View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8792_low_1 (Length: 455)
Name: NF8792_low_1
Description: NF8792
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8792_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 381; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 13 - 436
Target Start/End: Original strand, 37643902 - 37644325
Alignment:
| Q |
13 |
ataatactttgaaatagatnnnnnnnnnttatctacttgtttctttaattcttctcttcgaattaaaattatatatttgatgctcttattgcagatttgg |
112 |
Q |
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| T |
37643902 |
ataatactttgaaatagataaaaaaaaattatctacttgtttctttaattcttctcttcgaatcaaaattatatatttgatgctcttattgcagatttgg |
37644001 |
T |
|
| Q |
113 |
taaaaagtctacatgcagttaatggcactatgtggcacaatacgtttttgggtttatggattgcggcactgcggttggttcaaagggtaggtattaatca |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37644002 |
taaaaagtctacatgcagttaatggcactatgtggcacaatacgtttttgggtttatggattgcggcactgcggttggttcaaagggtaggtattaatca |
37644101 |
T |
|
| Q |
213 |
acaaaagagaagggagagctaacaaattctttatcaaattttgcatgattgatttattcttgtctatgcgatatagtcaagcatcaatgtggaaaggttg |
312 |
Q |
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||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37644102 |
acaaaagggaagggagagctaacgaattctttatcaaattttgcatgattgatttattcttgtctatgcgatatagtcaagcatcaatgtggaaaggttg |
37644201 |
T |
|
| Q |
313 |
tggttgcatgccatttaaattactttgtcagtgtagccacatgtagttttacatttaatcgatcaactgattctttatatgcaatccagtgaccctggaa |
412 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37644202 |
tggttgcatgtcatttaaattactttgtcagtgtagccacatgtagttttacatttaatcgatcaactgattctttatatgcaatccagtgaccctggaa |
37644301 |
T |
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| Q |
413 |
aattccatgcaattacactcagca |
436 |
Q |
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|||||||||||||||||||||||| |
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| T |
37644302 |
aattccatgcaattacactcagca |
37644325 |
T |
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