View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8788_high_11 (Length: 230)

Name: NF8788_high_11
Description: NF8788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8788_high_11
NF8788_high_11
[»] chr7 (46 HSPs)
chr7 (64-230)||(4501198-4501363)
chr7 (67-227)||(19277235-19277395)
chr7 (64-227)||(982891-983054)
chr7 (64-227)||(21326840-21327003)
chr7 (70-224)||(24527534-24527688)
chr7 (64-230)||(27521410-27521576)
chr7 (89-230)||(48539120-48539261)
chr7 (64-230)||(32584539-32584706)
chr7 (72-230)||(43856813-43856971)
chr7 (68-230)||(22197926-22198087)
chr7 (68-230)||(22239734-22239895)
chr7 (84-230)||(45613864-45614010)
chr7 (64-230)||(10905057-10905222)
chr7 (69-227)||(30216065-30216223)
chr7 (64-229)||(40726482-40726647)
chr7 (65-230)||(42295187-42295352)
chr7 (69-230)||(5825212-5825373)
chr7 (71-227)||(25186945-25187096)
chr7 (64-230)||(28517289-28517455)
chr7 (107-230)||(5972261-5972384)
chr7 (92-230)||(36558898-36559035)
chr7 (69-178)||(9281138-9281247)
chr7 (69-178)||(9292109-9292218)
chr7 (129-227)||(41117837-41117935)
chr7 (92-229)||(6634993-6635130)
chr7 (67-230)||(34772721-34772883)
chr7 (69-166)||(2904368-2904465)
chr7 (74-230)||(23792951-23793107)
chr7 (74-172)||(47679122-47679220)
chr7 (2-66)||(4501544-4501608)
chr7 (84-190)||(10032193-10032299)
chr7 (146-230)||(23037484-23037568)
chr7 (153-227)||(44525927-44526001)
chr7 (1-53)||(45613598-45613650)
chr7 (64-127)||(3676681-3676744)
chr7 (184-230)||(45003019-45003065)
chr7 (70-111)||(26770455-26770496)
chr7 (1-66)||(47679411-47679476)
chr7 (4-60)||(24527882-24527938)
chr7 (194-230)||(45974731-45974767)
chr7 (71-125)||(4879547-4879601)
chr7 (190-227)||(27027758-27027795)
chr7 (1-66)||(28517043-28517108)
chr7 (69-174)||(47251789-47251893)
chr7 (7-59)||(3676933-3676985)
chr7 (2-58)||(10905397-10905453)
[»] chr3 (40 HSPs)
chr3 (64-230)||(53785648-53785814)
chr3 (64-230)||(39583231-39583397)
chr3 (68-205)||(52741518-52741655)
chr3 (64-228)||(44198708-44198872)
chr3 (64-227)||(32546737-32546900)
chr3 (70-229)||(37133007-37133166)
chr3 (64-230)||(26772697-26772863)
chr3 (69-225)||(26856769-26856925)
chr3 (65-229)||(54508386-54508551)
chr3 (69-226)||(38670887-38671044)
chr3 (72-230)||(38978809-38978967)
chr3 (65-230)||(3443315-3443480)
chr3 (74-230)||(52411903-52412059)
chr3 (71-230)||(7900797-7900956)
chr3 (90-230)||(5338585-5338722)
chr3 (76-230)||(38145995-38146149)
chr3 (64-230)||(7502013-7502178)
chr3 (69-205)||(51234580-51234716)
chr3 (64-230)||(46940772-46940941)
chr3 (69-230)||(13582449-13582609)
chr3 (68-229)||(49017907-49018064)
chr3 (70-230)||(21552603-21552766)
chr3 (68-228)||(37992274-37992433)
chr3 (145-224)||(44781-44860)
chr3 (70-230)||(4473001-4473160)
chr3 (70-199)||(25324999-25325130)
chr3 (157-230)||(4763888-4763960)
chr3 (1-59)||(29862090-29862148)
chr3 (70-169)||(3376748-3376848)
chr3 (1-66)||(53785995-53786060)
chr3 (158-230)||(464977-465049)
chr3 (155-227)||(25094665-25094737)
chr3 (85-229)||(43123085-43123229)
chr3 (1-60)||(39582985-39583044)
chr3 (1-60)||(52741267-52741326)
chr3 (1-66)||(35236414-35236479)
chr3 (151-195)||(4669086-4669130)
chr3 (69-127)||(13772491-13772549)
chr3 (171-228)||(3643092-3643149)
chr3 (1-53)||(49018262-49018314)
[»] chr2 (37 HSPs)
chr2 (64-227)||(4413068-4413231)
chr2 (64-230)||(17344577-17344743)
chr2 (64-230)||(41867910-41868076)
chr2 (64-229)||(18744956-18745121)
chr2 (64-227)||(9685417-9685580)
chr2 (64-228)||(19161785-19161949)
chr2 (63-230)||(44686355-44686526)
chr2 (68-229)||(28224940-28225101)
chr2 (113-229)||(13413291-13413407)
chr2 (69-211)||(34814826-34814967)
chr2 (90-211)||(20142753-20142874)
chr2 (64-230)||(5532360-5532524)
chr2 (84-229)||(2886637-2886781)
chr2 (64-230)||(16351843-16352012)
chr2 (64-230)||(7760848-7761013)
chr2 (64-230)||(23484940-23485104)
chr2 (84-230)||(32029108-32029254)
chr2 (64-205)||(2888480-2888621)
chr2 (64-230)||(27502301-27502467)
chr2 (89-229)||(3825666-3825806)
chr2 (64-230)||(13147099-13147268)
chr2 (70-228)||(33612555-33612711)
chr2 (70-178)||(11921218-11921326)
chr2 (1-59)||(4412822-4412880)
chr2 (65-230)||(44720261-44720427)
chr2 (1-66)||(17344924-17344989)
chr2 (1-60)||(20142496-20142555)
chr2 (68-174)||(29808070-29808175)
chr2 (159-229)||(44684955-44685025)
chr2 (64-197)||(3968411-3968544)
chr2 (146-211)||(8036566-8036633)
chr2 (1-59)||(41867664-41867722)
chr2 (8-58)||(44686712-44686762)
chr2 (65-111)||(1296053-1296099)
chr2 (1-59)||(9685171-9685229)
chr2 (1-66)||(27502647-27502712)
chr2 (1-53)||(18744710-18744762)
[»] chr8 (44 HSPs)
chr8 (64-230)||(38815233-38815399)
chr8 (65-230)||(24124967-24125132)
chr8 (64-230)||(6592515-6592680)
chr8 (64-198)||(500199-500332)
chr8 (64-230)||(3187909-3188074)
chr8 (64-212)||(35739988-35740136)
chr8 (70-230)||(6618224-6618383)
chr8 (64-230)||(39434606-39434772)
chr8 (74-230)||(25021826-25021982)
chr8 (92-224)||(37514166-37514298)
chr8 (120-227)||(22589395-22589501)
chr8 (139-230)||(3821163-3821254)
chr8 (64-178)||(8882319-8882432)
chr8 (70-230)||(28196131-28196291)
chr8 (64-230)||(4073473-4073640)
chr8 (69-178)||(8619805-8619914)
chr8 (139-214)||(18804567-18804642)
chr8 (64-222)||(39671173-39671332)
chr8 (64-202)||(8115779-8115916)
chr8 (99-200)||(3863286-3863387)
chr8 (139-200)||(40223480-40223541)
chr8 (105-230)||(43823928-43824053)
chr8 (99-230)||(3825574-3825705)
chr8 (147-230)||(9259377-9259460)
chr8 (64-230)||(4699810-4699973)
chr8 (69-230)||(8540384-8540548)
chr8 (69-131)||(10189581-10189643)
chr8 (87-187)||(6120947-6121045)
chr8 (90-222)||(36004069-36004201)
chr8 (1-66)||(37517375-37517440)
chr8 (1-66)||(39434953-39435018)
chr8 (1-53)||(500526-500578)
chr8 (75-127)||(42922140-42922192)
chr8 (184-227)||(24451062-24451105)
chr8 (146-230)||(121805-121889)
chr8 (1-60)||(24125320-24125379)
chr8 (64-226)||(10556295-10556456)
chr8 (96-178)||(27715339-27715421)
chr8 (184-230)||(42659166-42659212)
chr8 (92-169)||(4097373-4097450)
chr8 (140-229)||(5329680-5329769)
chr8 (78-179)||(43421302-43421403)
chr8 (76-132)||(10950673-10950729)
chr8 (76-132)||(10958678-10958734)
[»] scaffold0490 (1 HSPs)
scaffold0490 (64-224)||(6279-6439)
[»] chr1 (31 HSPs)
chr1 (64-227)||(22346837-22347000)
chr1 (65-223)||(21472949-21473107)
chr1 (64-205)||(29169795-29169936)
chr1 (64-225)||(28041129-28041290)
chr1 (74-229)||(20259809-20259964)
chr1 (64-230)||(45659650-45659814)
chr1 (64-230)||(34644505-34644671)
chr1 (64-229)||(2898642-2898810)
chr1 (64-219)||(31737325-31737480)
chr1 (64-230)||(2764418-2764584)
chr1 (91-227)||(24177540-24177676)
chr1 (69-230)||(4861996-4862157)
chr1 (74-230)||(38731548-38731704)
chr1 (64-151)||(19035465-19035552)
chr1 (64-178)||(50314626-50314740)
chr1 (66-197)||(42919832-42919962)
chr1 (71-230)||(18616162-18616321)
chr1 (98-230)||(47459621-47459753)
chr1 (85-227)||(7213192-7213335)
chr1 (64-229)||(50161419-50161591)
chr1 (84-211)||(37932239-37932366)
chr1 (64-169)||(16500034-16500139)
chr1 (69-131)||(15584912-15584974)
chr1 (64-138)||(36486917-36486991)
chr1 (2-66)||(34644852-34644916)
chr1 (153-205)||(35387747-35387799)
chr1 (172-219)||(868513-868560)
chr1 (1-60)||(28040883-28040942)
chr1 (4-66)||(29169553-29169615)
chr1 (87-229)||(35550100-35550242)
chr1 (64-117)||(23043929-23043982)
[»] scaffold0148 (1 HSPs)
scaffold0148 (64-230)||(33189-33355)
[»] chr6 (28 HSPs)
chr6 (64-230)||(959520-959685)
chr6 (64-230)||(4206598-4206764)
chr6 (64-203)||(4165924-4166063)
chr6 (69-204)||(45684-45819)
chr6 (64-230)||(17249307-17249473)
chr6 (68-230)||(34304435-34304597)
chr6 (64-230)||(33220713-33220879)
chr6 (67-230)||(29338084-29338247)
chr6 (64-230)||(28625870-28626036)
chr6 (64-230)||(357719-357884)
chr6 (68-230)||(34554283-34554444)
chr6 (65-201)||(34415404-34415540)
chr6 (69-230)||(24016276-24016437)
chr6 (153-230)||(32115657-32115734)
chr6 (70-228)||(3714858-3715016)
chr6 (1-66)||(32115975-32116040)
chr6 (80-188)||(26225597-26225705)
chr6 (1-66)||(357473-357538)
chr6 (85-230)||(13398205-13398350)
chr6 (182-230)||(3137367-3137415)
chr6 (154-225)||(31703561-31703632)
chr6 (64-124)||(34168913-34168973)
chr6 (75-217)||(22985873-22986015)
chr6 (75-217)||(23802379-23802521)
chr6 (1-60)||(45425-45484)
chr6 (1-59)||(4206352-4206410)
chr6 (64-164)||(6225077-6225177)
chr6 (64-132)||(28543412-28543480)
[»] scaffold0009 (1 HSPs)
scaffold0009 (65-230)||(103045-103209)
[»] chr5 (43 HSPs)
chr5 (64-230)||(32269799-32269965)
chr5 (64-230)||(42921637-42921802)
chr5 (64-229)||(37873640-37873805)
chr5 (64-230)||(13166912-13167078)
chr5 (64-229)||(15292028-15292192)
chr5 (64-230)||(33692057-33692222)
chr5 (64-230)||(35310387-35310553)
chr5 (94-230)||(22188687-22188823)
chr5 (64-230)||(25663034-25663200)
chr5 (68-230)||(38875578-38875739)
chr5 (64-178)||(43129525-43129639)
chr5 (66-230)||(34335276-34335440)
chr5 (85-230)||(430541-430686)
chr5 (64-224)||(26212585-26212745)
chr5 (64-230)||(27336634-27336798)
chr5 (71-211)||(14423643-14423776)
chr5 (87-200)||(14723269-14723382)
chr5 (69-204)||(8100517-8100652)
chr5 (69-162)||(35455963-35456056)
chr5 (97-204)||(41343473-41343581)
chr5 (161-230)||(2566194-2566263)
chr5 (69-188)||(43115464-43115583)
chr5 (75-230)||(19260243-19260396)
chr5 (68-142)||(32230513-32230587)
chr5 (64-137)||(3114165-3114238)
chr5 (1-66)||(38446452-38446517)
chr5 (90-204)||(7716146-7716261)
chr5 (69-116)||(8858969-8859016)
chr5 (64-127)||(14436542-14436602)
chr5 (173-230)||(23023534-23023591)
chr5 (75-178)||(27294429-27294528)
chr5 (1-61)||(433583-433643)
chr5 (70-118)||(7143757-7143805)
chr5 (147-227)||(15809991-15810069)
chr5 (90-227)||(15833004-15833138)
chr5 (151-202)||(23423960-23424011)
chr5 (1-59)||(3113921-3113979)
chr5 (71-117)||(9829361-9829407)
chr5 (4-66)||(13166669-13166731)
chr5 (1-66)||(6534319-6534384)
chr5 (173-230)||(24113514-24113571)
chr5 (1-66)||(26212339-26212403)
chr5 (136-180)||(8087547-8087591)
[»] chr4 (49 HSPs)
chr4 (68-230)||(600698-600860)
chr4 (69-230)||(56462113-56462274)
chr4 (69-229)||(25504235-25504395)
chr4 (67-227)||(53170454-53170609)
chr4 (64-227)||(34107696-34107861)
chr4 (64-230)||(53619525-53619691)
chr4 (65-230)||(132324-132489)
chr4 (64-230)||(26521428-26521593)
chr4 (83-230)||(7536592-7536739)
chr4 (64-230)||(50000927-50001094)
chr4 (70-227)||(6865828-6865984)
chr4 (77-186)||(50483211-50483320)
chr4 (88-230)||(3329935-3330077)
chr4 (64-227)||(30940741-30940897)
chr4 (139-230)||(16955399-16955490)
chr4 (64-230)||(55933464-55933628)
chr4 (100-230)||(38535607-38535737)
chr4 (84-218)||(46440911-46441045)
chr4 (146-230)||(4419202-4419286)
chr4 (63-230)||(54190857-54191019)
chr4 (84-174)||(11562893-11562983)
chr4 (64-230)||(23255652-23255809)
chr4 (63-197)||(43849349-43849483)
chr4 (70-230)||(46391323-46391480)
chr4 (69-230)||(48656917-48657083)
chr4 (68-205)||(50462952-50463089)
chr4 (87-187)||(53098403-53098503)
chr4 (105-191)||(747812-747898)
chr4 (64-178)||(31847078-31847192)
chr4 (64-173)||(12918374-12918483)
chr4 (118-230)||(39001336-39001448)
chr4 (68-143)||(16957568-16957643)
chr4 (147-230)||(42455692-42455775)
chr4 (105-191)||(712636-712722)
chr4 (1-66)||(26521774-26521839)
chr4 (171-226)||(8738148-8738203)
chr4 (64-229)||(28739845-28740011)
chr4 (64-219)||(45386063-45386218)
chr4 (1-59)||(3330243-3330301)
chr4 (69-131)||(45760841-45760903)
chr4 (69-122)||(12053460-12053513)
chr4 (153-230)||(50464387-50464464)
chr4 (2-66)||(16957822-16957886)
chr4 (182-230)||(18981659-18981706)
chr4 (79-127)||(24719976-24720024)
chr4 (69-117)||(28883158-28883206)
chr4 (152-230)||(34213559-34213636)
chr4 (1-66)||(34952457-34952522)
chr4 (147-227)||(32312796-32312876)
[»] scaffold0470 (1 HSPs)
scaffold0470 (70-230)||(7542-7701)
[»] scaffold1768 (1 HSPs)
scaffold1768 (64-230)||(186-352)
[»] scaffold0186 (1 HSPs)
scaffold0186 (65-201)||(10329-10468)
[»] scaffold0224 (1 HSPs)
scaffold0224 (66-197)||(18369-18499)
[»] scaffold0031 (1 HSPs)
scaffold0031 (75-230)||(49354-49505)
[»] scaffold0493 (1 HSPs)
scaffold0493 (71-178)||(8525-8632)
[»] scaffold0110 (1 HSPs)
scaffold0110 (65-133)||(47542-47610)
[»] scaffold0119 (2 HSPs)
scaffold0119 (65-111)||(16192-16238)
scaffold0119 (120-202)||(16073-16154)


Alignment Details
Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 4501363 - 4501198
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  4501363 gtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttatataatttgcttttgacacttt-ggttttctagcaccagaggttgttgaccttc 4501265  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  4501264 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcctagattcatgaatgttgtgtttac 4501198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 67 - 227
Target Start/End: Complemental strand, 19277395 - 19277235
Alignment:
Q  67 gccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctac 166  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||    
T  19277395 gccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcggtttcctagcaccagaggttgttgaccttctac 19277296  T
Q  167 atagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 227  Q
    |||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||    
T  19277295 atagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtt 19277235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 64 - 227
Target Start/End: Complemental strand, 983054 - 982891
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||| |||||||||||||| |||||    
T  983054 gtggccaaacatgagaaatcgtgttctgacaatcaacatgcttttataccatttgcttttgatactttcggttttctagcaccagaggttgttggccttc 982955  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 227  Q
    ||||||||||||||||| ||||||||| |||||||||||||  || || |||||||||||||||    
T  982954 tacatagagttcaaaaggtcatgcatatcaatgtcatgtcttctatgtccatgaatgttgtgtt 982891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 64 - 227
Target Start/End: Original strand, 21326840 - 21327003
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||| |||| |||||||| ||||||||||     
T  21326840 gtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcgatttcctagcaccagaggctgttgaccttt 21326939  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 227  Q
    ||||||||||||||||| |||||||||||||||| ||||||| ||||| |||||||||||||||    
T  21326940 tacatagagttcaaaaggtcatgcatagcaatgttatgtctcctaggtccatgaatgttgtgtt 21327003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 70 - 224
Target Start/End: Complemental strand, 24527688 - 24527534
Alignment:
Q  70 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 169  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||| |||| || |||||  ||||||||||||||||    
T  24527688 aaacatgagaaaacgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcagtttcctagcacgagaggcggttgaccttctacata 24527589  T
Q  170 gagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgt 224  Q
    ||||||||||| ||||||||||||||||||| |||| | ||| ||||||||||||    
T  24527588 gagttcaaaaggtcatgcatagcaatgtcatttctccttggtccatgaatgttgt 24527534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 27521576 - 27521410
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||  |||| ||||||||| ||| ||||| |||| | ||||||||||||||||||    
T  27521576 gtggtcaaacatgagaaaacgtgttctgacaatcaacatgcatttatacaatttacttttgacacttttggtttcctagcatcagaggttgttgaccttc 27521477  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||||||||||| ||||||||| |||||||||||||| || ||  |||||||||||||||||    
T  27521476 tacatagagttcaaaaggtcatgcataacaatgtcatgtctcctaagtctatgaatgttgtgtttac 27521410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 89 - 230
Target Start/End: Complemental strand, 48539261 - 48539120
Alignment:
Q  89 ctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgca 188  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||| |||||| | |||||||||||| |||||| |||||||    
T  48539261 ctgacaatcaacatgcttttataccatttgcttttgacactttcggttttctagcaccagaggctgttgatcgtctacatagagtccaaaaggtcatgca 48539162  T
Q  189 tagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||||||||||| ||||| ||||||||||||||||||    
T  48539161 tagcaatgtcatgtctcctaggtccatgaatgttgtgtttac 48539120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 32584706 - 32584539
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||| |||  |||| |||| ||||||||||||||||||||    
T  32584706 gtggtcaaacatgagaaaacgtgttctgacaatcaagatgcttttacaccatttgcttttgacactttatgtttcctagcaccagaggttgttgaccttc 32584607  T
Q  164 tacatagagtt-caaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    || |||||||| |||||| ||||||||| |||||| ||||||||||| |  |||||||||||||||||    
T  32584606 tagatagagttccaaaagatcatgcatatcaatgttatgtctcatagatcgatgaatgttgtgtttac 32584539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 72 - 230
Target Start/End: Complemental strand, 43856971 - 43856813
Alignment:
Q  72 acatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacataga 171  Q
    |||||||||| |||||| ||||||||||||||| ||||||  |||||||||||||||||| ||||| |||  ||||||||||||||||||||||||||||    
T  43856971 acatgagaaagcgtgttttgacaatcaacatgcgtttatacaatttgcttttgacatttttggtttcctaacaccagaggttgttgaccttctacataga 43856872  T
Q  172 gttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||| | ||||||| | |||||||||| ||| ||||| |||||||||| |||||||    
T  43856871 gttcaaagggtcatgcacaacaatgtcatgactcctaggtccatgaatgttatgtttac 43856813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 68 - 230
Target Start/End: Complemental strand, 22198087 - 22197926
Alignment:
Q  68 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 167  Q
    ||||||||||||||  ||||||  |||||||||||| ||||||| |||||||||||| || ||||||||| |||| | ||||||||||||||||||||||    
T  22198087 ccaaacatgagaaagtgtgttccaacaatcaacatgtttttataccatttgcttttgtcactttcggtttcctagcatcagaggttgttgaccttctaca 22197988  T
Q  168 tagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||||||| | ||| ||||||| |||||||||| |||||  |||||||||||||||||    
T  22197987 tagagttcaaaaggttatg-atagcaacgtcatgtctcctaggtcaatgaatgttgtgtttac 22197926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 68 - 230
Target Start/End: Original strand, 22239734 - 22239895
Alignment:
Q  68 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 167  Q
    ||||||||||||||  ||||||  |||||||||||| ||||||| |||||||||||| || ||||||||| |||| | ||||||||||||||||||||||    
T  22239734 ccaaacatgagaaagtgtgttccaacaatcaacatgtttttataccatttgcttttgtcactttcggtttcctagcatcagaggttgttgaccttctaca 22239833  T
Q  168 tagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||||||| | ||| ||||||| |||||||||| |||||  |||||||||||||||||    
T  22239834 tagagttcaaaaggttatg-atagcaacgtcatgtctcctaggtcaatgaatgttgtgtttac 22239895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 84 - 230
Target Start/End: Original strand, 45613864 - 45614010
Alignment:
Q  84 gtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttc 183  Q
    |||||||||||||||||||| ||||||| |||||| |||||||| ||||||||| | || |||||||| ||||  |||||||||||||||||||||||||    
T  45613864 gtgttctgacaatcaacatgtttttataccatttgattttgacactttcggtttccaagcaccagaggctgttagccttctacatagagttcaaaagttc 45613963  T
Q  184 atgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||| ||||||||  |||| ||||| ||||||||||||||||||    
T  45613964 atgcataacaatgtcaaatctcctaggtccatgaatgttgtgtttac 45614010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 10905222 - 10905057
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    ||||||||| ||||||||| ||||||||||| |||||||||||| ||| ||||||||||||||| ||| ||||  |||| |||||||  |||||||||||    
T  10905222 gtggccaaatatgagaaaaagtgttctgacactcaacatgcttt-ataccatttgcttttgacacttttggttgcctagcaccagagtatgttgaccttc 10905124  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||||||||    |||||||| |||||||||||||| ||||| ||||||||| ||||||||    
T  10905123 tacatagagttcaaagagccatgcataacaatgtcatgtctcctaggtccatgaatgtcgtgtttac 10905057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 69 - 227
Target Start/End: Original strand, 30216065 - 30216223
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 168  Q
    |||| |||||||| |||||| |||||||||||||| ||||||| ||||||||||||||| ||||||||| |||| | ||||| ||||||| |||| ||||    
T  30216065 caaatatgagaaagcgtgttttgacaatcaacatgtttttataccatttgcttttgacactttcggtttcctagcatcagagtttgttgatcttccacat 30216164  T
Q  169 agagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 227  Q
    | |||||||| | ||||||||||||||||||| |||| |||||  ||||||||||||||    
T  30216165 aaagttcaaatggtcatgcatagcaatgtcatatctcctaggtctatgaatgttgtgtt 30216223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 64 - 229
Target Start/End: Original strand, 40726482 - 40726647
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||| | |||| |||||||||||||||||||| ||||||| |||||| |||||||| |||||| ||  ||| | ||||||||||||||||||    
T  40726482 gtggccaaacataataaaatgtgttctgacaatcaacatgtttttataccatttgtttttgacactttcggcttcatagcatcagaggttgttgaccttc 40726581  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttta 229  Q
    |||||||||| |||| | | ||||||| |||||  ||||||| ||| | |||||||||||||||||    
T  40726582 tacatagagtccaaagggttatgcataacaatgctatgtctcctagatccatgaatgttgtgttta 40726647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 65 - 230
Target Start/End: Original strand, 42295187 - 42295352
Alignment:
Q  65 tggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttct 164  Q
    ||||||||||| ||||| | | ||||||||||||||||| ||||||| |||||| |||| | | ||||||||| |||  ||||| |||||||||||||||    
T  42295187 tggccaaacataagaaagcttcttctgacaatcaacatgtttttataccatttgttttttatactttcggtttcctaacaccaggggttgttgaccttct 42295286  T
Q  165 acatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||| ||||||||  ||||||||| || ||||||||||| ||||| ||||||| ||||||||||    
T  42295287 acatagcgttcaaaatatcatgcataacattgtcatgtctcctaggtccatgaatcttgtgtttac 42295352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 69 - 230
Target Start/End: Complemental strand, 5825373 - 5825212
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 168  Q
    ||||||||| ||  |||||| |||||||||||||| ||||||| ||||| ||||||||| ||||||  | |||| |||||||||||||||||||||||||    
T  5825373 caaacatgacaatgcgtgttatgacaatcaacatgtttttataccatttacttttgacactttcggcatcctagcaccagaggttgttgaccttctacat 5825274  T
Q  169 agagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||  ||| | | |||||||||||||| ||||||| |||||  ||| |||||||||||||    
T  5825273 agagtcgaaagggttatgcatagcaatgttatgtctcctaggtctatggatgttgtgtttac 5825212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 71 - 227
Target Start/End: Original strand, 25186945 - 25187096
Alignment:
Q  71 aacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatag 170  Q
    ||||||||||| ||||||| || |||||||||| |||| || |||||||||||||     ||||||| | |  || ||||||||||||||||||| ||||    
T  25186945 aacatgagaaagcgtgttccgataatcaacatgtttttctaccatttgcttttga-----tcggtttccgaacactagaggttgttgaccttctatatag 25187039  T
Q  171 agttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 227  Q
    |||||||||| |||||||||||||||||||||||| ||| | |||||||||||||||    
T  25187040 agttcaaaaggtcatgcatagcaatgtcatgtctcctagatccatgaatgttgtgtt 25187096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 230
Target Start/End: Original strand, 28517289 - 28517455
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||| ||||||  ||||||||||||| ||||||| ||||||||||||||| ||| |  || |||| | |||||   ||||||||||    
T  28517289 gtggccaaacatgagaaagcgtgtttagacaatcaacatgtttttataccatttgcttttgacacttttgacttcctagcatcagagacagttgaccttc 28517388  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||| |||| | | ||||||| |||||| ||||||| || || ||||||||||||||||||    
T  28517389 tacatagagtccaaagggttatgcataacaatgttatgtctcctaagtccatgaatgttgtgtttac 28517455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 5972261 - 5972384
Alignment:
Q  107 ttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctca 206  Q
    ||||| |||||| |||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||  |||||||||| |||||||| ||||     
T  5972261 ttataccatttgtttttgacattttcatttttctagtatcagaggttgttgaccttctacatagagttcaaaatgtcatgcatagtaatgtcatttctcc 5972360  T
Q  207 taggttcatgaatgttgtgtttac 230  Q
     || |  |||||||||||||||||    
T  5972361 cagatctatgaatgttgtgtttac 5972384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 92 - 230
Target Start/End: Original strand, 36558898 - 36559035
Alignment:
Q  92 acaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatag 191  Q
    |||||||||||| |||||||| |||||| ||||||||||| |||||||||| |||| | || |||||| |||| ||||||||| ||| | |||||||||     
T  36558898 acaatcaacatgtttttatataatttgcatttgacatttttggttttctagcaccaaaagtcgttgactttctccatagagtt-aaatggtcatgcatat 36558996  T
Q  192 caatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
     ||| |||||||| |||||| ||||||||||||||||||    
T  36558997 aaatatcatgtcttataggtccatgaatgttgtgtttac 36559035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 69 - 178
Target Start/End: Original strand, 9281138 - 9281247
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 168  Q
    ||||||||||||| |||||||| ||||||||||||||||||||  |||||  |||||||||||  | || |||| |||||| ||||||||||||||||||    
T  9281138 caaacatgagaaagcgtgttctaacaatcaacatgcttttatactatttggatttgacattttttgcttcctagcaccagatgttgttgaccttctacat 9281237  T
Q  169 agagttcaaa 178  Q
    ||||||||||    
T  9281238 agagttcaaa 9281247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 69 - 178
Target Start/End: Original strand, 9292109 - 9292218
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 168  Q
    ||||||||||||| |||||||| ||||||||||||||||||||  |||||  |||||||||||  | || |||| |||||| ||||||||||||||||||    
T  9292109 caaacatgagaaagcgtgttctaacaatcaacatgcttttatactatttggatttgacattttttgcttcctagcaccagatgttgttgaccttctacat 9292208  T
Q  169 agagttcaaa 178  Q
    ||||||||||    
T  9292209 agagttcaaa 9292218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 41117837 - 41117935
Alignment:
Q  129 tttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 227  Q
    ||||||||| |||  |||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||||| || ||||| |||||||||||||||    
T  41117837 tttcggtttcctaacaccagatgttgttaaccttctacatagagtttaaaagatcatgcatagcaatgtcatgtttcctaggtccatgaatgttgtgtt 41117935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 229
Target Start/End: Original strand, 6634993 - 6635130
Alignment:
Q  92 acaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatag 191  Q
    |||||||||||  ||||||||||||||||||||||| ||||| |||| ||| | ||||||||||||||||||||| || | || |||   || ||||||     
T  6634993 acaatcaacatatttttatatcatttgcttttgacagtttcgattttttagcatcagaggttgttgaccttctacgtaaaattaaaataatcttgcataa 6635092  T
Q  192 caatgtcatgtctcataggttcatgaatgttgtgttta 229  Q
    |||||||||||||| ||| | ||| |||||||||||||    
T  6635093 caatgtcatgtctcctagatccataaatgttgtgttta 6635130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 67 - 230
Target Start/End: Complemental strand, 34772883 - 34772721
Alignment:
Q  67 gccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctac 166  Q
    |||||| ||||||||  |||||| |||||| || ||| ||||||| ||||||||||||| | ||||  |||  ||| |  ||||||||||||||||||||    
T  34772883 gccaaatatgagaaagtgtgttcggacaattaatatgtttttataccatttgcttttgaaactttcaatttcttag-attagaggttgttgaccttctac 34772785  T
Q  167 atagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||| | |||||||  ||||||||| ||||||||||| |  ||||| ||||||| ||||||||||    
T  34772784 ataaacttcaaaaagtcatgcatatcaatgtcatgttttctaggtccatgaatattgtgtttac 34772721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 2904465 - 2904368
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctac 166  Q
    ||||||||||||| | ||||| ||||||||||||| |||||||||||||| || |||||| || || || |||| || ||||||||||||||||||||    
T  2904465 caaacatgagaaagcatgttccgacaatcaacatgattttatatcatttgtttgtgacatgtttggcttcctagcactagaggttgttgaccttctac 2904368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 230
Target Start/End: Complemental strand, 23793107 - 23792951
Alignment:
Q  74 atgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagt 173  Q
    |||||||||  |||| ||||||||||||||||| ||||||| ||   ||||||| ||| | |||  ||| |||| ||||||||||||||||| ||| |||    
T  23793107 atgagaaaatatgttttgacaatcaacatgcttctatatcaattatgtttgacacttttgttttcttagcaccacaggttgttgaccttctaaatacagt 23793008  T
Q  174 tcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||| | |||| ||||| ||||| ||||||| |||||  || ||| ||||||||||    
T  23793007 tcaaaggatcatacatagtaatgtaatgtctcctaggtctataaatcttgtgtttac 23792951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 74 - 172
Target Start/End: Complemental strand, 47679220 - 47679122
Alignment:
Q  74 atgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagag 172  Q
    ||||||||  ||||||| |||||||| || ||||||||  |||||| ||||||||||||||||| |||| | || ||||||||||||||||| ||||||    
T  47679220 atgagaaagtgtgttctcacaatcaatatacttttatactatttgcgtttgacattttcggtttcctagcatcacaggttgttgaccttctaaatagag 47679122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 4501608 - 4501544
Alignment:
Q  2 ttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcgcttgtg 66  Q
    ||||||||||||||||||||||||| | | |||||||||||||| |||||||||||| |||||||    
T  4501608 ttagggatgtactttttgatatattcagataggcgggagtatcaatgaagaaagaggtgcttgtg 4501544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 190
Target Start/End: Original strand, 10032193 - 10032299
Alignment:
Q  84 gtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttc 183  Q
    |||||||||||||||| ||| |||||||  |||||||||||| |||||| | ||  ||| |  ||| |||||| ||||||||||||||||||||| | ||    
T  10032193 gtgttctgacaatcaatatgtttttatactatttgcttttgatattttcagcttcttagcattagatgttgttaaccttctacatagagttcaaaggatc 10032292  T
Q  184 atgcata 190  Q
    |||||||    
T  10032293 atgcata 10032299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 23037568 - 23037484
Alignment:
Q  146 cagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||||||||| ||||| ||| ||||||| | | ||||||||||||||||| |||| |||||  |||||| ||||||||||    
T  23037568 cagaggttgttgaccatctacgtagggttcaaagggttatgcatagcaatgtcatttctcttaggtctatgaattttgtgtttac 23037484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 153 - 227
Target Start/End: Complemental strand, 44526001 - 44525927
Alignment:
Q  153 tgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 227  Q
    |||||||||||||||| |||||||||||   ||||||| |||||||||||||| ||  | |||||||||||||||    
T  44526001 tgttgaccttctacatggagttcaaaagaatatgcataacaatgtcatgtctcctatatccatgaatgttgtgtt 44525927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 45613598 - 45613650
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaa 53  Q
    |||||||||||||||||||||||||| | || ||| |||||||||||||||||    
T  45613598 gttagggatgtactttttgatatattcagacgggcaggagtatcagtgaagaa 45613650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 3676744 - 3676681
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgaca 127  Q
    |||| ||||||| ||||| |||||||| || ||||| ||||||||||| |||||||||||||||    
T  3676744 gtggtcaaacatcagaaagcgtgttcttactatcaatatgcttttataccatttgcttttgaca 3676681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 45003019 - 45003065
Alignment:
Q  184 atgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||||||| ||||||||||||  ||||||||||||||||||    
T  45003019 atgcatagcaatgttatgtctcataggaccatgaatgttgtgtttac 45003065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 111
Target Start/End: Complemental strand, 26770496 - 26770455
Alignment:
Q  70 aaacatgagaaaacgtgttctgacaatcaacatgcttttata 111  Q
    |||||||||||||||||||||||||||| | |||||||||||    
T  26770496 aaacatgagaaaacgtgttctgacaatctatatgcttttata 26770455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 47679476 - 47679411
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcgcttgtg 66  Q
    |||||||||||||||||||||||||| |  | |||||| |||||||||||||| ||| ||| ||||    
T  47679476 gttagggatgtactttttgatatattcaggcgggcgggggtatcagtgaagaaggagtcgcgtgtg 47679411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 24527938 - 24527882
Alignment:
Q  4 agggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcg 60  Q
    ||||||||||||||||||||||| | || ||| ||| ||||||||||||| ||||||    
T  24527938 agggatgtactttttgatatattcagactggcaggaatatcagtgaagaaggaggcg 24527882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 230
Target Start/End: Original strand, 45974731 - 45974767
Alignment:
Q  194 atgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||||| ||||||||||||||||||||||||    
T  45974731 atgtcatgtctcctaggttcatgaatgttgtgtttac 45974767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 125
Target Start/End: Original strand, 4879547 - 4879601
Alignment:
Q  71 aacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttga 125  Q
    |||||||||||||||||||| |||||||| ||  |||||| |||||||| |||||    
T  4879547 aacatgagaaaacgtgttctaacaatcaaaatatttttatgtcatttgcgtttga 4879601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 27027758 - 27027795
Alignment:
Q  190 agcaatgtcatgtctcataggttcatgaatgttgtgtt 227  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  27027758 agcaatgtcatgtctcctaggtccatgaatgttgtgtt 27027795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 28517043 - 28517108
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcgcttgtg 66  Q
    |||||||||||||||||||||||||| |  |  ||||||| ||| |||||||| ||||||| ||||    
T  28517043 gttagggatgtactttttgatatattcaggcgagcgggagcatcggtgaagaaggaggcgcctgtg 28517108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 174
Target Start/End: Original strand, 47251789 - 47251893
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 168  Q
    |||| |||||||||| |||||| ||||||  ||||||||||||  ||||| ||||||||||||||  || |||| | |||||   |||||| || |||||    
T  47251789 caaatatgagaaaacatgttctcacaatcctcatgcttttata-aatttgtttttgacattttcgacttcctagcatcagagacggttgacattttacat 47251887  T
Q  169 agagtt 174  Q
    ||||||    
T  47251888 agagtt 47251893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 3676985 - 3676933
Alignment:
Q  7 gatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggc 59  Q
    |||||||||||||||||||| | || ||||||| ||||| ||||||| |||||    
T  3676985 gatgtactttttgatatattcagacgggcgggaatatcaatgaagaaggaggc 3676933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 10905453 - 10905397
Alignment:
Q  2 ttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagagg 58  Q
    ||||| ||||||||||||||||||  |   |||||||||||||||||||||| ||||    
T  10905453 ttaggaatgtactttttgatatatccaggaaggcgggagtatcagtgaagaaggagg 10905397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 127; Significance: 1e-65; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 53785814 - 53785648
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||| ||||||||||||||||||||    
T  53785814 gtggccaaacacgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcggtttcctagcaccagaggttgttgaccttc 53785715  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||| |||||||    
T  53785714 tacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttatgtttac 53785648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 64 - 230
Target Start/End: Original strand, 39583231 - 39583397
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||| ||||||||| |||| | || |||||||||||||||    
T  39583231 gtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttatatcatttgttttcgacactttcggtttcctagcatcataggttgttgaccttc 39583330  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    | ||||||||||||| | |||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  39583331 tgcatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggttcatgaatgtcgtgtttac 39583397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 68 - 205
Target Start/End: Original strand, 52741518 - 52741655
Alignment:
Q  68 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 167  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||| |||| ||||||||||||||||||||||||    
T  52741518 ccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacacttttggtttcctagcaccagaggttgttgaccttctaca 52741617  T
Q  168 tagagttcaaaagttcatgcatagcaatgtcatgtctc 205  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  52741618 tagagttcaaaaggtcatgcatagcaatgtcatgtctc 52741655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 64 - 228
Target Start/End: Complemental strand, 44198872 - 44198708
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||| |||||||||  ||  ||| |||| |||||||||||    
T  44198872 gtggccaaacatgagaaagcgtgttctgagaatcaacatgcttttataccatttgcttttgacactttcggtttcttaacacccgaggctgttgaccttc 44198773  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 228  Q
    ||||||||||||| ||| | |||||||||||||||||||||| ||||| ||||||||||||||||    
T  44198772 tacatagagttcagaaggttatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttt 44198708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 64 - 227
Target Start/End: Complemental strand, 32546900 - 32546737
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||| ||||||| |||||||||||| |||||||| ||||||||||||||| |||| |||| |||| |||| ||| |||||||||||    
T  32546900 gtggccaaacatgagaaagcgtgttcggacaatcaacatacttttataccatttgcttttgacactttcagtttcctagcaccaaaggctgttgaccttc 32546801  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 227  Q
    ||||||||||||||||  |||||||||| ||||||||||||| ||||| |||||||||||||||    
T  32546800 tacatagagttcaaaaagtcatgcatagtaatgtcatgtctcctaggtccatgaatgttgtgtt 32546737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 70 - 229
Target Start/End: Original strand, 37133007 - 37133166
Alignment:
Q  70 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 169  Q
    |||||||||||| ||||||||||||||||||||| ||||||| |||||| |||| ||| |||||||||  ||| ||||||||||||||||||||||||||    
T  37133007 aaacatgagaaagcgtgttctgacaatcaacatgtttttataccatttgttttttacactttcggtttcttagcaccagaggttgttgaccttctacata 37133106  T
Q  170 gagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttta 229  Q
    |||||| |||| |||||||||||||||||||||||| || ||| ||||||||||||||||    
T  37133107 gagttctaaaggtcatgcatagcaatgtcatgtctcctaagttaatgaatgttgtgttta 37133166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 26772863 - 26772697
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| || || |||| | ||||||  ||||||||||    
T  26772863 gtggccaaacatcagaaaacgtgttctgacaatcaacatgcttttataccatttgcttttgacacttttggcttcctagcatcagaggcagttgaccttc 26772764  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    || ||||||| |||| | | ||||||| |||||| ||||||| ||||| ||||||||||||||||||    
T  26772763 tatatagagtacaaaggattatgcataacaatgttatgtctcctaggtccatgaatgttgtgtttac 26772697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 69 - 225
Target Start/End: Original strand, 26856769 - 26856925
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 168  Q
    |||| |||| ||| |||||| |||||||||||||||||||||| ||| ||||||||||  ||||| ||| |||| || ||||  ||||||||||||||||    
T  26856769 caaatatgataaagcgtgttgtgacaatcaacatgcttttataccatctgcttttgacgctttcgatttcctagcactagagactgttgaccttctacat 26856868  T
Q  169 agagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtg 225  Q
    |||||||||| | |||||||||||||||||||||||| |||||| ||||||||||||    
T  26856869 agagttcaaagggtcatgcatagcaatgtcatgtctcctaggtttatgaatgttgtg 26856925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 65 - 229
Target Start/End: Original strand, 54508386 - 54508551
Alignment:
Q  65 tggccaaacatgagaaaa-cgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||| ||||||||||||| | |||||||||||| |||||| ||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||    
T  54508386 tggctaaacatgagaaaaacttgttctgacaattaacatgtttttatatcatttgcttttgacatttttgattttctagcaccagaggttgttgaccttc 54508485  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttta 229  Q
    | ||||  || |||| | |||||| || |||| |||| |||  ||||| |||||||||||||||||    
T  54508486 tgcataaggtacaaaggatcatgcgtaacaatatcatatctgctaggtccatgaatgttgtgttta 54508551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 69 - 226
Target Start/End: Original strand, 38670887 - 38671044
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 168  Q
    ||||||||||||| |||||||||||||||||||||||||||||  ||||| |||||||| ||| || ||||||| | ||||||  | |||||||||||||    
T  38670887 caaacatgagaaagcgtgttctgacaatcaacatgcttttatacaatttgtttttgacacttttggctttctagcatcagaggcggatgaccttctacat 38670986  T
Q  169 agagt-tcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgt 226  Q
    ||||| | || |||| |||||||||||||| ||||||| ||||| ||||||||||||||    
T  38670987 agagtctaaagagtt-atgcatagcaatgttatgtctcctaggtccatgaatgttgtgt 38671044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 72 - 230
Target Start/End: Original strand, 38978809 - 38978967
Alignment:
Q  72 acatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacataga 171  Q
    ||||| |||||||| || |||||||||| ||| |||||||  ||||| |||||||| ||| ||||| |||| ||| ||||  |||||||||||||||| |    
T  38978809 acatgtgaaaacgtattttgacaatcaatatgtttttatactatttgtttttgacacttttggtttcctagcacctgaggccgttgaccttctacatata 38978908  T
Q  172 gttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||| | ||||||| ||||||||||||||||||||| || ||||||||||||||    
T  38978909 gttcaaaaggtgatgcataacaatgtcatgtctcataggtttatcaatgttgtgtttac 38978967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 65 - 230
Target Start/End: Original strand, 3443315 - 3443480
Alignment:
Q  65 tggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttct 164  Q
    ||||||||||||| |||  || |||| |||||||||||||||||||| ||||| || |||||| |||| |||| |||| || ||||||||||||||||||    
T  3443315 tggccaaacatgaaaaagtgtattctaacaatcaacatgcttttataccattttctgttgacactttcagtttcctagcactagaggttgttgaccttct 3443414  T
Q  165 acatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||||||| | |||||| ||| |||||| |||||| ||  |  |||||||||||||||||    
T  3443415 acatagagttcaaagggtcatgcgtaggaatgtcttgtctcctaaatctatgaatgttgtgtttac 3443480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 230
Target Start/End: Original strand, 52411903 - 52412059
Alignment:
Q  74 atgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagt 173  Q
    |||||| | ||||||||||||||||||||||||||||  ||||||||||||||| |||| | ||||||  || ||| || ||||||||||||||||||||    
T  52411903 atgagagagcgtgttctgacaatcaacatgcttttattccatttgcttttgacactttcagctttctaacactagatgtcgttgaccttctacatagagt 52412002  T
Q  174 tcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||| | ||||||||| |||||||||||||| |||   ||| ||| ||||||||||    
T  52412003 tcaaagggtcatgcataacaatgtcatgtctcctagacccataaatattgtgtttac 52412059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 71 - 230
Target Start/End: Complemental strand, 7900956 - 7900797
Alignment:
Q  71 aacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatag 170  Q
    ||||||||||| ||| ||||||||||||||||||||||||| |||||| |||||||| |||||| || |||| | |||||||||||||||||||||||||    
T  7900956 aacatgagaaagcgttttctgacaatcaacatgcttttataccatttgtttttgacactttcggcttcctagcatcagaggttgttgaccttctacatag 7900857  T
Q  171 agttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||  || | | || ||||||||||| |||| || ||||| ||| ||| || |||||||    
T  7900856 agtttgaaggattatacatagcaatgttatgtttcctaggtccatcaatattttgtttac 7900797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 90 - 230
Target Start/End: Complemental strand, 5338722 - 5338585
Alignment:
Q  90 tgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcat 189  Q
    ||||| ||||||||||||||||  |||||||||||||| |||||| || |||| || |||| |||||||| |||||||||||||||||||| |||||| |    
T  5338722 tgacagtcaacatgcttttatacaatttgcttttgacactttcggcttcctagcactagagattgttgacattctacatagagttcaaaaggtcatgcgt 5338623  T
Q  190 agcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||| ||||||||||||    |||||||||||||||    
T  5338622 agcaatgtcttgtctcataggt---cgaatgttgtgtttac 5338585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 76 - 230
Target Start/End: Complemental strand, 38146149 - 38145995
Alignment:
Q  76 gagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttc 175  Q
    |||| |||||||| |||||||||||||| ||||||| ||||| | ||||||| ||| |  || |||| ||||||||||||| || |||||| ||||||||    
T  38146149 gagacaacgtgttttgacaatcaacatgtttttataccatttacatttgacacttttgacttcctagcaccagaggttgtttacattctacttagagttc 38146050  T
Q  176 aaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||| | ||||||||| |||||||||||||| ||||| |||||| |||||||||||    
T  38146049 aaagggtcatgcataacaatgtcatgtctcctaggtccatgaacgttgtgtttac 38145995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 64 - 230
Target Start/End: Original strand, 7502013 - 7502178
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgctttt-atatcatttgcttttgacattttcggttttctagtaccagaggttgttgacctt 162  Q
    |||| ||||||||||||| |||||||  |||||||||||| |||| ||| ||||| ||||||||||||| ||||| |||| |||||||||||||||||||    
T  7502013 gtggtcaaacatgagaaagcgtgttcgaacaatcaacatgttttttataccattttcttttgacatttttggtttcctagcaccagaggttgttgacctt 7502112  T
Q  163 ctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||  |||||| ||| | ||||||| | |||||||||| ||||||| | ||||||| || |||||||    
T  7502113 ctac--agagtttaaagggtcatgcacaacaatgtcatgactcatagatccatgaatattatgtttac 7502178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 69 - 205
Target Start/End: Complemental strand, 51234716 - 51234580
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 168  Q
    ||||||||| ||| | |||| |||||| ||||||||||||||| |||||  |||||||| |||||  ||||||| | |||||||||||||||||||||||    
T  51234716 caaacatgaaaaagcatgttatgacaaccaacatgcttttataccatttatttttgacactttcgactttctagcatcagaggttgttgaccttctacat 51234617  T
Q  169 agagttcaaaagttcatgcatagcaatgtcatgtctc 205  Q
    |||||||||||| | ||||||| |||||| |||||||    
T  51234616 agagttcaaaaggttatgcataacaatgttatgtctc 51234580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 64 - 230
Target Start/End: Original strand, 46940772 - 46940941
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgacc--- 160  Q
    |||||||||||| ||||||| ||||| ||||||||||||||||||||| |||||| |||||||| ||| |   | |||| |||| ||  | ||||||       
T  46940772 gtggccaaacattagaaaacatgttccgacaatcaacatgcttttataccatttgtttttgacacttttgacgtcctagcaccatagactattgaccagc 46940871  T
Q  161 ttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||||||||||| | |||||||   |||||||||| ||||||||||||||||||||||||||||    
T  46940872 ttctacatagagttcaaaggatcatgcacgacaatgtcatgactcataggttcatgaatgttgtgtttac 46940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 69 - 230
Target Start/End: Complemental strand, 13582609 - 13582449
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 168  Q
    ||||||| |||||  ||||||||||||||||| || ||||||| |||||| |||| ||| ||| | ||| |||| ||||    ||||||||||||||||     
T  13582609 caaacataagaaagtgtgttctgacaatcaacgtgtttttataccatttgttttt-acacttttgatttcctagcaccaacaattgttgaccttctacag 13582511  T
Q  169 agagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||||| ||||||||| |||||||||||||| ||||  ||||||||||||||||||    
T  13582510 agagttcaaaaggtcatgcataacaatgtcatgtctcctaggaccatgaatgttgtgtttac 13582449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 229
Target Start/End: Complemental strand, 49018064 - 49017907
Alignment:
Q  68 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 167  Q
    ||||||||||||||  ||||||| |||||||||||| ||||||| |||||  |||| ||| ||||||||| |||| ||| ||||||||||| |||||||     
T  49018064 ccaaacatgagaaagtgtgttctaacaatcaacatgtttttataccattttttttttacactttcggtttcctagcacccgaggttgttgatcttctacg 49017965  T
Q  168 tagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttta 229  Q
    || |||||||||| |||||||||  ||||||||||    |||||  ||||||||||||||||    
T  49017964 taaagttcaaaaggtcatgcatataaatgtcatgt----taggtcaatgaatgttgtgttta 49017907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 70 - 230
Target Start/End: Complemental strand, 21552766 - 21552603
Alignment:
Q  70 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 169  Q
    ||||||| ||||| || || |||||||||||||||||| ||| |||||  ||||||||||||| |||| |||| | |||||  |||||||||||||||||    
T  21552766 aaacatgggaaaatgtattatgacaatcaacatgcttt-ataccatttatttttgacattttcagtttcctagcatcagagactgttgaccttctacata 21552668  T
Q  170 gagttcaaaagttcatgcatagca----atgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||||| |||||||||| |    || |||| |||| ||||| ||||||||||||||||||    
T  21552667 gagttcaaaaggtcatgcatagtacgtaatatcatatctcctaggtccatgaatgttgtgtttac 21552603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 68 - 228
Target Start/End: Complemental strand, 37992433 - 37992274
Alignment:
Q  68 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 167  Q
    ||||||||||| || | ||||||||||||||||||| ||||||||||||| |||||||   ||| || ||  ||| || |||||||||||||||||||||    
T  37992433 ccaaacatgaggaagcatgttctgacaatcaacatgattttatatcatttacttttgatggttttggcttcatagcactagaggttgttgaccttctaca 37992334  T
Q  168 tagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 228  Q
     ||||||| || | ||||||| || ||||||||| ||| || || ||||||||||||||||    
T  37992333 aagagttc-aagggtcatgcacagtaatgtcatgactcgtacgtgcatgaatgttgtgttt 37992274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 145 - 224
Target Start/End: Complemental strand, 44860 - 44781
Alignment:
Q  145 ccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgt 224  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||| ||||||||||||    
T  44860 ccagaggctgttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtttcctaggtccatgaatgttgt 44781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 70 - 230
Target Start/End: Complemental strand, 4473160 - 4473001
Alignment:
Q  70 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 169  Q
    |||||||| ||| |||||||| || ||||| ||| |||||||  ||||| |||||||| |||||| || |||| ||||||  || || ||||||||||||    
T  4473160 aaacatgaaaaagcgtgttctaaccatcaatatgtttttatactatttgtttttgacactttcggcttcctagcaccagaa-ttcttaaccttctacata 4473062  T
Q  170 gagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
     ||||||||   |||||||||||||| ||||||||| |||||  |||||| ||||||||||    
T  4473061 aagttcaaagaatcatgcatagcaatttcatgtctcctaggtctatgaatattgtgtttac 4473001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 70 - 199
Target Start/End: Complemental strand, 25325130 - 25324999
Alignment:
Q  70 aaacatgagaaaacgtgttctgacaatcaacat--gcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 167  Q
    |||||| | ||||||| || || ||||||||||  | ||||||| ||||||||||  ||| ||||| ||| |||| |||| || ||||||||||||||||    
T  25325130 aaacattataaaacgtattttggcaatcaacatatgtttttataccatttgctttcaacactttcgatttcctagcaccatagattgttgaccttctaca 25325031  T
Q  168 tagagttcaaaagttcatgcatagcaatgtca 199  Q
    ||||||||||| | ||||||||||||||||||    
T  25325030 tagagttcaaatgatcatgcatagcaatgtca 25324999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 4763888 - 4763960
Alignment:
Q  157 gaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||| | ||| ||||||||||||||||||    
T  4763888 gaccttctacatagagttcaaaaggttatgcatagcaatgtcatgtctcct-ggtccatgaatgttgtgtttac 4763960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 29862148 - 29862090
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggc 59  Q
    |||||||||||||||||||||||||| |  ||||||||||||| |||||||||||||||    
T  29862148 gttagggatgtactttttgatatattcaggcaggcgggagtattagtgaagaaagaggc 29862090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 169
Target Start/End: Original strand, 3376748 - 3376848
Alignment:
Q  70 aaacatgagaaaacgtgttctgacaatcaacatgcttt-tatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 168  Q
    |||||||| ||||| | |||| |||||||||||  ||| || | |||||||||||||| |||| ||||| |||| || ||||||||||||||||||||||    
T  3376748 aaacatgataaaacatattctcacaatcaacatattttatagaccatttgcttttgacttttttggtttcctagcactagaggttgttgaccttctacat 3376847  T
Q  169 a 169  Q
    |    
T  3376848 a 3376848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 53786060 - 53785995
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcgcttgtg 66  Q
    |||||||||||||||||||||||||| | || ||| ||||||||||||||||| || |||| ||||    
T  53786060 gttagggatgtactttttgatatattcagacgggcaggagtatcagtgaagaaggaagcgcatgtg 53785995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 230
Target Start/End: Original strand, 464977 - 465049
Alignment:
Q  158 accttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||||| |||||| ||  ||||||||| |||| | |||| |||||| ||||||||||||||||||||    
T  464977 accttctacatatagttcataaagtcatgcataacaatattatgtttcatagattcatgaatgttgtgtttac 465049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 25094665 - 25094737
Alignment:
Q  155 ttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 227  Q
    ||||||||||||||| |||||||| | |||||||||||||||| || |||  || || |||||||||||||||    
T  25094665 ttgaccttctacatatagttcaaatggtcatgcatagcaatgtaatatcttttaagtccatgaatgttgtgtt 25094737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 229
Target Start/End: Complemental strand, 43123229 - 43123085
Alignment:
Q  85 tgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttca 184  Q
    ||||||||||||||||||| | |||||  |||| |  |||||| ||| | |||||||| |||| || |||||||| ||||||| | |||||||| | ||     
T  43123229 tgttctgacaatcaacatgttgttatactatttacgattgacacttttgattttctagcaccatagtttgttgactttctacaaaaagttcaaagggtcg 43123130  T
Q  185 tgcatagcaatgtcatgtctcataggttcatgaatgttgtgttta 229  Q
    ||||||| ||| | |||||| ||||||  || ||| |||||||||    
T  43123129 tgcatagaaatattatgtcttataggtcaataaatattgtgttta 43123085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 39582985 - 39583044
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcg 60  Q
    |||||||||||| ||||| ||||| ||||  |||||||||||||||||||||| ||||||    
T  39582985 gttagggatgtaattttttatatacttaataaggcgggagtatcagtgaagaaggaggcg 39583044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 52741267 - 52741326
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcg 60  Q
    |||||||||||| ||||||||||||| | || ||||||| ||||||||||||| ||||||    
T  52741267 gttagggatgtaatttttgatatattcagacgggcgggaatatcagtgaagaaggaggcg 52741326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 35236479 - 35236414
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcgcttgtg 66  Q
    |||| ||||||||||||| |||||||||  | ||||||||||| ||||||||| ||||||| ||||    
T  35236479 gttaaggatgtacttttttatatatttaggcgggcgggagtatgagtgaagaaggaggcgcatgtg 35236414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 195
Target Start/End: Original strand, 4669086 - 4669130
Alignment:
Q  151 gttgttgaccttctacatagagttcaaaagttcatgcatagcaat 195  Q
    |||||||||||||||||||||||||| ||| ||||||||| ||||    
T  4669086 gttgttgaccttctacatagagttcagaagatcatgcataacaat 4669130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 13772549 - 13772491
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgaca 127  Q
    |||||||||||||||||||||   |||||||||  |||||||| ||||||| |||||||    
T  13772549 caaacatgagaaaacgtgttccatcaatcaacacacttttataccatttgcgtttgaca 13772491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 3643149 - 3643092
Alignment:
Q  171 agttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 228  Q
    |||||||| | ||||||||| ||||||||||| |  ||||| ||||||||||||||||    
T  3643149 agttcaaaggatcatgcataacaatgtcatgttttttaggtccatgaatgttgtgttt 3643092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 49018314 - 49018262
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaa 53  Q
    ||||||||||| |||||||||||||| | || ||| |||||||| ||||||||    
T  49018314 gttagggatgtgctttttgatatattcagacgggcaggagtatcggtgaagaa 49018262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 2e-61; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 64 - 227
Target Start/End: Original strand, 4413068 - 4413231
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||| ||||||| ||||||||||||    
T  4413068 gtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcggtttcctagcaccagagattgttgaccttc 4413167  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 227  Q
    ||||||| ||||||||| ||||||||||||| |||||||||| ||||| |||||||||||||||    
T  4413168 tacatagggttcaaaaggtcatgcatagcaaagtcatgtctcctaggtccatgaatgttgtgtt 4413231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 17344743 - 17344577
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    ||||||||||| ||||||||||||| | |||||||||||||||||||| ||||||||||||||| |||| |||| |||| |||| ||| |||||||||||    
T  17344743 gtggccaaacacgagaaaacgtgttttcacaatcaacatgcttttataccatttgcttttgacactttcagtttcctagcaccataggctgttgaccttc 17344644  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||||||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||    
T  17344643 tacatagagttcaaaaggtcatgcataacaatgtcatgtctcctaggtccatgaatgttgtgtttac 17344577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 64 - 230
Target Start/End: Original strand, 41867910 - 41868076
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||| ||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||| |||||| || |||| |||||||| |||||||||||    
T  41867910 gtggtcaaacatgagaaagcatgttctgacaatcaacatgcttttataccatttgcttttgacactttcgggttcctagcaccagaggctgttgaccttc 41868009  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||||||||||| ||||||||| ||||||||||||||  |||| ||||||||||||||||||    
T  41868010 tacatagagttcaaaaggtcatgcataacaatgtcatgtctcccaggtccatgaatgttgtgtttac 41868076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 64 - 229
Target Start/End: Original strand, 18744956 - 18745121
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    ||||||||||| |||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||| |||| ||| ||||| |||||    
T  18744956 gtggccaaacacgagaaagcgtgttctgacaatcaacatacttttataccatttgcttttgacattttcgattttctagcaccataggctgttggccttc 18745055  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttta 229  Q
    ||||||||||||||||| ||||||||||||||||||| | || |||||  ||||||||||||||||    
T  18745056 tacatagagttcaaaagatcatgcatagcaatgtcatatttcctaggtctatgaatgttgtgttta 18745121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 64 - 227
Target Start/End: Original strand, 9685417 - 9685580
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||| ||| | |||||||| || ||||| ||| |||||||    
T  9685417 gtggccaaacatgaaaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacacttttgattttctagcactagaggctgtggaccttc 9685516  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 227  Q
    || |||||||||||||| ||||| |||||||||||||||||| ||||| |||||||||||||||    
T  9685517 tatatagagttcaaaaggtcatggatagcaatgtcatgtctcctaggtccatgaatgttgtgtt 9685580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 64 - 228
Target Start/End: Original strand, 19161785 - 19161949
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||| ||||||||| ||| ||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||| ||  || ||||| || | |||||     
T  19161785 gtgggcaaacatgaaaaagcgtgttctgacaatcaacatgtttttataccatttgcttttgacactttcggttttgtaacactagaggctgcttaccttt 19161884  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 228  Q
    ||||||||||||||||| ||||||||| |||||||||||||| |||||  ||||||  |||||||    
T  19161885 tacatagagttcaaaaggtcatgcatatcaatgtcatgtctcctaggtcaatgaatagtgtgttt 19161949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 63 - 230
Target Start/End: Complemental strand, 44686526 - 44686355
Alignment:
Q  63 tgtggccaaacatgagaaaacgtgttctgacaatcaa----catgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttga 158  Q
    ||||||||||||||||||| |||||||||||||||||    |||||||||||||  || |||||||||| |||||| || |||| | ||||| |||||||    
T  44686526 tgtggccaaacatgagaaagcgtgttctgacaatcaatcaacatgcttttatattgttcgcttttgacactttcggcttcctagcatcagagtttgttga 44686427  T
Q  159 ccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||||||| | |||| | | |||||||||||||| ||||||| ||||| | ||||||||||||||||    
T  44686426 ccttctacatagattccaaagggttatgcatagcaatgttatgtctcctaggtccgtgaatgttgtgtttac 44686355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 68 - 229
Target Start/End: Complemental strand, 28225101 - 28224940
Alignment:
Q  68 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 167  Q
    ||||| |||||||| ||| ||||||||||||||||||||||||| ||||||||||||||| |||||| || ||||   ||||||||||||||||||||||    
T  28225101 ccaaatatgagaaagcgtattctgacaatcaacatgcttttataccatttgcttttgacactttcggcttcctagcttcagaggttgttgaccttctaca 28225002  T
Q  168 tagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttta 229  Q
    |||||| |||| | | ||||||  |||| | ||||||| |||||  ||||||||||||||||    
T  28225001 tagagtccaaaggattatgcatgacaatattatgtctcctaggtcaatgaatgttgtgttta 28224940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 113 - 229
Target Start/End: Complemental strand, 13413407 - 13413291
Alignment:
Q  113 catttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggtt 212  Q
    |||||| |||||||| ||||||||||| || | |||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||     
T  13413407 catttgtttttgacactttcggttttcaagcagcagaggctgttgaccttctacatagagttcaaaaggtcatgcataacaatgtcatgtctcctaggtc 13413308  T
Q  213 catgaatgttgtgttta 229  Q
    |||||||||||||||||    
T  13413307 catgaatgttgtgttta 13413291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 69 - 211
Target Start/End: Original strand, 34814826 - 34814967
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 168  Q
    ||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||| |||||| || |||  |||||||  ||||||||||||||||    
T  34814826 caaacatgagaaagcgtgttctgacaatcaatatgcttttataccatttgctttcgacactttcgg-ttcctaacaccagagactgttgaccttctacat 34814924  T
Q  169 agagttcaaaagttcatgcatagcaatgtcatgtctcataggt 211  Q
    |||||||||| | ||||||||| |||||| ||||||| |||||    
T  34814925 agagttcaaatggtcatgcataacaatgttatgtctcttaggt 34814967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 90 - 211
Target Start/End: Original strand, 20142753 - 20142874
Alignment:
Q  90 tgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcat 189  Q
    |||||||||||||||||||||| ||||| ||||||||| ||| |||||||||| | || |||||||||||||| ||||||||||||||||| |||| |||    
T  20142753 tgacaatcaacatgcttttataccattttcttttgacacttttggttttctagcatcaaaggttgttgaccttatacatagagttcaaaaggtcatacat 20142852  T
Q  190 agcaatgtcatgtctcataggt 211  Q
    | |||||||||||||| |||||    
T  20142853 aacaatgtcatgtctcctaggt 20142874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 5532524 - 5532360
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||  |||| ||||||||| |||  | || |||| |||| |||||||||| ||||    
T  5532524 gtggtcaaacatgagaaaacgtgttgtgacaatcaacatgcttttatactatttacttttgacacttt-agcttcctagcaccataggttgttgagcttc 5532426  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||||||||| | ||||||| | ||||| |||| ||| || ||||||||||| |||||||||    
T  5532425 tacatagagttcaaagggtcatgcacaacaatgccatgactcctaagttcatgaatg-tgtgtttac 5532360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 84 - 229
Target Start/End: Original strand, 2886637 - 2886781
Alignment:
Q  84 gtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttc 183  Q
    |||||||||||||||||||| |||||||||||||| |||||| ||||||||||| | || | |||||| |||||| ||| |||||||||||||||||  |    
T  2886637 gtgttctgacaatcaacatgtttttatatcatttgtttttgatattttcggtttccaagcatcagaggctgttgatcttttacatagagttcaaaagagc 2886736  T
Q  184 atgcatagcaatgtcatgtctcataggttcatgaatgttgtgttta 229  Q
    |||||||||||| |||| |||| | ||| ||| |||||||||||||    
T  2886737 atgcatagcaatatcatatctcgt-ggtccataaatgttgtgttta 2886781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 64 - 230
Target Start/End: Original strand, 16351843 - 16352012
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttc---ggttttctagtaccagaggttgttgacc 160  Q
    |||| |||||||||||||| ||||||| |||||||||||  ||||||||  |||||||||||||||||    || | | ||  | |||||||||||||||    
T  16351843 gtggtcaaacatgagaaaatgtgttctcacaatcaacataattttatattgtttgcttttgacattttgtttggctctttatcatcagaggttgttgacc 16351942  T
Q  161 ttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||||||||||| | ||||||| | |||||||||||||| ||||| ||||||| || |||||||    
T  16351943 ttctacatagagttcaaatggtcatgcacaacaatgtcatgtctcttaggtacatgaatattatgtttac 16352012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 230
Target Start/End: Original strand, 7760848 - 7761013
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||| |||||||||||||| ||| ||||||| |||  |||  ||  |||||| || ||||  || |||||||||  ||||||||||||||||||||    
T  7760848 gtggccaatcatgagaaaacgtgatctaacaatca-catattttcttacgatttgcattagacacctttggttttctatcaccagaggttgttgaccttc 7760946  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||||||||| | |||||| ||||||||| |||||||||| ||||| ||||| |||| ||||    
T  7760947 tacatagagttcaaaggatcatgcgtagcaatgtgatgtctcataagttcaagaatgatgtgcttac 7761013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 64 - 230
Target Start/End: Original strand, 23484940 - 23485104
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    ||||||||| |||||||| | ||||||||||||||||||||||||||| |||||| ||||||||  ||| |||| |||| |||||| |    |||| |      
T  23484940 gtggccaaatatgagaaagcatgttctgacaatcaacatgcttttataccatttgtttttgaca-cttctgtttcctagcaccaga-gacaatgacttct 23485037  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||||||||||| ||||||||| |||||  ||||||| ||||| |||||| |||||||||||    
T  23485038 tacatagagttcaaaagatcatgcataacaatgctatgtctcctaggtccatgaacgttgtgtttac 23485104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 230
Target Start/End: Original strand, 32029108 - 32029254
Alignment:
Q  84 gtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttc 183  Q
    |||||| ||||||||||||||||| |||||||||| |||||||| |||| | || | |    |||||| ||||||||||||||||||||||||||   ||    
T  32029108 gtgttcagacaatcaacatgctttcatatcatttgtttttgacactttcagcttcccaacttcagaggctgttgaccttctacatagagttcaaagagtc 32029207  T
Q  184 atgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    || |||| ||||||||||||| ||||| |||||||| | ||||||||    
T  32029208 atccataacaatgtcatgtcttataggatcatgaatatcgtgtttac 32029254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 205
Target Start/End: Complemental strand, 2888621 - 2888480
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||| |||| | || ||||| ||| || || |||  || |||||||||||||||||    
T  2888621 gtggacaaacatgagaaaacgtgttctgacaatcaacatgtttttataccattcgtttatgacacttttggcttcctaacacaagaggttgttgaccttc 2888522  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctc 205  Q
    |||| |  ||||||||  ||||||| | ||||||||| ||||    
T  2888521 tacacaaggttcaaaatgtcatgcacaacaatgtcatatctc 2888480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 27502467 - 27502301
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgctttt-gacattttcggttttctagtaccagaggttgttgacctt 162  Q
    |||| ||||||||||||||||||||| ||||| ||||||||||||||| || |||||||| |||| |||||  || |||| | || |   ||||||||||    
T  27502467 gtggtcaaacatgagaaaacgtgttccgacaaacaacatgcttttata-caattgctttttgacactttcgacttcctagcatcatatactgttgacctt 27502369  T
Q  163 ctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||| | |||| | | |||||||||||| ||||||||| ||| |  |||||||||||||||||    
T  27502368 ctacatagaatccaaagggttatgcatagcaatatcatgtctcctagatctatgaatgttgtgtttac 27502301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 89 - 229
Target Start/End: Complemental strand, 3825806 - 3825666
Alignment:
Q  89 ctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgca 188  Q
    ||||||||| ||||| |||||| ||||||||||  |||| ||||  ||| |||| | || ||||||||||||||| |||| |||||||||   |||||||    
T  3825806 ctgacaatctacatgtttttatttcatttgcttcagacactttcaatttcctagcatcaaaggttgttgaccttcaacatcgagttcaaagaatcatgca 3825707  T
Q  189 tagcaatgtcatgtctcataggttcatgaatgttgtgttta 229  Q
    ||||||||||||||||  ||||  ||| |||||||||||||    
T  3825706 tagcaatgtcatgtcttctaggaccataaatgttgtgttta 3825666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 230
Target Start/End: Original strand, 13147099 - 13147268
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacat---gcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgacc 160  Q
    |||| ||||||||||||| |||||||||||||||| |||     ||||||| |||||| |||||||| ||| |||||||||  ||||||| |||||||||    
T  13147099 gtggtcaaacatgagaaagcgtgttctgacaatcagcatatactttttataccatttgattttgacacttttggttttctaacaccagagattgttgacc 13147198  T
Q  161 ttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||| |||| ||| |||| | || |||| | ||||||| |||||  || |||||||||| |||| |||||    
T  13147199 ttcttcatatagtacaaagggtcgtgcacaacaatgtcttgtcttctaagttcatgaatattgtatttac 13147268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 70 - 228
Target Start/End: Original strand, 33612555 - 33612711
Alignment:
Q  70 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 169  Q
    ||||||||||||||||||| |||||||||||||| |||||||  |||||  ||||||| ||| || || |||  ||| |||||||||||| |||||||      
T  33612555 aaacatgagaaaacgtgttttgacaatcaacatgattttatacaatttgtatttgacacttttggcttcctaacaccggaggttgttgacattctaca-- 33612652  T
Q  170 gagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 228  Q
    ||||||| | | ||   |||||||||||| |||| | ||||| ||||||||||||||||    
T  33612653 gagttcagagggtcgctcatagcaatgtcttgtcccctaggtccatgaatgttgtgttt 33612711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 11921218 - 11921326
Alignment:
Q  70 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 169  Q
    |||||| ||||||||||||||||||||||||||  ||||||| | |||| |||| | | ||||  |||||| ||| || ||  |||||||||||||||||    
T  11921218 aaacattagaaaacgtgttctgacaatcaacatatttttataccgtttgttttttatactttcaattttctggtatcatagactgttgaccttctacata 11921317  T
Q  170 gagttcaaa 178  Q
    |||||||||    
T  11921318 gagttcaaa 11921326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 4412822 - 4412880
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggc 59  Q
    |||||||||||||||||||||||||| |||| ||||||| ||||||||||||| |||||    
T  4412822 gttagggatgtactttttgatatattcaaacgggcgggaatatcagtgaagaaggaggc 4412880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 230
Target Start/End: Complemental strand, 44720427 - 44720261
Alignment:
Q  65 tggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgaca-ttttcggttttctagtaccagaggttgttgaccttc 163  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||| | ||||  ||| ||| ||||  | || |||  ||||||||||||| || ||     
T  44720427 tggccaaacatgaaaaaacgtgttatgacaatcaacatgtttttataccgtttgaatttaacatttttttgcttcctaacaccagaggttgttcactttt 44720328  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||| |||||||| | ||||||||| |||| |  | |||||||||| ||| |||  |||||||||    
T  44720327 tacataaagttcaaaggatcatgcataacaatattttatctcataggtccataaataatgtgtttac 44720261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 17344989 - 17344924
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcgcttgtg 66  Q
    |||||||||||||||||||||||||| | || ||| ||||||||||||||||| ||||||| ||||    
T  17344989 gttagggatgtactttttgatatattcagacgggcaggagtatcagtgaagaaggaggcgcctgtg 17344924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 20142496 - 20142555
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcg 60  Q
    |||||||||||||||||||||||||| | || ||||||| ||||||||||||| ||||||    
T  20142496 gttagggatgtactttttgatatattcagacgggcgggaatatcagtgaagaaggaggcg 20142555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 29808175 - 29808070
Alignment:
Q  68 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 167  Q
    |||||||||||| | |||||| | |||||||||||| ||||||| ||||||||||| ||||| |   ||| |||| | | ||||||||||||||| ||||    
T  29808175 ccaaacatgagacagcgtgttataacaatcaacatg-ttttataccatttgcttttcacattatttatttcctagcatcggaggttgttgaccttttaca 29808077  T
Q  168 tagagtt 174  Q
    |||||||    
T  29808076 tagagtt 29808070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 44684955 - 44685025
Alignment:
Q  159 ccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttta 229  Q
    |||||||||||||||||||| | ||||||||| |||| | |||||| ||| || |||||||||||||||||    
T  44684955 ccttctacatagagttcaaagggtcatgcataacaatattatgtcttataagtccatgaatgttgtgttta 44685025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 197
Target Start/End: Original strand, 3968411 - 3968544
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||| |||| |||||||||| |||| |||||||||| |||||||||||  |||||| ||||||||||| |  ||  ||||| | ||| ||||| ||||||    
T  3968411 gtggtcaaatatgagaaaacatgttttgacaatcaatatgcttttatacaatttgcgtttgacatttttgacttcatagtatctgagtttgttaaccttc 3968510  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgt 197  Q
    || | | |||||||| | ||| ||||| ||||||    
T  3968511 tataaaaagttcaaaggatcacgcataacaatgt 3968544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 211
Target Start/End: Original strand, 8036566 - 8036633
Alignment:
Q  146 cagaggttgttgaccttctacatagagttcaaaagttcatgc--atagcaatgtcatgtctcataggt 211  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||  ||| |||||||||||||| |||||    
T  8036566 cagaggttgttgaccttttacatagagttcaaaggtttatgcatatatcaatgtcatgtctcctaggt 8036633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 41867664 - 41867722
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggc 59  Q
    ||||||||||| |||||||||||||| | || ||||||| ||||||||||||| |||||    
T  41867664 gttagggatgttctttttgatatattcatacgggcgggaatatcagtgaagaaggaggc 41867722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 44686762 - 44686712
Alignment:
Q  8 atgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagagg 58  Q
    ||||||||||||||||||| | || ||||||||||||||||||||| ||||    
T  44686762 atgtactttttgatatattcagacgggcgggagtatcagtgaagaaggagg 44686712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 1296053 - 1296099
Alignment:
Q  65 tggccaaacatgagaaaacgtgttctgacaatcaacatgcttttata 111  Q
    ||||||||||||||||||  |||||||||||| |||||| |||||||    
T  1296053 tggccaaacatgagaaaatatgttctgacaataaacatgtttttata 1296099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 9685171 - 9685229
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggc 59  Q
    ||||||||||||||||| |||||||| | || ||||| ||||| ||||||||| |||||    
T  9685171 gttagggatgtacttttcgatatattcagacgggcggaagtattagtgaagaaggaggc 9685229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 27502712 - 27502647
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcgcttgtg 66  Q
    ||||| |||||||||||||||||||| ||    |||||||||||| ||||||| ||||||| ||||    
T  27502712 gttagagatgtactttttgatatattcaagtgagcgggagtatcactgaagaaggaggcgcctgtg 27502647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 18744710 - 18744762
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaa 53  Q
    ||||||||| |||||||||||||||| | || ||| ||||||||||| |||||    
T  18744710 gttagggatatactttttgatatattcagacgggcaggagtatcagtaaagaa 18744762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 6e-61; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 38815399 - 38815233
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||| | || |||| |||||||| |||||||||||    
T  38815399 gtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttccgcttcctagcaccagagggtgttgaccttc 38815300  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||||||||| | |||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  38815299 tacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtttac 38815233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 65 - 230
Target Start/End: Complemental strand, 24125132 - 24124967
Alignment:
Q  65 tggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttct 164  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||| ||| | ||| |||| |||||||||||||| ||||||    
T  24125132 tggccaaacatgagaaagcgtgctctgacaatcaacatgcttttataccatttgcttttgacaattttgatttcctagcaccagaggttgttggccttct 24125033  T
Q  165 acatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24125032 acataaagttcaaaaggtcatgcatagcaatgtcatgtctcataggtccatgaatgttgtgtttac 24124967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 6592680 - 6592515
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||| |||||||| |||||||||||| ||||| | ||||||||||||||| |||| |||| ||||  |||||||||||||||||||    
T  6592680 gtggccaaacatgagaaagcgtgttctcacaatcaacatgattttaaaccatttgcttttgacactttcagtttcctagctccagaggttgttgaccttc 6592581  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    | ||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||    
T  6592580 tgcatagagttcaaaaggtcatgcata-taatgtcatgtctcataggttcatgaatgttgtgtttac 6592515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 64 - 198
Target Start/End: Complemental strand, 500332 - 500199
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||  ||||| ||||| |||||    
T  500332 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttataccatttacttttgacattttcggtttcctagtatgagagg-tgttggccttc 500234  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtc 198  Q
    ||||||||||||||||| ||||||||| |||||||    
T  500233 tacatagagttcaaaaggtcatgcatatcaatgtc 500199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 3188074 - 3187909
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    ||||| ||||||||| || ||||||||||||||||||||||||||||| ||||||||||||| | |||||| || |||| | ||||||||||| ||||||    
T  3188074 gtggcaaaacatgaggaagcgtgttctgacaatcaacatgcttttataccatttgcttttgaaactttcggcttcctagcatcagaggttgttaaccttc 3187975  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||| ||||| | | |||||||||||||| ||||||| ||||| ||||||||||||||||||    
T  3187974 tacatagag-tcaaagggttatgcatagcaatgttatgtctcctaggtccatgaatgttgtgtttac 3187909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 64 - 212
Target Start/End: Original strand, 35739988 - 35740136
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||| || |||||||||||||||||| |||||||  ||| |||||||||| |||| |||| |||| ||||||| ||||||||||||    
T  35739988 gtggccaaacatgagaaagcgggttctgacaatcaacatgtttttatacaattagcttttgacactttcagtttcctagcaccagagattgttgaccttc 35740087  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggtt 212  Q
    ||||||||||||||||  ||||||||| |||||||||||| | ||||||    
T  35740088 tacatagagttcaaaaagtcatgcataacaatgtcatgtcccctaggtt 35740136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 70 - 230
Target Start/End: Complemental strand, 6618383 - 6618224
Alignment:
Q  70 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 169  Q
    |||||||||||| |||||||| |||||||||||| ||||| | ||||||||||||||| |||| |||| ||||  |||||| ||||||||||| | ||||    
T  6618383 aaacatgagaaagcgtgttctcacaatcaacatgattttaaaccatttgcttttgacactttcagtttcctagctccagagattgttgaccttttgcata 6618284  T
Q  170 gagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    | ||||||||| |||||||||  ||||||||||||||||||| |||||||||| |||||||    
T  6618283 gcgttcaaaaggtcatgcata-taatgtcatgtctcataggtccatgaatgttatgtttac 6618224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 39434772 - 39434606
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| ||| |  || |||| | ||||||   |||| ||||    
T  39434772 gtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgtttttgacacttttgacttcctagcatcagaggcatttgatcttc 39434673  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||| |||| | | ||||||| |||||| ||||||| ||| | ||||||||||||||||||    
T  39434672 tacatagagtccaaagggttatgcatatcaatgtaatgtctcttagatccatgaatgttgtgtttac 39434606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 74 - 230
Target Start/End: Original strand, 25021826 - 25021982
Alignment:
Q  74 atgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagt 173  Q
    ||||||||  ||||||| |||||||||||| ||||||| ||||| ||||||||||||| || || |||| ||||||||||||||||| || ||| | |||    
T  25021826 atgagaaagtgtgttctcacaatcaacatgtttttataccattttcttttgacatttttggcttcctagcaccagaggttgttgaccatccacacaaagt 25021925  T
Q  174 tcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||| | ||||||| | ||||||||| |||| ||||| || |||||||||||||||    
T  25021926 tcaaagggtcatgcacaacaatgtcatatctcctaggtccaggaatgttgtgtttac 25021982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 92 - 224
Target Start/End: Complemental strand, 37514298 - 37514166
Alignment:
Q  92 acaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatag 191  Q
    ||||||||||||| ||||||  |||||||||||||| ||||  ||| ||||  ||||||| |||||||||||||||||||||||||||| |||||||||     
T  37514298 acaatcaacatgcgtttatactatttgcttttgacactttcaatttcctagcgccagaggctgttgaccttctacatagagttcaaaaggtcatgcatat 37514199  T
Q  192 caatgtcatgtctcataggttcatgaatgttgt 224  Q
    |||||| | ||||| ||||| ||||||||||||    
T  37514198 caatgttacgtctcttaggtccatgaatgttgt 37514166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 120 - 227
Target Start/End: Original strand, 22589395 - 22589501
Alignment:
Q  120 ttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaat 219  Q
    |||||||| ||||||||| |||| |||||||| ||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||    
T  22589395 ttttgacactttcggtttcctagcaccagaggctgttgacttt-tacatagagttcaaaaggtcatgcatagcaatgtcatgtctcataggtctatgaat 22589493  T
Q  220 gttgtgtt 227  Q
    ||||||||    
T  22589494 gttgtgtt 22589501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 139 - 230
Target Start/End: Complemental strand, 3821254 - 3821163
Alignment:
Q  139 ctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||| ||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||| ||||||||| |||||| |||||||    
T  3821254 ctagaaccagaggttgttgaccttctacatagagttcaaagggtaatgcatagcaatgtcatgtctcctaggttcataaatgttatgtttac 3821163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 64 - 178
Target Start/End: Complemental strand, 8882432 - 8882319
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||| | |||||| |||||| | |||| ||||||||| ||||||||||||||| | |     
T  8882432 gtggccaaacatgagaaagcgtgttctgacaatcaatatgcttttaaaccatttgtttttga-actttcagttttctagcaccagaggttgttgaacatt 8882334  T
Q  164 tacatagagttcaaa 178  Q
     ||||||||||||||    
T  8882333 cacatagagttcaaa 8882319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 230
Target Start/End: Complemental strand, 28196291 - 28196131
Alignment:
Q  70 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 169  Q
    ||||||||||||  ||||| ||| ||| |||||| ||||||| |||||| |||||||| ||| |  || |||| |||| |||||||||||| ||||| ||    
T  28196291 aaacatgagaaagtgtgttatgataataaacatgtttttataccatttgtttttgacacttttgtcttcctagcaccataggttgttgaccatctacgta 28196192  T
Q  170 gagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||| | ||||||| | |||||||||||||| ||| | || | |||||||||||||    
T  28196191 gagttcaaaggatcatgcacaacaatgtcatgtctcctagatccacggatgttgtgtttac 28196131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 4073640 - 4073473
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggt-tttctagtaccagaggttgttgacctt 162  Q
    |||| |||||| ||||||||||||| |  ||||||||||| |||||||  |||||| ||||||| ||| |   ||| |||||||||||||||||||||||    
T  4073640 gtggtcaaacaagagaaaacgtgttttaccaatcaacatgattttatacaatttgcatttgacacttttgccatttttagtaccagaggttgttgacctt 4073541  T
Q  163 ctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||| |||  ||||    ||||||||||||||||||||| ||  || | | ||||||||||||||||    
T  4073540 ctacagagaaatcaatgagtcatgcatagcaatgtcatgtttccaagatccgtgaatgttgtgtttac 4073473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 69 - 178
Target Start/End: Complemental strand, 8619914 - 8619805
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 168  Q
    ||||||||| ||| ||| || ||||||||||| |||||||||| |||||| |||| ||||||| || ||||||  |||||||||||||||| ||| ||||    
T  8619914 caaacatgaaaaagcgtattttgacaatcaacgtgcttttataccatttgtttttaacatttttggctttctaacaccagaggttgttgactttcgacat 8619815  T
Q  169 agagttcaaa 178  Q
    |||| |||||    
T  8619814 agagctcaaa 8619805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 18804642 - 18804567
Alignment:
Q  139 ctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttca 214  Q
    |||| |||||||| ||||||||||||||||||| |||||||| ||||||||| |||||||||| ||| ||||||||    
T  18804642 ctagcaccagaggctgttgaccttctacatagatttcaaaaggtcatgcataacaatgtcatgactcctaggttca 18804567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 222
Target Start/End: Original strand, 39671173 - 39671332
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttg-acattttcggttttctagtaccagaggttgttgacctt 162  Q
    ||||||||||  |||||| |||||| ||||||| |||||| |||||||  ||||  ||||  |||||||||| || |||| ||||||||||||| |||||    
T  39671173 gtggccaaaccagagaaagcgtgttttgacaattaacatgtttttatacaatttatttttttacattttcggcttcctagcaccagaggttgttaacctt 39671272  T
Q  163 ctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgtt 222  Q
     ||| ||||||| ||| | ||||| |||  ||||||||||||| ||| | ||||||||||    
T  39671273 ttacgtagagttaaaagggtcatgaataaaaatgtcatgtctcctagatccatgaatgtt 39671332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 64 - 202
Target Start/End: Complemental strand, 8115916 - 8115779
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||| ||||| | ||||| | |||||| | |||||| || |||||||| ||||||| ||||||| ||| |||||| ||  |  |||||||||||||||||    
T  8115916 gtggtcaaacgtaagaaatcttgttctaataatcaatatacttttataccatttgcatttgacacttttggttttttaa-atgagaggttgttgaccttc 8115818  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgt 202  Q
    |||||| |||||||| | |||||||| ||||||||||||    
T  8115817 tacataaagttcaaaggatcatgcattgcaatgtcatgt 8115779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 200
Target Start/End: Complemental strand, 3863387 - 3863286
Alignment:
Q  99 acatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtc 198  Q
    ||||||||||||  ||||||| | ||||| ||| || || |||| |||||||||| |||||||||||||||||||||||| | |  ||||||||||||||    
T  3863387 acatgcttttattccatttgcatgtgacacttttggcttcctaggaccagaggttattgaccttctacatagagttcaaagggtagtgcatagcaatgtc 3863288  T
Q  199 at 200  Q
    ||    
T  3863287 at 3863286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 200
Target Start/End: Original strand, 40223480 - 40223541
Alignment:
Q  139 ctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcat 200  Q
    |||| ||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  40223480 ctagcaccggaggttgttgaccttctacatagagttcaaaaggtcatgcataacaatgtcat 40223541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 230
Target Start/End: Complemental strand, 43824053 - 43823928
Alignment:
Q  105 ttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtct 204  Q
    ||||||| ||||||||||||||| ||| || || || | |  ||||| | ||||||||  |||||||||||||| | |||||||||||||||||||||||    
T  43824053 ttttataccatttgcttttgacacttttggcttccttgcattagaggctattgacctttcacatagagttcaaatggtcatgcatagcaatgtcatgtct 43823954  T
Q  205 cataggttcatgaatgttgtgtttac 230  Q
    |  || | ||| ||||||||||||||    
T  43823953 ccgagatccattaatgttgtgtttac 43823928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 99 - 230
Target Start/End: Complemental strand, 3825705 - 3825574
Alignment:
Q  99 acatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtc 198  Q
    ||||||||||||  ||||||| | |||||  || || || |||| |||| ||||||||||||||||||| ||| ||||||   | ||||||||||| |||    
T  3825705 acatgcttttattccatttgcatgtgacacctttggcttcctagaaccataggttgttgaccttctacacagaattcaaagagtaatgcatagcaacgtc 3825606  T
Q  199 atgtctcataggttcatgaatgttgtgtttac 230  Q
    |||| |||||| | ||||||| ||||||||||    
T  3825605 atgtttcatagatccatgaatattgtgtttac 3825574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 9259377 - 9259460
Alignment:
Q  147 agaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||||||||||||||||||||||| |   ||||||||||||||||||| | || || || |||||||||||| |||||    
T  9259377 agaggttgttgaccttctacatagagttcacagactcatgcatagcaatgtcatatatcctaagtccatgaatgttgtatttac 9259460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 4699973 - 4699810
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||| ||  |||||||| ||||| |||||| ||||| | |||||| | || ||| ||| || ||  ||| |||||||| |||||||||||    
T  4699973 gtggccaaacatgataag-cgtgttctcacaattaacatgtttttacaccatttg-tgttaacacttttggcttcatagcaccagaggctgttgaccttc 4699876  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    || ||| |||||||| || |||| |||||||| | ||||| | ||||| ||||||||||||||||||    
T  4699875 tatataaagttcaaaggt-catgaatagcaatattatgtcacctaggtccatgaatgttgtgtttac 4699810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 230
Target Start/End: Original strand, 8540384 - 8540548
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctac-- 166  Q
    ||||||| |||||| ||||||| |||||| ||||| |||||| |||| ||| ||||||| ||||   ||||||  | |||||||||||||| ||||||      
T  8540384 caaacattagaaaatgtgttctaacaatcgacatgtttttatgtcatctgcatttgacactttcaactttctaacatcagaggttgttgactttctacat 8540483  T
Q  167 -atagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
     ||| |||||||| | |||||| || ||||||||||| |  ||  ||||| ||||||||||||||    
T  8540484 aataaagttcaaagggtcatgcttaacaatgtcatgttttctattttcataaatgttgtgtttac 8540548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 10189643 - 10189581
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacatttt 131  Q
    |||||| |||||| | ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  10189643 caaacaagagaaagcatgttctgacaatcaacatgtttttatatcatttgcatttgacatttt 10189581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 6121045 - 6120947
Alignment:
Q  87 ttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatg 186  Q
    |||| |||||||||||| ||||||| ||| ||  ||||||| ||| ||||||||||||||| |||| ||||| || ||||| |||||||||||| |||||    
T  6121045 ttctcacaatcaacatgtttttatagcatgtg--tttgacacttttggttttctagtaccaaaggtcgttgatctcctacaaagagttcaaaaggtcatg 6120948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 222
Target Start/End: Complemental strand, 36004201 - 36004069
Alignment:
Q  90 tgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcat 189  Q
    |||||||||||||| ||||||| ||||| | ||||||||||| |  || |||  ||||||||||||||||| |||| | ||||||  || | ||||| ||    
T  36004201 tgacaatcaacatgtttttataccatttacatttgacatttttgacttcctatcaccagaggttgttgaccatctaaaaagagtttcaagggtcatggat 36004102  T
Q  190 agcaatgtcatgtctcataggttcatgaatgtt 222  Q
    | |||  | ||||||||||||| ||||||||||    
T  36004101 aacaacattatgtctcataggtccatgaatgtt 36004069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 37517440 - 37517375
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcgcttgtg 66  Q
    |||||||||||||||||||||||||| | |||||||| | |||||| |||||| ||||||| ||||    
T  37517440 gttagggatgtactttttgatatattcagacaggcggaaatatcagcgaagaaggaggcgcctgtg 37517375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 39435018 - 39434953
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcgcttgtg 66  Q
    |||||||||||||||||||||||||| |  |  |||||||||||||||||||| ||||||| ||||    
T  39435018 gttagggatgtactttttgatatattcaggcgagcgggagtatcagtgaagaaggaggcgcctgtg 39434953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 500578 - 500526
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaa 53  Q
    |||||||||||||||||||||||||| | ||| ||| ||||||||||||||||    
T  500578 gttagggatgtactttttgatatattcagacatgcgagagtatcagtgaagaa 500526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 42922140 - 42922192
Alignment:
Q  75 tgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgaca 127  Q
    |||||||||||||| |||||||||| ||||||||| ||||||||| |||||||    
T  42922140 tgagaaaacgtgttttgacaatcaaaatgcttttaaatcatttgcctttgaca 42922192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 24451105 - 24451062
Alignment:
Q  184 atgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 227  Q
    |||||||||||||||||||||| ||||| |||||||||||||||    
T  24451105 atgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtt 24451062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 121805 - 121889
Alignment:
Q  146 cagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||| |||||||| ||||||| | |||| ||||| ||||||||| ||||||||||||   || || |||| |||||||||||||    
T  121805 cagagattgttgacattctacacaaagtttaaaagatcatgcatatcaatgtcatgtcatctaagtccatggatgttgtgtttac 121889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 24125379 - 24125320
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcg 60  Q
    |||||||||||||||||||||||||||| || ||| |||| || ||||||| | ||||||    
T  24125379 gttagggatgtactttttgatatatttagacgggcaggagcattagtgaagtaggaggcg 24125320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 10556295 - 10556456
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||| ||||||||||||||| | |||||| |||||||||| |||||||| | |||  ||||||| ||  |  || |||| || ||||   |||||  |||    
T  10556295 gtggtcaaacatgagaaaacatattctgaaaatcaacatgtttttatataaattgtatttgacacttatgacttcctagcactagagacagttgatattc 10556394  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgt 226  Q
    | ||||||||||||    ||||||| | ||||||| || |||||| |||||||||||||||||    
T  10556395 tgcatagagttcaatgagtcatgcaaaacaatgtcgtggctcata-gttcatgaatgttgtgt 10556456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 178
Target Start/End: Complemental strand, 27715421 - 27715339
Alignment:
Q  96 tcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaa 178  Q
    |||||||||||||||| ||||| | ||||| |||||  | || |||||| || | ||||||||||||||| | ||||||||||    
T  27715421 tcaacatgcttttataccatttacgtttgatatttttagcttcctagtatcataagttgttgaccttctaaaaagagttcaaa 27715339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 42659212 - 42659166
Alignment:
Q  184 atgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||||| | ||||||  ||||||||||||||||||||||||    
T  42659212 atgcatagcaatattatgtcttctaggttcatgaatgttgtgtttac 42659166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 169
Target Start/End: Original strand, 4097373 - 4097450
Alignment:
Q  92 acaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 169  Q
    |||||||||||  |||||||| |||| | ||||| ||||| |  ||||||| | |||||||||||||| |||||||||    
T  4097373 acaatcaacatatttttatatgatttacatttgaaatttttgcctttctagcatcagaggttgttgactttctacata 4097450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 229
Target Start/End: Original strand, 5329680 - 5329769
Alignment:
Q  140 tagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttta 229  Q
    |||||| |||| ||||||||||||| ||| ||||||||| | ||||| | | |||| ||||||||| || ||  || |||||||||||||    
T  5329680 tagtactagagattgttgaccttctgcattgagttcaaagggtcatggacaacaatatcatgtctcctatgtctatcaatgttgtgttta 5329769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 179
Target Start/End: Original strand, 43421302 - 43421403
Alignment:
Q  78 gaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaa 177  Q
    |||||||||  | |||||| |||||| |||||||||||||   ||||||| ||| ||||||||| ||| | || || ||||||||||| | |||| ||||    
T  43421302 gaaaacgtgcaccgacaattaacatgtttttatatcatttttgtttgacacttttggttttctaatactaaagattattgaccttctaaaaagagctcaa 43421401  T
Q  178 aa 179  Q
    ||    
T  43421402 aa 43421403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 10950673 - 10950729
Alignment:
Q  76 gagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttc 132  Q
    ||||||||||||||| ||||| ||||| |||||||| ||||| | ||||||| ||||    
T  10950673 gagaaaacgtgttctaacaattaacatacttttataccatttacatttgacactttc 10950729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 10958678 - 10958734
Alignment:
Q  76 gagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttc 132  Q
    ||||||||||||||| ||||| ||||| |||||||| ||||| | ||||||| ||||    
T  10958678 gagaaaacgtgttctaacaattaacatacttttataccatttacatttgacactttc 10958734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 117; Significance: 9e-60; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 64 - 224
Target Start/End: Complemental strand, 6439 - 6279
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||| |||| |||| |||| |||||||| |||||||||||    
T  6439 gtggccaaacatgagaaagcgtgttctgacaatcaacatgcttctataccatttgcttttgacactttcagtttcctagcaccagaggctgttgaccttc 6340  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgt 224  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||    
T  6339 tacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgt 6279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 9e-57; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 64 - 227
Target Start/End: Complemental strand, 22347000 - 22346837
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    ||||||||| |||||||| |||||||||||||||||||||| |||||| | ||||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  22347000 gtggccaaatatgagaaagcgtgttctgacaatcaacatgcgtttataccttttgcttttgacactttcggtttcctagtagcagaggttgttgaccttc 22346901  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 227  Q
    |||| |||||||||||| |||||||||| ||||||||||||| |||||| ||||||||||||||    
T  22346900 tacacagagttcaaaaggtcatgcatagaaatgtcatgtctcctaggtttatgaatgttgtgtt 22346837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 65 - 223
Target Start/End: Complemental strand, 21473107 - 21472949
Alignment:
Q  65 tggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttct 164  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||| || | |||| |||| |||||||| ||||||||||||    
T  21473107 tggccaaacatgagaaagcgtgttctgacaatcaacatgtttttataccatttgcttttgacacttgcagtttcctagcaccagaggctgttgaccttct 21473008  T
Q  165 acatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttg 223  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  21473007 acatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttg 21472949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 64 - 205
Target Start/End: Original strand, 29169795 - 29169936
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||| ||||||||||||| ||||||    
T  29169795 gtggccaaacacgagaaaacgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcggtttcctagcaccagaggttgttaaccttc 29169894  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctc 205  Q
    ||||||||||||||||| ||||||| ||||||||||||||||    
T  29169895 tacatagagttcaaaaggtcatgcacagcaatgtcatgtctc 29169936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 64 - 225
Target Start/End: Original strand, 28041129 - 28041290
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    ||||||||||||||||||  |||||||||||||||||| | ||||||| ||||||||||||||| ||||||||| |||| ||||||||  ||||||||||    
T  28041129 gtggccaaacatgagaaagtgtgttctgacaatcaacaggtttttataccatttgcttttgacactttcggtttcctagcaccagaggcggttgaccttc 28041228  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtg 225  Q
    ||||||||||||||||| ||||||||||||||||||||||   || || |||||||||||||    
T  28041229 tacatagagttcaaaaggtcatgcatagcaatgtcatgtcctctaagtccatgaatgttgtg 28041290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 74 - 229
Target Start/End: Original strand, 20259809 - 20259964
Alignment:
Q  74 atgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagt 173  Q
    |||||||| ||||||||||||||||||||| ||||||| |||||  | |||||| |||||||||  ||| ||||||||||||||||||||||||||||||    
T  20259809 atgagaaagcgtgttctgacaatcaacatgtttttataccatttattgttgacactttcggtttcttagcaccagaggttgttgaccttctacatagagt 20259908  T
Q  174 tcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttta 229  Q
    ||||||| |||||||||| |||||||||||||||| ||| || |||||||||||||    
T  20259909 tcaaaaggtcatgcatagtaatgtcatgtctcataagttaataaatgttgtgttta 20259964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 64 - 230
Target Start/End: Original strand, 45659650 - 45659814
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||| |||  |||||||| |||||||||||    
T  45659650 gtggccaaacacgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcgatttcctatcaccagaggctgttgaccttc 45659749  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |  |||||||||||||| |||||||||||||||||||||||| |||||  || ||||| ||||||||    
T  45659750 t--atagagttcaaaagatcatgcatagcaatgtcatgtctcctaggtcaataaatgtcgtgtttac 45659814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 34644671 - 34644505
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||| ||||||||||||| | ||||||||||||| |||||| |||||||| |||||| || |||| | ||||||||||||||||||    
T  34644671 gtggccaaacatgagaaagcgtgttctgacaacctacatgcttttataccatttgtttttgacactttcggcttcctagcatcagaggttgttgaccttc 34644572  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||| |||| | | ||||||| |||||| ||||||| ||||| ||||||||||||||||||    
T  34644571 tacatagagtccaaagggttatgcatatcaatgttatgtctcctaggtccatgaatgttgtgtttac 34644505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 64 - 229
Target Start/End: Complemental strand, 2898810 - 2898642
Alignment:
Q  64 gtggccaaacatgagaaaa----cgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgac 159  Q
    ||||||||||||||||||     ||||||||||||||||| | | ||||||| ||||||||||||| | ||||||||| |||| ||||||||||||||||    
T  2898810 gtggccaaacatgagaaagtgagcgtgttctgacaatcaata-gtttttataccatttgcttttgatactttcggtttcctagcaccagaggttgttgac 2898712  T
Q  160 cttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttta 229  Q
    ||||||||||||||||||||| ||||||||| |||| |||||||||||| | ||||||||||||||||||    
T  2898711 cttctacatagagttcaaaagatcatgcataacaatatcatgtctcatacgatcatgaatgttgtgttta 2898642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 64 - 219
Target Start/End: Original strand, 31737325 - 31737480
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||| |||||| |||||||| ||||| |||||||| |  ||||| | ||||| |||    
T  31737325 gtggccaaacatgagaaaacatattctgacaatcaacatgcttttataccatttgtttttgacactttcgattttctagcattagaggctattgacattc 31737424  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaat 219  Q
    ||||||||||||||||| ||||||||| |||||| |||| || ||| | |||||||    
T  31737425 tacatagagttcaaaaggtcatgcatatcaatgttatgtttcctagatccatgaat 31737480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 2764584 - 2764418
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||  ||||| ||||||||| |||| | || |||| | ||||||||||||||||||    
T  2764584 gtggtcaaacatgagaaaacgtgttccgacaatcaacatgcttttatgccattttcttttgacactttcagcttcctagcatcagaggttgttgaccttc 2764485  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||| ||| |||| | | ||||| | |||||| ||||||| ||||| ||| ||||||||||||||    
T  2764484 tacataaagtccaaagggttatgcaaatcaatgttatgtctcttaggtccataaatgttgtgtttac 2764418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 91 - 227
Target Start/End: Original strand, 24177540 - 24177676
Alignment:
Q  91 gacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcata 190  Q
    ||||||||||||  ||||||| |||||| |||||||| ||||||||| |||| | |||||| |||| ||||||||||||||||||||||  |||||||||    
T  24177540 gacaatcaacatatttttataccatttgtttttgacagtttcggtttcctagcatcagaggctgtttaccttctacatagagttcaaaaagtcatgcata 24177639  T
Q  191 gcaatgtcatgtctcataggttcatgaatgttgtgtt 227  Q
    |||||||||| |||| ||||| |||||||||||||||    
T  24177640 gcaatgtcatatctcctaggtccatgaatgttgtgtt 24177676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 69 - 230
Target Start/End: Original strand, 4861996 - 4862157
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 168  Q
    ||||||||||||| ||| ||||||||| |||||| ||||||||  |||||||||||||| ||||| ||| |||  |||| | ||||||||||||||||||    
T  4861996 caaacatgagaaagcgtcttctgacaagcaacatacttttatacaatttgcttttgacactttcgatttcctaacaccaaaagttgttgaccttctacat 4862095  T
Q  169 agagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||| | ||||||||| |||||||| ||| | ||| | ||||||||||||| ||||    
T  4862096 agagttcaaagggtcatgcataacaatgtcacgtcccttagatccatgaatgttgtgattac 4862157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 230
Target Start/End: Complemental strand, 38731704 - 38731548
Alignment:
Q  74 atgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagt 173  Q
    |||||||| |||||||||||||||||||| ||||||||  |||||||||||| | ||| || ||  ||| ||||||||||||| ||||||||||||||||    
T  38731704 atgagaaagcgtgttctgacaatcaacatacttttatacaatttgcttttgaaacttttggcttcttagcaccagaggttgttaaccttctacatagagt 38731605  T
Q  174 tcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||| | ||||||| |  ||||||||| ||| ||||| ||||||| ||||||||||    
T  38731604 tcaaagggtcatgcacaataatgtcatgactcctaggtccatgaatattgtgtttac 38731548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 64 - 151
Target Start/End: Complemental strand, 19035552 - 19035465
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagagg 151  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| || |||||| |||| ||||||||    
T  19035552 gtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttacttttgacacttacggtttcctagcaccagagg 19035465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 64 - 178
Target Start/End: Original strand, 50314626 - 50314740
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||| ||||||||| ||||| |||||| |||||||||||||||||||| ||||| |||||||||||||   ||| |||  || ||| ||||||||| |||    
T  50314626 gtggtcaaacatgacaaaacttgttctcacaatcaacatgcttttataccatttacttttgacattttttatttcctaacacaagatgttgttgactttc 50314725  T
Q  164 tacatagagttcaaa 178  Q
    |||||||||||||||    
T  50314726 tacatagagttcaaa 50314740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 197
Target Start/End: Complemental strand, 42919962 - 42919832
Alignment:
Q  66 ggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttcta 165  Q
    |||||||||||||||| |||||||| |||||||||||| |||||| |||| ||||||||||| ||| | ||| | || |  |||| ||||| ||||||||    
T  42919962 ggccaaacatgagaaa-cgtgttctcacaatcaacatgtttttatgtcatctgcttttgacacttttgatttccaagcagtagagattgttaaccttcta 42919864  T
Q  166 catagagttcaaaagttcatgcatagcaatgt 197  Q
    ||||||||| ||| | ||||||| ||||||||    
T  42919863 catagagtttaaagggtcatgcagagcaatgt 42919832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 230
Target Start/End: Original strand, 18616162 - 18616321
Alignment:
Q  71 aacatgagaaaacgtgttctgacaatcaacatgc-ttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 169  Q
    ||||||||||||||||||| || ||||||||||  ||||||| |||||| |||| ||| |||||  ||||||| ||| |||| ||||||| |||||||||    
T  18616162 aacatgagaaaacgtgttc-gataatcaacatgtgttttataccatttgtttttaacactttcgactttctagcacccgaggctgttgacattctacata 18616260  T
Q  170 gagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
     | |||||| | |||||||||||||| | |||| || ||||| ||| ||| |||| |||||    
T  18616261 taattcaaagggtcatgcatagcaatattatgtatcttaggtccataaatattgtatttac 18616321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 98 - 230
Target Start/End: Complemental strand, 47459753 - 47459621
Alignment:
Q  98 aacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgt 197  Q
    |||||| ||||||| ||||||||||||| | ||| || || |||||| ||||||  |||||||||||||||||||| |||| |   ||||||||||||||    
T  47459753 aacatgtttttataccatttgcttttgatacttttggcttcctagtatcagaggcagttgaccttctacatagagtccaaaggaatatgcatagcaatgt 47459654  T
Q  198 catgtctcataggttcatgaatgttgtgtttac 230  Q
     ||||||| || ||  || ||||||||||||||    
T  47459653 tatgtctcctaagtctataaatgttgtgtttac 47459621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 227
Target Start/End: Complemental strand, 7213335 - 7213192
Alignment:
Q  85 tgttctgacaatcaacatgctttt-atatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttc 183  Q
    |||||||| ||| |||||| |||| |||||||||  |||||||| ||||||||| |||| |  ||||  |||||| ||||| |||| |||||||||  ||    
T  7213335 tgttctgataattaacatgttttttatatcatttatttttgacactttcggtttcctagcattagagactgttgagcttctgcataaagttcaaaatgtc 7213236  T
Q  184 atgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 227  Q
    |||||||  ||||||||||||  ||||| |||||||||||||||    
T  7213235 atgcataataatgtcatgtcttctaggtccatgaatgttgtgtt 7213192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 229
Target Start/End: Original strand, 50161419 - 50161591
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgctttt---gacattttcggttttctagtaccagaggttgttgacc 160  Q
    |||| ||||||||||||| |||||||| ||||||||||||||||||||||||||  ||||    | | ||| || |  |||| |||| |||||| ||||     
T  50161419 gtggacaaacatgagaaagcgtgttctcacaatcaacatgcttttatatcatttttttttttatatacttttggctccctagcaccaaaggttgatgaca 50161518  T
Q  161 ttctacatagagttcaaaagttcatgcatagcaatgtcatgt-----ctcataggttcatgaatgttgtgttta 229  Q
    |||||||||||||||||| | ||||||| ||||||| |||||     | ||||||| |||||||||||||||||    
T  50161519 ttctacatagagttcaaaggatcatgcagagcaatg-catgttacgacacataggtccatgaatgttgtgttta 50161591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 211
Target Start/End: Original strand, 37932239 - 37932366
Alignment:
Q  84 gtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttc 183  Q
    ||||||||||||||||| || ||||| || |||   |||| ||| |||||| || |||| |||||||| ||||||| ||||| || ||||| |||  |||    
T  37932239 gtgttctgacaatcaacgtgtttttacattattatttttttacactttcggcttcctagcaccagaggatgttgacattctatattgagtttaaacattc 37932338  T
Q  184 atgcatagcaatgtcatgtctcataggt 211  Q
     ||||||| |||||||||||||||||||    
T  37932339 gtgcatagtaatgtcatgtctcataggt 37932366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 169
Target Start/End: Complemental strand, 16500139 - 16500034
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    ||||||||| || ||||||| |||||| ||||| ||||||| ||||||  |||||||||||||| ||| |  || |||| |  ||||| |||||||||||    
T  16500139 gtggccaaatataagaaaacatgttctaacaattaacatgcctttatactatttgcttttgacacttttgacttcctagcattagaggctgttgaccttc 16500040  T
Q  164 tacata 169  Q
    ||||||    
T  16500039 tacata 16500034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 131
Target Start/End: Complemental strand, 15584974 - 15584912
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacatttt 131  Q
    |||||||  |||||||| ||||||||||||||||| || |||| ||||||| |||||||||||    
T  15584974 caaacattggaaaacgtattctgacaatcaacatgtttctataccatttgcgtttgacatttt 15584912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 138
Target Start/End: Complemental strand, 36486991 - 36486917
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggtttt 138  Q
    |||| |||| |||||||| |||||| |||||||||| ||  |||||||| |||||||||||||| ||| ||||||    
T  36486991 gtggtcaaatatgagaaagcgtgttttgacaatcaatatctttttatataatttgcttttgacacttttggtttt 36486917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 34644916 - 34644852
Alignment:
Q  2 ttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcgcttgtg 66  Q
    ||||||||||||||||||||||||| |    ||||||||||||||||||||| || |||| ||||    
T  34644916 ttagggatgtactttttgatatattcaggagggcgggagtatcagtgaagaaggaagcgcgtgtg 34644852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 35387747 - 35387799
Alignment:
Q  153 tgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctc 205  Q
    |||||| ||||||||||||||||||| |  |||||||| ||||||||||||||    
T  35387747 tgttgatcttctacatagagttcaaagggacatgcatatcaatgtcatgtctc 35387799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 868513 - 868560
Alignment:
Q  172 gttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaat 219  Q
    ||||||||| |||||||||||||||||||||||| || || |||||||    
T  868513 gttcaaaaggtcatgcatagcaatgtcatgtctcctaagtccatgaat 868560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 28040883 - 28040942
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcg 60  Q
    ||||||||||||| |||||||||||||| ||  ||| || ||||||||||||| ||||||    
T  28040883 gttagggatgtaccttttgatatatttagacgtgcgagaatatcagtgaagaaggaggcg 28040942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 29169553 - 29169615
Alignment:
Q  4 agggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcgcttgtg 66  Q
    ||||||||| ||||||||||||| | || |||  |||||||||||||||| ||||||| ||||    
T  29169553 agggatgtattttttgatatattcagacgggcatgagtatcagtgaagaaggaggcgcctgtg 29169615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 229
Target Start/End: Original strand, 35550100 - 35550242
Alignment:
Q  87 ttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatg 186  Q
    ||||||||||||||||  || ||||| |||| | ||||||| | | || || |||| || | ||||||||| ||||||| | |||||| ||| | |||||    
T  35550100 ttctgacaatcaacataattctatattatttacgtttgacactcttggcttcctagcactataggttgttggccttctaaaaagagtttaaaggatcatg 35550199  T
Q  187 catagcaatgtcatgtctcataggttcatgaatgttgtgttta 229  Q
     ||| |||||| ||||| | || ||| || |||||||||||||    
T  35550200 tataacaatgttatgtcccttatgtttattaatgttgtgttta 35550242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 23043982 - 23043929
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcattt 117  Q
    ||||||||| ||||||||||  || || |||||||||||||||||||| |||||    
T  23043982 gtggccaaatatgagaaaacaagtactcacaatcaacatgcttttataccattt 23043929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 33355 - 33189
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    ||||| |||||||||||| ||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||| |||  ||||||||||||||||||||    
T  33355 gtggctaaacatgagaaagcgtgttctgacaatcaacatgtttttataccatttacttttgacattttcggtttcctaacaccagaggttgttgaccttc 33256  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||||||||||| |||||||||||||| | ||||||| ||||| |||||| || ||||||||    
T  33255 tacatagagttcaaaaggtcatgcatagcaattttatgtctcctaggtccatgaacgtcgtgtttac 33189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 2e-51; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 959685 - 959520
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    ||||| || |||||||||||||||||||||||||||||||  |||||| |||||| |||||||||||||||||| |||| ||||||||||||||||||||    
T  959685 gtggctaaccatgagaaaacgtgttctgacaatcaacatgtctttataccatttgtttttgacattttcggtttcctagcaccagaggttgttgaccttc 959586  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||| || |||||||||| ||||||||||||||||  |||||| ||||| ||||||||||||||||||    
T  959585 tacgta-agttcaaaaggtcatgcatagcaatgttgtgtctcctaggtccatgaatgttgtgtttac 959520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 64 - 230
Target Start/End: Original strand, 4206598 - 4206764
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    ||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||| || |||| ||||||||||||||||||||    
T  4206598 gtggctaaacatgagaaagcgtgttctgacaatgaacatgcttttatatcatttgcttttgacactttcgggttcctagcaccagaggttgttgaccttc 4206697  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||||||||||| ||||||||  |||||||||||| | |||||  |||||| | ||||||||    
T  4206698 tacatagagttcaaaaggtcatgcatgacaatgtcatgtcacctaggtcaatgaatatagtgtttac 4206764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 64 - 203
Target Start/End: Original strand, 4165924 - 4166063
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||| ||||||||||||||||||||    
T  4165924 gtggctaaacatgagaaagcgtgttctgacaatcaacatgcttttatatcatttgcttttgacactttcgggttcctagcaccagaggttgttgaccttc 4166023  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtc 203  Q
    ||||||||||| ||||| ||||||||  ||||||||||||    
T  4166024 tacatagagtttaaaaggtcatgcatgacaatgtcatgtc 4166063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 45684 - 45819
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 168  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||| |||||||||  ||| |||||||| ||||||||||||||||    
T  45684 caaacatgagaaaacgtgttctgacaatcaacatgcttttattccatttgtttttgacactttcggtttcttagcaccagaggctgttgaccttctacat 45783  T
Q  169 agagttcaaaagttcatgcatagcaatgtcatgtct 204  Q
    |||||||||||| |||||||||||||||| ||||||    
T  45784 agagttcaaaaggtcatgcatagcaatgttatgtct 45819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 64 - 230
Target Start/End: Original strand, 17249307 - 17249473
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||| ||| || || |||| | ||||||  ||||||||||    
T  17249307 gtggccaaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgcttttgacacttttggcttcctagcatcagaggcagttgaccttc 17249406  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||| |||| | | ||| |||||||||| ||||||| || |||||||||||||||||||||    
T  17249407 tacatagagtccaaaggattatgtatagcaatgttatgtctcctaagttcatgaatgttgtgtttac 17249473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 230
Target Start/End: Complemental strand, 34304597 - 34304435
Alignment:
Q  68 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 167  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||| || || |||| | |||| | |||||||||||||||    
T  34304597 ccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttgggcttcctagcatcagatgatgttgaccttctaca 34304498  T
Q  168 tagagttcaaa-agttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||| |||| |||| |||||||||||| |||||||||||||||  ||||||||||| |||||    
T  34304497 tagagtccaaagagtt-atgcatagcaatatcatgtctcataggtctatgaatgttgtatttac 34304435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 230
Target Start/End: Original strand, 33220713 - 33220879
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||| |||||  |||||||||||||||||||||| ||||||||||||||| |||||| || |||| | | ||||||||||||||||    
T  33220713 gtggccaaacatgagaaagcgtgtgttgacaatcaacatgcttttataccatttgcttttgacactttcggcttcctagcatccgaggttgttgaccttc 33220812  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||| ||| |||| | | ||||||||||||||  |||||  ||||| ||||||||||| ||||||    
T  33220813 tacatatagtccaaagggttatgcatagcaatgttgtgtcttctaggtccatgaatgttgcgtttac 33220879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 67 - 230
Target Start/End: Original strand, 29338084 - 29338247
Alignment:
Q  67 gccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctac 166  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||| ||  |  || |||| ||||||| | |||||||||||||    
T  29338084 gccaaacatgagaaaacgtgttctaacaatcaacatgctcttataccatttgcttttgacacttctgacttcctagcaccagagatcgttgaccttctac 29338183  T
Q  167 atagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||  ||||||| | ||||||| | |||||||||| ||| ||||| ||||||||||||||||||    
T  29338184 atatggttcaaagggtcatgcacatcaatgtcatgactcctaggtccatgaatgttgtgtttac 29338247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 28626036 - 28625870
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgctttt-atatcatttgcttttgacattttcggttttctagtaccagaggttgttgacctt 162  Q
    ||||| ||||| |||||||||||||||||||||||||||  |||| ||| |||||| |||| ||| ||||  ||| |||| ||||||||||||||| |||    
T  28626036 gtggctaaacacgagaaaacgtgttctgacaatcaacattttttttataccatttgttttttacactttcaatttcctagcaccagaggttgttgagctt 28625937  T
Q  163 ctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||| |||||||||| ||||||||| | ||||||| ||||||||||  |||||||||||||||||    
T  28625936 ctacataaagttcaaaaggtcatgcataac-atgtcatatctcataggtctatgaatgttgtgtttac 28625870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 64 - 230
Target Start/End: Original strand, 357719 - 357884
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| | |||| |||| ||| ||| | ||| |||  |  |||||||| ||||||||    
T  357719 gtggccaaacatgagaaagcgtgttctgacaatgaacatgcttttataacctttgtttttaacacttttg-tttcctaacattagaggttgatgaccttc 357817  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||| |||| | | | |||||||||||| || |||| ||||| ||||||||||||||||||    
T  357818 tacatagagtccaaatgattaagcatagcaatgttatctctcctaggtccatgaatgttgtgtttac 357884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 68 - 230
Target Start/End: Original strand, 34554283 - 34554444
Alignment:
Q  68 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 167  Q
    |||||||||||||| |||||||||| |||||| ||| ||||||| ||||| |||||||||  ||||| || |||| |||||| | | ||||| |||||||    
T  34554283 ccaaacatgagaaagcgtgttctgataatcaagatgtttttataccatttacttttgacacattcggcttcctagcaccagatgctattgactttctaca 34554382  T
Q  168 tagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||| ||||| ||||| |||||||| ||||||||| || | |||||||| ||||||||||    
T  34554383 tagagtttaaaaggtcatgtatagcaatatcatgtctcgtaag-tcatgaattttgtgtttac 34554444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 65 - 201
Target Start/End: Complemental strand, 34415540 - 34415404
Alignment:
Q  65 tggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttct 164  Q
    |||| ||||||||||||  |||||||||||||||||||||||||||  |||||| |||||||| ||| ||||| |||  |||| | |  |||||||||||    
T  34415540 tggcgaaacatgagaaagtgtgttctgacaatcaacatgcttttatgccatttgtttttgacactttaggtttcctaacaccaaatgcagttgaccttct 34415441  T
Q  165 acatagagttcaaaagttcatgcatagcaatgtcatg 201  Q
    | |||||||||||| | ||||||||||||||||||||    
T  34415440 atatagagttcaaatggtcatgcatagcaatgtcatg 34415404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 230
Target Start/End: Complemental strand, 24016437 - 24016276
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 168  Q
    ||||||||||||| | |||||| |||||||||||| ||||||| |||||||| |||| | ||| ||||| |||| |||||| ||||||||  || |||||    
T  24016437 caaacatgagaaagcttgttctcacaatcaacatgtttttataccatttgctattgatagttttggtttcctagcaccagatgttgttgattttttacat 24016338  T
Q  169 agagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||| | ||||||| |  ||||||||||||| || || ||| ||| || |||||||    
T  24016337 agagttcaaagggtcatgcacaagaatgtcatgtctcctaagtacataaatattatgtttac 24016276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 153 - 230
Target Start/End: Complemental strand, 32115734 - 32115657
Alignment:
Q  153 tgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||||||||| |||||||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||    
T  32115734 tgttgaccttctacaaagagttcaaaaggtcatgcataacaatgtcatgtctcctaggtccatgaatgttgtgtttac 32115657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 70 - 228
Target Start/End: Complemental strand, 3715016 - 3714858
Alignment:
Q  70 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 169  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||| || |||||||| ||| |  ||  ||| |||| ||  | |||| ||||||||||    
T  3715016 aaacatgagaaaacgtgttctcacaattaacatgtttttatatcatctgtttttgacacttttgacttcttagcaccaaagactcttgatcttctacata 3714917  T
Q  170 gagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttt 228  Q
    ||||| |||   ||||||| | |||||||||||||||||  | ||||||||||||||||    
T  3714916 gagtttaaagaatcatgcacaacaatgtcatgtctcataaatccatgaatgttgtgttt 3714858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 32116040 - 32115975
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcgcttgtg 66  Q
    |||||||||||||||||||||||||||  || ||||||||||||||||||||||||||||| ||||    
T  32116040 gttagggatgtactttttgatatattttgacgggcgggagtatcagtgaagaaagaggcgcatgtg 32115975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 188
Target Start/End: Original strand, 26225597 - 26225705
Alignment:
Q  80 aaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaa 179  Q
    |||| |||||||||||||||||||||||| || || ||   ||||||||||| || ||||||| || ||| ||||||| ||||| ||||||||||||||     
T  26225597 aaacatgttctgacaatcaacatgcttttttaccagttatgtttgacatttttggctttctagcactagatgttgttggccttcaacatagagttcaaag 26225696  T
Q  180 gttcatgca 188  Q
    | |||||||    
T  26225697 gctcatgca 26225705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 357473 - 357538
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcgcttgtg 66  Q
    |||||||||||||||||||||||||| |  | ||||||||||||||||||||| ||||| ||||||    
T  357473 gttagggatgtactttttgatatattcaggcgggcgggagtatcagtgaagaaggaggcccttgtg 357538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 230
Target Start/End: Original strand, 13398205 - 13398350
Alignment:
Q  85 tgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttca 184  Q
    ||||| ||||||||||||  |||||||  |||| ||||||| ||||| |  || |||  | |||| ||||||||| |||||||||||||||||||| | |    
T  13398205 tgttccgacaatcaacatatttttatactatttacttttgatatttttgacttcctaacatcagaagttgttgacattctacatagagttcaaaagatga 13398304  T
Q  185 tgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||| |||||||| | ||  ||| | ||| ||||||||||||||    
T  13398305 tgcataacaatgtcacgacttctagatgcataaatgttgtgtttac 13398350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 3137367 - 3137415
Alignment:
Q  182 tcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  3137367 tcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtttac 3137415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 31703561 - 31703632
Alignment:
Q  154 gttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtg 225  Q
    ||||||||||||||||||||| ||| | ||||||| | |||| ||||||||||| ||||||||||| |||||    
T  31703561 gttgaccttctacatagagtttaaatgatcatgcacatcaatatcatgtctcattggttcatgaatattgtg 31703632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 34168973 - 34168913
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttg 124  Q
    |||||||||||||||||| | ||||  ||||| ||||||||||||||| ||||||||||||    
T  34168973 gtggccaaacatgagaaagcatgtttggacaagcaacatgcttttataccatttgcttttg 34168913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 217
Target Start/End: Complemental strand, 22986015 - 22985873
Alignment:
Q  75 tgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagtt 174  Q
    ||||||||| |||| || |||||||| | ||||||||  | |||  ||||||||||| || |  |||  | || |||||||| |||||||| |||||||     
T  22986015 tgagaaaacatgttatggcaatcaacgtacttttatactacttgtgtttgacatttttggctacctaacatcataggttgtttaccttctatatagagtc 22985916  T
Q  175 caaaagttcatgcatagcaatgtcatgtctcataggttcatga 217  Q
    |||||| |||| |||||| |||| || |||| |||||||||||    
T  22985915 caaaaggtcatacatagccatgttatatctcttaggttcatga 22985873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 217
Target Start/End: Original strand, 23802379 - 23802521
Alignment:
Q  75 tgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagtt 174  Q
    ||||||||| |||| || |||||||| | ||||||||  | |||  ||||||||||| || |  |||  | || |||||||| |||||||| |||||||     
T  23802379 tgagaaaacatgttatggcaatcaacgtacttttatactacttgtgtttgacatttttggctacctaacatcataggttgtttaccttctatatagagtc 23802478  T
Q  175 caaaagttcatgcatagcaatgtcatgtctcataggttcatga 217  Q
    |||||| |||| |||||| |||| || |||| |||||||||||    
T  23802479 caaaaggtcatacatagccatgttatatctcttaggttcatga 23802521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 45425 - 45484
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcg 60  Q
    ||||||||||||||||||||||||||   || ||||||| ||||||| ||||| ||||||    
T  45425 gttagggatgtactttttgatatattctgacgggcgggaatatcagttaagaaggaggcg 45484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 4206352 - 4206410
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggc 59  Q
    |||||||||||||||||||||||||| | ||  | |||| ||||||||||||| |||||    
T  4206352 gttagggatgtactttttgatatattcagacgtgtgggaatatcagtgaagaaggaggc 4206410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 164
Target Start/End: Complemental strand, 6225177 - 6225077
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||| |||||||||||||   |||| ||||||||||||||||| ||| |||||||  ||||||| ||| |  ||||||  |||||| | | |||||||||    
T  6225177 gtggtcaaacatgagaaattttgttgtgacaatcaacatgcttatatgtcatttgtgtttgacacttttgcctttctatcaccagatgctcttgaccttc 6225078  T
Q  164 t 164  Q
    |    
T  6225077 t 6225077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 28543480 - 28543412
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttc 132  Q
    |||||||||||||||||| |||||| ||| |||||  ||||| |||||  ||||| |||||||| ||||    
T  28543480 gtggccaaacatgagaaatcgtgttttgaaaatcactatgctcttatactatttgattttgacactttc 28543412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 65 - 230
Target Start/End: Complemental strand, 103209 - 103045
Alignment:
Q  65 tggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttct 164  Q
    |||||||||| |||||| ||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||| |||| |||||||| ||||||||||||    
T  103209 tggccaaacacgagaaagcgtgt-ctgacaatcaacatgcttttataccatttgcttttgacactttcggtttcctagcaccagaggctgttgaccttct 103111  T
Q  165 acatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||| ||| ||||||| ||||||||| ||||||| |||||| ||||| ||||||||||||||||||    
T  103110 acatcgagctcaaaaggtcatgcataacaatgtcgtgtctcctaggtccatgaatgttgtgtttac 103045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 5e-49; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 64 - 230
Target Start/End: Original strand, 32269799 - 32269965
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||| |||||||||||||  |||||||||||||||||| ||||||||| ||||||||||||| | ||||| ||| |||| || |||||||||||||||||    
T  32269799 gtggtcaaacatgagaaagtgtgttctgacaatcaacacgcttttataccatttgcttttgatactttcgatttcctagcactagaggttgttgaccttc 32269898  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    | |||  |||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  32269899 tgcatgaagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtttac 32269965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 42921802 - 42921637
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||| |||| |||||||||||||| |||||    
T  42921802 gtggtcaaacacgagaaaacgtgttctgacaatcaacatgcttttataccatttgcttatgacactttcggtttcctagcaccagaggttgttggccttc 42921703  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||||||| ||| ||||||||| |||||||||||||| || || ||| ||| ||||||||||    
T  42921702 tacatagagttcagaaggtcatgcataacaatgtcatgtctcctaagtccat-aatattgtgtttac 42921637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 64 - 229
Target Start/End: Original strand, 37873640 - 37873805
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||| ||| || || |||| ||||||||||||||||||||    
T  37873640 gtggccaaacatgagaaagcgtgttctgacaatcaacatgtttttataccatttgcttttgacacttttggcttcctagcaccagaggttgttgaccttc 37873739  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttta 229  Q
    ||||||||||||||| | ||||||| | |||||||||| ||  |||||  ||||||||||||||||    
T  37873740 tacatagagttcaaagggtcatgcagaacaatgtcatgacttctaggtctatgaatgttgtgttta 37873805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 64 - 230
Target Start/End: Original strand, 13166912 - 13167078
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||| || |||| | |||||  |||||||||||    
T  13166912 gtggctaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcggcttcctagcatcagagactgttgaccttc 13167011  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||| |||| | | |||||||||||||  ||||||| ||||| ||||||||||| ||||||    
T  13167012 tacatagagtccaaagggttatgcatagcaatggtatgtctcctaggtccatgaatgttgggtttac 13167078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 64 - 229
Target Start/End: Original strand, 15292028 - 15292192
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||  ||||| |||| ||| |||  ||||||||| || ||||||| |||| ||||    
T  15292028 gtggccaaacatgagaaaacgtgttctgacaatcaacatgtttttatacaatttgttttttacacttttagttttctagcactagaggttattgatcttc 15292127  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttta 229  Q
    |||| | |||||||||| ||||||||||||||||||  |||| ||||| |||||||||||||||||    
T  15292128 taca-aaagttcaaaaggtcatgcatagcaatgtcacatctcctaggtccatgaatgttgtgttta 15292192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 230
Target Start/End: Original strand, 33692057 - 33692222
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||||||| |||||| ||  ||| | |||||  |||||||||||    
T  33692057 gtggccaaacatgacaaaacgtgttatgacaatcaacatgcttttgtaccatttgcttttgacactttcggcttcttagcatcagagactgttgaccttc 33692156  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||| || |||| | | ||||||| |||||| |||||||||||||||||||||||| |||||||    
T  33692157 tacatagtgtccaaagggt-atgcataacaatgttatgtctcataggttcatgaatgttctgtttac 33692222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 35310553 - 35310387
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||| ||| ||||||||||| |||||| || || | | |||||| |||| ||||||    
T  35310553 gtggccaaacatgagaaagcatgttctgacaatcaacatgcttttataccatctgcttttgacactttcggcttcctggcatcagaggctgttaaccttc 35310454  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||| |||| | |  |||||| |||||| ||||||| ||||| ||||||||||||||||||    
T  35310453 tacatagagtccaaagggttttgcatatcaatgttatgtctcctaggtccatgaatgttgtgtttac 35310387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 94 - 230
Target Start/End: Original strand, 22188687 - 22188823
Alignment:
Q  94 aatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagca 193  Q
    |||||||||| |||||||  ||||| |||||||| ||||| |||| ||| |||||||| |||||||||||||||||||||||||||| ||||||||| ||    
T  22188687 aatcaacatgattttatactatttgtttttgacactttcgattttttagcaccagaggctgttgaccttctacatagagttcaaaaggtcatgcataaca 22188786  T
Q  194 atgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    || ||||||||| ||| ||||||||||||||||||||    
T  22188787 atatcatgtctcctagattcatgaatgttgtgtttac 22188823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 64 - 230
Target Start/End: Original strand, 25663034 - 25663200
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||| |||||||||| |||||||||| ||||||| ||||||||||||||| |||| | || |||| | |||| |||||||| ||||    
T  25663034 gtggccaaacatgagaaagcgtgttctgataatcaacatgtttttataccatttgcttttgacactttcagcttcctagcatcagaagttgttgatcttc 25663133  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||| |||| | | ||||||| |||||| ||||| | ||||| ||||||||||| ||||||    
T  25663134 tacatagagtccaaagggttatgcatatcaatgttatgtcccctaggtccatgaatgttgagtttac 25663200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 230
Target Start/End: Complemental strand, 38875739 - 38875578
Alignment:
Q  68 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 167  Q
    ||||||||||||||  |||||||||||||||||||| |||| || |||||| |||||||| |||| | || |||| |||||||| || |||||||||||     
T  38875739 ccaaacatgagaaagtgtgttctgacaatcaacatgtttttgtaccatttgtttttgacactttcagcttcctagcaccagaggctgctgaccttctacg 38875640  T
Q  168 tagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||||||| ||||||||| ||||||| |||||| |||||  ||| |||||||||||||    
T  38875639 tagagttcaaaaggtcatgcataacaatgtcttgtctcctaggtcaatg-atgttgtgtttac 38875578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 64 - 178
Target Start/End: Complemental strand, 43129639 - 43129525
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||| ||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||| |||  |||||| ||| |||||||||    
T  43129639 gtggtcaaacatgagaaaacgtgttctgacaatcaacatgtttttctaccatttgcttttgacattttcggtttcctaacaccagatgtttttgaccttc 43129540  T
Q  164 tacatagagttcaaa 178  Q
    |||| ||||||||||    
T  43129539 tacagagagttcaaa 43129525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 230
Target Start/End: Complemental strand, 34335440 - 34335276
Alignment:
Q  66 ggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttcta 165  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| |||||| |||||||| |||||  |||||   |||||||| |||||||||||||    
T  34335440 ggccaaacatgagaaagcgtgtcctgacaatcaacatgcttttataccatttgtttttgacactttcgactttctgacaccagaggctgttgaccttcta 34335341  T
Q  166 catagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||||||  | |||||| || |||| ||||||||| |||   ||| ||| ||||||||||    
T  34335340 catagagttcaacggatcatgcgtaacaatctcatgtctcctagacccataaatattgtgtttac 34335276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 85 - 230
Target Start/End: Complemental strand, 430686 - 430541
Alignment:
Q  85 tgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttca 184  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||| |  ||  ||| | ||||||  |||||||||||||||||| | |||| | | |    
T  430686 tgttctgacaatcaacatgcttttataccatttgcttttgacacttttgtcttcatagcatcagaggcagttgaccttctacatagattccaaagggtta 430587  T
Q  185 tgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||| ||||| ||||||| ||||| ||||||||||||||||||    
T  430586 tgcatagtaatgttatgtctcctaggtccatgaatgttgtgtttac 430541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 224
Target Start/End: Original strand, 26212585 - 26212745
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||| ||| ||||||| ||||||||||||||||| |||||| |||| ||  |||| ||||  ||| |||||||| | || ||||||    
T  26212585 gtggccaaacatgagaaagcgtattctgacgatcaacatgcttttataccatttgttttttaccctttcagtttcttagcaccagaggctattaaccttc 26212684  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgt 224  Q
    ||||||||||||||||  ||||| || ||||| | ||||||| || || ||||||||||||    
T  26212685 tacatagagttcaaaatgtcatgtatggcaatattatgtctcctaagtccatgaatgttgt 26212745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 27336798 - 27336634
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||| ||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||| ||  || || |||| | ||||||  ||||||||||    
T  27336798 gtggtcaaacatgagaaatcgtgttctgacaatcaacatacttttataccatttgcttttgacacttgtggcttcctagcatcagaggcagttgaccttc 27336699  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||   ||| | | ||| |||||||||| ||||||| || || |||||||||||| |||||    
T  27336698 tacatagag--aaaatggttatgtatagcaatgttatgtctcctaagtccatgaatgttgtttttac 27336634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 71 - 211
Target Start/End: Complemental strand, 14423776 - 14423643
Alignment:
Q  71 aacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatag 170  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||    | |||| | |||||| ||||||||||||||||||    
T  14423776 aacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttc----tcctagcatcagaggctgttgaccttctacatag 14423681  T
Q  171 agttcaaaagttcatgcatagcaatgtcatgtctcataggt 211  Q
    ||||   ||| | || |||| |||||||||||||| |||||    
T  14423680 agtt---aaggtaattcataacaatgtcatgtctcttaggt 14423643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 87 - 200
Target Start/End: Original strand, 14723269 - 14723382
Alignment:
Q  87 ttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatg 186  Q
    |||||||||||||||||||||||||||||||| |||| ||| ||| |||||| ||| | ||||||||||||||||| ||| || |||||||||  |||||    
T  14723269 ttctgacaatcaacatgcttttatatcatttgttttttacacttttggttttttagcatcagaggttgttgaccttatacttaaagttcaaaatgtcatg 14723368  T
Q  187 catagcaatgtcat 200  Q
    |||| |||| ||||    
T  14723369 cataacaatatcat 14723382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 69 - 204
Target Start/End: Complemental strand, 8100652 - 8100517
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 168  Q
    |||||||||||||||||||| |||||||  ||||||||||||| |||||| || ||||| ||||   || ||   || |||||||||||||||||||| |    
T  8100652 caaacatgagaaaacgtgttgtgacaatttacatgcttttataccatttgtttgtgacactttcaacttccttccactagaggttgttgaccttctacgt 8100553  T
Q  169 agagttcaaaagttcatgcatagcaatgtcatgtct 204  Q
    |||||| |||  |||||||||| |||||||||||||    
T  8100552 agagtttaaagattcatgcatatcaatgtcatgtct 8100517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 162
Target Start/End: Complemental strand, 35456056 - 35455963
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgacctt 162  Q
    ||||||||||||| |||||||| |||||||||||||||||||| | ||||||||||||| ||| || || |||| |||||||| ||||||||||    
T  35456056 caaacatgagaaagcgtgttctaacaatcaacatgcttttataccttttgcttttgacaattttggcttcctagcaccagaggatgttgacctt 35455963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 97 - 204
Target Start/End: Original strand, 41343473 - 41343581
Alignment:
Q  97 caacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat-agagttcaaaagttcatgcatagcaat 195  Q
    |||| |||||||||| |||||| ||| ||||| ||||||||||||| |||||||||||||| |||||||||| | |||||||| | ||||||||| ||||    
T  41343473 caacgtgcttttataccatttgttttcgacatattcggttttctagcaccagaggttgttggccttctacataatagttcaaaggatcatgcataacaat 41343572  T
Q  196 gtcatgtct 204  Q
     ||||||||    
T  41343573 atcatgtct 41343581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 2566194 - 2566263
Alignment:
Q  161 ttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||| | ||| ||||||||||||||    
T  2566194 ttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctagatccatcaatgttgtgtttac 2566263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 43115464 - 43115583
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 168  Q
    |||| |||||||| |||||| |||||||||||||||||| ||| ||||||||||||||| ||  |  ||  ||  ||||||| ||||||||||||||| |    
T  43115464 caaatatgagaaagcgtgttttgacaatcaacatgctttcatagcatttgcttttgacacttctgacttcgtaacaccagagattgttgaccttctacgt 43115563  T
Q  169 agagttcaaaagttcatgca 188  Q
    |||||| ||| | |||||||    
T  43115564 agagtttaaatgatcatgca 43115583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 19260396 - 19260243
Alignment:
Q  75 tgagaaaacgtgttctgacaatcaacatgcttttatatcatttgct-tttgacattttcggttttctagtaccagaggttgttgaccttctacatagagt 173  Q
    ||||||| |||||||  |||||||||||| |||||||||||||  | ||||| | |   |||||  |||||| | ||||| |||||||||||| ||||||    
T  19260396 tgagaaagcgtgttcgaacaatcaacatgtttttatatcattttgtgtttgatagt---ggtttcttagtactaaaggttattgaccttctacttagagt 19260300  T
Q  174 tcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||| | |||| |||| |||||| |||||| |||  |||||||||||| |||||||    
T  19260299 tcaaagggtcatacataacaatgtaatgtcttatatattcatgaatgttatgtttac 19260243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 142
Target Start/End: Original strand, 32230513 - 32230587
Alignment:
Q  68 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctag 142  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| ||| ||| || |||| ||| ||||||||||    
T  32230513 ccaaacatgagaaaatgtgttctgacaatcaacaagcttttataccatctgcgttcgacacttttggttttctag 32230587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 137
Target Start/End: Original strand, 3114165 - 3114238
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttt 137  Q
    |||||||||||||||||| | |||||||||| |||||||| ||||||| |||||| |||||||| ||| |||||    
T  3114165 gtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttttggttt 3114238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 38446517 - 38446452
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcgcttgtg 66  Q
    |||||||||||||||||||||||||| |  | ||||||||||||||||||||| ||||||| ||||    
T  38446517 gttagggatgtactttttgatatattcaggcgggcgggagtatcagtgaagaaggaggcgcatgtg 38446452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 90 - 204
Target Start/End: Complemental strand, 7716261 - 7716146
Alignment:
Q  90 tgacaatcaacatgcttttatatcatttgc-ttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgca 188  Q
    ||||| |||| ||| || |||| ||||||| |||||||| ||| |||||||||| ||||||||||||||  ||| |||||| |||||||| | | |||||    
T  7716261 tgacattcaatatgtttctataccatttgcgttttgacacttttggttttctagcaccagaggttgttggtcttttacataaagttcaaaggattatgca 7716162  T
Q  189 tagcaatgtcatgtct 204  Q
    || |||| ||||||||    
T  7716161 taacaatatcatgtct 7716146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 69 - 116
Target Start/End: Complemental strand, 8859016 - 8858969
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatt 116  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  8859016 caaacatgagaaagcgtgttctgacaatcaacatgtttttatatcatt 8858969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 14436602 - 14436542
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgaca 127  Q
    |||||||||||||| ||||||||||||   |||||||||| |||||||||||||| ||||||||    
T  14436602 gtggccaaacatgaaaaaacgtgttct---aatcaacatgtttttatatcatttgtttttgaca 14436542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 23023591 - 23023534
Alignment:
Q  173 ttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||| ||||||||| |||||||||||||| |||||  |||||||||||||||||    
T  23023591 ttcaaaaggtcatgcatatcaatgtcatgtctcctaggtcgatgaatgttgtgtttac 23023534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 178
Target Start/End: Complemental strand, 27294528 - 27294429
Alignment:
Q  75 tgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagtt 174  Q
    |||| ||||||||| |||||||||||  |||||||||  |||||| ||  ||||||  |  ||||||| |||||||||||||||||||||||||| ||||    
T  27294528 tgaggaaacgtgttgtgacaatcaac--gcttttatactatttgcgttgcacattt--gtctttctagcaccagaggttgttgaccttctacatatagtt 27294433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 433643 - 433583
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcgc 61  Q
    |||||||||||||| ||||||||||| | || ||||||| |||| ||||||||||||||||    
T  433643 gttagggatgtactatttgatatattcagacgggcgggaatatcggtgaagaaagaggcgc 433583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 7143805 - 7143757
Alignment:
Q  70 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttg 118  Q
    ||||||||||||||||||| | |||||||||||| |||||||| |||||    
T  7143805 aaacatgagaaaacgtgttttaacaatcaacatgtttttatatgatttg 7143757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 15810069 - 15809991
Alignment:
Q  147 agaggttgttgaccttctacatagagttcaaaa-gttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 227  Q
    |||||||||||||||   | ||||||||||||| | ||||| |||||||||||||||||| ||||  ||||||||| |||||    
T  15810069 agaggttgttgacct---atatagagttcaaaatggtcatgtatagcaatgtcatgtctcctaggcccatgaatgtcgtgtt 15809991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 227
Target Start/End: Complemental strand, 15833138 - 15833004
Alignment:
Q  90 tgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcat 189  Q
    |||||||||| ||  ||||||  ||||| | ||||||| ||| |  || |||| |||||| ||||||||   |||| |||||||||||| | ||||| ||    
T  15833138 tgacaatcaagatatttttattccatttacgtttgacacttttgacttcctagcaccagatgttgttga---tctatatagagttcaaatggtcatgtat 15833042  T
Q  190 agcaatgtcatgtctcataggttcatgaatgttgtgtt 227  Q
    | |||||||| ||||| ||| ||||||||||| |||||    
T  15833041 aacaatgtcacgtctcctagattcatgaatgtcgtgtt 15833004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 202
Target Start/End: Original strand, 23423960 - 23424011
Alignment:
Q  151 gttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgt 202  Q
    ||||||||||||||||||||| |||||| | |||| ||| ||||||||||||    
T  23423960 gttgttgaccttctacatagatttcaaaggatcattcattgcaatgtcatgt 23424011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 3113921 - 3113979
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggc 59  Q
    ||||||||||| |||||||||||||| |    ||||||||||||||||||||| |||||    
T  3113921 gttagggatgtcctttttgatatattcagctgggcgggagtatcagtgaagaaggaggc 3113979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 9829361 - 9829407
Alignment:
Q  71 aacatgagaaaacgtgttctgacaatcaacatgcttttatatcattt 117  Q
    ||||||| |||| ||||| |||||||||||||||||||||| |||||    
T  9829361 aacatgataaaatgtgttttgacaatcaacatgcttttataccattt 9829407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 13166669 - 13166731
Alignment:
Q  4 agggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcgcttgtg 66  Q
    ||||||||||||||||||||||| |  | ||||| ||||||||||||||| || |||| ||||    
T  13166669 agggatgtactttttgatatattcaggcgggcggaagtatcagtgaagaaggaagcgcctgtg 13166731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 6534319 - 6534384
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcgcttgtg 66  Q
    |||| |||| ||||||||||||||||||    ||||||||||||| ||||||||||| ||| ||||    
T  6534319 gttaaggatatactttttgatatatttaggtgggcgggagtatcaatgaagaaagagacgcatgtg 6534384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 230
Target Start/End: Complemental strand, 24113571 - 24113514
Alignment:
Q  173 ttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||| | ||||||||| |||||||||||||  ||||| |||||||||||| |||||    
T  24113571 ttcaaatgatcatgcataacaatgtcatgtcttctaggtccatgaatgttgtttttac 24113514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 26212339 - 26212403
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcgcttgtg 66  Q
    |||||||||||||||||||||||||| | |  || |||| ||||||||||||| ||||||| ||||    
T  26212339 gttagggatgtactttttgatatattcaga-gggtgggaatatcagtgaagaaggaggcgcctgtg 26212403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 8087547 - 8087591
Alignment:
Q  136 tttctagtaccagaggttgttgaccttctacatagagttcaaaag 180  Q
    |||||| || ||| |||||||||||||||||| ||||||||||||    
T  8087547 tttctattatcagcggttgttgaccttctacaaagagttcaaaag 8087591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 5e-49; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 68 - 230
Target Start/End: Original strand, 600698 - 600860
Alignment:
Q  68 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 167  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||| || ||||||||| |||  ||||||||||||||||||||||||    
T  600698 ccaaacatgagaaaacgtgttctaacaattaacatgcttttataccatttgcttttgtcactttcggtttcctaacaccagaggttgttgaccttctaca 600797  T
Q  168 tagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||||||| ||||| ||| | |||||||||||| ||||| ||| |||| |||||||||    
T  600798 tagagttcaaaaggtcatgtataactatgtcatgtctcctaggtccattaatgctgtgtttac 600860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 69 - 230
Target Start/End: Original strand, 56462113 - 56462274
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 168  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||| |||||| ||| |||| ||| ||||| |||| |||||||||||||||||||||||||    
T  56462113 caaacatgataaagcgtgttctgacaatcaacatgtttttataccatttgttttagacacttttggtttcctagcaccagaggttgttgaccttctacat 56462212  T
Q  169 agagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||| | ||||||||  |||||||||||||| || || ||| ||||||||||||||    
T  56462213 agagttcaaaggatcatgcatgacaatgtcatgtctcctaagtccataaatgttgtgtttac 56462274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 25504395 - 25504235
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacat 168  Q
    |||||||||||||||||||||| |||||| ||||| ||||||| | ||||||||||||||||| ||||| |||| || ||||  |||||||||| || ||    
T  25504395 caaacatgagaaaacgtgttctaacaatcgacatgtttttataccgtttgcttttgacatttttggtttcctagcactagagactgttgaccttttaaat 25504296  T
Q  169 agagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgttta 229  Q
    |||||| ||||| |||||||||| ||||||||||||||||||| ||||||| |||||||||    
T  25504295 agagtttaaaaggtcatgcatagtaatgtcatgtctcataggtccatgaatattgtgttta 25504235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 67 - 227
Target Start/End: Complemental strand, 53170609 - 53170454
Alignment:
Q  67 gccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctac 166  Q
    ||||||||||||||| |||||||||||| |||||||||||       |||||||||||||| ||||||||| |||| |||||||| ||||||||||||||    
T  53170609 gccaaacatgagaaagcgtgttctgacagtcaacatgcttg------atttgcttttgacactttcggtttgctagcaccagaggctgttgaccttctac 53170516  T
Q  167 atagagttcaaaagttcatgcatagcaatgtcatgtctc--ataggttcatgaatgttgtgtt 227  Q
    |||||||||||||| ||||||||||||||||||||||||  ||||| ||||||||||||||||    
T  53170515 atagagttcaaaaggtcatgcatagcaatgtcatgtctcctatagg-tcatgaatgttgtgtt 53170454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 64 - 227
Target Start/End: Original strand, 34107696 - 34107861
Alignment:
Q  64 gtggccaaacatgagaaaacgtgt--tctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgacct 161  Q
    ||||||||||||||||||||||||  || || |||||||||| ||||||| |||||| |||||||| ||||| ||| |||| |||||||| |||||||||    
T  34107696 gtggccaaacatgagaaaacgtgtgttcagataatcaacatgtttttataccatttgtttttgacactttcgatttcctagcaccagaggctgttgacct 34107795  T
Q  162 tctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 227  Q
    ||||||||||||||||||  ||||||||| |||||| ||||||| ||| | |||||||||||||||    
T  34107796 tctacatagagttcaaaaagtcatgcataacaatgttatgtctcctagatccatgaatgttgtgtt 34107861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 53619691 - 53619525
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||| |  || |||| | ||||||  ||||||||||    
T  53619691 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttataccatttgtttttgacacttttgacttcctagcatcagaggcagttgaccttc 53619592  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||||  ||| | | ||||||| |||||| ||||||| ||||| ||||||||||||||||||    
T  53619591 tacatagagtctaaagggttatgcataacaatgttatgtctcttaggtccatgaatgttgtgtttac 53619525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 65 - 230
Target Start/End: Complemental strand, 132489 - 132324
Alignment:
Q  65 tggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttct 164  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||| |||||| |||| ||| ||||||||| ||| || ||||| |||||||| ||||    
T  132489 tggcaaaacatgagaaatcgtgttctgacaatcaacatgcttttataccatttgttttttacactttcggtttcctaatatcagagattgttgacattct 132390  T
Q  165 acatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||| |||||| ||| | ||| ||||| |||||||||||||  ||||||||||| ||||||||||||    
T  132389 acacagagtttaaagggtcaagcataacaatgtcatgtcttttaggttcatgattgttgtgtttac 132324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 26521593 - 26521428
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||||||||| ||||||  ||| ||| ||||| |||| |||||||| |||||||||||    
T  26521593 gtggctaaacatgaaaaaacgtgttatgacaatcaacatgcttttatatcatatgctttcaacacttttggtttcctagcaccagaggctgttgaccttc 26521494  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||| |||||||| | |||||| |||||||||||||| || ||||  |||| |||||||||||||    
T  26521493 tacatacagttcaaagggtcatgcgtagcaatgtcatgtatcctaggcccatg-atgttgtgtttac 26521428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 83 - 230
Target Start/End: Original strand, 7536592 - 7536739
Alignment:
Q  83 cgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagtt 182  Q
    |||||| |||||||||||||| |||||||  ||||| |||||||| |||| |||| |||| ||||||||||||||||||||||||||||||||||| | |    
T  7536592 cgtgttttgacaatcaacatgtttttatacaatttgtttttgacaatttcagtttcctagcaccagaggttgttgaccttctacatagagttcaaatgat 7536691  T
Q  183 catgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    | ||||||||||| | ||||||| ||| | |||||||||| |||||||    
T  7536692 cgtgcatagcaattttatgtctcgtagatccatgaatgttatgtttac 7536739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 64 - 230
Target Start/End: Original strand, 50000927 - 50001094
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgctttta-tatcatttgcttttgacattttcggttttctagtaccagaggttgttgacctt 162  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||| ||  |||||||||||||| ||| || ||||||| | ||||||  |||||||||    
T  50000927 gtggtcaaacatgagaaagcgtgttctgacaatcaacatgcttttaatacaatttgcttttgacacttttggctttctagcatcagaggcagttgacctt 50001026  T
Q  163 ctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||| ||| |||| | | |||||||||||||| ||||||| ||| | ||| ||||||||||||||    
T  50001027 ctacatatagtccaaagggttatgcatagcaatgttatgtctcctagatccataaatgttgtgtttac 50001094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 70 - 227
Target Start/End: Original strand, 6865828 - 6865984
Alignment:
Q  70 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 169  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||  | ||  ||| || ||| |||||| ||||| ||||||    
T  6865828 aaacacgagaaaacgtgttctgactatcaacatgcttttatatcatttgcttttgacactttgagcttcatagcactagatgttgttaaccttttacata 6865927  T
Q  170 gagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 227  Q
    ||||||||| | | |||||||||||||||||||||| || | ||||||||||| ||||    
T  6865928 gagttcaaagggtaatgcatagcaatgtcatgtctccta-gatcatgaatgttctgtt 6865984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 77 - 186
Target Start/End: Original strand, 50483211 - 50483320
Alignment:
Q  77 agaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttca 176  Q
    ||||| ||| ||||||||||||||||| ||||||| |||||||||| |||| ||||||||| |||| |||||||||||||||||||||||||||||||||    
T  50483211 agaaagcgtcttctgacaatcaacatgattttataccatttgctttcgacactttcggtttcctagcaccagaggttgttgaccttctacatagagttca 50483310  T
Q  177 aaagttcatg 186  Q
    |||| |||||    
T  50483311 aaaggtcatg 50483320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 88 - 230
Target Start/End: Complemental strand, 3330077 - 3329935
Alignment:
Q  88 tctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgc 187  Q
    ||||||||||||||||||||||||  |||||||||||||| ||| || || |||| | ||||||  |||||||||||||||||||| |||| | | ||||    
T  3330077 tctgacaatcaacatgcttttatactatttgcttttgacacttttggcttcctagcatcagaggcagttgaccttctacatagagtccaaagggttatgc 3329978  T
Q  188 atagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||| ||||||| ||||| |||||||| |||||||||    
T  3329977 atagcaatgttatgtctcctaggtccatgaatgctgtgtttac 3329935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 64 - 227
Target Start/End: Original strand, 30940741 - 30940897
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||| ||||| ||| |||| ||| |||| ||      |||    
T  30940741 gtggtcaaacatgagaaagcgtgttctgacaatcaacatgcttttatacca-ttgcttttgacactttcgatttcctagcacctgaggctg------ttc 30940833  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 227  Q
    ||||||||||||||||| ||||||||| ||||||||| | || |||||  ||||||||||||||    
T  30940834 tacatagagttcaaaaggtcatgcataacaatgtcatatatcctaggtctatgaatgttgtgtt 30940897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 230
Target Start/End: Complemental strand, 16955490 - 16955399
Alignment:
Q  139 ctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||  ||||||||||||||||||    
T  16955490 ctagcaccagaggttgctgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggcccatgaatgttgtgtttac 16955399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 64 - 230
Target Start/End: Original strand, 55933464 - 55933628
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    ||||||||||||||||||   |||||| |||||||||||||||||||| ||||||||||||||| |||||  || |||| | |  |||||||||||||||    
T  55933464 gtggccaaacatgagaaagtttgttctaacaatcaacatgcttttataccatttgcttttgacactttcgacttcctagcatc--aggttgttgaccttc 55933561  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||| |||| | | || |||| |||| | ||||||| ||||| | ||||||||||||||||    
T  55933562 tacatagagtccaaagggttatacataacaatattatgtctcctaggtccgtgaatgttgtgtttac 55933628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 100 - 230
Target Start/End: Original strand, 38535607 - 38535737
Alignment:
Q  100 catgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtca 199  Q
    |||||| ||||| ||||||| ||||||| ||| |  || |||| ||||||||||||| ||| |||||||||||||||||   ||||||||||||||||||    
T  38535607 catgctcttataccatttgcatttgacacttttgacttcctagcaccagaggttgttcaccctctacatagagttcaaagagtcatgcatagcaatgtca 38535706  T
Q  200 tgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||| |||||| |||| |||||||||||||    
T  38535707 tgtcttataggtccatggatgttgtgtttac 38535737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 218
Target Start/End: Original strand, 46440911 - 46441045
Alignment:
Q  84 gtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttc 183  Q
    ||||||| ||||| |||| | ||||||||||||||||||||||| |||||| || |||| | |||| | || |||||||||||||||||| |||| | |     
T  46440911 gtgttctaacaattaacacgtttttatatcatttgcttttgacactttcggcttcctagcatcagaagctgctgaccttctacatagagtccaaagggtt 46441010  T
Q  184 atgcatagcaatgtcatgtctcataggttcatgaa 218  Q
     ||||||||||||  ||||||||||||||||||||    
T  46441011 gtgcatagcaatgctatgtctcataggttcatgaa 46441045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 4419286 - 4419202
Alignment:
Q  146 cagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    ||||||||||||||||||||||||||||||||| | | ||||||| |||||| ||||||| ||||| ||||||||||||||||||    
T  4419286 cagaggttgttgaccttctacatagagttcaaagggttatgcataacaatgttatgtctcctaggtccatgaatgttgtgtttac 4419202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 63 - 230
Target Start/End: Original strand, 54190857 - 54191019
Alignment:
Q  63 tgtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgacctt 162  Q
    ||||| ||||||||||||||| | ||||||||||  ||||| ||||||     |||||||||||| ||| |  ||||||||| |||||||||||||||||    
T  54190857 tgtggtcaaacatgagaaaacatattctgacaatttacatgtttttat-----ttgcttttgacacttttgactttctagtatcagaggttgttgacctt 54190951  T
Q  163 ctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    | |||||||||||||| |  |||||||| |||||||||| ||| || || ||| ||| |||| |||||    
T  54190952 ccacatagagttcaaagggccatgcataacaatgtcatgactcttaagtccataaatattgtatttac 54191019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 11562983 - 11562893
Alignment:
Q  84 gtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagtt 174  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||  ||  ||||||||||| ||||||||| |||||    
T  11562983 gtgttcggacaatcaacatgcttttatatcatttactttagacattttcggttttctaacactcgaggttgttgatcttctacattgagtt 11562893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 64 - 230
Target Start/End: Complemental strand, 23255809 - 23255652
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||| |||||| |||||||         ||  ||| | || |||  ||||||||||    
T  23255809 gtggccaaacatgagaaagcgtgttctgacaattaacatgcttttataccatttgtttttgac---------ttcttagcatcataggcagttgaccttc 23255719  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||| |||| | | ||||||| |||||| ||||||| || || ||||||| ||||||||||    
T  23255718 tacatagagtccaaagggttatgcataacaatgttatgtctcctaagtccatgaatattgtgtttac 23255652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 197
Target Start/End: Original strand, 43849349 - 43849483
Alignment:
Q  63 tgtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgacctt 162  Q
    |||||||||||| |||||| ||||||| || || |||||||||||||||  |||||  ||||||| ||| || || |||| |||| ||||||| || |||    
T  43849349 tgtggccaaacacgagaaagcgtgttcagataaccaacatgcttttatactatttgtgtttgacacttttggcttcctagaaccaaaggttgtggatctt 43849448  T
Q  163 ctacatagagttcaaaagttcatgcatagcaatgt 197  Q
    ||||| |||||||||| | ||||||||| ||||||    
T  43849449 ctacaaagagttcaaatggtcatgcataacaatgt 43849483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 70 - 230
Target Start/End: Original strand, 46391323 - 46391480
Alignment:
Q  70 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 169  Q
    ||||| |||||||| |||||| |||  ||||||| ||||||| |||| |||| | ||||||||| ||| |||  |  |||||||||||||||||||||||    
T  46391323 aaacacgagaaaacatgttctcacagccaacatgtttttataccatt-gcttgtaacattttcgatttcctatcagtagaggttgttgaccttctacata 46391421  T
Q  170 gagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
     |||||||||| ||||||  | |||||||||||||| ||  | |||||||||||| |||||    
T  46391422 aagttcaaaagatcatgc--aacaatgtcatgtctcctaaatccatgaatgttgtatttac 46391480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 69 - 230
Target Start/End: Original strand, 48656917 - 48657083
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagt-accagaggttgttgacctt----c 163  Q
    |||||||||||||  ||||| || ||||||| ||| ||||||| |||||| |||||||| |||||  ||  |||  |  ||||||||||||||||    |    
T  48656917 caaacatgagaaagtgtgttatgtcaatcaaaatgtttttataccatttgtttttgacactttcgacttcttagcgattagaggttgttgaccttccttc 48657016  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||| |||| | | |||||||||||||| |||||||||||||  |||||||||||||||||    
T  48657017 tacatagagtccaaatgattatgcatagcaatgttatgtctcataggtctatgaatgttgtgtttac 48657083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 68 - 205
Target Start/End: Original strand, 50462952 - 50463089
Alignment:
Q  68 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctaca 167  Q
    ||||||||||||||  || ||| ||||||||||||||||| ||| ||||||||||||||| ||| | ||| ||   |||||||  ||||||||||||||     
T  50462952 ccaaacatgagaaagtgtcttccgacaatcaacatgctttcataccatttgcttttgacacttttgatttccttacaccagagactgttgaccttctacg 50463051  T
Q  168 tagagttcaaaagttcatgcatagcaatgtcatgtctc 205  Q
    ||||||| ||| |  |||||||| ||||| ||||||||    
T  50463052 tagagtttaaagggccatgcataacaatgccatgtctc 50463089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 87 - 187
Target Start/End: Complemental strand, 53098503 - 53098403
Alignment:
Q  87 ttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatg 186  Q
    ||||||||||||||||| ||||  | | ||| ||||||||||||| ||||| |||| | ||||||||||| ||||||||||||||||||||| | |||||    
T  53098503 ttctgacaatcaacatgtttttgaaccgtttccttttgacatttttggtttcctagcatcagaggttgttaaccttctacatagagttcaaatggtcatg 53098404  T
Q  187 c 187  Q
    |    
T  53098403 c 53098403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 105 - 191
Target Start/End: Original strand, 747812 - 747898
Alignment:
Q  105 ttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatag 191  Q
    ||||||| ||||||||||||| ||||  |||||  || || ||||||||||||||||||||||||||||| ||||| ||||||||||    
T  747812 ttttataccatttgcttttgatatttctggtttcttaatatcagaggttgttgaccttctacatagagtttaaaaggtcatgcatag 747898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 64 - 178
Target Start/End: Complemental strand, 31847192 - 31847078
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||| ||||||||||||| | |||||||||| |||||||| |||| || ||||||||||||||| ||| || || |||| | |||| |  ||||||||||    
T  31847192 gtggtcaaacatgagaaaccatgttctgacagtcaacatgtttttttaccatttgcttttgacacttttggcttcctagcatcagaagcggttgaccttc 31847093  T
Q  164 tacatagagttcaaa 178  Q
    |||||||||| ||||    
T  31847092 tacatagagtccaaa 31847078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 173
Target Start/End: Original strand, 12918374 - 12918483
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||| ||||||| ||||| |||||||||||||||||||  ||||||||  |||| ||||||||| |||||  || |||| | ||||| ||||||||||||    
T  12918374 gtggtcaaacataagaaatcgtgttctgacaatcaacacacttttatactatttacttttgacactttcgacttcctagcatcagagattgttgaccttc 12918473  T
Q  164 tacatagagt 173  Q
    || |||||||    
T  12918474 tagatagagt 12918483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 118 - 230
Target Start/End: Complemental strand, 39001448 - 39001336
Alignment:
Q  118 gcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatga 217  Q
    |||||||||| ||| || || |||| | ||||||  |||||||||||||||||||| |||| | | ||||||| ||||||  |||||| ||||| |||||    
T  39001448 gcttttgacacttttggcttcctaggatcagaggcagttgaccttctacatagagtccaaaggattatgcataacaatgttgtgtctcctaggtccatga 39001349  T
Q  218 atgttgtgtttac 230  Q
    |||||||||||||    
T  39001348 atgttgtgtttac 39001336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 16957643 - 16957568
Alignment:
Q  68 ccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagt 143  Q
    ||||||||||||||  ||| ||||| ||||||||||||| |||| ||||||||||||||| |||| ||||||||||    
T  16957643 ccaaacatgagaaagtgtgctctgataatcaacatgcttatataccatttgcttttgacactttcagttttctagt 16957568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 42455692 - 42455775
Alignment:
Q  147 agaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||| ||||||||||||||||||||| | ||||| ||| ||||||||||| |  ||||| |||||||||||| |||||    
T  42455692 agaggttgttaaccttctacatagagttcaaatgatcatggataacaatgtcatgttttctaggtccatgaatgttgtttttac 42455775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 191
Target Start/End: Original strand, 712636 - 712722
Alignment:
Q  105 ttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatag 191  Q
    ||||||| ||||||||||||| ||||  |||||  || || |||||||||||| |||||||||||||||| ||||| ||||||||||    
T  712636 ttttataccatttgcttttgatatttctggtttcttaatatcagaggttgttgtccttctacatagagtttaaaaggtcatgcatag 712722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 26521839 - 26521774
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcgcttgtg 66  Q
    |||||||||||||||||||||||||||| || | || |||||||| ||||||| ||||||| ||||    
T  26521839 gttagggatgtactttttgatatatttagacggacgagagtatcattgaagaatgaggcgcatgtg 26521774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 226
Target Start/End: Complemental strand, 8738203 - 8738148
Alignment:
Q  171 agttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgt 226  Q
    |||||||| | |||||||||  ||||||||||||| ||||||||||||||||||||    
T  8738203 agttcaaaggctcatgcataaaaatgtcatgtctcttaggttcatgaatgttgtgt 8738148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 229
Target Start/End: Complemental strand, 28740011 - 28739845
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgc-ttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgacctt 162  Q
    ||||||||||| ||||||  ||||| ||||| | ||||||  ||||||| |||||   ||||||| |||||  || |||  |||| | ||||||||||||    
T  28740011 gtggccaaacacgagaaattgtgttgtgacagttaacatgtgttttataccatttatgtttgacactttcgacttcctaacaccacaagttgttgacctt 28739912  T
Q  163 ctacatagagttcaaaagttca-tgcatagcaatgtcatgtctcataggttcatgaatgttgtgttta 229  Q
     ||||||||||||||  || || |||||| |||||| ||||||| ||||| ||| |||||||||||||    
T  28739911 ttacatagagttcaac-gtgcaatgcataacaatgttatgtctcctaggtccataaatgttgtgttta 28739845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 219
Target Start/End: Original strand, 45386063 - 45386218
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||| ||||||| ||||| |||||||||||||||||  |  ||||||| ||||| | ||||| | ||| || ||||||| || ||||||  || ||||||    
T  45386063 gtggtcaaacataagaaagcgtgttctgacaatcaatttctttttataccatttacatttgaaacttttggctttctagcacaagaggtcattaaccttc 45386162  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaat 219  Q
    ||| || | |||||| | ||||||||| ||||||  |||||| || || |||||||    
T  45386163 tacctaaaattcaaagggtcatgcataacaatgttgtgtctcttaagtccatgaat 45386218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 3330301 - 3330243
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggc 59  Q
    |||||||||||||||||||||||||| |  |  |||||||||||||||||||| |||||    
T  3330301 gttagggatgtactttttgatatattcaggcgagcgggagtatcagtgaagaaggaggc 3330243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 45760841 - 45760903
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacatttt 131  Q
    |||| |||||||| |||||| |||||||||||||  ||||||||| ||||| |||||||||||    
T  45760841 caaagatgagaaagcgtgttttgacaatcaacatatttttatatcttttgcatttgacatttt 45760903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 122
Target Start/End: Complemental strand, 12053513 - 12053460
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttt 122  Q
    ||||||||||||| |||||||| |||||||| | | ||||||||||||||||||    
T  12053513 caaacatgagaaatcgtgttctaacaatcaaaacgtttttatatcatttgcttt 12053460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 50464387 - 50464464
Alignment:
Q  153 tgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||||||| ||||||| ||| | ||||||||| ||||||||||||||  |  |  |||||||||||||||||    
T  50464387 tgttgaccttctacgtagagtttaaagggtcatgcataacaatgtcatgtctcccaaatatatgaatgttgtgtttac 50464464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 16957886 - 16957822
Alignment:
Q  2 ttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcgcttgtg 66  Q
    ||||||||||||||||||||||||| | || ||| ||||||||||||| | | ||||||| ||||    
T  16957886 ttagggatgtactttttgatatattcagacgggcaggagtatcagtgaggtaggaggcgcctgtg 16957822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 18981659 - 18981706
Alignment:
Q  182 tcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  18981659 tcatgcatagtaatgtcatgtctc-taggtccatgaatgttgtgtttac 18981706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 24720024 - 24719976
Alignment:
Q  79 aaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgaca 127  Q
    |||||| |||||||||||||||||| ||||||||||||||  |||||||    
T  24720024 aaaacgcgttctgacaatcaacatgtttttatatcatttgtgtttgaca 24719976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 28883158 - 28883206
Alignment:
Q  69 caaacatgagaaaacgtgttctgacaatcaacatgcttttatatcattt 117  Q
    |||||||||||||||||||||  |||| ||||||| |||||||||||||    
T  28883158 caaacatgagaaaacgtgttcgaacaaccaacatgtttttatatcattt 28883206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 230
Target Start/End: Complemental strand, 34213636 - 34213559
Alignment:
Q  152 ttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||||||||||||| |||||||||||| | |||||| || ||||||  | |||| ||| | ||||||||||||||||||    
T  34213636 ttgttgaccttctagatagagttcaaagggtcatgcctaacaatgt-gtctctcctagttccatgaatgttgtgtttac 34213559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 34952522 - 34952457
Alignment:
Q  1 gttagggatgtactttttgatatatttaaacaggcgggagtatcagtgaagaaagaggcgcttgtg 66  Q
    |||||||||||  ||||||||||||| |  | |||| |||||||||||||||| ||||||| ||||    
T  34952522 gttagggatgtcatttttgatatattaaggcgggcgagagtatcagtgaagaaggaggcgcatgtg 34952457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 227
Target Start/End: Original strand, 32312796 - 32312876
Alignment:
Q  147 agaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtt 227  Q
    |||||| ||||| ||| |||| |||||||||||| ||||||||| ||||||  |||||  ||| |  ||||||||||||||    
T  32312796 agaggtcgttgatcttatacaaagagttcaaaaggtcatgcataacaatgtagtgtcttctagatctatgaatgttgtgtt 32312876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 70 - 230
Target Start/End: Complemental strand, 7701 - 7542
Alignment:
Q  70 aaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacata 169  Q
    |||||||||||| |||||||| |||||||||||| ||||| | ||||||||||||||| |||| |||| ||||  |||||| ||||||||||| | ||||    
T  7701 aaacatgagaaagcgtgttctcacaatcaacatgattttaaaccatttgcttttgacactttcagtttcctagctccagagattgttgaccttttgcata 7602  T
Q  170 gagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    | ||||||||| |||||||||  ||||||||||||||||||| |||||||||| |||||||    
T  7601 gcgttcaaaaggtcatgcata-taatgtcatgtctcataggtccatgaatgttatgtttac 7542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1768 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold1768
Description:

Target: scaffold1768; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 64 - 230
Target Start/End: Original strand, 186 - 352
Alignment:
Q  64 gtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttc 163  Q
    |||||||||||||||| |  | ||| |||| ||||||||||||||||| ||||||  ||||||| ||| ||||||||||||||| |||||||||||||||    
T  186 gtggccaaacatgagacagtgggttatgaccatcaacatgcttttataccatttgtgtttgacacttttggttttctagtaccaaaggttgttgaccttc 285  T
Q  164 tacatagagttcaaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    | |||| |||||||||  |||| ||||||||||||||||||| ||| |  ||||| |||||||||||    
T  286 tgcataaagttcaaaaagtcatacatagcaatgtcatgtctcctagatcgatgaacgttgtgtttac 352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 65 - 201
Target Start/End: Complemental strand, 10468 - 10329
Alignment:
Q  65 tggccaaacatgagaaaacgtgttctgacaatcaa----catgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgacc 160  Q
    ||||||||||||| ||  |||||||||||||||||    |||||||||||| ||||||||||||||| ||  || || |||| |||||||||||||||||    
T  10468 tggccaaacatgataatgcgtgttctgacaatcaatcaacatgcttttataccatttgcttttgacacttgtggcttcctagcaccagaggttgttgacc 10369  T
Q  161 ttctacatagagttcaaaagttcatgcatagcaatgtcatg 201  Q
    ||||| |||||||| ||| |  |||||||| ||||||||||    
T  10368 ttcta-atagagttgaaagggccatgcataacaatgtcatg 10329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 197
Target Start/End: Original strand, 18369 - 18499
Alignment:
Q  66 ggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttcta 165  Q
    |||||||||||||||| |||||||| |||||||||||| |||||| |||| ||||||||||| ||| | ||| | || |  |||| ||||| ||||||||    
T  18369 ggccaaacatgagaaa-cgtgttctcacaatcaacatgtttttatgtcatctgcttttgacacttttgatttccaagcagtagagattgttaaccttcta 18467  T
Q  166 catagagttcaaaagttcatgcatagcaatgt 197  Q
    ||||||||| ||| | ||||||| ||||||||    
T  18468 catagagtttaaagggtcatgcagagcaatgt 18499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 49505 - 49354
Alignment:
Q  75 tgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagtt 174  Q
    ||||||| |||||||||||||||||| |||||||||| ||||||||||||||| |||||  ||  ||  |||| ||||||  |    || ||||||||||    
T  49505 tgagaaatcgtgttctgacaatcaacgtgcttttataccatttgcttttgacactttcgacttcttaacaccaaaggttgagg----tcaacatagagtt 49410  T
Q  175 caaaagttcatgcatagcaatgtcatgtctcataggttcatgaatgttgtgtttac 230  Q
    |||| | ||||||||| |||||||||||||| || || ||||||||| || |||||    
T  49409 caaaggatcatgcataacaatgtcatgtctcttatgtccatgaatgtagtatttac 49354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0493 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0493
Description:

Target: scaffold0493; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 71 - 178
Target Start/End: Original strand, 8525 - 8632
Alignment:
Q  71 aacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcggttttctagtaccagaggttgttgaccttctacatag 170  Q
    ||||||||||||| ||||||||||||||||||| ||||||| ||||||| ||| ||| ||| ||||| |||| || |||||||||  | ||||| || ||    
T  8525 aacatgagaaaacatgttctgacaatcaacatgtttttataccatttgcgtttaacacttttggtttcctagcactagaggttgtgaatcttctgcaaag 8624  T
Q  171 agttcaaa 178  Q
    ||||||||    
T  8625 agttcaaa 8632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 133
Target Start/End: Original strand, 47542 - 47610
Alignment:
Q  65 tggccaaacatgagaaaacgtgttctgacaatcaacatgcttttatatcatttgcttttgacattttcg 133  Q
    |||||||||||||||||| ||||||||||| | |||||  ||||||| ||||||||||| ||| |||||    
T  47542 tggccaaacatgagaaaatgtgttctgacagttaacatatttttataccatttgcttttaacactttcg 47610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 16238 - 16192
Alignment:
Q  65 tggccaaacatgagaaaacgtgttctgacaatcaacatgcttttata 111  Q
    ||||||||||||||||||| |||||||||||| |||||| |||||||    
T  16238 tggccaaacatgagaaaacatgttctgacaataaacatgtttttata 16192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 16154 - 16073
Alignment:
Q  120 ttttgacattttcggttttctagtaccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgt 202  Q
    |||| ||| ||| ||||| |||| |||| ||||| ||||| |||||||||||||||||| | |||||||||| ||| ||||||    
T  16154 tttttacacttttggtttcctagcacca-aggttattgactttctacatagagttcaaagggtcatgcatagtaatatcatgt 16073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University