View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8790_high_7 (Length: 223)

Name: NF8790_high_7
Description: NF8790
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8790_high_7
NF8790_high_7
[»] chr8 (23 HSPs)
chr8 (5-206)||(2560687-2560888)
chr8 (23-203)||(8911799-8911979)
chr8 (67-206)||(31284868-31285007)
chr8 (3-206)||(44026877-44027080)
chr8 (65-201)||(21279558-21279694)
chr8 (67-206)||(23619152-23619290)
chr8 (87-206)||(10498037-10498156)
chr8 (17-204)||(5253188-5253374)
chr8 (3-206)||(33419788-33419989)
chr8 (97-206)||(23612363-23612472)
chr8 (3-206)||(12516233-12516439)
chr8 (3-206)||(17931113-17931318)
chr8 (5-206)||(13196991-13197192)
chr8 (114-197)||(30785167-30785252)
chr8 (147-206)||(16954048-16954106)
chr8 (147-206)||(18824184-18824242)
chr8 (147-206)||(18825677-18825735)
chr8 (147-203)||(10664224-10664279)
chr8 (147-203)||(23597480-23597535)
chr8 (147-203)||(18721078-18721133)
chr8 (173-203)||(5584224-5584254)
chr8 (147-203)||(20887817-20887873)
chr8 (147-203)||(25591271-25591326)
[»] chr2 (31 HSPs)
chr2 (3-206)||(22630958-22631162)
chr2 (17-206)||(40258926-40259113)
chr2 (64-206)||(37937007-37937149)
chr2 (3-204)||(3875404-3875605)
chr2 (3-206)||(12219913-12220116)
chr2 (67-206)||(23205351-23205490)
chr2 (67-206)||(23676955-23677094)
chr2 (67-206)||(16790545-16790683)
chr2 (87-206)||(1386212-1386330)
chr2 (58-206)||(16179311-16179463)
chr2 (3-204)||(17877223-17877425)
chr2 (5-199)||(27266908-27267107)
chr2 (147-206)||(9188442-9188500)
chr2 (147-206)||(33310923-33310981)
chr2 (147-203)||(8888893-8888948)
chr2 (147-203)||(24235357-24235412)
chr2 (147-203)||(24238629-24238684)
chr2 (147-203)||(42368492-42368547)
chr2 (147-203)||(45499151-45499206)
chr2 (147-206)||(9185214-9185272)
chr2 (147-206)||(38015775-38015833)
chr2 (169-203)||(25959482-25959516)
chr2 (173-206)||(10601135-10601168)
chr2 (170-203)||(30274561-30274594)
chr2 (147-203)||(11347687-11347742)
chr2 (147-203)||(25871041-25871096)
chr2 (147-203)||(25874438-25874493)
chr2 (147-203)||(29440752-29440807)
chr2 (147-199)||(37279473-37279524)
chr2 (64-207)||(9966151-9966294)
chr2 (169-199)||(40677556-40677586)
[»] chr3 (42 HSPs)
chr3 (17-206)||(17531429-17531616)
chr3 (17-206)||(17528534-17528721)
chr3 (88-206)||(48063812-48063930)
chr3 (87-199)||(35751744-35751856)
chr3 (3-206)||(17039790-17039996)
chr3 (67-206)||(25442634-25442772)
chr3 (67-206)||(32366904-32367042)
chr3 (23-206)||(34983562-34983745)
chr3 (70-206)||(11785058-11785196)
chr3 (64-206)||(54720253-54720395)
chr3 (87-206)||(15195117-15195235)
chr3 (67-206)||(12560999-12561137)
chr3 (137-206)||(46885266-46885335)
chr3 (24-206)||(25486374-25486559)
chr3 (3-204)||(37408901-37409102)
chr3 (3-206)||(27092114-27092320)
chr3 (3-206)||(22416610-22416808)
chr3 (87-203)||(52991002-52991118)
chr3 (17-164)||(17141642-17141789)
chr3 (147-203)||(11190887-11190942)
chr3 (147-206)||(50461325-50461383)
chr3 (147-203)||(539187-539242)
chr3 (147-203)||(2775855-2775910)
chr3 (147-203)||(2779097-2779152)
chr3 (147-203)||(7486932-7486987)
chr3 (147-203)||(10106378-10106433)
chr3 (147-203)||(24125860-24125915)
chr3 (147-203)||(30691096-30691151)
chr3 (147-203)||(35412866-35412921)
chr3 (169-203)||(2873946-2873980)
chr3 (169-203)||(6922902-6922936)
chr3 (147-201)||(28266279-28266332)
chr3 (147-203)||(16184461-16184516)
chr3 (171-203)||(24129160-24129192)
chr3 (147-203)||(43927210-43927265)
chr3 (173-203)||(8461272-8461302)
chr3 (147-197)||(23298398-23298447)
chr3 (169-199)||(28327748-28327778)
chr3 (169-199)||(28331073-28331103)
chr3 (169-203)||(54724123-54724157)
chr3 (170-203)||(12541078-12541111)
chr3 (147-196)||(18641556-18641604)
[»] chr1 (17 HSPs)
chr1 (17-207)||(27354726-27354917)
chr1 (17-204)||(905471-905658)
chr1 (17-199)||(672861-673043)
chr1 (70-203)||(1950238-1950370)
chr1 (147-203)||(20448109-20448164)
chr1 (147-203)||(20533876-20533931)
chr1 (147-206)||(45960534-45960592)
chr1 (147-203)||(2794504-2794559)
chr1 (147-203)||(20399130-20399185)
chr1 (147-203)||(28111333-28111388)
chr1 (147-206)||(3796616-3796674)
chr1 (147-206)||(31205114-31205172)
chr1 (161-199)||(33898621-33898659)
chr1 (170-203)||(23021712-23021745)
chr1 (147-203)||(27536323-27536378)
chr1 (169-199)||(23441068-23441098)
chr1 (169-203)||(49498293-49498327)
[»] chr4 (30 HSPs)
chr4 (17-206)||(30392717-30392906)
chr4 (17-206)||(53009343-53009531)
chr4 (64-206)||(25962251-25962393)
chr4 (87-197)||(46955273-46955383)
chr4 (67-206)||(18672869-18673007)
chr4 (3-206)||(40493154-40493354)
chr4 (3-204)||(21419923-21420121)
chr4 (3-206)||(29544658-29544861)
chr4 (139-206)||(11195940-11196007)
chr4 (91-204)||(15164418-15164530)
chr4 (147-206)||(29325098-29325156)
chr4 (147-206)||(40616595-40616653)
chr4 (147-206)||(52530722-52530780)
chr4 (147-203)||(34319709-34319764)
chr4 (147-203)||(40902865-40902920)
chr4 (147-203)||(44808747-44808802)
chr4 (147-206)||(24150949-24151007)
chr4 (147-206)||(38283268-38283326)
chr4 (169-203)||(48637803-48637837)
chr4 (147-203)||(5670852-5670907)
chr4 (147-203)||(5673170-5673225)
chr4 (147-203)||(18911781-18911836)
chr4 (171-203)||(34017575-34017607)
chr4 (169-203)||(12238555-12238589)
chr4 (105-207)||(1388101-1388204)
chr4 (147-196)||(5706669-5706717)
chr4 (70-123)||(37103079-37103132)
chr4 (147-203)||(15432356-15432411)
chr4 (147-203)||(27014537-27014592)
chr4 (147-203)||(27676837-27676892)
[»] chr7 (21 HSPs)
chr7 (3-206)||(3067766-3067969)
chr7 (3-199)||(13842762-13842956)
chr7 (3-204)||(10469266-10469467)
chr7 (17-206)||(20080507-20080696)
chr7 (67-206)||(37165938-37166077)
chr7 (67-206)||(26135920-26136058)
chr7 (3-206)||(14683231-14683436)
chr7 (64-206)||(9132552-9132694)
chr7 (67-164)||(26144341-26144438)
chr7 (140-204)||(20595935-20595999)
chr7 (147-206)||(16166011-16166069)
chr7 (147-206)||(6603720-6603778)
chr7 (169-206)||(13449573-13449610)
chr7 (147-203)||(4543069-4543124)
chr7 (147-203)||(37415218-37415273)
chr7 (70-125)||(2441144-2441199)
chr7 (147-206)||(8277259-8277317)
chr7 (172-203)||(45286864-45286895)
chr7 (169-203)||(4547162-4547196)
chr7 (169-203)||(23224700-23224734)
chr7 (169-199)||(44017576-44017606)
[»] chr6 (24 HSPs)
chr6 (3-206)||(24400316-24400517)
chr6 (67-206)||(19476201-19476340)
chr6 (3-206)||(24410435-24410636)
chr6 (3-202)||(4512613-4512811)
chr6 (67-206)||(7128498-7128636)
chr6 (67-206)||(24155152-24155291)
chr6 (67-206)||(28230795-28230933)
chr6 (67-206)||(18855812-18855950)
chr6 (87-206)||(26896043-26896162)
chr6 (3-206)||(32109805-32110009)
chr6 (67-206)||(13947217-13947351)
chr6 (89-197)||(11125489-11125598)
chr6 (169-206)||(2379528-2379565)
chr6 (167-203)||(3596571-3596607)
chr6 (147-203)||(9954239-9954294)
chr6 (147-203)||(11729122-11729177)
chr6 (147-203)||(30655734-30655789)
chr6 (64-207)||(22560944-22561087)
chr6 (170-203)||(1125527-1125560)
chr6 (147-203)||(11187989-11188045)
chr6 (147-203)||(5737854-5737909)
chr6 (147-203)||(23381962-23382017)
chr6 (169-203)||(23384542-23384576)
chr6 (169-203)||(26942225-26942259)
[»] chr5 (25 HSPs)
chr5 (38-206)||(26907202-26907372)
chr5 (17-206)||(23044291-23044479)
chr5 (17-206)||(26292939-26293127)
chr5 (87-205)||(11958979-11959097)
chr5 (58-206)||(17664741-17664889)
chr5 (67-206)||(12088155-12088293)
chr5 (5-206)||(18952830-18953034)
chr5 (67-198)||(17748637-17748767)
chr5 (67-206)||(34132770-34132908)
chr5 (67-206)||(34143001-34143139)
chr5 (67-203)||(12058282-12058417)
chr5 (87-205)||(22131449-22131567)
chr5 (137-206)||(35049770-35049839)
chr5 (64-206)||(20056037-20056182)
chr5 (166-203)||(43492050-43492087)
chr5 (147-203)||(22936732-22936787)
chr5 (147-203)||(41306318-41306373)
chr5 (147-203)||(41876546-41876601)
chr5 (144-203)||(37215313-37215371)
chr5 (169-203)||(42063226-42063260)
chr5 (147-203)||(26752493-26752548)
chr5 (147-206)||(14015928-14015986)
chr5 (169-203)||(31864012-31864046)
chr5 (3-102)||(20055909-20056009)
chr5 (171-203)||(40915949-40915981)
[»] scaffold0084 (2 HSPs)
scaffold0084 (67-199)||(19477-19609)
scaffold0084 (137-199)||(29626-29688)
[»] scaffold0035 (2 HSPs)
scaffold0035 (64-206)||(64055-64197)
scaffold0035 (70-123)||(62720-62773)
[»] scaffold0048 (1 HSPs)
scaffold0048 (67-206)||(15609-15747)
[»] scaffold0807 (1 HSPs)
scaffold0807 (17-206)||(1858-2046)
[»] scaffold0191 (1 HSPs)
scaffold0191 (23-206)||(4069-4252)
[»] scaffold0038 (1 HSPs)
scaffold0038 (67-206)||(31292-31430)
[»] scaffold0056 (1 HSPs)
scaffold0056 (65-206)||(65108-65249)
[»] scaffold0065 (2 HSPs)
scaffold0065 (3-206)||(58466-58668)
scaffold0065 (164-206)||(58416-58458)
[»] scaffold0218 (1 HSPs)
scaffold0218 (65-206)||(10603-10743)
[»] scaffold0126 (1 HSPs)
scaffold0126 (3-199)||(14112-14306)
[»] scaffold0009 (1 HSPs)
scaffold0009 (64-157)||(242267-242360)
[»] scaffold1208 (1 HSPs)
scaffold1208 (147-203)||(459-514)
[»] scaffold0066 (1 HSPs)
scaffold0066 (3-179)||(57401-57576)
[»] scaffold0250 (1 HSPs)
scaffold0250 (147-206)||(19672-19730)
[»] scaffold0962 (1 HSPs)
scaffold0962 (147-203)||(3073-3128)
[»] scaffold0005 (1 HSPs)
scaffold0005 (147-203)||(293294-293349)
[»] scaffold0007 (1 HSPs)
scaffold0007 (169-199)||(92736-92766)
[»] scaffold1785 (1 HSPs)
scaffold1785 (70-123)||(110-163)
[»] scaffold0381 (1 HSPs)
scaffold0381 (147-203)||(5191-5246)


Alignment Details
Target: chr8 (Bit Score: 178; Significance: 4e-96; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 5 - 206
Target Start/End: Original strand, 2560687 - 2560888
Alignment:
Q  5 gaaagatctgacctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaatt 104  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||    
T  2560687 gaaagacctgacctcatttctctcttattcttaaaaaccaactttaaattcaatctttacttttatgcaatcaaatcaatctactacctagtggcaaatt 2560786  T
Q  105 aaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttg 204  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2560787 aaaagaacctttatacatcctttttaataacgtaattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttg 2560886  T
Q  205 gt 206  Q
    ||    
T  2560887 gt 2560888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 23 - 203
Target Start/End: Original strand, 8911799 - 8911979
Alignment:
Q  23 tctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacat 122  Q
    ||||||||||||||||||   | ||| |||||| ||| || ||||||||||| |||| ||||  ||||||||||||||||| |||||||| |||||||||    
T  8911799 tctctcttattcttaaaactaatcttcaaattctatcattacttttatgcaaccaaaccaatcaactgcctagtggcaaatcaaaagaacttttatacat 8911898  T
Q  123 cctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    |||   | | ||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  8911899 cctaacttacaacgtaattgaattattgagattaaaatcagtccttgtgggaacgatatttttactacttcgatagtattt 8911979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 31284868 - 31285007
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||| ||||  ||| |||||||||||||||||||||| ||||||||||||  || | ||| |||||||||||||||||||||||||||| |    
T  31284868 ttatgcaaacaaaccaatcaactacctagtggcaaattaaaagaacctttatacatcctaatttacaacgtaattgaattattgagattaaaaccagtcc 31284967  T
Q  167 ttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  31284968 ttgtgggaacgatatttttactacttcgatagtatttggt 31285007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 44027080 - 44026877
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaa 102  Q
    |||||||| || | |||||||||||||||||||||||| | | |||||| |||  |  ||  ||||||||||||||| ||||  | || |||||||||||    
T  44027080 tcgaaagacctaaactcatttctctcttattcttaaaaccaatctttaatttctgttattaattttatgcaatcaaaccaatcaaatgtctagtggcaaa 44026981  T
Q  103 ttaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatt 202  Q
    | |||||||| ||||||||||||   | | ||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  44026980 tcaaaagaacttttatacatcctaacttacaacgtaattgaattattgagattaaaatcagtccttgtgggaacgatatttttactacttcgatagtatt 44026881  T
Q  203 tggt 206  Q
    ||||    
T  44026880 tggt 44026877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 65 - 201
Target Start/End: Complemental strand, 21279694 - 21279558
Alignment:
Q  65 ttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagt 164  Q
    |||||||||||| || |||| |||||||||||||||||| |||| ||| |||| ||||||| ||||||||| || |||||| ||||||||||||| ||||    
T  21279694 ttttatgcaatccaaccaatctactgcctagtggcaaataaaaataacttttacacatcctatttaataacgtagttgaataattgagattaaaaacagt 21279595  T
Q  165 tcttgtgggaacgatatttttactacttcgatagtat 201  Q
     ||||||||||||||||||||||||||||||||||||    
T  21279594 ccttgtgggaacgatatttttactacttcgatagtat 21279558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 23619290 - 23619152
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||||||||  ||||||||| |||||||||||||||| |||||||||| |   | | ||| |||||||||||||||||||||||||||| |    
T  23619290 ttatgcaaacaaatcaatcaactgcctagcggcaaattaaaagaacttttatacatcttaagttacaacgtaattgaattattgagattaaaaccagtcc 23619191  T
Q  167 ttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||| ||||| |||||||||||||||||||||||||||||    
T  23619190 ttgt-ggaacaatatttttactacttcgatagtatttggt 23619152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 10498156 - 10498037
Alignment:
Q  87 actgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatattttta 186  Q
    |||||||||  ||||||||||||||| ||||||||||||   | | ||| |||||||||||||||||||||||| ||| || ||||||||||||||||||    
T  10498156 actgcctagcagcaaattaaaagaacttttatacatcctaagttacaacgtaattgaattattgagattaaaacgagtcctcgtgggaacgatattttta 10498057  T
Q  187 ctacttcgatagtatttggt 206  Q
    ||||||||||||||||||||    
T  10498056 ctacttcgatagtatttggt 10498037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 204
Target Start/End: Original strand, 5253188 - 5253374
Alignment:
Q  17 ctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacattt 116  Q
    ||||| |||||||||||||||||| | | |||||  |||  ||||| ||||||||||| |||| |||| |||||  |||| |||||  |||| ||| |||    
T  5253188 ctcatctctctcttattcttaaaaccaatctttattttctgtctttacttttatgcaaacaaaccaatctactgtttagtagcaaaacaaaataac-ttt 5253286  T
Q  117 atacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttg 204  Q
    ||||||| | ||| | ||| ||||||||||||||| ||||||| || | ||||||||||||||||||||||||||||||||| |||||    
T  5253287 atacatcatattttacaacgtaattgaattattgaaattaaaatcaatccttgtgggaacgatatttttactacttcgatagaatttg 5253374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 206
Target Start/End: Original strand, 33419788 - 33419989
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaa 102  Q
    |||||||| || | ||||| |||||||| ||||||||| |||||||||  ||   || || |||||||||||||||| ||||  ||||||||||||||      
T  33419788 tcgaaagacctaaactcatctctctcttcttcttaaaa-ccaactttactttatgtcgttacttttatgcaatcaaaacaatcaactgcctagtggcat- 33419885  T
Q  103 ttaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatt 202  Q
    | |||| ||| ||||||||||||   | | ||| |||||||||||| |||||||||| |||| ||||||| ||| |||||||||||||||||||||||||    
T  33419886 tcaaaataacttttatacatcctaacttacaacgtaattgaattatggagattaaaatcagtccttgtggaaacaatatttttactacttcgatagtatt 33419985  T
Q  203 tggt 206  Q
    ||||    
T  33419986 tggt 33419989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 97 - 206
Target Start/End: Original strand, 23612363 - 23612472
Alignment:
Q  97 ggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgat 196  Q
    |||||||||||||||| ||||||||||||  || | ||| |||||||||||||||||||||||||||  |||||||||||   |||||||||||||||||    
T  23612363 ggcaaattaaaagaacctttatacatcctaatttacaacgtaattgaattattgagattaaaaccagcccttgtgggaacatgatttttactacttcgat 23612462  T
Q  197 agtatttggt 206  Q
    ||||||||||    
T  23612463 agtatttggt 23612472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 12516439 - 12516233
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaa-ctttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaa 101  Q
    |||||||| ||||  |||| ||||||| |||||| | |||||| |||||  |||  || || |||||||||||||||| ||||  ||||||||||| |||    
T  12516439 tcgaaagacctgatttcatctctctctcattctttacaaccaatctttattttctgtcgttacttttatgcaatcaaaccaatcaactgcctagtgacaa 12516340  T
Q  102 attaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatat--ttttactacttcgatagt 199  Q
    || |||| ||||||||||||| ||   ||||||||   |||||||||||| ||||||| |||| ||||||||||||||||  |||||| |||||||||||    
T  12516339 atcaaaataacatttatacattctgaataataacacctttgaattattgaaattaaaaacagtccttgtgggaacgatattattttacaacttcgatagt 12516240  T
Q  200 atttggt 206  Q
     ||||||    
T  12516239 ttttggt 12516233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 206
Target Start/End: Original strand, 17931113 - 17931318
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaa-ctttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaa 101  Q
    |||||||| || | ||||| |||||||| ||||| |||||||| |||||  |||  || ||  ||||||||||||||| ||||  |||||||||||||||    
T  17931113 tcgaaagacctaatctcatctctctcttgttctttaaaaccaatctttattttctgtcattatttttatgcaatcaaaccaatcaactgcctagtggcaa 17931212  T
Q  102 attaaaa-gaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagta 200  Q
    || |||| || | ||| ||||||||  |||||||| || |  |||| ||| |||||||| |||| ||||||||||| ||||||||||||||||||||||     
T  17931213 atcaaaatgaccttttttacatcctaattaataacgtactaaaattgttgcgattaaaaacagtccttgtgggaacaatatttttactacttcgatagtt 17931312  T
Q  201 tttggt 206  Q
    ||||||    
T  17931313 tttggt 17931318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 206
Target Start/End: Original strand, 13196991 - 13197192
Alignment:
Q  5 gaaagatctgacctcatttctctcttattcttaaaaaccaa-ctttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaat 103  Q
    |||||| |||| ||||| | |||||||||||| | |||||| |||||  |||| |  || |||||||| |||||||  |||  |||||||||||||||||    
T  13196991 gaaagacctgatctcatctatctcttattctttacaaccaatctttattttcagttgttacttttatggaatcaaacaaatcaactgcctagtggcaaat 13197090  T
Q  104 taaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
     |||| ||| |||||| ||||| ||||||||| || | ||||| |||||||||||| ||||  | |||||||||||| |||||||||||||||| | |||    
T  13197091 caaaataacctttatatatcctatttaataacgtactagaattgttgagattaaaagcagtcttcgtgggaacgata-ttttactacttcgataattttt 13197189  T
Q  204 ggt 206  Q
    |||    
T  13197190 ggt 13197192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 197
Target Start/End: Original strand, 30785167 - 30785252
Alignment:
Q  114 tttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatat--ttttactacttcgata 197  Q
    ||||||||||||  |||||||| | ||||||||||||| ||||||| || | ||||||||||||||||  ||||||||||||||||    
T  30785167 tttatacatcctaattaataacgtgattgaattattgaaattaaaaacaatccttgtgggaacgatattattttactacttcgata 30785252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 16954048 - 16954106
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||| || ||| || ||||||||||||||||||||||||||||||||||||||    
T  16954048 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttggt 16954106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 18824242 - 18824184
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||| || ||| || ||||||||||||||||||||||||||||||||||||||    
T  18824242 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttggt 18824184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 18825735 - 18825677
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||| || ||| || ||||||||||||||||||||||||||||||||||||||    
T  18825735 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttggt 18825677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 10664224 - 10664279
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||||||    
T  10664224 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtattt 10664279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 23597480 - 23597535
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||||||    
T  23597480 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtattt 23597535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 18721133 - 18721078
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || ||||||||||||||||||||||||| |||||||||    
T  18721133 attgagattaacac-agtcctcgtgggaacgatatttttactacttcaatagtattt 18721078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 203
Target Start/End: Complemental strand, 5584254 - 5584224
Alignment:
Q  173 gaacgatatttttactacttcgatagtattt 203  Q
    |||||||||||||||||||||||||||||||    
T  5584254 gaacgatatttttactacttcgatagtattt 5584224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 20887817 - 20887873
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgata-tttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| ||||||||||||||| |||||| ||||||||||||||||    
T  20887817 attgagattaacac-agtccttgtgggaacgatattttttattacttcgatagtattt 20887873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 25591326 - 25591271
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || |||| | ||||||||||||||||||| ||||||||| |||||    
T  25591326 attgagattaacac-agttttcgtgggaacgatatttttaccacttcgataatattt 25591271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 3e-50; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 3 - 206
Target Start/End: Original strand, 22630958 - 22631162
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaactttaaattcaatc-tttgcttttatgcaatcaaatcaatttactgcctagtggcaa 101  Q
    |||||||| || | ||||| |||||||||||||||||||| | |||||  ||| ||| ||| ||||||||||| |||| ||||  |||||||||||||||    
T  22630958 tcgaaagacctaaactcatctctctcttattcttaaaaacaatctttattttctatcatttacttttatgcaaacaaaccaatcaactgcctagtggcaa 22631057  T
Q  102 attaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtat 201  Q
    || |||||||| ||||||||||||   | | ||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  22631058 atcaaaagaacttttatacatcctaacttacaacataattaaattattgagattaaaaccggtccttgtgggaacgatatttttactacttcgatagtat 22631157  T
Q  202 ttggt 206  Q
    |||||    
T  22631158 ttggt 22631162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 17 - 206
Target Start/End: Complemental strand, 40259113 - 40258926
Alignment:
Q  17 ctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacattt 116  Q
    ||||| |||||||||||||||||| | | |||||  |||  || ||||  |||||||| |||| ||||  | |||||||||||||||||||||||| |||    
T  40259113 ctcatctctctcttattcttaaaaccaatctttattttctgtcattgc--ttatgcaaacaaaccaatcaattgcctagtggcaaattaaaagaaccttt 40259016  T
Q  117 atacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||||||||  || | ||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40259015 atacatcctaatttacaacgtaattgaattatagagattaaaaccagtccttgtgggaacgatatttttactacttcgatagtatttggt 40258926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 37937149 - 37937007
Alignment:
Q  64 cttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccag 163  Q
    ||||||||||| |||| |||| |||||||||||||||||| |||||||| ||||||||||||   | | ||| || |||||||||||| |||||||||||    
T  37937149 cttttatgcaaacaaaccaatctactgcctagtggcaaatcaaaagaacttttatacatcctaacttacaacgtagttgaattattgaaattaaaaccag 37937050  T
Q  164 ttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  37937049 ttcttgtgggaatgatatttttactacttcgatagtatttggt 37937007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 3 - 204
Target Start/End: Original strand, 3875404 - 3875605
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaa 102  Q
    |||||||| || | ||||| | |||||||||||||||| | | |||||  |||  || || ||||||||||| |||| ||||  |||| |||||||||||    
T  3875404 tcgaaagacctaaactcatctttctcttattcttaaaaccaatctttattttctgtcattacttttatgcaaacaaaccaatcaactgactagtggcaaa 3875503  T
Q  103 ttaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatt 202  Q
    | |||||||| ||||||||||||   | | ||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  3875504 tcaaaagaacttttatacatcctaacttacaacgtaattgaattattgagattaaaaccggtccttgtgggaacgatatttttactacttcgatagtatt 3875603  T
Q  203 tg 204  Q
    ||    
T  3875604 tg 3875605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 206
Target Start/End: Original strand, 12219913 - 12220116
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaa 102  Q
    |||||||| || | ||||| |||||||||||||||||| | | |||||  ||   || ||  |||||||||| |||| ||||  ||||||||||||||||    
T  12219913 tcgaaagacctaaactcatctctctcttattcttaaaatcaacctttactttttgtcgttaattttatgcaaacaaaccaatcaactgcctagtggcaaa 12220012  T
Q  103 ttaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatt 202  Q
    | |||| ||| ||||||||||||   | | ||| ||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||    
T  12220013 tcaaaaaaacttttatacatcctaacttacaacgtaattgaattattgagattaaaatcagtccttgtgggaacgaaatttttactacttcgatagtatt 12220112  T
Q  203 tggt 206  Q
    ||||    
T  12220113 tggt 12220116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 23205351 - 23205490
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||| ||||  ||||||||||||||||| |||| ||| ||||||||||||   | | ||| |||||||||||||||||||||||||||| |    
T  23205351 ttatgcaaacaaaccaatcaactgcctagtggcaaatcaaaataacttttatacatcctaacttacaacgtaattgaattattgagattaaaaccagtcc 23205450  T
Q  167 ttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  23205451 tcgtgggaacgatatttttactacttcgatagtatttggt 23205490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 23676955 - 23677094
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||| ||||  ||||||||||||||||| |||| ||| ||||||||||||   | | ||| |||||||||||||||||||||||||||| |    
T  23676955 ttatgcaaacaaaccaatcaactgcctagtggcaaatcaaaataacttttatacatcctaacttacaacgtaattgaattattgagattaaaaccagtcc 23677054  T
Q  167 ttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    | ||||||||||||||||||||||||||||||||||||||    
T  23677055 tcgtgggaacgatatttttactacttcgatagtatttggt 23677094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 16790683 - 16790545
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||||||||  ||||||||| |||||||||||||||| |||||||||| |   | | ||| |||||||||||||||||||||||||||| |    
T  16790683 ttatgcaaacaaatcaatcaactgcctagcggcaaattaaaagaacttttatacatcttaagttacaacgtaattgaattattgagattaaaaccagtcc 16790584  T
Q  167 ttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  16790583 ttgt-ggagcgatatttttactacttcgatagtatttggt 16790545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 1386330 - 1386212
Alignment:
Q  87 actgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatattttta 186  Q
    ||||||||| |||||||||||||||| |||||||||| |   | | ||| |||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  1386330 actgcctagcggcaaattaaaagaacctttatacatcttaagttacaacgtaattgaattattgagattaaaaccagtccttgtgggaacgata-tttta 1386232  T
Q  187 ctacttcgatagtatttggt 206  Q
    ||||||||||||||||||||    
T  1386231 ctacttcgatagtatttggt 1386212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 58 - 206
Target Start/End: Original strand, 16179311 - 16179463
Alignment:
Q  58 tctttgcttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataa----cataattgaattattgaga 153  Q
    ||||| ||||||||||| || | ||||  ||| ||||||||||||  |||| ||| |||||||||||| ||| | ||    | |||||||||||||||||    
T  16179311 tctttacttttatgcaaacagaccaatcaacttcctagtggcaaaacaaaataacttttatacatcctattttacaatgtacgtaattgaattattgaga 16179410  T
Q  154 ttaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16179411 ttaaaaccagtccttgtgggaacgatatttttactacttcgatagtatttggt 16179463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 204
Target Start/End: Original strand, 17877223 - 17877425
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaactttaaatt-caatctttgcttttat-gcaatcaaatcaatttactgcctagtggca 100  Q
    |||||||| || | ||||| || ||||||||||||||| |||||||| | || |  || || ||||||| |||| |||| ||||  |||| |||||||||    
T  17877223 tcgaaagacctaaactcatctccctcttattcttaaaa-ccaacttttactttctgtcgttacttttattgcaaacaaaccaatcaactgtctagtggca 17877321  T
Q  101 aattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagta 200  Q
    ||  |||||||| |||||||||| | ||| | ||| ||||||||||||||| ||||||||||   || |||||| ||||||||||||||||||| |||||    
T  17877322 aaacaaaagaacttttatacatcatattttacaacgtaattgaattattgaaattaaaaccaaccctggtgggaccgatatttttactacttcggtagta 17877421  T
Q  201 tttg 204  Q
    ||||    
T  17877422 tttg 17877425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 27266908 - 27267107
Alignment:
Q  5 gaaagatctgacctcatttctctcttattcttaaaaaccaa-ctttaaattcaa-tctttgcttttatgcaatcaaatcaatttactgcctagtggcaaa 102  Q
    |||||| |||| ||||| ||||||||||||||  ||||||| |||||  ||| | |  || |||||||||||| ||| ||||  ||||||||||||||||    
T  27266908 gaaagacctgatctcatctctctcttattcttttaaaccaatctttactttccactaattacttttatgcaattaaaccaatcaactgcctagtggcaaa 27267007  T
Q  103 ttaaaagaacat--ttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatt-tttactacttcgatagt 199  Q
      |||| || ||  |||||||||||     ||||| |  ||||||||||||||||||||  ||| ||||||||||||||||| ||||| |||||||||||    
T  27267008 aaaaaaaaaaatctttatacatcctgaacgataacgtctttgaattattgagattaaaaatagtccttgtgggaacgatattatttaccacttcgatagt 27267107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 9188500 - 9188442
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||| || ||| || ||||||||||||||||||||||||||||||||||||||    
T  9188500 attgagattaacac-agtactcgtgggaacgatatttttactacttcgatagtatttggt 9188442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 33310923 - 33310981
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||| || ||| || ||||||||||||||||||||||||||||||||||||||    
T  33310923 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttggt 33310981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 8888893 - 8888948
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||||||    
T  8888893 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtattt 8888948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 24235357 - 24235412
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||||||    
T  24235357 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtattt 24235412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 24238629 - 24238684
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||||||    
T  24238629 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtattt 24238684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 42368547 - 42368492
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || |||| |||||||||||||||||||| ||||||||||||||||    
T  42368547 attgagattaacac-agtttttgtgggaacgatatttttattacttcgatagtattt 42368492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 45499206 - 45499151
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||||||    
T  45499206 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtattt 45499151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 9185272 - 9185214
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||| || ||| || |||||||| |||||||||||||||||||||||||||||    
T  9185272 attgagattaacac-agtcctcgtgggaacaatatttttactacttcgatagtatttggt 9185214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 38015775 - 38015833
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||| || ||| || |||||||| |||||||||||||||||||||||||||||    
T  38015775 attgagattaacac-agtcctcgtgggaacaatatttttactacttcgatagtatttggt 38015833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 203
Target Start/End: Complemental strand, 25959516 - 25959482
Alignment:
Q  169 gtgggaacgatatttttactacttcgatagtattt 203  Q
    |||||||||||||||||||||||||||||||||||    
T  25959516 gtgggaacgatatttttactacttcgatagtattt 25959482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 206
Target Start/End: Original strand, 10601135 - 10601168
Alignment:
Q  173 gaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||||||||||||||||||||||||||    
T  10601135 gaacgatatttttactacttcgatagtatttggt 10601168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 30274594 - 30274561
Alignment:
Q  170 tgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||||||||||||||||||||||||||    
T  30274594 tgggaacgatatttttactacttcgatagtattt 30274561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 11347742 - 11347687
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||| ||||||||||    
T  11347742 attgagattaacac-agtcctcgtgggaacgatatttttactactttgatagtattt 11347687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 25871041 - 25871096
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || || ||||||||||||||||||||||||||||||||    
T  25871041 attgagattaacac-agtcctcgtaggaacgatatttttactacttcgatagtattt 25871096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 25874438 - 25874493
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||| ||||||||||||||||||||||||||    
T  25874438 attgagattaacac-agtcctcgtgggaacaatatttttactacttcgatagtattt 25874493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 29440752 - 29440807
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||| ||||||||||||||||||||||||||||||    
T  29440752 attgagattaacac-agtcctcgtggaaacgatatttttactacttcgatagtattt 29440807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 199
Target Start/End: Complemental strand, 37279524 - 37279473
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagt 199  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||    
T  37279524 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagt 37279473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 9966294 - 9966151
Alignment:
Q  64 cttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccag 163  Q
    |||||||| ||||||| ||||  ||||||||| | ||||  |||| ||| ||||||||||||   ||||||||  |||||||||||||  |||| |  ||    
T  9966294 cttttatgtaatcaaaccaatcaactgcctagag-caaaacaaaataacttttatacatcctaaataataacactattgaattattgaagttaaca-tag 9966197  T
Q  164 ttcttgtgggaacgatat--ttttactacttcgatagtatttggtg 207  Q
    | |||||||||||||| |  ||||| ||||||||||||| ||||||    
T  9966196 tccttgtgggaacgatcttattttattacttcgatagtaattggtg 9966151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 199
Target Start/End: Complemental strand, 40677586 - 40677556
Alignment:
Q  169 gtgggaacgatatttttactacttcgatagt 199  Q
    |||||||||||||||||||||||||||||||    
T  40677586 gtgggaacgatatttttactacttcgatagt 40677556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 5e-49; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 17 - 206
Target Start/End: Complemental strand, 17531616 - 17531429
Alignment:
Q  17 ctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacattt 116  Q
    ||||| |||||||||||||||||| | | |||||  |||  || ||||  |||||||| |||| ||||  |||||||||||||| ||||||||||| |||    
T  17531616 ctcatctctctcttattcttaaaaccaatctttattttctgtcattgc--ttatgcaaacaaaccaatcaactgcctagtggcatattaaaagaaccttt 17531519  T
Q  117 atacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||||||||  || ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17531518 atacatcctaatttataacgtaattgaattattgagattaaaaccagtccttgtgggaacgatatttttactacttcgatagtatttggt 17531429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 206
Target Start/End: Complemental strand, 17528721 - 17528534
Alignment:
Q  17 ctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacattt 116  Q
    ||||| |||||||||||||||||| | | |||||  |||  || ||||  |||||||| |||| ||||  |||||||||||||||||||||||||| |||    
T  17528721 ctcatctctctcttattcttaaaaccaatctttattttctgtcattgc--ttatgcaaacaaaccaatcaactgcctagtggcaaattaaaagaaccttt 17528624  T
Q  117 atacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||||||||  || ||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  17528623 atacatcctaatttataacgtaattgtattattgagattaaaaccagtccttgtgggaacgatatttttactactttgatagtatttggt 17528534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 48063930 - 48063812
Alignment:
Q  88 ctgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttac 187  Q
    ||||||||||| ||||||||||||| ||||||||||||  || | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  48063930 ctgcctagtggaaaattaaaagaacctttatacatcctaatttacaacgtaattgaattattgagattaaaaccagtccttgtgggaacgatatttttac 48063831  T
Q  188 tacttcgatagtatttggt 206  Q
    |||||||||||||||||||    
T  48063830 tacttcgatagtatttggt 48063812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 87 - 199
Target Start/End: Original strand, 35751744 - 35751856
Alignment:
Q  87 actgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatattttta 186  Q
    ||||||||||||||||| |||| ||| |||||||||||| ||| | ||||||||||||||||||||||||||| ||||  ||||||||||||||||||||    
T  35751744 actgcctagtggcaaatcaaaataacttttatacatcctattttacaacataattgaattattgagattaaaatcagtctttgtgggaacgatattttta 35751843  T
Q  187 ctacttcgatagt 199  Q
    |||||||||||||    
T  35751844 ctacttcgatagt 35751856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 17039996 - 17039790
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaa-ctttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaa 101  Q
    |||||||| |||| |||||||||||||||||||| |||||||| |||||  |||  || || ||||||||||| ||||  |||  |||||||||||||||    
T  17039996 tcgaaagacctgatctcatttctctcttattctttaaaaccaatctttattttctgtcattacttttatgcaaccaaacaaatcaactgcctagtggcaa 17039897  T
Q  102 attaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatat--ttttactacttcgatagt 199  Q
    || |||| ||| ||||||||||||   |||||||  | |||||||||||||||| ||| |||| ||||||||||||||||  ||||||||||| ||||||    
T  17039896 atcaaaataacctttatacatcctgaataataacgcatttgaattattgagattgaaaacagtccttgtgggaacgatattattttactactttgatagt 17039797  T
Q  200 atttggt 206  Q
     ||||||    
T  17039796 ttttggt 17039790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 25442772 - 25442634
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||| ||||  ||||||||| |||||||||||||||| ||||||||||||  || | ||| ||||||||||||||||||||||| || | |    
T  25442772 ttatgcaaacaaaccaatcaactgcctagcggcaaattaaaagaacctttatacatcctaatttacaacgtaattgaattattgagattaaaatcaatcc 25442673  T
Q  167 ttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  25442672 ttgt-ggaacgatatttttactacttcgatagtatttggt 25442634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 32367042 - 32366904
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||||||||  ||||||||| |||||||||||||||| ||||||| || |   | | ||| |||||||||||||||||||||||||||| |    
T  32367042 ttatgcaaacaaatcaatcaactgcctagcggcaaattaaaagaacttttatacttcttaagttacaacgtaattgaattattgagattaaaaccagtcc 32366943  T
Q  167 ttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  32366942 ttgtgg-aacgatatttttactacttcgatagtatttggt 32366904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 23 - 206
Target Start/End: Complemental strand, 34983745 - 34983562
Alignment:
Q  23 tctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacat 122  Q
    ||||||||||||| |||| | | |||||| ||   || || ||||||||||| |||| ||||  |||||||||||| |||| |||||||| |||||||||    
T  34983745 tctctcttattctcaaaaccaatctttaatttatgtcattacttttatgcaaacaaaccaatcaactgcctagtggtaaatcaaaagaacttttatacat 34983646  T
Q  123 cctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
     ||   | | ||| ||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||    
T  34983645 tctaacttacaacgtaattgaattattgagattaaaatcaatccttgtgggaacgatatttttactacttcgatagtatttggt 34983562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 70 - 206
Target Start/End: Original strand, 11785058 - 11785196
Alignment:
Q  70 tgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttat-acatcct-ttttaataacataattgaattattgagattaaaaccagttct 167  Q
    ||||| |||| |||| ||||||||||||| ||||||||||||| ||||| | ||||| |||||| ||| |||||||||||||||||||||| ||||| ||    
T  11785058 tgcaaacaaaccaatctactgcctagtggaaaattaaaagaacctttattatatcctattttaacaacgtaattgaattattgagattaaatccagtcct 11785157  T
Q  168 tgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||| ||||||||||||||||| |||||||||||||    
T  11785158 tgtgggagcgatatttttactactttgatagtatttggt 11785196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 64 - 206
Target Start/End: Original strand, 54720253 - 54720395
Alignment:
Q  64 cttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccag 163  Q
    |||||||| || |||| ||||  |||| |||||||||||| |||||||| ||||||||||||   | | ||| ||||||||||||||||||||||| |||    
T  54720253 cttttatgtaaacaaaccaatcaactgtctagtggcaaatcaaaagaacttttatacatcctaacttacaacgtaattgaattattgagattaaaatcag 54720352  T
Q  164 ttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    | ||||| |||||||||||||||||||||||||||||||||||    
T  54720353 tccttgtaggaacgatatttttactacttcgatagtatttggt 54720395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 15195235 - 15195117
Alignment:
Q  87 actgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatattttta 186  Q
    |||||||| |||||||  |||||||| |||||||||||| ||| | ||| |||||||||||||||||||||||||| | || ||||||||||||||||||    
T  15195235 actgcctactggcaaac-aaaagaacttttatacatcctattttacaacgtaattgaattattgagattaaaaccaatcctcgtgggaacgatattttta 15195137  T
Q  187 ctacttcgatagtatttggt 206  Q
    ||||||||||||||||||||    
T  15195136 ctacttcgatagtatttggt 15195117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 12561137 - 12560999
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||| ||||  ||||||||| |||||||||||||||| |||||||||| |   | ||||| || ||||||||||||||||||||||||| |    
T  12561137 ttatgcaaacaaaccaatcaactgcctagcggcaaattaaaagaacttttatacatcttaagttataacgtagttgaattattgagattaaaaccagtcc 12561038  T
Q  167 ttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||| |||||||||||||||||||||||| ||||| ||||    
T  12561037 ttgt-ggaacgatatttttactacttcgacagtatgtggt 12560999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 137 - 206
Target Start/End: Original strand, 46885266 - 46885335
Alignment:
Q  137 taattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  46885266 taattgaattattgagattaaaaccagtccttgtgggaacgatatttttactacttcgatagtatttggt 46885335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 206
Target Start/End: Original strand, 25486374 - 25486559
Alignment:
Q  24 ctctcttattcttaaaaaccaa-ctttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacat 122  Q
    ||||||||||||||||| |||| |||||  |||  || || |||||||||||||||| ||||  ||| ||||||||||||  |||| ||| |||||||||    
T  25486374 ctctcttattcttaaaagccaatctttattttctgtcgttacttttatgcaatcaaaccaatcaactacctagtggcaaaacaaaataacctttatacat 25486473  T
Q  123 cctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatat--ttttactacttcgatagtatttggt 206  Q
    |||   |||||||    |||||||||||||||||||| |||| ||||||||||||||||  |||||||||||| ||||| ||||||    
T  25486474 cctgaataataacgcctttgaattattgagattaaaaacagtccttgtgggaacgatattattttactacttcaatagtttttggt 25486559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 204
Target Start/End: Original strand, 37408901 - 37409102
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaa 102  Q
    |||||||| || | ||||| |||||||||||||||||| | | |||||  |||  || || ||||||||||| |||| ||||  ||||  ||||||||||    
T  37408901 tcgaaagacctaaactcatctctctcttattcttaaaatcaatctttattttctgtcattacttttatgcaaacaaaccaatcaactgtttagtggcaaa 37409000  T
Q  103 ttaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatt 202  Q
    | |||||||| ||||||||||||   | | ||| |||||||||||||||||||||||||| |  || || |||| ||||||||||||| || ||||||||    
T  37409001 tcaaaagaacttttatacatcctagcttacaacgtaattgaattattgagattaaaaccaatcattatgagaacaatatttttactacatccatagtatt 37409100  T
Q  203 tg 204  Q
    ||    
T  37409101 tg 37409102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 206
Target Start/End: Original strand, 27092114 - 27092320
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaa-ctttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaa 101  Q
    |||||||| |||| ||||| ||||| |||||||| |||||||  |||||  ||| ||| || |||||||||||||||| ||||  | || ||||||||||    
T  27092114 tcgaaagacctgatctcatctctctattattctttaaaaccattctttactttctatcgttacttttatgcaatcaaaccaatcaattgtctagtggcaa 27092213  T
Q  102 attaaaagaa-catttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatat--ttttactacttcgatag 198  Q
    || || | || | |||||||||||| ||||||||| || |||||||||||||||||||| || ||||||||| ||| ||||  ||||||||||||||||     
T  27092214 atcaatataaacttttatacatcctatttaataacgtacttgaattattgagattaaaaacaattcttgtggaaac-atattattttactacttcgataa 27092312  T
Q  199 tatttggt 206  Q
    | ||||||    
T  27092313 tttttggt 27092320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 22416808 - 22416610
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaa 102  Q
    |||||||| || | ||||| |||||||||||||||||| | | |||||  |||  |  ||||||  |||||| |||| ||||  || |||||| |||||     
T  22416808 tcgaaagacctaaactcatctctctcttattcttaaaaccaatctttattttctgttattgctt--atgcaaacaaaacaatcaaccgcctagcggcaat 22416711  T
Q  103 ttaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatt 202  Q
    |||||||||| |||||||||| |   | | ||| |||||||||||||||||||||||||||| ||||| |||||||||  ||||||||||||||||||||    
T  22416710 ttaaaagaacttttatacatcttaagttacaacgtaattgaattattgagattaaaaccagtccttgt-ggaacgata--tttactacttcgatagtatt 22416614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 87 - 203
Target Start/End: Original strand, 52991002 - 52991118
Alignment:
Q  87 actgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatattttta 186  Q
    ||||||||||||||||| |||| ||| |||||||||| |  || | ||| ||||||||||||| ||||||||| |||  ||| |||| ||||||||||||    
T  52991002 actgcctagtggcaaatcaaaataacctttatacatcttaatttacaacgtaattgaattattaagattaaaatcagaccttatgggcacgatattttta 52991101  T
Q  187 ctacttcgatagtattt 203  Q
    |||||||| || |||||    
T  52991102 ctacttcggtaatattt 52991118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 164
Target Start/End: Original strand, 17141642 - 17141789
Alignment:
Q  17 ctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacattt 116  Q
    ||||| |||||||||||||||||| | | |||||  |||  || || ||||| ||||| |||| ||||  ||||  || |||||||| |||||||| |||    
T  17141642 ctcatctctctcttattcttaaaaccaatctttattttctgtcattacttttgtgcaaacaaaccaatcaactgtttaatggcaaatcaaaagaactttt 17141741  T
Q  117 atacatcctttttaataacataattgaattattgagattaaaaccagt 164  Q
    |||||||||  || | ||| ||||||| ||||||||||||||||||||    
T  17141742 atacatcctaatttacaacgtaattgatttattgagattaaaaccagt 17141789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 11190887 - 11190942
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || |||||| |||||||||||||||||||||||||||||||||||    
T  11190887 attgagattaatac-agttctcgtgggaacgatatttttactacttcgatagtattt 11190942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 50461383 - 50461325
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||| || ||| || ||||||||||||||||||||||||||||||||||||||    
T  50461383 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttggt 50461325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 539187 - 539242
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||||||    
T  539187 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtattt 539242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 2775855 - 2775910
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| ||||||||||||||||||||| ||||||||||||||||    
T  2775855 attgagattaacac-agtccttgtgggaacgatatttttattacttcgatagtattt 2775910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 2779097 - 2779152
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| ||||||||||||||||||||| ||||||||||||||||    
T  2779097 attgagattaacac-agtccttgtgggaacgatatttttattacttcgatagtattt 2779152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 7486932 - 7486987
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| ||||||||||||||||||||| ||||||||||||||||    
T  7486932 attgagattaacac-agtccttgtgggaacgatatttttattacttcgatagtattt 7486987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 10106433 - 10106378
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||||||    
T  10106433 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtattt 10106378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 24125860 - 24125915
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||||||    
T  24125860 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtattt 24125915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 30691096 - 30691151
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||||||    
T  30691096 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtattt 30691151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 35412866 - 35412921
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||||||    
T  35412866 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtattt 35412921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 203
Target Start/End: Original strand, 2873946 - 2873980
Alignment:
Q  169 gtgggaacgatatttttactacttcgatagtattt 203  Q
    |||||||||||||||||||||||||||||||||||    
T  2873946 gtgggaacgatatttttactacttcgatagtattt 2873980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 203
Target Start/End: Original strand, 6922902 - 6922936
Alignment:
Q  169 gtgggaacgatatttttactacttcgatagtattt 203  Q
    |||||||||||||||||||||||||||||||||||    
T  6922902 gtgggaacgatatttttactacttcgatagtattt 6922936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 201
Target Start/End: Original strand, 28266279 - 28266332
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtat 201  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||||    
T  28266279 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtat 28266332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 16184516 - 16184461
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||| ||||||||||||||||||||||||||||||    
T  16184516 attgagattaacac-agtcctcgtggaaacgatatttttactacttcgatagtattt 16184461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 203
Target Start/End: Original strand, 24129160 - 24129192
Alignment:
Q  171 gggaacgatatttttactacttcgatagtattt 203  Q
    |||||||||||||||||||||||||||||||||    
T  24129160 gggaacgatatttttactacttcgatagtattt 24129192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 43927210 - 43927265
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||| ||||||||||    
T  43927210 attgagattaacac-agtcctcgtgggaacgatatttttactactttgatagtattt 43927265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 203
Target Start/End: Complemental strand, 8461302 - 8461272
Alignment:
Q  173 gaacgatatttttactacttcgatagtattt 203  Q
    |||||||||||||||||||||||||||||||    
T  8461302 gaacgatatttttactacttcgatagtattt 8461272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 23298447 - 23298398
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgata 197  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||    
T  23298447 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgata 23298398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 199
Target Start/End: Original strand, 28327748 - 28327778
Alignment:
Q  169 gtgggaacgatatttttactacttcgatagt 199  Q
    |||||||||||||||||||||||||||||||    
T  28327748 gtgggaacgatatttttactacttcgatagt 28327778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 199
Target Start/End: Original strand, 28331073 - 28331103
Alignment:
Q  169 gtgggaacgatatttttactacttcgatagt 199  Q
    |||||||||||||||||||||||||||||||    
T  28331073 gtgggaacgatatttttactacttcgatagt 28331103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 203
Target Start/End: Original strand, 54724123 - 54724157
Alignment:
Q  169 gtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||||||||||||||||||||| |||||    
T  54724123 gtgggaacgatatttttactacttcgataatattt 54724157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 12541111 - 12541078
Alignment:
Q  170 tgggaacgatatttttactacttcgatagtattt 203  Q
    |||||||||||||||||||||||| |||||||||    
T  12541111 tgggaacgatatttttactacttcaatagtattt 12541078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 18641604 - 18641556
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgat 196  Q
    ||||||||||| || ||| || ||||||||||||||||||||||||||||    
T  18641604 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgat 18641556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 3e-47; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 17 - 207
Target Start/End: Complemental strand, 27354917 - 27354726
Alignment:
Q  17 ctcatttctctcttattcttaaaaaccaa-ctttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatt 115  Q
    ||||| ||||| ||||||||||||||||| |||||  |||  || || ||||||||||| |||||||||  ||||||||||||||||| |||||||| ||    
T  27354917 ctcatctctcttttattcttaaaaaccaatctttattttctgtcattacttttatgcaaacaaatcaatcaactgcctagtggcaaatcaaaagaacttt 27354818  T
Q  116 tatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggtg 207  Q
    |||||||||| |||   ||||||||||||||||||||||||||| || |  | |||||||||||||||||||||||||||||||||||||||    
T  27354817 tatacatcctattttgcaacataattgaattattgagattaaaaacaatcatcgtgggaacgatatttttactacttcgatagtatttggtg 27354726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 204
Target Start/End: Complemental strand, 905658 - 905471
Alignment:
Q  17 ctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacattt 116  Q
    ||||| ||||| |||||||| |||||||||||||  ||  ||| || ||||||||||| |||| ||||  | ||||||||| ||||| |||| ||| |||    
T  905658 ctcatctctcttttattctttaaaaccaactttactttttatcgttacttttatgcaaacaaaccaatcaaatgcctagtgtcaaatcaaaataactttt 905559  T
Q  117 atacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttg 204  Q
    |||||||||   | | ||| |||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||    
T  905558 atacatcctaacttacaacgtaattgaattattgagattataatcagtccttgtgggaacgatatttttactacttcgatagtatttg 905471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 673043 - 672861
Alignment:
Q  17 ctcatttctctcttattcttaaaaaccaa-ctttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatt 115  Q
    ||||| |||||||||||||| |||||||| |||||  ||   || || ||||||| |||||||| ||||  ||||||||||| ||||  |||||||| ||    
T  673043 ctcatctctctcttattctttaaaaccaatctttattttatgtcgttacttttatccaatcaaaccaatcaactgcctagtgacaaaacaaaagaacctt 672944  T
Q  116 tatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagt 199  Q
    |||||||||| ||||||||| || ||||||| |||||||||||| || | ||||||||||| ||| ||||||||||||||||||    
T  672943 tatacatcctatttaataacgtacttgaattgttgagattaaaaacaatccttgtgggaacaata-ttttactacttcgatagt 672861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 70 - 203
Target Start/End: Complemental strand, 1950370 - 1950238
Alignment:
Q  70 tgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttg 169  Q
    |||||||||| ||||  ||||||||||||||| | |||||||| |||||||||| |   || | || | ||||    ||||||||||| || ||| || |    
T  1950370 tgcaatcaaaccaatcaactgcctagtggcaattcaaaagaacttttatacatcttaaatatttactttattgctaaattgagattaacac-agtcctcg 1950272  T
Q  170 tgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||||||||||||||||||||||||||    
T  1950271 tgggaacgatatttttactacttcgatagtattt 1950238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 20448109 - 20448164
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||    
T  20448109 attgagattaacac-agtccttgtgggaacgatatttttactacttcgatagtattt 20448164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 20533876 - 20533931
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||    
T  20533876 attgagattaacac-agtccttgtgggaacgatatttttactacttcgatagtattt 20533931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 45960592 - 45960534
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||| || ||| || ||||||||||||||||||||||||||||||||||||||    
T  45960592 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttggt 45960534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 2794504 - 2794559
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||||||    
T  2794504 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtattt 2794559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 20399130 - 20399185
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || |||||| ||||||||||||||||||||||||| |||||||||    
T  20399130 attgagattaacac-agttctcgtgggaacgatatttttactacttccatagtattt 20399185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 28111333 - 28111388
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||||||    
T  28111333 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtattt 28111388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 3796674 - 3796616
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||| || ||| || |||||||| |||||||||||||||||||||||||||||    
T  3796674 attgagattaacac-agtcctcgtgggaacaatatttttactacttcgatagtatttggt 3796616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 31205114 - 31205172
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||| || ||| || ||||||||||||||||||||||||| ||||||||||||    
T  31205114 attgagattaacac-agtcctcgtgggaacgatatttttactacttcaatagtatttggt 31205172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 199
Target Start/End: Original strand, 33898621 - 33898659
Alignment:
Q  161 cagttcttgtgggaacgatatttttactacttcgatagt 199  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  33898621 cagtccttgtgggaacgatatttttactacttcgatagt 33898659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 23021745 - 23021712
Alignment:
Q  170 tgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||||||||||||||||||||||||||    
T  23021745 tgggaacgatatttttactacttcgatagtattt 23021712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 27536378 - 27536323
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || ||| |||||||||||||||||||||||||||||||    
T  27536378 attgagattaacac-agtcctcgtgtgaacgatatttttactacttcgatagtattt 27536323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 199
Target Start/End: Complemental strand, 23441098 - 23441068
Alignment:
Q  169 gtgggaacgatatttttactacttcgatagt 199  Q
    |||||||||||||||||||||||||||||||    
T  23441098 gtgggaacgatatttttactacttcgatagt 23441068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 203
Target Start/End: Complemental strand, 49498327 - 49498293
Alignment:
Q  169 gtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||||||||||||||||||| |||||||    
T  49498327 gtgggaacgatatttttactacttcgacagtattt 49498293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 1e-46; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 206
Target Start/End: Original strand, 30392717 - 30392906
Alignment:
Q  17 ctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaattaaaag-aacatt 115  Q
    ||||| |||||||||||||||||| |||||||||  |||  || || |||||||||||||||| ||||  ||||||||||||||||| ||||  ||| ||    
T  30392717 ctcatctctctcttattcttaaaa-ccaactttactttctgtcgttacttttatgcaatcaaaccaatcaactgcctagtggcaaatcaaaaataacttt 30392815  T
Q  116 tatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||   | | ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  30392816 tatacatcctaacttacaacgtaattgaattattgagattaaaaccagtccttgtgggaacgatatttttactacttcgatagtatttggt 30392906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 206
Target Start/End: Complemental strand, 53009531 - 53009343
Alignment:
Q  17 ctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacattt 116  Q
    ||||| |||||||||||||||||| | | |||||| |||  || || ||||||||||| |||| ||||  ||||||||||||||| | |||||||  |||    
T  53009531 ctcatctctctcttattcttaaaaccaatctttaatttctgtcattacttttatgcaaacaaaccaatcaactgcctagtggcaa-tcaaaagaaatttt 53009433  T
Q  117 atacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||||||||   | | ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  53009432 atacatcctaacttacaacgtaattgaattattgagattaaaaccagtccttgtgggaacgatatttttactaattcgatagtatttggt 53009343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 206
Target Start/End: Original strand, 25962251 - 25962393
Alignment:
Q  64 cttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccag 163  Q
    ||||||||||| |||| |||| |||||||||||||||||| |||||||| ||||||||||||   | | ||| || |||||||||||| ||||||||||     
T  25962251 cttttatgcaaacaaaccaatctactgcctagtggcaaatcaaaagaacttttatacatcctaacttacaacgtagttgaattattgaaattaaaaccac 25962350  T
Q  164 ttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    | |||||||||||||||||||||||||||||||||||||||||    
T  25962351 tccttgtgggaacgatatttttactacttcgatagtatttggt 25962393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 46955383 - 46955273
Alignment:
Q  87 actgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatattttta 186  Q
    |||||||||||||||| ||||||||||||||||||||||  || | ||| ||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  46955383 actgcctagtggcaaactaaaagaacatttatacatcctaatttacaacgtaattgaattattgagattaaaatcagtccttgtgggaacgatattttta 46955284  T
Q  187 ctacttcgata 197  Q
    |||||||||||    
T  46955283 ctacttcgata 46955273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 18673007 - 18672869
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||||||||  ||||||||| |||||||||||||||| |||||||||| |   | | ||| |||||||||||||||||||||||||| | |    
T  18673007 ttatgcaaacaaatcaatcaactgcctagcggcaaattaaaagaacttttatacatcttaagttacaacgtaattgaattattgagattaaaaccaatcc 18672908  T
Q  167 ttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  18672907 ttgt-ggaacgatatttttactacttcgatagtatttggt 18672869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 40493354 - 40493154
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaa 102  Q
    |||||||| || | ||||| |||||||||||||||||| | | |||||| ||  || ||  |||||||| || |||| ||||  ||||||||||||||||    
T  40493354 tcgaaagacctaaactcatatctctcttattcttaaaaccgatctttaattt--atgtta-cttttatgtaaacaaaccaatcaactgcctagtggcaaa 40493258  T
Q  103 ttaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatt 202  Q
    | |||||||| ||||||||||||   | | ||| || |||||||||||||||||||| ||||  |||| |||||||||||||||||||||| ||||||||    
T  40493257 tcaaaagaacttttatacatcctaacttacaacgtagttgaattattgagattaaaatcagtcattgtaggaacgatatttttactacttcaatagtatt 40493158  T
Q  203 tggt 206  Q
    ||||    
T  40493157 tggt 40493154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 204
Target Start/End: Original strand, 21419923 - 21420121
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaa 102  Q
    |||||||| || | ||||| |||||||||||||||||| | | |||||| |||  |   | ||||||||||| |||| ||||  |||||||||||| |||    
T  21419923 tcgaaagacctaaactcatctctctcttattcttaaaatcaatctttaatttctgt---tacttttatgcaaacaaaccaataaactgcctagtggaaaa 21420019  T
Q  103 ttaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatt 202  Q
    | |||||||| ||||||||||     | | ||| || ||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||    
T  21420020 tcaaaagaacttttatacatcaaaacttacaacgtagttgaattattgagattaaaaccaatccttgtggaaacgatatttttactacttcgatagtatt 21420119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 29544861 - 29544658
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaa 102  Q
    |||||||| || | ||||| |||||||||||||||||| | | |||||  ||   || || |||||||||||||||| ||||  ||||||||||||||||    
T  29544861 tcgaaagacctaaactcatatctctcttattcttaaaatcaacctttactttttgtcgttacttttatgcaatcaaaccaatcaactgcctagtggcaaa 29544762  T
Q  103 ttaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatt 202  Q
    | |||| | | ||| ||||||||   | | ||| ||||||||| ||||||||| |||||||| ||| ||||||| ||||||||| |||||||||||||||    
T  29544761 tcaaaatagcttttgtacatcctaacttacaacgtaattgaatgattgagatttaaaccagtccttatgggaacaatatttttattacttcgatagtatt 29544662  T
Q  203 tggt 206  Q
    ||||    
T  29544661 tggt 29544658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 139 - 206
Target Start/End: Original strand, 11195940 - 11196007
Alignment:
Q  139 attgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  11195940 attgaatgattgagattaaaaccagtccttatgggaacgatatttttactacttcgatagtatttggt 11196007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 204
Target Start/End: Original strand, 15164418 - 15164530
Alignment:
Q  91 cctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactac 190  Q
    ||||||||||||| |||| ||| |||||||||||| ||||||||| || | ||||| ||||||||||||  ||| ||||| ||||||||| |||||||||    
T  15164418 cctagtggcaaatcaaaataacctttatacatcctatttaataacgtagtagaattgttgagattaaaaatagtccttgtaggaacgata-ttttactac 15164516  T
Q  191 ttcgatagtatttg 204  Q
    ||||||||| ||||    
T  15164517 ttcgatagtttttg 15164530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 29325098 - 29325156
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||| || ||| || ||||||||||||||||||||||||||||||||||||||    
T  29325098 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttggt 29325156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 40616653 - 40616595
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||| || ||| || ||||||||||||||||||||||||||||||||||||||    
T  40616653 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttggt 40616595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 52530780 - 52530722
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||| || ||| || ||||||||||||||||||||||||||||||||||||||    
T  52530780 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttggt 52530722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 34319764 - 34319709
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||||||    
T  34319764 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtattt 34319709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 40902920 - 40902865
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||||||    
T  40902920 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtattt 40902865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 44808802 - 44808747
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||||||    
T  44808802 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtattt 44808747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 24150949 - 24151007
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||| || ||| || |||||||| |||||||||||||||||||||||||||||    
T  24150949 attgagattaacac-agtcctcgtgggaacaatatttttactacttcgatagtatttggt 24151007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 38283326 - 38283268
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||| || ||| || |||||||| |||||||||||||||||||||||||||||    
T  38283326 attgagattaacac-agtcctcgtgggaacaatatttttactacttcgatagtatttggt 38283268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 203
Target Start/End: Original strand, 48637803 - 48637837
Alignment:
Q  169 gtgggaacgatatttttactacttcgatagtattt 203  Q
    |||||||||||||||||||||||||||||||||||    
T  48637803 gtgggaacgatatttttactacttcgatagtattt 48637837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 5670852 - 5670907
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || ||||||||||||||||||||||||||||| |||||    
T  5670852 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgataatattt 5670907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 5673170 - 5673225
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || ||||||||||||||||||||||||||||| |||||    
T  5673170 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgataatattt 5673225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 18911781 - 18911836
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||| ||||||||||||||||||||||||||||||    
T  18911781 attgagattaacac-agtcctcgtggaaacgatatttttactacttcgatagtattt 18911836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 34017607 - 34017575
Alignment:
Q  171 gggaacgatatttttactacttcgatagtattt 203  Q
    |||||||||||||||||||||||||||||||||    
T  34017607 gggaacgatatttttactacttcgatagtattt 34017575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 203
Target Start/End: Original strand, 12238555 - 12238589
Alignment:
Q  169 gtgggaacgatatttttactacttcgatagtattt 203  Q
    |||||||||||||||||||||||||||| ||||||    
T  12238555 gtgggaacgatatttttactacttcgatggtattt 12238589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 207
Target Start/End: Original strand, 1388101 - 1388204
Alignment:
Q  105 aaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatat--ttttactacttcgatagtatt 202  Q
    |||| ||| |||||||||||| ||||||||    ||||||||||||||||||| | |||| ||||| | |||||| |  ||||| |||||||||| ||||    
T  1388101 aaaataacttttatacatcctatttaataaagctattgaattattgagattaaca-cagtccttgttgaaacgatcttattttattacttcgataatatt 1388199  T
Q  203 tggtg 207  Q
    |||||    
T  1388200 tggtg 1388204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 5706669 - 5706717
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgat 196  Q
    ||||||||||| || ||| || ||||||||||||||||||||||||||||    
T  5706669 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgat 5706717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 37103132 - 37103079
Alignment:
Q  70 tgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatc 123  Q
    |||||||||| ||||  ||||||||||||||| | |||||||| ||||||||||    
T  37103132 tgcaatcaaaccaatcaactgcctagtggcaattcaaaagaacttttatacatc 37103079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 15432356 - 15432411
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || ||||||||||||||||||| ||||||||| |||||    
T  15432356 attgagattaacac-agtcctcgtgggaacgatatttttacaacttcgataatattt 15432411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 27014537 - 27014592
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||| ||||||||||||||||||||||| ||||||    
T  27014537 attgagattaacac-agtcctcgtggtaacgatatttttactacttcgatggtattt 27014592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 27676892 - 27676837
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || |||| | || |||||||||||||||||||||||||| |||||    
T  27676892 attgagattaacac-agttttcgtaggaacgatatttttactacttcgataatattt 27676837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 8e-45; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 3067969 - 3067766
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaa 102  Q
    |||||||| || | ||||| |||||||||||||||||| | | |||||||||   || || ||||||||||| |||| ||||  | ||||||||||||||    
T  3067969 tcgaaagacctaaactcatgtctctcttattcttaaaaccaatctttaaattttgtcattacttttatgcaaacaaaccaatcaaatgcctagtggcaaa 3067870  T
Q  103 ttaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatt 202  Q
    | |||||||| ||||||||||||   | | ||| |||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||    
T  3067869 tcaaaagaacttttatacatcctaacttacaacgtaattgaattattgagattaaaacaaatccttgtgggaacgatatttttactacttcgatagtatt 3067770  T
Q  203 tggt 206  Q
    ||||    
T  3067769 tggt 3067766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 199
Target Start/End: Original strand, 13842762 - 13842956
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaa 102  Q
    |||||||| |||| ||||| |||||||||||||||||| | | |||||  |||  |  || |||  |||||| |||||||||  ||||||||||||||||    
T  13842762 tcgaaagacctgatctcatctctctcttattcttaaaaccaatctttattttctgttatttctt--atgcaaacaaatcaatcaactgcctagtggcaaa 13842859  T
Q  103 ttaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagt 199  Q
    |||||||||| |||||| |||||  || | ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13842860 ttaaaagaacctttatatatcctaatttacaacgtaattgaattattgagattaaaaccagtccttgtgggaacgatatttttactacttcgatagt 13842956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 3 - 204
Target Start/End: Original strand, 10469266 - 10469467
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaa 102  Q
    ||||||||||| | ||||| |||||||||||||||||| | | |||||  ||   |  || ||||||||||| |||| ||||  |||||||||||| |||    
T  10469266 tcgaaagatctaaactcatctctctcttattcttaaaatcaatctttactttttgttgttacttttatgcaaacaaaccaatcaactgcctagtggaaaa 10469365  T
Q  103 ttaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatt 202  Q
    | |||| ||| ||||||||||||   | | ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10469366 tcaaaataacttttatacatcctaacttacaacgtaattgaattattgagattaaaaccagtccttgtgggaacgatatttttactacttcgatagtatt 10469465  T
Q  203 tg 204  Q
    ||    
T  10469466 tg 10469467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 206
Target Start/End: Complemental strand, 20080696 - 20080507
Alignment:
Q  17 ctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacattt 116  Q
    ||||| |||||||||||||||||| |   |||||  |||  || || ||||||||||| |||| ||||  ||||||||||||||||| |||||||| |||    
T  20080696 ctcatctctctcttattcttaaaaccattctttattttctgtcattacttttatgcaaacaaaccaatcaactgcctagtggcaaatcaaaagaactttt 20080597  T
Q  117 atacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||||||||   | | ||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||    
T  20080596 atacatcctaacttacaacgtaattgaattattgagattaaaatcagtcattgtgggaacgatatttttactacttcgatagtatttggt 20080507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 37166077 - 37165938
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||| ||||  |||||||||||||||||||||||||| ||||||||||||  || | ||| |||||||||||||| ||||||||||||| |    
T  37166077 ttatgcaaacaaaccaatcaactgcctagtggcaaattaaaagaacctttatacatcctaatttacaacgtaattgaattattgtgattaaaaccagtcc 37165978  T
Q  167 ttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    || ||| |||||||||||||||||||||||||||||||||    
T  37165977 ttatggaaacgatatttttactacttcgatagtatttggt 37165938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 26136058 - 26135920
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||||||||  ||||||||| |||||||||||||||| |||||||||| |   | | ||| |||||||||||||||||||||||||||| |    
T  26136058 ttatgcaaacaaatcaatcaactgcctagcggcaaattaaaagaacctttatacatcttaagttacaacgtaattgaattattgagattaaaaccagtcc 26135959  T
Q  167 ttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  26135958 ttgt-ggaacgatatttttactacttcgatagtatttggt 26135920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 14683436 - 14683231
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaa 102  Q
    |||||||| |||| ||||| ||||| |||||||||||| | | |||||  ||   ||||| ||||||||||| |||||||||  ||||||||||||||||    
T  14683436 tcgaaagacctgatctcatctctcttttattcttaaaaccaatctttattttttgtctttacttttatgcaaacaaatcaatcaactgcctagtggcaaa 14683337  T
Q  103 ttaaaagaacatttataca--tcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagta 200  Q
      |||| ||| ||||||||  ||||  || | ||| ||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||| |||    
T  14683336 acaaaataacttttatacacatcctagtttacaacgtaattgaattattgagattaaaatcagtccttgtgggaacgatatttttagtacttcgatggta 14683237  T
Q  201 tttggt 206  Q
    ||||||    
T  14683236 tttggt 14683231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 64 - 206
Target Start/End: Complemental strand, 9132694 - 9132552
Alignment:
Q  64 cttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccag 163  Q
    |||||||||||||||| ||||  ||||||||||||||||| |||| ||| | |||| |||||   | | ||| ||||||||||||| |||||||||| ||    
T  9132694 cttttatgcaatcaaaccaatcaactgcctagtggcaaatcaaaataacttatatatatcctaacttacaacgtaattgaattatttagattaaaactag 9132595  T
Q  164 ttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    | ||||||||||||||||||||||||||| |||||||||||||    
T  9132594 tccttgtgggaacgatatttttactactttgatagtatttggt 9132552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 164
Target Start/End: Complemental strand, 26144438 - 26144341
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagt 164  Q
    |||||||| |||||||||  ||| ||||| |||||||||||||||| |||||||||| |   | | ||| ||||||||||||||||||||||||||||    
T  26144438 ttatgcaaacaaatcaatcaacttcctagcggcaaattaaaagaacttttatacatcttaagttacaacgtaattgaattattgagattaaaaccagt 26144341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 20595999 - 20595935
Alignment:
Q  140 ttgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttg 204  Q
    |||||||||||| ||||||||||||  |||||||||||| ||||||||||||| |||||||||||    
T  20595999 ttgaattattgaaattaaaaccagtcattgtgggaacgaaatttttactacttagatagtatttg 20595935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 16166011 - 16166069
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||    
T  16166011 attgagattaacac-agtccttgtgggaacgatatttttactacttcgatagtatttggt 16166069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 6603720 - 6603778
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||| || ||| || ||||||||||||||||||||||||||||||||||||||    
T  6603720 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttggt 6603778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 206
Target Start/End: Complemental strand, 13449610 - 13449573
Alignment:
Q  169 gtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13449610 gtgggaacgatatttttactacttcgatagtatttggt 13449573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 4543069 - 4543124
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||||||    
T  4543069 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtattt 4543124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 37415273 - 37415218
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||||||    
T  37415273 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtattt 37415218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 2441199 - 2441144
Alignment:
Q  70 tgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcct 125  Q
    |||||||||| ||||  ||||||||||||||| ||||||||| |||||||||||||    
T  2441199 tgcaatcaaaccaatcaactgcctagtggcaatttaaaagaaaatttatacatcct 2441144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 8277259 - 8277317
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||| || ||| || |||| |||||||||||||||||||||||||||||||||    
T  8277259 attgagattaacac-agtcctcgtggtaacgatatttttactacttcgatagtatttggt 8277317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 203
Target Start/End: Complemental strand, 45286895 - 45286864
Alignment:
Q  172 ggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||||||||||||||||||||||||    
T  45286895 ggaacgatatttttactacttcgatagtattt 45286864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 203
Target Start/End: Original strand, 4547162 - 4547196
Alignment:
Q  169 gtgggaacgatatttttactacttcgatagtattt 203  Q
    |||||||| ||||||||||||||||||||||||||    
T  4547162 gtgggaacaatatttttactacttcgatagtattt 4547196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 203
Target Start/End: Complemental strand, 23224734 - 23224700
Alignment:
Q  169 gtgggaacgatatttttactacttcgatagtattt 203  Q
    |||||| ||||||||||||||||||||||||||||    
T  23224734 gtgggagcgatatttttactacttcgatagtattt 23224700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 199
Target Start/End: Complemental strand, 44017606 - 44017576
Alignment:
Q  169 gtgggaacgatatttttactacttcgatagt 199  Q
    |||||||||||||||||||||||||||||||    
T  44017606 gtgggaacgatatttttactacttcgatagt 44017576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 5e-43; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 3 - 206
Target Start/End: Original strand, 24400316 - 24400517
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaa 102  Q
    |||||||| || | ||||| |||||||||||||||||| | | |||||  |||  |  ||||||  |||||| |||| ||||  ||||||||| ||||||    
T  24400316 tcgaaagacctaaactcatctctctcttattcttaaaatcaatctttattttctgttattgctt--atgcaaacaaaccaatcaactgcctagcggcaaa 24400413  T
Q  103 ttaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatt 202  Q
    |||||||||| ||||||||||||   | | ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24400414 ttaaaagaacctttatacatcctaagttacaacgtaattgaattattgagattaaaaccagtccttgtgggaacgatatttttactacttcgatagtatt 24400513  T
Q  203 tggt 206  Q
    ||||    
T  24400514 tggt 24400517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 19476201 - 19476340
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||| ||||  ||||||||| |||||||||||||||| ||||||||||||  || | ||| ||||||||||||||||||||||| |||| |    
T  19476201 ttatgcaaacaaaccaatcaactgcctagcggcaaattaaaagaacctttatacatcctaatttacaacgtaattgaattattgagattaaaatcagtcc 19476300  T
Q  167 ttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  19476301 ttgtgggaacgatatttttactacttcgatagtatttggt 19476340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 206
Target Start/End: Original strand, 24410435 - 24410636
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaa 102  Q
    |||||||| || | ||||| |||||||||||||||||| | | |||||  |||  |  ||||||  |||||| |||| ||||  ||||||||| ||||||    
T  24410435 tcgaaagacctaaactcatctctctcttattcttaaaaccaatctttattttctgttattgctt--atgcaaacaaaccaatcaactgcctagcggcaaa 24410532  T
Q  103 ttaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatt 202  Q
    |||||||||| |||||| |||||   | | ||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24410533 ttaaaagaacctttatatatcctaagttacaacgtaattgaattgttgagattaaaaccagtccttgtgggaacgatatttttactacttcgatagtatt 24410632  T
Q  203 tggt 206  Q
    ||||    
T  24410633 tggt 24410636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 3 - 202
Target Start/End: Original strand, 4512613 - 4512811
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaa 102  Q
    |||||||| || | ||||| |||||||||||||||||| |||||||||  ||   || ||  ||||||||||||||| ||||  ||||||||||||||||    
T  4512613 tcgaaagacctaaactcatctctctcttattcttaaaa-ccaactttactttatttcgttaattttatgcaatcaaaccaatcaactgcctagtggcaaa 4512711  T
Q  103 ttaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatt 202  Q
    | |||| ||| ||| ||||||||   | | ||| ||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  4512712 taaaaataacttttgtacatcctaacttacaacgtaattgaattattgaaattaaaatcagtccttgtgggaacgatatttttactacttcgatagtatt 4512811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 7128498 - 7128636
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||||||||  ||||||||| |||||||||||||||| |||||||||| |   | | ||| |||||||||||||||||||||||||||| |    
T  7128498 ttatgcaaacaaatcaatcaactgcctagcggcaaattaaaagaacttttatacatcttaagttacaacgtaattgaattattgagattaaaaccagtcc 7128597  T
Q  167 ttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  7128598 ttgt-ggaacgatatttttactacttcgatagtatttggt 7128636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 24155291 - 24155152
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||| ||||  ||||||||| | |||||||||||||| ||||||||||||  || | ||| |||||||||||||||||||||||||| | |    
T  24155291 ttatgcaaacaaaccaatcaactgcctagcgacaaattaaaagaacctttatacatcctaatttacaacgtaattgaattattgagattaaaaccaatcc 24155192  T
Q  167 ttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    || |||||||||||||||||||||||||||||||||||||    
T  24155191 ttatgggaacgatatttttactacttcgatagtatttggt 24155152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 28230795 - 28230933
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||||||||  |||| |||| |||||||||||||||| |||||||||| |   | | ||| ||||||||||||||||||||||| |||| |    
T  28230795 ttatgcaaacaaatcaatcaactgtctagcggcaaattaaaagaacttttatacatcttaagttacaacgtaattgaattattgagattaaaatcagtcc 28230894  T
Q  167 ttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  28230895 ttgtgg-aacgatatttttactacttcgatagtatttggt 28230933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 18855950 - 18855812
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||| ||||  ||||||||| ||| |||||||||||| |||||||||| |   | | |||  ||||||||||||||||||||||||||| |    
T  18855950 ttatgcaaacaaaccaatcaactgcctagcggccaattaaaagaacttttatacatcttaagttacaacggaattgaattattgagattaaaaccagtcc 18855851  T
Q  167 ttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  18855850 ttgtgg-aacgatatttttactacttcgatagtatttggt 18855812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 87 - 206
Target Start/End: Complemental strand, 26896162 - 26896043
Alignment:
Q  87 actgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatattttta 186  Q
    |||||||||||| |||| |||| ||| | ||||||||||   | | ||| |||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  26896162 actgcctagtggaaaatcaaaataacttctatacatcctaacttacaacgtaattgaactattgagattaaaaccagtccctgtgggaacgatattttta 26896063  T
Q  187 ctacttcgatagtatttggt 206  Q
    |||||| |||||||||||||    
T  26896062 ctactttgatagtatttggt 26896043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 206
Target Start/End: Original strand, 32109805 - 32110009
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaa 102  Q
    |||||||| |||| ||||| ||||| |||||||||||| | | |||||  |||  || || |||||| ||||||||| | ||  ||| ||||||||||||    
T  32109805 tcgaaagacctgatctcatctctcttttattcttaaaaccaatctttattttctgtcgttacttttacgcaatcaaacccatcaacttcctagtggcaaa 32109904  T
Q  103 ttaaaagaacatttat-acatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtat 201  Q
      |||| ||| ||| | |||||||   ||||||| |||| ||||| | |||||||||| |||| |||||||| ||||||||||||||||||||||||| |    
T  32109905 acaaaataaccttttttacatcctaagtaataacgtaatagaattgtggagattaaaaacagtccttgtgggtacgatatttttactacttcgatagttt 32110004  T
Q  202 ttggt 206  Q
    |||||    
T  32110005 ttggt 32110009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 13947217 - 13947351
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||| ||||  ||||||||| |||||||||||||||| |||||    | |   | | ||| ||||||||||||||||||||||| |||| |    
T  13947217 ttatgcaaacaaaccaatcaactgcctagcggcaaattaaaagaacttttat----cttaagttacaacgtaattgaattattgagattaaaatcagtcc 13947312  T
Q  167 ttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  13947313 ttgtgg-aacgatatttttactacttcgatagtatttggt 13947351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 11125598 - 11125489
Alignment:
Q  89 tgcctagtggcaaattaaaagaa-catttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttac 187  Q
    ||||||||||||||| |||| || | ||| ||||||||   ||||||  || | ||||| |||||||||||| |||| |||||||||| |||||||||||    
T  11125598 tgcctagtggcaaatcaaaataatcttttttacatcctaagtaataatgtactagaattgttgagattaaaaacagtccttgtgggaatgatatttttac 11125499  T
Q  188 tacttcgata 197  Q
    ||||||||||    
T  11125498 tacttcgata 11125489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 2379528 - 2379565
Alignment:
Q  169 gtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2379528 gtgggaacgatatttttactacttcgatagtatttggt 2379565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 3596607 - 3596571
Alignment:
Q  167 ttgtgggaacgatatttttactacttcgatagtattt 203  Q
    |||||||||||||||||||||||||||||||||||||    
T  3596607 ttgtgggaacgatatttttactacttcgatagtattt 3596571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 9954239 - 9954294
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||||||    
T  9954239 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtattt 9954294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 11729177 - 11729122
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || |||| |||||||||||||||||||| ||||||||||||||||    
T  11729177 attgagattaacac-agtttttgtgggaacgatatttttattacttcgatagtattt 11729122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 30655734 - 30655789
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| ||||||||||||||||||||| ||||||||||||||||    
T  30655734 attgagattaacac-agtccttgtgggaacgatatttttattacttcgatagtattt 30655789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 22561087 - 22560944
Alignment:
Q  64 cttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccag 163  Q
    |||||||||||||||| ||||  ||||||||| || |||  |||| ||| |||||||| |||   |||||||   ||||||||||||||||||| |  ||    
T  22561087 cttttatgcaatcaaaccaatcaactgcctag-ggtaaaacaaaataacttttatacagcctaaataataacgctattgaattattgagattaaca-gag 22560990  T
Q  164 ttcttgtgggaacgatat--ttttactacttcgatagtatttggtg 207  Q
    | |||||||||||||| |  ||||| ||||||||||||| ||||||    
T  22560989 tccttgtgggaacgatcttattttattacttcgatagtaattggtg 22560944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 1125560 - 1125527
Alignment:
Q  170 tgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||||||||||||||||||||||||||    
T  1125560 tgggaacgatatttttactacttcgatagtattt 1125527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 11188045 - 11187989
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatattttt-actacttcgatagtattt 203  Q
    ||||||||||| || ||| |||||||||||||||||||| ||||||||||||||||||    
T  11188045 attgagattaacac-agtccttgtgggaacgatattttttactacttcgatagtattt 11187989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 5737909 - 5737854
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| |||| || ||||||||||||||||||||||||||||||    
T  5737909 attgagattaacac-agtccttgcggaaacgatatttttactacttcgatagtattt 5737854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 23382017 - 23381962
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||| ||||||||||||||||    
T  23382017 attgagattaacac-agtcctcgtgggaacgatatttttattacttcgatagtattt 23381962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 203
Target Start/End: Complemental strand, 23384576 - 23384542
Alignment:
Q  169 gtgggaacgatatttttactacttcgatagtattt 203  Q
    |||||||||||||||||| ||||||||||||||||    
T  23384576 gtgggaacgatatttttattacttcgatagtattt 23384542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 203
Target Start/End: Complemental strand, 26942259 - 26942225
Alignment:
Q  169 gtgggaacgatatttttactacttcgatagtattt 203  Q
    |||||||| ||||||||||||||||||||||||||    
T  26942259 gtgggaacaatatttttactacttcgatagtattt 26942225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 7e-42; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 38 - 206
Target Start/End: Complemental strand, 26907372 - 26907202
Alignment:
Q  38 aaaaccaa-ctttaaattcaatctttgcttttatgcaatcaaatc-aatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataac 135  Q
    |||||||| |||||| ||| ||| || ||||||||||| |||| | |||  ||||||||||||||||| |||||||| ||||||||||||   | | |||    
T  26907372 aaaaccaatctttaatttctatcattacttttatgcaaacaaaaccaatcaactgcctagtggcaaatcaaaagaacttttatacatcctaacttacaac 26907273  T
Q  136 ataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
     |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26907272 gtaattgaattattgagattaaaaccagtccttgtgggaacgatatttttactacttcgatagtatttggt 26907202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 17 - 206
Target Start/End: Original strand, 23044291 - 23044479
Alignment:
Q  17 ctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacattt 116  Q
    ||||| |||||||||||||| ||||||||||| |  ||   || || ||||||||||| |||| ||||  ||||||||||||||||| |||| ||| |||    
T  23044291 ctcatctctctcttattctttaaaaccaactt-actttttgtcgttacttttatgcaaacaaaccaatcaactgcctagtggcaaatcaaaataactttt 23044389  T
Q  117 atacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||| || || ||| | ||| ||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  23044390 ataaattctattttacaacgtaattgaattattgagattaaaatcagtccttatgggaacgatatttttactacttcgatagtatttggt 23044479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 17 - 206
Target Start/End: Original strand, 26292939 - 26293127
Alignment:
Q  17 ctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacattt 116  Q
    ||||| |||||||||||||||||| |||||||||  ||   || || |||||||||||||||| ||||  ||||||||||||||||| |||||||| |||    
T  26292939 ctcatctctctcttattcttaaaa-ccaactttactttttgtcattacttttatgcaatcaaaccaatcaactgcctagtggcaaatcaaaagaactttt 26293037  T
Q  117 atacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||| |  || | ||  |||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||| |||| ||||||||    
T  26293038 atacatcttaatttacaatgtaattgaattattgagattaaaaccagtacttatgggaacaatatttttactactttgatattatttggt 26293127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 87 - 205
Target Start/End: Complemental strand, 11959097 - 11958979
Alignment:
Q  87 actgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatattttta 186  Q
    ||||||||||||||||| |||||||| ||||||||||||  || | ||| ||||||||||||||||||||||| |||| ||||| |||| ||||||||||    
T  11959097 actgcctagtggcaaatcaaaagaacctttatacatcctaatttacaacgtaattgaattattgagattaaaatcagtccttgtaggaatgatattttta 11958998  T
Q  187 ctacttcgatagtatttgg 205  Q
    |||||||||||||||||||    
T  11958997 ctacttcgatagtatttgg 11958979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 206
Target Start/End: Original strand, 17664741 - 17664889
Alignment:
Q  58 tctttgcttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaa 157  Q
    ||||| ||||||||||| |||||||||  ||||||||||||||||  |||| ||| |||||||||| |  || | ||  |||||||||||||||||||||    
T  17664741 tctttacttttatgcaaacaaatcaatcaactgcctagtggcaaaacaaaataacttttatacatcttagtttacaatgtaattgaattattgagattaa 17664840  T
Q  158 aaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    || |||| |||||| ||||||||||||||||||||||||| ||||||||    
T  17664841 aatcagtccttgtgagaacgatatttttactacttcgataatatttggt 17664889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 12088155 - 12088293
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||| ||||  || |||||| ||||| |||||||||| |||||||||| |   | | ||| ||||||||||||||||||||||||||||||    
T  12088155 ttatgcaaacaaaacaatcaaccgcctagcggcaatttaaaagaacttttatacatcttaagttacaacgtaattgaattattgagattaaaaccagttc 12088254  T
Q  167 ttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  12088255 ttgt-ggaacgatatttttactacttcgatagtatttggt 12088293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 206
Target Start/End: Original strand, 18952830 - 18953034
Alignment:
Q  5 gaaagatctgacctcatttctctcttattcttaaaaaccaac-tttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaat 103  Q
    ||||||| ||| ||||| |||||||||||||| ||||||||| ||||  |||| |  || ||||||||||| | || ||||  | ||||||||||||||     
T  18952830 gaaagatttgatctcatctctctcttattctttaaaaccaacctttactttcagttgttacttttatgcaaacgaaccaatcaattgcctagtggcaaaa 18952929  T
Q  104 taaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatat--ttttactacttcgatagtat 201  Q
     |||| ||| |||||||||||| ||||||||| || ||||||| |||| ||||||| |||| ||||||||||||||||  ||||||||||| |||||| |    
T  18952930 caaaataacctttatacatcctatttaataacgtacttgaattgttgaaattaaaaacagtccttgtgggaacgatattattttactactttgatagttt 18953029  T
Q  202 ttggt 206  Q
    |||||    
T  18953030 ttggt 18953034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 67 - 198
Target Start/End: Original strand, 17748637 - 17748767
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||| ||||  ||||||||| |||||||||||||||| ||||||||||||  || | ||| | |||||||||||||||||||||||||| |    
T  17748637 ttatgcaaacaaaccaatcaactgcctagcggcaaattaaaagaacctttatacatcctaatttacaacgtgattgaattattgagattaaaaccagtcc 17748736  T
Q  167 ttgtgggaacgatatttttactacttcgatag 198  Q
    |||| |||||||||||||||||||||| ||||    
T  17748737 ttgt-ggaacgatatttttactacttcaatag 17748767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 34132908 - 34132770
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||| ||||  || |||||| ||||| |||||||||| |||||||||| |   | | ||| |||||||||||||||||||||||||||| |    
T  34132908 ttatgcaaacaaaacaatcaaccgcctagcggcaatttaaaagaacttttatacatcttaagttacaacgtaattgaattattgagattaaaaccagtcc 34132809  T
Q  167 ttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  34132808 ttgtgg-aacgatatttttactacttcgatagtatttggt 34132770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 34143139 - 34143001
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||| ||||  || |||||| ||||| |||||||||| |||||||||| |   | | ||| |||||||||||||||||||||||||||| |    
T  34143139 ttatgcaaacaaaacaatcaaccgcctagcggcaatttaaaagaacttttatacatcttaagttacaacgtaattgaattattgagattaaaaccagtcc 34143040  T
Q  167 ttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  34143039 ttgtgg-aacgatatttttactacttcgatagtatttggt 34143001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 67 - 203
Target Start/End: Complemental strand, 12058417 - 12058282
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||| ||||| |||||||||  | ||||||||||||| |||||||||| |   | | ||| |||||||||||||||||||||||||||| |    
T  12058417 ttatgcaaacaaaccaattaactgcctagcagaaaattaaaagaacttttatacatcttaagttacaacgtaattgaattattgagattaaaaccagtcc 12058318  T
Q  167 ttgtgggaacgatatttttactacttcgatagtattt 203  Q
    |||| |||| ||||||| |||||||||||||||||||    
T  12058317 ttgt-ggaatgatatttctactacttcgatagtattt 12058282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 205
Target Start/End: Original strand, 22131449 - 22131567
Alignment:
Q  87 actgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatattttta 186  Q
    |||||||||||| |||   ||| ||| ||||||||||||  || | ||| |||||||||||||||||||||| ||||| ||||||| |||||||||||||    
T  22131449 actgcctagtggaaaaactaaataacttttatacatcctaatttacaacgtaattgaattattgagattaaatccagtccttgtggaaacgatattttta 22131548  T
Q  187 ctacttcgatagtatttgg 205  Q
    ||||||||||||| |||||    
T  22131549 ctacttcgatagtttttgg 22131567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 35049839 - 35049770
Alignment:
Q  137 taattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||| ||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||    
T  35049839 taattgaattactgagattaaaatcagtccttatgggaacgatatttttactacttcgatagtatttggt 35049770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 206
Target Start/End: Original strand, 20056037 - 20056182
Alignment:
Q  64 cttttatgcaatcaaatcaatttactgcctagtggcaa--attaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaacc 161  Q
    |||||||||||||||| ||||  |||||||||||||||  |  |||| ||| |||| |||||||   |||||||    ||| ||| |||||||||||||     
T  20056037 cttttatgcaatcaaaccaatcaactgcctagtggcaagaaaaaaaacaacttttacacatcctaaataataacgcttttgcatttttgagattaaaac- 20056135  T
Q  162 agttcttgtgggaacgatatt--tttactacttcgatagtatttggt 206  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||||    
T  20056136 agttcttgtgggaacaatattattttactacttcgatagtttttggt 20056182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 203
Target Start/End: Original strand, 43492050 - 43492087
Alignment:
Q  166 cttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||||||||||||||||||||||||||||||    
T  43492050 cttgtgggaacgatatttttactacttcgatagtattt 43492087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 22936787 - 22936732
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||||||    
T  22936787 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtattt 22936732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 41306373 - 41306318
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||||||    
T  41306373 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtattt 41306318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 41876601 - 41876546
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||||||    
T  41876601 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtattt 41876546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 37215313 - 37215371
Alignment:
Q  144 attattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    |||||||||||||| || ||| || ||||||||||||||||||||||||||| |||||||    
T  37215313 attattgagattaacac-agtcctcgtgggaacgatatttttactacttcgacagtattt 37215371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 203
Target Start/End: Original strand, 42063226 - 42063260
Alignment:
Q  169 gtgggaacgatatttttactacttcgatagtattt 203  Q
    |||||||||||||||||||||||||||||||||||    
T  42063226 gtgggaacgatatttttactacttcgatagtattt 42063260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 26752548 - 26752493
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || ||||| |||||||||||||||||||||||||||||    
T  26752548 attgagattaacac-agtactcgtggggacgatatttttactacttcgatagtattt 26752493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 14015986 - 14015928
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||| || ||| || |||| ||||||||||||||||||||||||| |||||||    
T  14015986 attgagattaacac-agtcctcgtggaaacgatatttttactacttcgataggatttggt 14015928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 203
Target Start/End: Original strand, 31864012 - 31864046
Alignment:
Q  169 gtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||||||||||||||||| |||||||||    
T  31864012 gtgggaacgatatttttactacttcaatagtattt 31864046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 20055909 - 20056009
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaa-ctttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaa 101  Q
    |||||||| || | ||||| |||||||||||||| |||| ||| |||||  |||  || || |||||||||||||||| ||||  ||||||||||| |||    
T  20055909 tcgaaagacctcatctcatatctctcttattctttaaaatcaatctttattttctgtcgttacttttatgcaatcaaaccaatcaactgcctagtgacaa 20056008  T
Q  102 a 102  Q
    |    
T  20056009 a 20056009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 203
Target Start/End: Complemental strand, 40915981 - 40915949
Alignment:
Q  171 gggaacgatatttttactacttcgatagtattt 203  Q
    ||||| |||||||||||||||||||||||||||    
T  40915981 gggaatgatatttttactacttcgatagtattt 40915949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 67 - 199
Target Start/End: Original strand, 19477 - 19609
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||| ||||  ||||||||| |||||||||||||||| ||||||||||||  || | ||| |||||||||||||||||||||||||||| |    
T  19477 ttatgcaaacaaaccaatcaactgcctagcggcaaattaaaagaacctttatacatcctaatttacaacgtaattgaattattgagattaaaaccagtcc 19576  T
Q  167 ttgtgggaacgatatttttactacttcgatagt 199  Q
    |||||||||||||||||||||||||||||||||    
T  19577 ttgtgggaacgatatttttactacttcgatagt 19609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 29626 - 29688
Alignment:
Q  137 taattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagt 199  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  29626 taattgaattattgagattaaaactagtccttgtgggaacgatatttttactacttcgatagt 29688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 206
Target Start/End: Original strand, 64055 - 64197
Alignment:
Q  64 cttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccag 163  Q
    ||||||||||| || | ||||  ||||||||||||||||| |||| ||| |||||||||||||  | | ||| |||||||||||||||||||||||||||    
T  64055 cttttatgcaaacataccaatcaactgcctagtggcaaatcaaaataacttttatacatccttacttacaacgtaattgaattattgagattaaaaccag 64154  T
Q  164 ttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    | ||||||||||||||||||||||||||| |||||||||||||    
T  64155 tccttgtgggaacgatatttttactactttgatagtatttggt 64197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 62720 - 62773
Alignment:
Q  70 tgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatc 123  Q
    |||||||||| ||||  ||||||||||||||| | |||||||| ||||||||||    
T  62720 tgcaatcaaaccaatcaactgcctagtggcaattcaaaagaacttttatacatc 62773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 15609 - 15747
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||| ||||  ||||||||| |||||||||||||||| |||||||||| |   | | ||| |||||||||||||||||||||||||||| |    
T  15609 ttatgcaaacaaaccaatcaactgcctagcggcaaattaaaagaacttttatacatcttaagttacaacgtaattgaattattgagattaaaaccagtcc 15708  T
Q  167 ttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  15709 ttgtgg-aacgatatttttactacttcgatagtatttggt 15747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0807 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0807
Description:

Target: scaffold0807; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 17 - 206
Target Start/End: Complemental strand, 2046 - 1858
Alignment:
Q  17 ctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacattt 116  Q
    ||||| |||||||||||||| |||||||||||||  ||   || || | ||||||||| |||| ||||  || |||||||||||| | |||| ||| |||    
T  2046 ctcatatctctcttattctttaaaaccaactttactttatgtcgttacatttatgcaaacaaaccaatcaaccgcctagtggcaa-tcaaaacaactttt 1948  T
Q  117 atacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    | |||||||   | | ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  1947 aaacatcctaacttacaacgtaattgaattattgagattaaaatcagttcttgtgggaacgatatttttaccacttcgatagtatttggt 1858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 23 - 206
Target Start/End: Original strand, 4069 - 4252
Alignment:
Q  23 tctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacat 122  Q
    |||||||||||||||||| | | |||||  ||   || || ||||||||||| ||||  |||  ||| ||||||||||||| |||| ||| |||||||||    
T  4069 tctctcttattcttaaaatcaacctttactttttgtcgttacttttatgcaaacaaacaaatcaacttcctagtggcaaatcaaaataacttttatacat 4168  T
Q  123 cctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||   | | ||||||||||||||||||||||||||| |||| ||||||||||| ||| |||||||||||||||||||||||||    
T  4169 cctaacttacaacataattgaattattgagattaaaatcagtccttgtgggaacaataattttactacttcgatagtatttggt 4252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 31292 - 31430
Alignment:
Q  67 ttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttc 166  Q
    |||||||| |||||||||  |||| |||| |||||||||||||||| |||||||||| |   | | ||| ||||||||||||||||||||||| |||| |    
T  31292 ttatgcaaacaaatcaatcaactgtctagcggcaaattaaaagaacttttatacatcttaagttacaacgtaattgaattattgagattaaaatcagtcc 31391  T
Q  167 ttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  31392 ttgtgg-aacgatatttttactacttcgatagtatttggt 31430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 65 - 206
Target Start/End: Complemental strand, 65249 - 65108
Alignment:
Q  65 ttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagt 164  Q
    |||||||||||| |||||||  | | ||||||||||||| |||||||| |||||||||||| ||| | |||  ||||||| |||||||||||||| ||||    
T  65249 ttttatgcaatcgaatcaatcaaattcctagtggcaaatcaaaagaacttttatacatcctattttacaacgcaattgaaatattgagattaaaaacagt 65150  T
Q  165 tcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
      | |||||||||||||||||||||||| |||||||||||||    
T  65149 catcgtgggaacgatatttttactacttggatagtatttggt 65108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 206
Target Start/End: Complemental strand, 58668 - 58466
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaa 102  Q
    ||||||||||| | ||||| | |||||||||||||||| | | |||||  ||   |  || ||||||||||| |||| ||||  ||||||||||||||||    
T  58668 tcgaaagatctaaactcatctatctcttattcttaaaatcaatctttactttttgttgttacttttatgcaaacaaaccaatcaactgcctagtggcaaa 58569  T
Q  103 ttaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatt 202  Q
    | |||| ||| ||||||| ||||   | | ||| ||||| |||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||    
T  58568 tcaaaataacttttatacgtcctaacttacaacgtaatttaattattgagattaaaac-agtccttttgggaacgatatttttactacttcgatagtatt 58470  T
Q  203 tggt 206  Q
    ||||    
T  58469 tggt 58466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 58458 - 58416
Alignment:
Q  164 ttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  58458 ttcttgtgggaacgatatttttactacttcaatagtatttggt 58416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 65 - 206
Target Start/End: Original strand, 10603 - 10743
Alignment:
Q  65 ttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagt 164  Q
    ||||||| || |||| ||||  ||||||||||||||| | |||||||| ||||||||||||   | | ||| || |||||||||||||||||||||||||    
T  10603 ttttatgtaaacaaaccaatcaactgcctagtggcaa-tcaaaagaacttttatacatcctaacttacaacgtagttgaattattgagattaaaaccagt 10701  T
Q  165 tcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
     |||||||||||  ||||||||||||||||||||||||||||    
T  10702 ccttgtgggaacattatttttactacttcgatagtatttggt 10743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 3 - 199
Target Start/End: Complemental strand, 14306 - 14112
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaa 102  Q
    |||||||| |||| ||||| ||||| |||||||||||| | | |||||  |||  |  ||||||  |||||| |||| ||||  |||||||||||| |||    
T  14306 tcgaaagacctgatctcatctctcttttattcttaaaaccaatctttattttctgttattgctt--atgcaaacaaaccaatcaactgcctagtggaaaa 14209  T
Q  103 ttaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagt 199  Q
    |||||||||  ||||||||||||  || |  || |||||||||||||||||||||||||| | |||||||||  |||||||||||||||||||||||    
T  14208 ttaaaagaatctttatacatcctaatttacgacgtaattgaattattgagattaaaaccaatccttgtgggatagatatttttactacttcgatagt 14112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 157
Target Start/End: Original strand, 242267 - 242360
Alignment:
Q  64 cttttatgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatcctttttaataacataattgaattattgagattaa 157  Q
    ||||||||||||||||  |||  ||||||||||||||||| |||| ||| |||||| ||||| |||||| ||||| | ||||||||||||||||    
T  242267 cttttatgcaatcaaacaaatcaactgcctagtggcaaatcaaaataacctttatatatcctatttaattacatactggaattattgagattaa 242360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 459 - 514
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || |||||| |||||||||||||||||||||||||||||||||||    
T  459 attgagattaacac-agttctcgtgggaacgatatttttactacttcgatagtattt 514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 179
Target Start/End: Complemental strand, 57576 - 57401
Alignment:
Q  3 tcgaaagatctgacctcatttctctcttattcttaaaaaccaactttaaattcaatctttgcttttatgcaatcaaatcaatttactgcctagtggcaaa 102  Q
    |||||||| |||| ||||| |||||||||||||| ||||||||   | | ||   || || |||||||||||||||| ||||  |||||||||| |||||    
T  57576 tcgaaagacctgatctcatctctctcttattctttaaaaccaatccttatttttgtcgttacttttatgcaatcaaaccaatcaactgcctagtagcaaa 57477  T
Q  103 ttaaaagaacatttatacatcctttttaataacataattgaattattgagattaaaaccagttcttgtgggaacgat 179  Q
      |||| ||| ||||||||||||   ||||||    |||||||||||||  |||| | |||||||||||||||||||    
T  57476 acaaaataacttttatacatcctaaataataaagctattgaattattgaagttaata-cagttcttgtgggaacgat 57401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 147 - 206
Target Start/End: Original strand, 19672 - 19730
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtatttggt 206  Q
    ||||||||||| || ||| || ||||||||||||||||||||||||||||||||||||||    
T  19672 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtatttggt 19730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 3128 - 3073
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||||||||||||||||||||||||||||||    
T  3128 attgagattaacac-agtcctcgtgggaacgatatttttactacttcgatagtattt 3073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 293294 - 293349
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||||||| ||||||||||||||||||||||||||    
T  293294 attgagattaacac-agtcctcgtgggaacaatatttttactacttcgatagtattt 293349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 199
Target Start/End: Original strand, 92736 - 92766
Alignment:
Q  169 gtgggaacgatatttttactacttcgatagt 199  Q
    |||||||||||||||||||||||||||||||    
T  92736 gtgggaacgatatttttactacttcgatagt 92766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1785 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1785
Description:

Target: scaffold1785; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 123
Target Start/End: Original strand, 110 - 163
Alignment:
Q  70 tgcaatcaaatcaatttactgcctagtggcaaattaaaagaacatttatacatc 123  Q
    |||||||||| ||||  ||||||||||||||| | |||||||| ||||||||||    
T  110 tgcaatcaaaccaatcaactgcctagtggcaattcaaaagaacttttatacatc 163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 5246 - 5191
Alignment:
Q  147 attgagattaaaaccagttcttgtgggaacgatatttttactacttcgatagtattt 203  Q
    ||||||||||| || ||| || |||| ||||||||||||||||||||||| ||||||    
T  5246 attgagattaacac-agtcctcgtggtaacgatatttttactacttcgatggtattt 5191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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