View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8792_low_10 (Length: 287)
Name: NF8792_low_10
Description: NF8792
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8792_low_10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 16 - 287
Target Start/End: Complemental strand, 33928496 - 33928225
Alignment:
| Q |
16 |
cacatctaaagaaaaagctcaacaaatttcatgcagctttagatccatcaaactcaacaacagcttatctatccaagagttttagtgacagaagtttaga |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33928496 |
cacatctaaagaaaaagctcaacaaatttcatgcagctttagatccatcaaactcaacaacagcttatctatccaagagttttagtgacagaagtttaga |
33928397 |
T |
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| Q |
116 |
tgttagcaacaatcatacttcatctcttaagattaatactcaaaattctcaccaatcttcttcttcaacctatgcttcaagcactgagaatatttcaagg |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33928396 |
tgttagcaacaatcatacttcatctcttaagattaatactcaaaattctcatcaatcttcttcttcaacctatgcttcaagcactgagaatatttcaagg |
33928297 |
T |
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| Q |
216 |
ctcttagaaggttggatgagatcttcaccaaattcacaaatcaaaggaaattatcaatatggtcatcaagag |
287 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33928296 |
ctcttggaaggttggatgagatcttcaccaaattcacaaatcaaaggaaattatcaatatggtcatcaagag |
33928225 |
T |
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