View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8789_low_9 (Length: 280)
Name: NF8789_low_9
Description: NF8789
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8789_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 21 - 256
Target Start/End: Complemental strand, 4880866 - 4880631
Alignment:
| Q |
21 |
aattaatttaactcttagtgtatattataaattattataaagattaattactgataactatgaatttttgttgattatttaatttcagcctggatcaact |
120 |
Q |
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| T |
4880866 |
aattaatttaactcttagtgtatattataaattattataaagattaattactgataactatgaatttttgttgattatttaatttcagcctggatcaact |
4880767 |
T |
|
| Q |
121 |
tcacatgcttgctcacaaccatagaaagtacagtgacaagggcaacaaccgactggaaataactcagatgttcaattactattataattttcagtgattg |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
4880766 |
tcacatgcttgctcacaaccatagaaagtacagtgacaagggcaacaaccgactggaaataattcagatgttcaattactattataattttcagtgattg |
4880667 |
T |
|
| Q |
221 |
aaatatgaaagcactactcattagcatagtattatc |
256 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
4880666 |
aaatatgaaagcactactcattagcatagtattatc |
4880631 |
T |
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