View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8788_low_9 (Length: 271)
Name: NF8788_low_9
Description: NF8788
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8788_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 129; Significance: 8e-67; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 65 - 254
Target Start/End: Complemental strand, 5821570 - 5821377
Alignment:
| Q |
65 |
cgttacggtgatgagttaatgcatcattatactttgaatgtggatgaaactttgtgttgatggaagagt----gaggtttcatttttatttgaagtaact |
160 |
Q |
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| T |
5821570 |
cgttatggtaatgagttaatgcatcattatactttgaatgtggatgaaactttgtgttggtggaagagtaagtgaggttttatttttatttgaagtaact |
5821471 |
T |
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| Q |
161 |
cgctactaacattatgttaatcctacgtcttccgggccagctaacttgcaacattcggacggtactgaaggtgggtttagtcgggtggattggt |
254 |
Q |
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| T |
5821470 |
tgctactagcattatgttaatcctacgtctgccgggccagataactcgcaacatttgaacggtactgaacgtgggtttagtcgggtggattggt |
5821377 |
T |
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