 38072344
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||| |||||||| || |||||||||| ||||||||| ||||||  |||| ||||| |||| ||| |||||  | |||      ||||||||     
T  38072229 ttcctttttatttgtcatattttaacattttacacaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatat------tataatgaa 38072322  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  38072323 cttattcatttaatatctcatt 38072344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 4952693 - 4952814
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||  | |||||||||||||||||||||||| |||||| | |||||||| |||| ||   ||   || || ||||||||||| | |    
T  4952693 ttcctttttaattgtcactttttgacattttacataaaccaaaatgatcaataaatgttactacttttaatactattgtttttacttttactataacggc 4952792  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| ||||||||| |||||    
T  4952793 cttattaatttaatatttcatt 4952814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 239
Target Start/End: Complemental strand, 9370224 - 9370099
Alignment:
Q  114 tcaattcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataa 213  Q
    |||||| |||||||  |||||  | ||||||||||||||||||||| |  || ||| | |||||||| |||| ||  |||   || || |||||||||||    
T  9370224 tcaatttctttttaattgtcactttttgacattttacataaaccaagaccattaataagtgttactacttttgatacaattgtttttacttttactataa 9370125  T
Q  214 tgaccttattcatttaatatctcatt 239  Q
    |||||||||| ||||||||| |||||    
T  9370124 tgaccttattaatttaatatttcatt 9370099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 9707033 - 9706912
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||  | ||||||||||||| ||||||| | ||||||| | | |||||| |||| ||  ||||  |  || |||||||||||| ||    
T  9707033 ttcctttttaattgtcactttttgacattttacacaaaccaatacaatcaataaatattactacttttgatacaatatttcatacttttactataataac 9706934  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||| ||||||||||    
T  9706933 cttattcatttgatatctcatt 9706912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 13965853 - 13965732
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||  | ||||||||||||| ||||||| | ||||||| ||||||  ||  ||| ||  ||||| || |  |||||||||||||||    
T  13965853 ttcctttttaattgtcactttttgacattttacacaaaccaagacaatcaataattgtttttacatttgatccaataagttatgcttttactataatgac 13965754  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||| ||||||||| ||||||||    
T  13965753 cttgttcatttaacatctcatt 13965732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 32543808 - 32543905
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||||||||||| ||||||| | | |||||| |||||||  ||||| |  || ||||| ||||||    |||||||||||||||||||||    
T  32543808 acattttacataaaccaaaacaatcaataaatattactaatttttatacaataattgatacttttaatataatagttttattcatttaatatctcatt 32543905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 14541492 - 14541456
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||| ||||||||||||||||||||||||    
T  14541492 ttttactataataaccttattcatttaatatctcatt 14541456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 239
Target Start/End: Original strand, 15677341 - 15677409
Alignment:
Q  171 attgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||| ||||| |||| ||| ||||| || || ||||| |||||||||||||||||||||||||| ||||    
T  15677341 attgatactacttttgatgcaataagttatacttttattataatgaccttattcatttaatatcacatt 15677409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 231
Target Start/End: Original strand, 34884556 - 34884648
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaat 231  Q
    ||||||||||||| ||||||| ||||||||| | | |||||| |||| ||  |||   || || ||||||||||||||||||||| |||||||    
T  34884556 ttgacattttacacaaaccaagataatcaataaatattactacttttgatacaattgtttttacttttactataatgaccttattaatttaat 34884648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 239
Target Start/End: Original strand, 28145655 - 28145690
Alignment:
Q  204 tttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||||| |||||||||||||||||||||    
T  28145655 tttactataatgacattattcatttaatatctcatt 28145690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 232
Target Start/End: Original strand, 928043 - 928144
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    |||||||| ||||| |||||||||||| || ||||  |||  || ||||||||||| |||||| || || | ||||| ||||||| |||||| |||||||    
T  928043 tgtcatattttgactttttacataaactaagataacaaatactt-ttactatttttgatgtaacaatttatctttttcctataataaccttaatcattta 928141  T
Q  230 ata 232  Q
    |||    
T  928142 ata 928144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 235
Target Start/End: Original strand, 31011715 - 31011831
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||| | || ||||||||||| | ||||||| | ||||||| | |||| ||| |||| ||  ||||| || ||||||||||||||| ||    
T  31011715 ttcctttttaattgttacattttgacattttatacaaaccaagacaatcaataaatgttgctacttttgatacaataa-ttctatttttactataataac 31011813  T
Q  218 cttattcatttaatatct 235  Q
    ||| || |||||||||||    
T  31011814 cttgtttatttaatatct 31011831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 8443852 - 8443816
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  8443852 ttttactataatgaccttattaatttaatatttcatt 8443816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 13215618 - 13215522
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatct 235  Q
    ||||||||||||| ||||||| | | ||||| | |||||||| |||| ||  ||| |  ||||||||||||||||| ||| |||| |||||| ||||    
T  13215618 ttgacattttacacaaaccaatacactcaataaatgttactacttttgatacaatgatatgtatttttactataataaccctattaatttaaaatct 13215522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 13754181 - 13754081
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattg-tatttttactataatgaccttattcatttaatatctca 237  Q
    ||||||||||||| ||||||| | ||||| | | |||||||| |||| ||  ||||| ||  || ||||||||||||  ||||||||||||||||| |||    
T  13754181 ttgacattttacacaaaccaagacaatcattaaatgttactacttttgatacaataatttactacttttactataatagccttattcatttaatatttca 13754082  T
Q  238 t 238  Q
    |    
T  13754081 t 13754081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 4e-34; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 5732070 - 5732191
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||||||||||| ||| |||||||||||||||| |||| ||| ||||| ||||| |||||||||||||||    
T  5732070 ttcctttttaattgtcacattttgacattttacataaaccaagatagtcaatgattgttactacttttgatgcaataagttgtacttttactataatgac 5732169  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||| ||||||||    
T  5732170 cttattcatttaaaatctcatt 5732191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 33921771 - 33921892
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || || ||||||||||||||| || ||| |||||||||||||||| |||| ||| |||||||| ||||||||||||||||||    
T  33921771 ttcctttttaattgtcacattttaacattttacataaactaagatagtcaatgattgttactacttttgatgcaataaattatatttttactataatgac 33921870  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  33921871 cttattcatttaatatctcatt 33921892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 33174053 - 33173932
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||||||||||||||| |||||||||||||||| |||| ||  ||||| ||||| ||||| ||||||||     
T  33174053 ttcctttttaattgtcacattttgacattttacataaaccaaaatagtcaatgattgttactacttttgatacaataagttgtacttttaatataatgat 33173954  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||| ||||||||    
T  33173953 cttattcatttaaaatctcatt 33173932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 7477216 - 7477316
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    |||||||||||||||||| || ||| |||||||||||||||| |||| ||| ||||| || || ||||||||||||||||||||| ||||||||||||||    
T  7477216 ttgacattttacataaactaagatagtcaatgattgttactacttttgatgcaataagttatacttttactataatgaccttattaatttaatatctcat 7477315  T
Q  239 t 239  Q
    |    
T  7477316 t 7477316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 44480160 - 44480260
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||| ||||||| | ||||||  |||| |||||||||||||| |||||  | |||||||||||||||||||||||||||||||||||||||    
T  44480160 ttgacattttacacaaaccaagacaatcaacaattgatactattttttatgcaataagctatatttttactataatgaccttattcatttaatatctcat 44480259  T
Q  239 t 239  Q
    |    
T  44480260 t 44480260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 36298183 - 36298288
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    ||||| || ||||||||||||| ||| ||||| ||||||| |||||||||| |||| ||| ||||| || |||||||||||||||||| |||||||||||    
T  36298183 tgtcacattttgacattttacacaaatcaaaacaatcaataattgttactacttttgatgcaataagttatatttttactataatgactttattcattta 36298282  T
Q  230 atatct 235  Q
    ||||||    
T  36298283 atatct 36298288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 26724149 - 26724053
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatct 235  Q
    ||||||||||||| ||||||| | ||||||||||| |||||| |||| ||| ||||| || || |||||||||||||||||||||||||||||||||    
T  26724149 ttgacattttacacaaaccaagacaatcaatgattattactacttttgatgcaataagttatacttttactataatgaccttattcatttaatatct 26724053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 31430805 - 31430684
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| | ||||||  |||| |||||||||| ||| |||||  | || |||||||||||| ||    
T  31430805 ttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactatttttcatgcaataagctatacttttactataataac 31430706  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  31430705 cttattcatttaatatctcatt 31430684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 239
Target Start/End: Complemental strand, 41891514 - 41891395
Alignment:
Q  120 cctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacct 219  Q
    ||||||||  ||||| || ||||||||||||| ||||||| | ||||||  |||| ||||| |||| ||| ||||| || || |||||||||||||||||    
T  41891514 cctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactaattttgatgcaataagttatacttttactataatgacct 41891415  T
Q  220 tattcatttaatatctcatt 239  Q
    |||||||||||||| |||||    
T  41891414 tattcatttaatatatcatt 41891395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 37353886 - 37353988
Alignment:
Q  137 tgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctc 236  Q
    |||||||||||||||| || ||||| ||||||| |||||||||| || | ||| ||||| ||  |||||||||||||||||||||||||||||| || ||    
T  37353886 tgttgacattttacatgaatcaaaacaatcaataattgttactacttctgatgcaataagttacatttttactataatgaccttattcatttaacatttc 37353985  T
Q  237 att 239  Q
    |||    
T  37353986 att 37353988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 33099844 - 33099953
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    ||||| || |||| |||||||| ||||||| | ||||||  |||| ||||| |||| ||| ||||| || || |||||||||||||||||||||||||||    
T  33099844 tgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagttatacttttactataatgaccttattcattta 33099943  T
Q  230 atatctcatt 239  Q
    ||||||||||    
T  33099944 atatctcatt 33099953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 118 - 233
Target Start/End: Original strand, 41675184 - 41675298
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||||||||||| | ||||||| |||| | |||||||| ||| |||||  | || ||||||||||| |||    
T  41675184 ttcctttttaattgtcacattttgacattttacataaaccaagacaatcaataattgat-ctatttttgatgcaataagctatagttttactataacgac 41675282  T
Q  218 cttattcatttaatat 233  Q
    ||||||||||||||||    
T  41675283 cttattcatttaatat 41675298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 8382072 - 8381951
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  | ||| || ||||||||||||| ||||||| | ||||||  |||| || || |||| ||| |||||  | || |||||||||||||||    
T  8382072 ttcctttttaattatcacattttgacattttacacaaaccaagacaatcaacaattgatattacttttgatgcaataagatatacttttactataatgac 8381973  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  8381972 cttattcatttaatatctcatt 8381951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 239
Target Start/End: Complemental strand, 3838109 - 3837987
Alignment:
Q  117 attcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatga 216  Q
    |||||||||||  |||||  | ||||||||||||  ||| ||| | ||||||| ||||||| || |||| |||  |||| || || ||||||||||||||    
T  3838109 attcctttttaattgtcactttttgacattttacgcaaatcaagacaatcaataattgttattacttttgatgccataagttatacttttactataatga 3838010  T
Q  217 ccttattcatttaatatctcatt 239  Q
    |||||||||||||| ||||||||    
T  3838009 ccttattcatttaacatctcatt 3837987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 36922486 - 36922364
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactatttttt-atgtaataaattgtatttttactataatga 216  Q
    ||||||||||  ||||| || ||||||||||| ||||| ||| | ||||||  |||| || || ||||| ||| |||||  | | |||||||||||||||    
T  36922486 ttcctttttaattgtcacattttgacattttaaataaatcaagacaatcaacaattgatattactttttgatgcaataagctatgtttttactataatga 36922387  T
Q  217 ccttattcatttaatatctcatt 239  Q
    |||||||||||||||||||||||    
T  36922386 ccttattcatttaatatctcatt 36922364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 7312851 - 7312742
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    ||||| || |||| |||||||| ||| ||| | ||||||  |||| ||||| |||| ||| ||||| || || ||||||||||||||||||||| |||||    
T  7312851 tgtcacattttgatattttacacaaatcaagacaatcaacaattgatactacttttgatgcaataagttatacttttactataatgaccttatttattta 7312752  T
Q  230 atatctcatt 239  Q
    ||||||||||    
T  7312751 atatctcatt 7312742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 8265183 - 8265074
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    ||||| || |||| |||||||| ||||||| | ||||||  |||| ||||  |||| ||| |||||| | ||||||||||||||| |||||||| |||||    
T  8265183 tgtcacattttgaaattttacacaaaccaagacaatcaacaattgatactccttttgatgcaataaactatatttttactataataaccttattaattta 8265084  T
Q  230 atatctcatt 239  Q
    ||||||||||    
T  8265083 atatctcatt 8265074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 28608840 - 28608719
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||||| |||| |||||||| ||| ||| | ||||||| | |||| ||| |||| ||  ||||| || ||||||||||||||| ||    
T  28608840 ttcctttttaattgtcatattttgatattttacacaaatcaagacaatcaataaatgttgctacttttgatacaataatttttatttttactataataac 28608741  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| ||||||||| |||||    
T  28608740 cttatttatttaatatatcatt 28608719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 235
Target Start/End: Original strand, 30866733 - 30866850
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    |||||||||| ||||||| | ||||||||||||| ||||||| | | ||||| | ||||||| ||| ||||  ||||| || ||| |||||||||||  |    
T  30866733 ttcctttttaactgtcattttttgacattttacacaaaccaagacactcaataaatgttactttttcttatacaataatttatatgtttactataatagc 30866832  T
Q  218 cttattcatttaatatct 235  Q
    |||| |||||||||||||    
T  30866833 cttagtcatttaatatct 30866850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 6799665 - 6799585
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaatt 198  Q
    ||||||||||  ||||| |||||||||||||||||||||||| | | ||| ||||||||||||||||| |||  |||||||    
T  6799665 ttcctttttaattgtcacatgttgacattttacataaaccaagacagtcagtgattgttactatttttgatgcgataaatt 6799585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 29497552 - 29497648
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatct 235  Q
    ||||||||||||| ||||||  | ||||||  |||| ||||| ||||||||  ||||  | || |||||||||||||||||||||||||||||||||    
T  29497552 ttgacattttacacaaaccaggacaatcaacaattgatactactttttatgccataagctatacttttactataatgaccttattcatttaatatct 29497648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 31398954 - 31399049
Alignment:
Q  143 cattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||||||||||||| | ||| ||  |||| ||||| |||| || ||||||| | || |||||||||||||||||||||||||| ||||||||||    
T  31398954 cattttacataaaccaagacaattaaaaattgatactacttttgatataataaactatacttttactataatgaccttattcattt-atatctcatt 31399049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 239
Target Start/End: Original strand, 38168811 - 38168907
Alignment:
Q  144 attttacataaaccaaaataatcaatgatt-gttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||| ||||||| | ||||| | ||| |||||||||||| ||| ||||| || || ||||| |||||||||||||||||||||| ||||||||    
T  38168811 attttacacaaaccaagacaatcattaatttgttactatttttgatgcaataagttatacttttattataatgaccttattcatttaacatctcatt 38168907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 17896602 - 17896641
Alignment:
Q  200 tatttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  17896602 tatttttactataatgaccttattcatttaatatctcatt 17896641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 239
Target Start/End: Complemental strand, 18470527 - 18470432
Alignment:
Q  144 attttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||  ||||||| | ||||||  |||| ||||| |||||||| |||||  | || ||||||||||| |||||||||||||||||||||||||    
T  18470527 attttacgcaaaccaagacaatcaacaattgatactactttttatgcaataagctatacttttactataacgaccttattcatttaatatctcatt 18470432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 176 - 239
Target Start/End: Original strand, 26632235 - 26632298
Alignment:
Q  176 tactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||| ||| |||||  | || |||||||||||||||||||||||||||||||||||||    
T  26632235 tactatttttgatgcaataagctatacttttactataatgaccttattcatttaatatctcatt 26632298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 10227478 - 10227381
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||| ||| ||| | ||||||| ||| || ||| |||| ||| ||||| || || ||||||||||||||||||||| |||||| ||||||||    
T  10227478 acattttacacaaatcaagacaatcaataattatttctacttttgatgcaataagttatacttttactataatgaccttattaatttaacatctcatt 10227381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 22950815 - 22950936
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||| |||| ||||||||||||| ||||||| | ||| ||  |||| ||||| |||| ||  |||||  | || ||||| |||||||||    
T  22950815 ttcctttttaattgttatattttgacattttacacaaaccaagacaataaaaaattgatactacttttgatacaataagctatacttttattataatgac 22950914  T
Q  218 cttattcatttaatatctcatt 239  Q
     |||||||||||||||||||||    
T  22950915 attattcatttaatatctcatt 22950936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 32528337 - 32528446
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    |||||||| ||||||||||| | ||| ||| | ||||||  |||| | ||| |||| ||| |||||  | || |||||||||||||| ||||||||||||    
T  32528337 tgtcatattttgacattttatacaaatcaagacaatcaacaattgatgctacttttgatgcaataagctatacttttactataatgatcttattcattta 32528436  T
Q  230 atatctcatt 239  Q
    ||||||||||    
T  32528437 atatctcatt 32528446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 32966046 - 32966167
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || || |||||||||| |||  || | ||||||  |||| ||| | |||| ||| |||||  | || |||||||||||||||    
T  32966046 ttcctttttaattgtcacattttaacattttacacaaattaagacaatcaacaattgataccacttttgatgcaataagctatacttttactataatgac 32966145  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  32966146 cttattcatttaatatctcatt 32966167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 33258127 - 33258006
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||| | ||||||||||||| ||| ||| | ||||||| | | |||||| |||| ||  ||||  |  || |||||||||||| ||    
T  33258127 ttcctttttaattgtcattttttgacattttacacaaatcaatacaatcaataaatattactacttttgatacaatacttcatacttttactataataac 33258028  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  33258027 cttattcatttaatatctcatt 33258006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 47408359 - 47408238
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||  | ||||||||||||| ||||||| | | ||||| | |||||||| |||| ||  |||||  | || |||||||||||| ||    
T  47408359 ttcctttttaattgtcactttttgacattttacacaaaccaagacattcaataaatgttactacttttgatacaataatatatacttttactataataac 47408260  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||||||||||||| |||||    
T  47408259 cttattcatttaatatttcatt 47408238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 35746666 - 35746763
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||||||||||  || | ||||||| | ||||||||||||| ||  ||| | || || ||||||||||||| ||||||| ||||||||| |||||    
T  35746666 acattttacataaattaagacaatcaataaatgttactatttttgatacaattatttttacttttactataatggccttattaatttaatatttcatt 35746763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 20035209 - 20035173
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||||| ||||||||||||||||||||||    
T  20035209 ttttactataatgatcttattcatttaatatctcatt 20035173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 20045620 - 20045584
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||||| ||||||||||||||||||||||    
T  20045620 ttttactataatgatcttattcatttaatatctcatt 20045584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 233
Target Start/End: Complemental strand, 3310377 - 3310347
Alignment:
Q  203 ttttactataatgaccttattcatttaatat 233  Q
    |||||||||||||||||||||||||||||||    
T  3310377 ttttactataatgaccttattcatttaatat 3310347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 235
Target Start/End: Original strand, 8380589 - 8380706
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    |||||||||| |||||   | |||| |||||||| ||||||| | | ||||| | ||||||  ||| ||||  ||||| || || |||||||||||| ||    
T  8380589 ttcctttttaactgtccatttttgatattttacacaaaccaagacactcaataaatgttaccttttcttatacaataatttttacttttactataataac 8380688  T
Q  218 cttattcatttaatatct 235  Q
    |||| |||||||||||||    
T  8380689 cttagtcatttaatatct 8380706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 31815066 - 31815186
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||| | || |||||||||| ||| ||| ||||||||| || ||||||| |||| ||  ||| | || || |||||||||||||      
T  31815066 ttcctttttaattgtcattttttaacattttacacaaatcaagataatcaataat-gttactacttttgatacaattatttttacttttactataatggt 31815164  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| ||||||||| |||||    
T  31815165 cttattaatttaatatttcatt 31815186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 36648026 - 36648123
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||| ||||||| | ||||||| ||| ||  || |||| ||| ||||| || |  |||||||||||||||||| || |||||| ||||||||    
T  36648026 acattttacacaaaccaagacaatcaataattatttttacttttgatgcaataagttatgcttttactataatgaccttgttaatttaacatctcatt 36648123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 35112654 - 35112554
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||| |||| || | ||||||| | | |||||| |||| ||  ||||  |  ||||||||||||||| || ||||| ||||||||||||||    
T  35112654 ttgacattttacacaaacaaatacaatcaataaatattactacttttgatacaatacttcatatttttactataataactttatttatttaatatctcat 35112555  T
Q  239 t 239  Q
    |    
T  35112554 t 35112554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 4e-34; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 13699420 - 13699299
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  || ||||| ||||||||||||||||||||| ||| |||||||||||||||| |||| ||| ||||| || || |||||||||||||||    
T  13699420 ttcctttttaattgccatattttgacattttacataaaccaagatagtcaatgattgttactacttttgatgcaataagttatacttttactataatgac 13699321  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  13699320 cttattcatttaatatctcatt 13699299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 117 - 235
Target Start/End: Original strand, 2059802 - 2059920
Alignment:
Q  117 attcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatga 216  Q
    |||||||||||  ||||| || ||||||||||||| ||||||||||||||||| ||||||||||  ||| ||| ||||| || || ||| ||||||||||    
T  2059802 attcctttttaattgtcacattttgacattttacacaaaccaaaataatcaataattgttactacatttgatgcaataagttatactttcactataatga 2059901  T
Q  217 ccttattcatttaatatct 235  Q
    |||||||||||||||||||    
T  2059902 ccttattcatttaatatct 2059920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 10676148 - 10676027
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  | ||| || ||||||||||||||||| ||| ||| ||||||||||||| || |||| ||| ||||| ||||| |||||||||||| ||    
T  10676148 ttcctttttaattatcacattttgacattttacataaatcaatatagtcaatgattgttattacttttgatgcaataagttgtacttttactataataac 10676049  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| |||||||||||||||    
T  10676048 cttatttatttaatatctcatt 10676027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 12231062 - 12231183
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||||||||||| | ||||||  |||| ||||| |||| ||| |||||  |||| |||||||||||||||    
T  12231062 ttcctttttaattgtcacattttgacattttacataaaccaagacaatcaacaattgatactacttttgatgcaataagctgtacttttactataatgac 12231161  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||| ||||    
T  12231162 cttattcatttaatatcccatt 12231183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 13566925 - 13566804
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| | ||||||  |||| ||||| |||| ||| |||||  | ||||||||||||||||||    
T  13566925 ttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatatttttactataatgac 13566826  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  13566825 cttattcatttaatatctcatt 13566804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 35483784 - 35483893
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    |||||||| ||||||||||||| ||||||||| ||||||  |||| || ||||||| ||| |||||  | || |||||||||||||||||||||||||||    
T  35483784 tgtcatattttgacattttacacaaaccaaaacaatcaacaattgatattatttttgatgcaataagctatacttttactataatgaccttattcattta 35483883  T
Q  230 atatctcatt 239  Q
    ||||||||||    
T  35483884 atatctcatt 35483893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 37437044 - 37437165
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||||| ||||||||||||| ||||||| | ||||||| |||| ||| | |||| ||| |||||  | || |||||||||||||||    
T  37437044 ttcctttttaattgtcatattttgacattttacacaaaccaagacaatcaataattgataccacttttgatgcaataagctatacttttactataatgac 37437143  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  37437144 cttattcatttaatatctcatt 37437165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 32994481 - 32994581
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||| ||||||| | ||||||| ||| |||||| |||| ||| ||||| ||||| |||||||||||||||||||||||||||| |||||||    
T  32994481 ttgacattttacacaaaccaagacaatcaataattattactacttttgatgcaataagttgtacttttactataatgaccttattcatttaacatctcat 32994580  T
Q  239 t 239  Q
    |    
T  32994581 t 32994581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 1024802 - 1024681
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || |||| |||||||| ||||||||| ||||||  |||| ||||| |||| ||| |||||| | || ||||||||||||||     
T  1024802 ttcctttttaattgtcacattttgatattttacacaaaccaaaacaatcaacaattgatactacttttgatgcaataaactatacttttactataatgat 1024703  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  1024702 cttattcatttaatatctcatt 1024681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 235
Target Start/End: Original strand, 8464248 - 8464365
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||||||||||| | ||||||  |||| ||||| |||| ||| |||||  | || |||||||||||||||    
T  8464248 ttcctttttaattgtcacattttgacattttacataaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgac 8464347  T
Q  218 cttattcatttaatatct 235  Q
    ||||||||||||||||||    
T  8464348 cttattcatttaatatct 8464365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 29830999 - 29830878
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| | ||||||| |||| || || |||| ||| |||||  | || |||||||||||||||    
T  29830999 ttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaataattgatattacttttgatgcaataagctatacttttactataatgac 29830900  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  29830899 cttattcatttaatatctcatt 29830878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 43500752 - 43500631
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| | ||||||  |||| ||||| |||| ||| |||||  | || |||||||||||||||    
T  43500752 ttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgac 43500653  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  43500652 cttattcatttaatatctcatt 43500631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 45368313 - 45368213
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||| ||||||||| ||||||  |||| ||||| |||| ||| |||||  | || ||||||||||||||||||||||||||||||||||||    
T  45368313 ttgacattttacacaaaccaaaacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttattcatttaatatctcat 45368214  T
Q  239 t 239  Q
    |    
T  45368213 t 45368213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 117 - 239
Target Start/End: Original strand, 20605614 - 20605736
Alignment:
Q  117 attcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatga 216  Q
    |||| ||||||  |||||||| ||||||||||||| ||||||| | ||||||  |||| ||||| |||| ||| |||||  | || ||||| ||||||||    
T  20605614 attcatttttaattgtcatattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttattataatga 20605713  T
Q  217 ccttattcatttaatatctcatt 239  Q
    |||||||||||||||||||||||    
T  20605714 ccttattcatttaatatctcatt 20605736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 19349370 - 19349491
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| ||  |||||||||||| ||||||| | ||||||  |||| ||||| |||| ||| |||||  | || |||||||||||||||    
T  19349370 ttcctttttaattgtcacattctgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgac 19349469  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  19349470 cttattcatttaatatctcatt 19349491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 19929457 - 19929578
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||| | || |||||||||| ||||||| | ||||||| |||||| ||| |||| ||| ||||| || || |||||||||||||||    
T  19929457 ttcctttttaattgtcattttttaacattttacacaaaccaagacaatcaataattgtttctacttttgatgcaataagttatacttttactataatgac 19929556  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| |||||| ||||||||    
T  19929557 cttattaatttaacatctcatt 19929578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 30686657 - 30686536
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||  | |||| |||||||| ||||||| | ||||||  |||| ||||| |||| ||| ||||| || || |||||||||||||||    
T  30686657 ttcctttttaattgtcacgttttgatattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagttatacttttactataatgac 30686558  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  30686557 cttattcatttaatatctcatt 30686536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 39412526 - 39412623
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||| | ||||||||| ||||||| |||||| ||| |||| ||| ||||| || |||||||||||||||||||||||| |||||| ||||||||    
T  39412526 acattttatacaaaccaaaacaatcaataattgtttctacttttgatgcaataagttatatttttactataatgaccttattaatttaacatctcatt 39412623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 239
Target Start/End: Complemental strand, 1677443 - 1677323
Alignment:
Q  119 tcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacc 218  Q
    |||||||||  ||||| || ||||||||||||| ||| ||| | ||||||| |||| ||||| |||| ||| |||||  | || |||||||||| |||||    
T  1677443 tcctttttaattgtcacattttgacattttacacaaatcaagacaatcaataattgatactacttttaatgcaataagctatacttttactatattgacc 1677344  T
Q  219 ttattcatttaatatctcatt 239  Q
    |||||||||||||||||||||    
T  1677343 ttattcatttaatatctcatt 1677323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 38648700 - 38648582
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    |||||||  ||||| || ||||||||||||| ||| ||| | ||||||  |||| |||||||||| ||| |||||  | || ||||||||||||||||||    
T  38648700 ctttttaattgtcacattttgacattttacacaaatcaagacaatcaacaattgatactatttttgatgcaataagctatacttttactataatgacctt 38648601  T
Q  221 attcatttaatatctcatt 239  Q
    |||||||| ||||||||||    
T  38648600 attcatttgatatctcatt 38648582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 48508376 - 48508258
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    |||||||  ||||| || ||||||||||| | ||||||||||||||||| | ||||  || |||| ||  ||||| || ||||||||||||||| |||||    
T  48508376 ctttttaattgtcacattttgacattttatacaaaccaaaataatcaataaatgttgttacttttgatacaataatttttatttttactataataacctt 48508277  T
Q  221 attcatttaatatctcatt 239  Q
    ||| |||||||||||||||    
T  48508276 atttatttaatatctcatt 48508258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 31487770 - 31487891
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| | ||||||| | | || ||| |||| ||  ||||| || ||||||||||||||| ||    
T  31487770 ttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaataaatattgctacttttgatacaataatttctatttttactataataac 31487869  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||| |||||||||||||||    
T  31487870 cttatttatttaatatctcatt 31487891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 118 - 230
Target Start/End: Complemental strand, 7783196 - 7783084
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||| | ||||||| ||||||||  |||| ||||| |||| ||| ||| || | || |||||||||||||||    
T  7783196 ttcctttttaattgtcacattttgacattttatacaaaccaagataatcaacaattgatactacttttgatgcaattaactatacttttactataatgac 7783097  T
Q  218 cttattcatttaa 230  Q
    |||||||||||||    
T  7783096 cttattcatttaa 7783084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 35255711 - 35255611
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||||||||||| | ||||||| ||||||  || |||| ||| ||||| || |  |||||||||||||||||| ||||||||| |||||||    
T  35255711 ttgacattttacataaaccaagacaatcaataattgtttttacttttgatgcaataagttatgcttttactataatgaccttgttcatttaacatctcat 35255612  T
Q  239 t 239  Q
    |    
T  35255611 t 35255611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 118 - 234
Target Start/End: Original strand, 35531286 - 35531402
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| | ||||||  |||| ||||| |||| ||| |||||  | || |||||||||||||||    
T  35531286 ttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgac 35531385  T
Q  218 cttattcatttaatatc 234  Q
    ||||||||||| |||||    
T  35531386 cttattcatttgatatc 35531402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 28679209 - 28679146
Alignment:
Q  176 tactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||| |||| ||| |||||||| || |||||||||||||||||||||||||||||||||||||    
T  28679209 tactacttttgatgcaataaattatacttttactataatgaccttattcatttaatatctcatt 28679146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 37609295 - 37609413
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||||||| ||| | ||||||  |||| ||||   ||| ||| |||||  | || |||||||||||||||    
T  37609295 ttcctttttaattgtcacattttgacattttacataaatcaagacaatcaacaattgatact---tttgatgcaataagctatacttttactataatgac 37609391  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  37609392 cttattcatttaatatctcatt 37609413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 12124890 - 12124769
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||| ||||||||| ||| ||| ||||||||  |||| | ||| |||| ||| ||||| || || |||||||||||| |     
T  12124890 ttcctttttaattgtcacattttgccattttacacaaatcaagataatcaacaattgatgctacttttgatgcaataagttatacttttactataataat 12124791  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  12124790 cttattcatttaatatctcatt 12124769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 13508016 - 13507895
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  | ||| || ||||||||||||||||| ||| | ||||||| |||| ||||| |||  ||| |||||  | || |||||||||||||||    
T  13508016 ttcctttttaattatcacattttgacattttacataaatcaagacaatcaataattgatactactttggatgcaataagctatacttttactataatgac 13507917  T
Q  218 cttattcatttaatatctcatt 239  Q
     ||||| |||||||||||||||    
T  13507916 tttattaatttaatatctcatt 13507895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 13515204 - 13515083
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  | ||| || ||||||||||||||||| ||| | ||||||| |||| ||||| |||  ||| |||||  | || |||||||||||||||    
T  13515204 ttcctttttaattatcacattttgacattttacataaatcaagacaatcaataattgatactactttggatgcaataagctatacttttactataatgac 13515105  T
Q  218 cttattcatttaatatctcatt 239  Q
     ||||| |||||||||||||||    
T  13515104 tttattaatttaatatctcatt 13515083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 21927708 - 21927808
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||| |||| || | ||||||  |||| ||||| |||| ||| |||||  | || ||||||||||||||||||||||||||||||| ||||    
T  21927708 ttgacattttacacaaactaagacaatcaacaattgatactacttttgatgcaataagctatacttttactataatgaccttattcatttaatatttcat 21927807  T
Q  239 t 239  Q
    |    
T  21927808 t 21927808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 40926756 - 40926848
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttat 222  Q
    ||||| || ||||||||||||||||||||| | ||||||| |||||||||| |||| ||  ||||| || || ||||||||||| ||||||||    
T  40926756 tgtcacattttgacattttacataaaccaatacaatcaataattgttactacttttgatacaataagttatacttttactataacgaccttat 40926848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 50825585 - 50825684
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    |||||||||| || ||||||| | ||||||  |||| ||||| |||| ||| ||||| || || |||||||||||||||||||||||||||| |||||||    
T  50825585 ttgacatttttcacaaaccaagacaatcaac-attgctactacttttgatgcaataagttatacttttactataatgaccttattcatttaacatctcat 50825683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 51972293 - 51972393
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||| |||  || | |||||||  ||||||||| |||| ||| ||||| || || ||||||||||||||  ||||||||||||||||||||    
T  51972293 ttgacattttacacaaattaagacaatcaatagttgttactacttttgatgcaataagttatacttttactataatgatattattcatttaatatctcat 51972392  T
Q  239 t 239  Q
    |    
T  51972393 t 51972393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 1429530 - 1429409
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || |||| |||||||| |||| || | |||| |  | || ||||| |||| ||| |||||  | || |||||||||||||||    
T  1429530 ttcctttttaattgtcacattttgatattttacacaaactaagacaatctacaaatgatactacttttgatgcaataagctatacttttactataatgac 1429431  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  1429430 cttattcatttaatatctcatt 1429409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 18033901 - 18033938
Alignment:
Q  202 tttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18033901 tttttactataatgaccttattcatttaatatctcatt 18033938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 35700366 - 35700487
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||| |  ||| |||||||| ||| ||| | ||||||| | |||||||| |||| || |||||| |  || ||||||||||||  |    
T  35700366 ttcctttttaattgtcattttgtgatattttacacaaatcaagacaatcaataaatgttactacttttgatataataattgatacttttactataatagc 35700465  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  35700466 cttattcatttaatatctcatt 35700487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 235
Target Start/End: Complemental strand, 38597837 - 38597720
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    |||||||||| ||||||  | ||||||||||||| |||| || | | ||||| | ||||||| ||| ||||  ||||| || || |||||||||||| ||    
T  38597837 ttcctttttaactgtcactttttgacattttacacaaactaagacactcaataaatgttactttttcttatacaataatttatacttttactataataac 38597738  T
Q  218 cttattcatttaatatct 235  Q
    |||| |||||||||||||    
T  38597737 cttagtcatttaatatct 38597720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 235
Target Start/End: Complemental strand, 52749245 - 52749144
Alignment:
Q  134 atatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatat 233  Q
    |||| |||||||||||||  || ||| | ||||||  |||| |||||||||| ||| |||||| | || |||||||||||| | ||||||||||||||||    
T  52749245 atattttgacattttacacgaatcaagacaatcaacaattgatactatttttgatgcaataaactatacttttactataataatcttattcatttaatat 52749146  T
Q  234 ct 235  Q
    ||    
T  52749145 ct 52749144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 233
Target Start/End: Complemental strand, 5598291 - 5598186
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||||| ||||||||||||| ||||||| | ||||||| ||| |||||| |||| ||| ||          |||||||||||||||    
T  5598291 ttcctttttaattgtcatattttgacattttacacaaaccaagacaatcaataattattactacttttgatgcaa----------ttttactataatgac 5598202  T
Q  218 cttattcatttaatat 233  Q
    ||||||||||||||||    
T  5598201 cttattcatttaatat 5598186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 49497337 - 49497277
Alignment:
Q  179 tattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||| ||| ||||| || || |||||||||||||||||||||||||||||||| ||||    
T  49497337 tatttttgatgcaataagttatacttttactataatgaccttattcatttaatatcacatt 49497277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 233
Target Start/End: Complemental strand, 9127915 - 9127800
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||  | ||||||||||||| ||||||| | | ||||| | |||||||| |||| ||  |||||  | || |||||||||||| ||    
T  9127915 ttcctttttaattgtcactttttgacattttacacaaaccaagacattcaataaatgttactacttttgatacaataatatatacttttactataataac 9127816  T
Q  218 cttattcatttaatat 233  Q
    ||||||||||||||||    
T  9127815 cttattcatttaatat 9127800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 43952975 - 43952913
Alignment:
Q  177 actattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||| |||| ||||||||| || || |||||||||||||||||||||||||||| ||| ||||    
T  43952975 actacttttgatgtaataagttatacttttactataatgaccttattcatttaacatcgcatt 43952913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 45226571 - 45226689
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    |||||||  ||||| || ||||||||||| | |||  || | ||||||  |||| ||||| |||| |||||||||  | || ||||| ||||||||| ||    
T  45226571 ctttttaattgtcacattttgacattttatacaaattaagacaatcaacaattgatactacttttgatgtaataagctatacttttattataatgacttt 45226670  T
Q  221 attcatttaatatctcatt 239  Q
    |||||||||||||||||||    
T  45226671 attcatttaatatctcatt 45226689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 51974162 - 51974283
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||  | |||||||||||||  |||||||| | ||||| | | |||||| |||| ||  |||||  | || |||||||||||| ||    
T  51974162 ttcctttttaattgtcactttttgacattttacacgaaccaaaacattcaataaatattactacttttgatacaataatgtatacttttactataataac 51974261  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||||||||||||| |||||    
T  51974262 cttattcatttaatatttcatt 51974283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 24781810 - 24781846
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||||||||||| |||||    
T  24781810 ttttactataatgaccttattcatttaatatttcatt 24781846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 32348203 - 32348103
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||| ||||||| | ||||||| | | |||||| |||| ||  ||||  |  || |||||||| ||| |||||||||||||||||||||||    
T  32348203 ttgacattttacacaaaccaatacaatcaataaatattactacttttgatacaatacttcatacttttactagaataaccttattcatttaatatctcat 32348104  T
Q  239 t 239  Q
    |    
T  32348103 t 32348103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 239
Target Start/End: Complemental strand, 35605823 - 35605723
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||| ||||||| | ||||||| | | ||| || |||| || |||||  |  || |||||||||||| |||||||||||||||||| ||||    
T  35605823 ttgacattttacacaaaccaatacaatcaataaatattattaattttgatataatacttcatacttttactataataaccttattcatttaatatttcat 35605724  T
Q  239 t 239  Q
    |    
T  35605723 t 35605723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 44818615 - 44818579
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||| |||||||||||||||||||||||||||||    
T  44818615 ttttactgtaatgaccttattcatttaatatctcatt 44818579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 239
Target Start/End: Original strand, 30702280 - 30702402
Alignment:
Q  117 attcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatga 216  Q
    |||||||||||  |||||  | ||||||||||||| ||||||| | ||||||| | |||||| | |||| ||  ||||  || || |||||||||||| |    
T  30702280 attcctttttaattgtcactttttgacattttacacaaaccaatacaatcaataaatgttaccacttttgatacaatattttatacttttactataataa 30702379  T
Q  217 ccttattcatttaatatctcatt 239  Q
    | ||||| ||||| |||||||||    
T  30702380 cattatttatttattatctcatt 30702402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 235
Target Start/End: Complemental strand, 1428651 - 1428534
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    |||||||||| ||||||| | ||||||||||||| |||| || |||   ||| | ||||| | ||| ||||  ||||| || || ||||||||||||  |    
T  1428651 ttcctttttaactgtcattttttgacattttacacaaactaagatacctaataaatgttattttttcttatacaataatttatacttttactataatagc 1428552  T
Q  218 cttattcatttaatatct 235  Q
    |||| |||||||||||||    
T  1428551 cttagtcatttaatatct 1428534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 235
Target Start/End: Complemental strand, 9362219 - 9362102
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    |||||||||| ||||||  | ||||||||||| | ||| ||| | | ||||| | | ||||| ||| ||||  ||||| || || |||||||||||| ||    
T  9362219 ttcctttttaactgtcactttttgacattttatacaaatcaagacactcaataaattttactttttcttatacaataatttatacttttactataataac 9362120  T
Q  218 cttattcatttaatatct 235  Q
    |||| |||||||||||||    
T  9362119 cttagtcatttaatatct 9362102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 10507057 - 10506936
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||| |  ||| |||||||| ||| ||| | ||||||| | | |||||| |||| ||| ||||| |  || || |||||||||  |    
T  10507057 ttcctttttaattgtcattttgtgatattttacacaaatcaagacaatcaataaatattactacttttgatgcaataattgatacttgtactataatagc 10506958  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  10506957 cttattcatttaatatctcatt 10506936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 48265071 - 48265148
Alignment:
Q  162 taatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||| | |||| ||| |||| ||  ||||| || ||||||||||||||| |||||||| ||||||| |||||||    
T  48265071 taatcaataaatgttgctacttttgatacaataatttctatttttactataataaccttatttatttaatgtctcatt 48265148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 31588756 - 31588851
Alignment:
Q  143 cattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||||| ||||||| ||||||||  |||  ||||| |||| ||  |||||  | || ||||||||| |||||||||||||||| ||||||||||    
T  31588756 cattttacacaaaccaagataatcaaaaattaatactacttttgatacaataagctatacttttactatgatgaccttattcattt-atatctcatt 31588851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 118 - 233
Target Start/End: Original strand, 30416070 - 30416185
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  | |||||||||||||||||||||||||||| | ||||||| |||||||||| |||| ||  ||||| || || |||||||||||| ||    
T  30416070 ttcctttttaattatcatatgttgacattttacataaaccaagacaatcaataattgttactacttttgatacaataagttatacttttactataataac 30416169  T
Q  218 cttattcatttaatat 233  Q
    ||||||||||||||||    
T  30416170 cttattcatttaatat 30416185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 117 - 239
Target Start/End: Original strand, 17123979 - 17124101
Alignment:
Q  117 attcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatga 216  Q
    |||||||||||  ||||| || ||||||||||||| |||| || | ||||||| |||| ||||| |||| ||| ||||| || || ||||||||||||||    
T  17123979 attcctttttaattgtcacattttgacattttacacaaactaagacaatcaataattgatactacttttgatgcaataagttatacttttactataatga 17124078  T
Q  217 ccttattcatttaatatctcatt 239  Q
    |||||||||||||||||||||||    
T  17124079 ccttattcatttaatatctcatt 17124101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 235
Target Start/End: Complemental strand, 22050294 - 22050177
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| | ||||||| |||||||||| |||| ||| ||||| || || ||||| |||||||||    
T  22050294 ttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaataattgttactacttttgatgcaataagttatacttttattataatgac 22050195  T
Q  218 cttattcatttaatatct 235  Q
    ||||||||||||||||||    
T  22050194 cttattcatttaatatct 22050177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 26470718 - 26470839
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||  | ||||||||||||||||||||| | ||||||| |||||||||| |||| ||| ||||| || || |||||||||||||||    
T  26470718 ttcctttttaattgtcactttttgacattttacataaaccaagacaatcaataattgttactacttttgatgcaataagttatacttttactataatgac 26470817  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||| ||||||||| ||||||||    
T  26470818 cttgttcatttaacatctcatt 26470839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 3621836 - 3621715
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| | ||||||  |||| ||||| |||| ||| ||||| || || |||||||||||||||    
T  3621836 ttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagttatacttttactataatgac 3621737  T
Q  218 cttattcatttaatatctcatt 239  Q
     |||||||||||||||||||||    
T  3621736 attattcatttaatatctcatt 3621715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 1252391 - 1252295
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatct 235  Q
    ||||||||||| |||||| || | ||||||  |||| ||||| |||| |||||||||| | ||||||||||||||||||||||||||||||||||||    
T  1252391 ttgacattttatataaactaagacaatcaacaattgatactacttttgatgtaataaactatatttttactataatgaccttattcatttaatatct 1252295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 1751438 - 1751544
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    ||||| || ||||||||||||| ||| ||| ||||||||  |||| ||||| |||| ||| ||||| || || |||||||||||||||||||||||||||    
T  1751438 tgtcacattttgacattttacacaaatcaagataatcaacaattgatactacttttgatgcaataagttatacttttactataatgaccttattcattta 1751537  T
Q  230 atatctc 236  Q
    |||||||    
T  1751538 atatctc 1751544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 8992795 - 8992673
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgatt-gttactattttttatgtaataaattgtatttttactataatga 216  Q
    ||||||||||  ||||| || |||| |||||||| ||||||| ||||||| | ||| ||||||| |||| ||| ||||| || || ||||||||||||||    
T  8992795 ttcctttttaattgtcacattttgatattttacacaaaccaagataatcagtaatttgttactacttttgatgcaataagttatacttttactataatga 8992696  T
Q  217 ccttattcatttaatatctcatt 239  Q
    |||||||||||||| ||||||||    
T  8992695 ccttattcatttaacatctcatt 8992673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 9017242 - 9017120
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgatt-gttactattttttatgtaataaattgtatttttactataatga 216  Q
    ||||||||||  ||||| || |||| |||||||| ||||||| ||||||| | ||| ||||||| |||| ||| ||||| || || ||||||||||||||    
T  9017242 ttcctttttaattgtcacattttgatattttacacaaaccaagataatcagtaatttgttactacttttgatgcaataagttatacttttactataatga 9017143  T
Q  217 ccttattcatttaatatctcatt 239  Q
    |||||||||||||| ||||||||    
T  9017142 ccttattcatttaacatctcatt 9017120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 117 - 239
Target Start/End: Original strand, 23923707 - 23923829
Alignment:
Q  117 attcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatga 216  Q
    |||||||||||  ||||| || |||||||||| || ||||||| | ||||||  |||| ||||| |||| |||||||||  | || ||||||||||||||    
T  23923707 attcctttttaattgtcacattttgacattttgcacaaaccaagacaatcaacaattgatactacttttaatgtaataagctatacttttactataatga 23923806  T
Q  217 ccttattcatttaatatctcatt 239  Q
    ||||||||| |||||||||||||    
T  23923807 ccttattcagttaatatctcatt 23923829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 373957 - 373848
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    ||||| || ||||||||||||||||||||| | |||||   |||| ||||| |||| ||| |||||| | || |||||||||||||| ||||||||||||    
T  373957 tgtcacattttgacattttacataaaccaagacaatcagcaattgatactacttttgatgcaataaactatacttttactataatgatcttattcattta 373858  T
Q  230 atatctcatt 239  Q
    ||||||||||    
T  373857 atatctcatt 373848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 7632053 - 7632153
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||| ||||| ||| | ||||||| ||| ||||||||||| ||| ||||| || || ||||||||||||||||||||| |||||| |||||||    
T  7632053 ttgacattttatataaatcaagacaatcaataattattactatttttgatgcaataagttatacttttactataatgaccttatttatttaacatctcat 7632152  T
Q  239 t 239  Q
    |    
T  7632153 t 7632153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 17193404 - 17193283
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||  | ||||||||||| ||||||||| | ||||||  |||| | ||| |||| ||| ||||| || |  |||||||||||||||    
T  17193404 ttcctttttaattgtcacgttttgacattttatataaaccaagacaatcaacaattgatcctacttttgatgcaataagttattattttactataatgac 17193305  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  17193304 cttattcatttaatatctcatt 17193283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 24663625 - 24663504
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| | ||||||  |||| || || |||| ||| |||||  | || |||||||||||||||    
T  24663625 ttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatattacttttgatgcaataagctatacttttactataatgac 24663526  T
Q  218 cttattcatttaatatctcatt 239  Q
     |||||||||||||||||||||    
T  24663525 attattcatttaatatctcatt 24663504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 239
Target Start/End: Complemental strand, 3850563 - 3850445
Alignment:
Q  121 ctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgacctt 220  Q
    |||||||  ||||| || |||| |||||||| ||||||| | ||||||  |||| ||||| |||| |||  | ||  | |||||||||||||||||||||    
T  3850563 ctttttaattgtcacattttgatattttacacaaaccaagacaatcaacaattgatactacttttgatgccacaagctatatttttactataatgacctt 3850464  T
Q  221 attcatttaatatctcatt 239  Q
    |||||||||||||||||||    
T  3850463 attcatttaatatctcatt 3850445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 17836139 - 17836018
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || |||| |||||||| ||||||| | ||||||  |||| | ||| |||| ||| |||||  | || |||||||||||||||    
T  17836139 ttcctttttaattgtcacatattgatattttacacaaaccaagacaatcaacaattgattctacttttaatgcaataagctatacttttactataatgac 17836040  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||||||||||||| |||||    
T  17836039 cttattcatttaatatatcatt 17836018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 26485680 - 26485801
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||  | ||||||||||||||||||||| | | ||||| | |||||||| |||| ||  |||||  | || |||||||||||| ||    
T  26485680 ttcctttttaattgtcactttttgacattttacataaaccaagacattcaataaatgttactacttttgatacaataatatatacttttactataataac 26485779  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||||||||||||| |||||    
T  26485780 cttattcatttaatatttcatt 26485801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 8176655 - 8176558
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||| ||| ||| | ||||||| |||||| ||| |||| ||| ||||| || || ||||||||||||||||||||| |||||| || |||||    
T  8176655 acattttacacaaatcaagacaatcaataattgtttctacttttgatgcaataagttatacttttactataatgaccttattaatttaacatatcatt 8176558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 239
Target Start/End: Original strand, 9838117 - 9838238
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||| |  ||| |||||||| ||| ||||| ||||||| | |||||||| |||| ||  ||||| |  || ||||||||||||  |    
T  9838117 ttcctttttaattgtcattttgtgatattttacacaaatcaaaacaatcaataaatgttactacttttgatacaataattgatacttttactataatagc 9838216  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  9838217 cttattcatttaatatctcatt 9838238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 13597600 - 13597534
Alignment:
Q  173 tgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||| |||| || |||||| || ||||||||||||||| ||||| | ||||||||||||||||    
T  13597600 tgttactacttttgatataataatttatatttttactataataaccttttacatttaatatctcatt 13597534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 1924074 - 1923977
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||| ||||||||| ||||||||| | ||||| || |||| ||| ||||| || || |||||||||||     |||||||||||||||||||||    
T  1924074 acattttatataaaccaagataatcaataaatgttattaattttgatgaaataatttatacttttactataacagtattattcatttaatatctcatt 1923977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 23777542 - 23777421
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||  | ||||||||||||| ||||||| | | | ||| | |||||||| |||| ||  |||||  | || |||||||||||| ||    
T  23777542 ttcctttttaattgtcactttttgacattttacacaaaccaagacattaaataaatgttactacttttgatacaataatatatacttttactataataac 23777443  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||||||||||||| |||||    
T  23777442 cttattcatttaatatttcatt 23777421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 24635930 - 24635837
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatct 235  Q
    |||||||||| ||||||| ||||||||| | ||||||| ||| ||||  ||||| || ||  |||||||||||  ||||| |||||||||||||    
T  24635930 acattttacacaaaccaagataatcaataaatgttactttttcttatacaataatttatacatttactataatagccttagtcatttaatatct 24635837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 7056156 - 7056256
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcat 238  Q
    ||||||||||||| ||| ||| ||||||||| ||| ||  || |||| ||| ||||| || |  |||||||||||| |||||  ||||||||||||||||    
T  7056156 ttgacattttacacaaatcaagataatcaataattatttttacttttgatgcaataagttattcttttactataataaccttggtcatttaatatctcat 7056255  T
Q  239 t 239  Q
    |    
T  7056256 t 7056256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 7235601 - 7235565
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||| ||||||||||||||||||||||||    
T  7235601 ttttactataataaccttattcatttaatatctcatt 7235565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 233
Target Start/End: Complemental strand, 11129077 - 11128962
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  |||||  | ||||||||||||| ||| ||| | ||| ||| | |||||||| |||| ||  |||   || ||||||||||||||||||    
T  11129077 ttcctttttaattgtcactttttgacattttacacaaatcaagacaattaataaatgttactacttttgatacaattgtttttatttttactataatgac 11128978  T
Q  218 cttattcatttaatat 233  Q
    |||||| |||||||||    
T  11128977 cttattaatttaatat 11128962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 239
Target Start/End: Original strand, 17601217 - 17601256
Alignment:
Q  200 tatttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  17601217 tatttttactataataaccttatttatttaatatctcatt 17601256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 232
Target Start/End: Original strand, 22784687 - 22784777
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaata 232  Q
    |||||||||||||||||| ||| ||||| | || ||||| |||| ||  |||||  | || ||||||||||||  ||||||||||||||||    
T  22784687 acattttacataaaccaagatattcaataaatgatactacttttgatacaataatgtatacttttactataatagccttattcatttaata 22784777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 12732421 - 12732300
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || || |||||||||| ||| ||| | ||| ||  |||| ||||| |||| ||| |||||  | || ||||||||||||||     
T  12732421 ttcctttttaattgtcacattttaacattttacacaaaacaagacaattaacaattgatactacttttgatgcaataagctatacttttactataatgat 12732322  T
Q  218 cttattcatttaatatctcatt 239  Q
     ||||||||||||||| |||||    
T  12732321 attattcatttaatatttcatt 12732300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 235
Target Start/End: Complemental strand, 52824 - 52792
Alignment:
Q  203 ttttactataatgaccttattcatttaatatct 235  Q
    ||||| |||||||||||||||||||||||||||    
T  52824 ttttattataatgaccttattcatttaatatct 52792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 11676695 - 11676731
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  11676695 ttttactataatgaccttattaatttaatatttcatt 11676731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 17251336 - 17251372
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  17251336 ttttactataatgaccttattaatttaatatttcatt 17251372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 218
Target Start/End: Complemental strand, 24949353 - 24949253
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||| || | |||| |||||||| ||||||||| ||||||| | |||||||| |||| ||  ||| | || || |||||||||||||||    
T  24949353 ttcctttttaattgttattttttgatattttacacaaaccaaaacaatcaataaatgttactacttttgatacaattatttttacttttactataatgac 24949254  T
Q  218 c 218  Q
    |    
T  24949253 c 24949253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 30237139 - 30237103
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||| |||||||| |||||||||||||||    
T  30237139 ttttactataataaccttattaatttaatatctcatt 30237103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 235
Target Start/End: Complemental strand, 30388882 - 30388850
Alignment:
Q  203 ttttactataatgaccttattcatttaatatct 235  Q
    |||||||||||||| ||||||||||||||||||    
T  30388882 ttttactataatgatcttattcatttaatatct 30388850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 31244829 - 31244865
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  31244829 ttttactataatgaccttattaatttaatatttcatt 31244865  T

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Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 32359520 - 32359556
Alignment:
Q  203 ttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||||| |||||||||| |||||||||||    
T  32359520 ttttactataatgatcttattcattaaatatctcatt 32359556  T

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Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 34730785 - 34730689
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatct 235  Q
    |||| |||||| | ||||||| | | ||||||| |||||||| |||| ||  || ||  | ||||||||||||||| |||||||||||| |||||||    
T  34730785 ttgatattttatacaaaccaagacattcaatgaatgttactacttttgatacaacaatgtatatttttactataataaccttattcattcaatatct 34730689  T

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Target: scaffold0886 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 4735 - 4644
Alignment:
Q  144 attttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatct 235  Q
    |||||||||||||||| | ||||||| |||||||||| |||| ||| ||||| || |||||||||||||||||||||||| |||||||||||    
T  4735 attttacataaaccaagacaatcaataattgttactacttttgatgcaataagttatatttttactataatgaccttatttatttaatatct 4644  T

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Target: scaffold0280 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 8400 - 8279
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||| ||||||| | ||||||  |||| ||||| |||| ||| ||||| || || ||||||||||||||     
T  8400 ttcctttttaattgtcacattttgacattttacacaaaccaagacaatcaacaattgatactacttttgatgcaataagttatacttttactataatgat 8301  T
Q  218 cttattcatttaatatctcatt 239  Q
    ||||||||||||||||||||||    
T  8300 cttattcatttaatatctcatt 8279  T

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Target: scaffold0002 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 148549 - 148428
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||| |||| ||||||||||||||||||||| | ||| ||  |||| ||||| |||| || |||||| || || |||||||||||||||    
T  148549 ttcctttttaattgttatattttgacattttacataaaccaagacaataaaaaattgatactacttttgatataataagttatacttttactataatgac 148450  T
Q  218 cttattcatttaatatctcatt 239  Q
    |||||||||||||||| |||||    
T  148449 cttattcatttaatatatcatt 148428  T

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Target: scaffold1213 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1213
Description:

Target: scaffold1213; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 7 - 83
Alignment:
Q  163 aatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    ||||||| ||| |||||| |||| ||| ||||| ||||| |||||||||||||||||||||||||||| ||||||||    
T  7 aatcaataattattactacttttgatgcaataagttgtacttttactataatgaccttattcatttaacatctcatt 83  T

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Target: scaffold0172 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 233
Target Start/End: Original strand, 26134 - 26237
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    |||||||| ||||||||||||||||||||| | ||||||  |||| || || |||| ||| |||||  | || ||||| |||||||||||||||||||||    
T  26134 tgtcatattttgacattttacataaaccaagacaatcaacaattgatattacttttgatgcaataagctatacttttattataatgaccttattcattta 26233  T
Q  230 atat 233  Q
    ||||    
T  26234 atat 26237  T

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Target: scaffold0024 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 231
Target Start/End: Complemental strand, 49392 - 49279
Alignment:
Q  118 ttcctttttatctgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgac 217  Q
    ||||||||||  ||||| || ||||||||||||  ||||||| | ||||||  |||| ||||| |||| ||| |||||| | || ||||| |||||||||    
T  49392 ttcctttttaattgtcacattttgacattttacgcaaaccaagacaatcaacaattgatactacttttgatgcaataaactatacttttattataatgac 49293  T
Q  218 cttattcatttaat 231  Q
    ||||||||||||||    
T  49292 cttattcatttaat 49279  T

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Target: scaffold0007 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 77310 - 77213
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||| ||| ||| | ||||||  |||| ||||| |||| ||| |||||| | || |||||||||||| ||||||||||||||||||||||||    
T  77310 acattttacacaaatcaagacaatcaacaattgatactacttttgatgcaataaactatacttttactataataaccttattcatttaatatctcatt 77213  T

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Target: scaffold0001 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 140 - 239
Target Start/End: Original strand, 419509 - 419608
Alignment:
Q  140 tgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||||||||||||||| | ||||||| | |||||||| |||| ||  ||||| |  || |||||||||||| | |||||| |||||||||||||||    
T  419509 tgacattttacataaaccaagacaatcaataaatgttactacttttgatacaataattgatacttttactataataatcttatttatttaatatctcatt 419608  T

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Target: scaffold0040 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 69333 - 69229
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    ||||| || ||||||||||||| ||||||| | ||||||  ||| | ||||||||| ||| |||||  | || |||||||||||||| ||||||||||||    
T  69333 tgtcacattttgacattttacacaaaccaagacaatcaacaattat-actatttttgatgcaataagctatacttttactataatgaacttattcattta 69235  T
Q  230 atatct 235  Q
    ||||||    
T  69234 atatct 69229  T

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Target: scaffold0014 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 195594 - 195698
Alignment:
Q  130 tgtcatatgttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcattta 229  Q
    ||||| || ||||||||||||| ||||||| |||||| |  |||| |||||| ||| ||  |||||| | || ||||||||||| || ||||||||||||    
T  195594 tgtcacattttgacattttacacaaaccaagataatcgacaattgatactatgtttgatacaataaactatacttttactataacgatcttattcattta 195693  T
Q  230 atatc 234  Q
    |||||    
T  195694 atatc 195698  T

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Target: scaffold0831 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 239
Target Start/End: Complemental strand, 3028 - 2932
Alignment:
Q  144 attttacataaaccaaaataatcaatgatt-gttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatctcatt 239  Q
    |||||||| ||||||| | ||||| | ||| ||||||| |||| ||| ||||| || || ||||| |||||||||||||||||||||| | ||||||    
T  3028 attttacacaaaccaagacaatcagtaatttgttactacttttgatgcaataagttatacttttattataatgaccttattcatttaacaactcatt 2932  T

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Target: scaffold0471 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 1833 - 1929
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatct 235  Q
    ||||||||||||| ||||||| | | ||||| | ||||||| ||| ||||  |||||  | || |||||||||||| |||||| |||||||||||||    
T  1833 ttgacattttacacaaaccaagacactcaataaatgttactttttcttatacaataatctatacttttactataataaccttagtcatttaatatct 1929  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 235
Target Start/End: Original strand, 184146 - 184239
Alignment:
Q  142 acattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatct 235  Q
    |||||||||| ||||||| | | ||||| | ||||||| ||| ||||  ||||| || || ||||||||||||  ||||| |||||||||||||    
T  184146 acattttacacaaaccaagacactcaataaatgttactttttcttatacaataatttatacttttactataatagccttagtcatttaatatct 184239  T

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Target: scaffold0274 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 235
Target Start/End: Original strand, 255 - 351
Alignment:
Q  139 ttgacattttacataaaccaaaataatcaatgattgttactattttttatgtaataaattgtatttttactataatgaccttattcatttaatatct 235  Q
    |||| |||||| | ||||||| | | ||||||| |||||||| |||| ||  || ||  | ||||||||||||||| |||||||||||| |||||||    
T  255 ttgatattttatacaaaccaagacattcaatgaatgttactacttttgatacaacaatgtatatttttactataataaccttattcattcaatatct 351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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