View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8793_high_5 (Length: 549)

Name: NF8793_high_5
Description: NF8793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8793_high_5
NF8793_high_5
[»] chr7 (27 HSPs)
chr7 (68-539)||(34822054-34822526)
chr7 (18-85)||(46534402-46534469)
chr7 (24-82)||(4060349-4060407)
chr7 (18-79)||(42328223-42328284)
chr7 (18-82)||(6476923-6476987)
chr7 (20-60)||(39870061-39870101)
chr7 (24-88)||(43156559-43156623)
chr7 (18-60)||(28235304-28235346)
chr7 (20-82)||(36121428-36121490)
chr7 (18-76)||(36820329-36820387)
chr7 (20-85)||(40061157-40061222)
chr7 (19-79)||(981337-981397)
chr7 (34-82)||(35670456-35670504)
chr7 (20-84)||(43544936-43545000)
chr7 (24-79)||(27826709-27826764)
chr7 (24-79)||(28494320-28494375)
chr7 (24-83)||(28958166-28958225)
chr7 (20-79)||(30582671-30582730)
chr7 (20-79)||(35670394-35670453)
chr7 (20-79)||(37658155-37658214)
chr7 (24-79)||(42265317-42265372)
chr7 (24-79)||(42329067-42329122)
chr7 (18-79)||(46349922-46349983)
chr7 (19-79)||(21920835-21920895)
chr7 (20-84)||(33982355-33982419)
chr7 (24-60)||(43337652-43337688)
chr7 (18-78)||(48935236-48935296)
[»] chr3 (31 HSPs)
chr3 (18-82)||(17666612-17666676)
chr3 (18-81)||(43968390-43968453)
chr3 (19-79)||(12122213-12122273)
chr3 (18-79)||(10809537-10809598)
chr3 (18-79)||(45356456-45356517)
chr3 (20-77)||(36660176-36660233)
chr3 (19-79)||(36544477-36544537)
chr3 (19-79)||(36563787-36563847)
chr3 (20-84)||(42167372-42167436)
chr3 (24-79)||(12055559-12055614)
chr3 (20-79)||(41888809-41888868)
chr3 (18-85)||(52959286-52959353)
chr3 (20-82)||(32111600-32111662)
chr3 (20-82)||(40980180-40980242)
chr3 (20-78)||(46114989-46115047)
chr3 (20-85)||(12122921-12122986)
chr3 (18-79)||(19274730-19274791)
chr3 (24-84)||(41991728-41991788)
chr3 (20-84)||(43860721-43860785)
chr3 (20-84)||(50935708-50935772)
chr3 (24-79)||(8321475-8321530)
chr3 (26-77)||(8879366-8879417)
chr3 (24-79)||(30317988-30318043)
chr3 (24-79)||(34436019-34436074)
chr3 (18-60)||(32999695-32999737)
chr3 (18-60)||(42528094-42528136)
chr3 (20-86)||(48747397-48747463)
chr3 (26-79)||(4070816-4070869)
chr3 (20-60)||(7041749-7041789)
chr3 (20-60)||(22978098-22978138)
chr3 (20-84)||(48071971-48072035)
[»] chr4 (25 HSPs)
chr4 (20-83)||(49491546-49491609)
chr4 (20-84)||(48953025-48953089)
chr4 (24-79)||(33984088-33984143)
chr4 (24-82)||(39840239-39840297)
chr4 (22-79)||(202290-202347)
chr4 (24-85)||(53284001-53284062)
chr4 (20-84)||(19869955-19870019)
chr4 (24-79)||(6238188-6238243)
chr4 (21-84)||(14269864-14269927)
chr4 (24-79)||(19801907-19801962)
chr4 (20-79)||(19912673-19912732)
chr4 (20-79)||(30411292-30411351)
chr4 (24-82)||(2943696-2943753)
chr4 (24-78)||(37114478-37114532)
chr4 (26-60)||(44525984-44526018)
chr4 (18-79)||(37498203-37498264)
chr4 (26-79)||(49335237-49335290)
chr4 (18-82)||(24152673-24152737)
chr4 (19-79)||(25686986-25687046)
chr4 (18-82)||(30653329-30653393)
chr4 (27-79)||(36181417-36181469)
chr4 (20-84)||(43590529-43590593)
chr4 (24-60)||(45561360-45561396)
chr4 (20-60)||(49648860-49648900)
chr4 (20-84)||(50792456-50792520)
[»] chr5 (29 HSPs)
chr5 (18-82)||(24463514-24463578)
chr5 (18-82)||(3749404-3749468)
chr5 (24-79)||(10815063-10815118)
chr5 (24-79)||(12280781-12280836)
chr5 (24-85)||(36761056-36761117)
chr5 (24-85)||(41734313-41734374)
chr5 (24-79)||(6789658-6789713)
chr5 (24-79)||(15498645-15498700)
chr5 (24-79)||(24171365-24171420)
chr5 (24-79)||(27813045-27813100)
chr5 (24-79)||(29525365-29525420)
chr5 (24-79)||(34589970-34590025)
chr5 (24-79)||(37530789-37530844)
chr5 (24-79)||(42709311-42709366)
chr5 (24-86)||(3033386-3033448)
chr5 (18-60)||(5050140-5050182)
chr5 (18-84)||(5102741-5102807)
chr5 (20-82)||(11575619-11575681)
chr5 (18-60)||(35766578-35766620)
chr5 (22-79)||(1923947-1924004)
chr5 (18-79)||(2891012-2891073)
chr5 (18-79)||(7157536-7157597)
chr5 (24-77)||(16218352-16218405)
chr5 (20-84)||(8520492-8520556)
chr5 (24-60)||(11784237-11784273)
chr5 (24-60)||(12939926-12939962)
chr5 (24-60)||(12953876-12953912)
chr5 (20-60)||(13359521-13359561)
chr5 (18-82)||(36959463-36959527)
[»] chr1 (24 HSPs)
chr1 (24-86)||(47326628-47326690)
chr1 (18-62)||(2937354-2937398)
chr1 (20-84)||(4640133-4640197)
chr1 (18-85)||(2459684-2459751)
chr1 (18-77)||(9423093-9423152)
chr1 (17-83)||(38058745-38058811)
chr1 (18-79)||(41865287-41865348)
chr1 (24-85)||(50586223-50586284)
chr1 (20-60)||(39325557-39325597)
chr1 (20-79)||(3796004-3796063)
chr1 (20-79)||(5698126-5698185)
chr1 (20-79)||(14390422-14390481)
chr1 (24-79)||(27747607-27747662)
chr1 (24-79)||(30358074-30358129)
chr1 (24-79)||(39325611-39325666)
chr1 (24-79)||(45900169-45900224)
chr1 (24-82)||(11823581-11823639)
chr1 (20-53)||(42330221-42330254)
chr1 (24-60)||(38624087-38624123)
chr1 (24-60)||(38815593-38815629)
chr1 (24-84)||(43847473-43847533)
chr1 (20-60)||(44109972-44110012)
chr1 (20-60)||(44299984-44300024)
chr1 (24-60)||(46315732-46315768)
[»] scaffold0330 (1 HSPs)
scaffold0330 (27-79)||(6991-7043)
[»] chr8 (20 HSPs)
chr8 (18-82)||(3512468-3512532)
chr8 (18-79)||(2773621-2773682)
chr8 (20-84)||(31642789-31642853)
chr8 (24-79)||(5574602-5574657)
chr8 (20-79)||(12208806-12208865)
chr8 (20-79)||(12453234-12453293)
chr8 (20-79)||(18146342-18146401)
chr8 (20-79)||(43150252-43150311)
chr8 (24-79)||(43800813-43800868)
chr8 (20-79)||(45069859-45069918)
chr8 (24-82)||(22215108-22215166)
chr8 (20-82)||(35253070-35253132)
chr8 (21-79)||(45237834-45237892)
chr8 (24-57)||(14911787-14911820)
chr8 (20-60)||(5838275-5838315)
chr8 (20-60)||(29725760-29725800)
chr8 (26-82)||(35160316-35160372)
chr8 (24-60)||(38747001-38747037)
chr8 (20-60)||(39104218-39104258)
chr8 (20-60)||(43873977-43874017)
[»] chr2 (23 HSPs)
chr2 (20-84)||(38928604-38928668)
chr2 (24-79)||(1876077-1876132)
chr2 (24-82)||(42519711-42519769)
chr2 (18-79)||(28014465-28014526)
chr2 (24-60)||(38324257-38324293)
chr2 (20-79)||(7183322-7183381)
chr2 (20-79)||(10247423-10247482)
chr2 (24-79)||(11018076-11018131)
chr2 (24-79)||(12160958-12161013)
chr2 (24-79)||(30523609-30523664)
chr2 (20-79)||(33178961-33179020)
chr2 (24-79)||(39241205-39241260)
chr2 (18-85)||(43496156-43496223)
chr2 (20-78)||(18109755-18109813)
chr2 (26-84)||(24520264-24520322)
chr2 (24-86)||(38928534-38928596)
chr2 (17-82)||(35422040-35422105)
chr2 (18-79)||(42097950-42098011)
chr2 (20-60)||(5774112-5774152)
chr2 (20-84)||(6322180-6322244)
chr2 (24-60)||(34245265-34245301)
chr2 (20-60)||(36600956-36600996)
chr2 (24-60)||(36936117-36936153)
[»] chr6 (13 HSPs)
chr6 (24-79)||(20645658-20645713)
chr6 (18-60)||(6834084-6834126)
chr6 (20-77)||(25023495-25023552)
chr6 (20-84)||(24159233-24159297)
chr6 (20-84)||(32562451-32562515)
chr6 (20-79)||(1789787-1789846)
chr6 (20-79)||(18368774-18368833)
chr6 (24-83)||(21860230-21860289)
chr6 (24-79)||(24119283-24119338)
chr6 (24-82)||(20992309-20992367)
chr6 (18-79)||(21459022-21459083)
chr6 (23-79)||(15508349-15508405)
chr6 (20-60)||(31603952-31603992)
[»] scaffold1391 (1 HSPs)
scaffold1391 (18-60)||(1533-1575)
[»] scaffold0007 (1 HSPs)
scaffold0007 (18-82)||(157653-157717)
[»] scaffold0115 (2 HSPs)
scaffold0115 (20-79)||(4149-4208)
scaffold0115 (20-79)||(11889-11948)
[»] scaffold0060 (1 HSPs)
scaffold0060 (24-79)||(57893-57948)
[»] scaffold0076 (1 HSPs)
scaffold0076 (24-82)||(14235-14293)
[»] scaffold0009 (1 HSPs)
scaffold0009 (20-77)||(94444-94501)


Alignment Details
Target: chr7 (Bit Score: 403; Significance: 0; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 68 - 539
Target Start/End: Original strand, 34822054 - 34822526
Alignment:
Q  68 ttaccaaacacaaccatatgactgttaacttctccttaggtaaaaagaagcggtgagaaactcattcccctccccacccctatcggttcaaaattgacga 167  Q
    ||||||||||||||||||  ||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34822054 ttaccaaacacaaccatagcacttttaacttctccttaggtaaa--gaagcggtgagaaactcattcccctccccacccctatcggttcaaaattgacga 34822151  T
Q  168 ttacttcgatatttatatatattgtcaaaataaataatccttaaattatcttctttgtctagctttttctccctttttcgttgtagtatctttattttaa 267  Q
    |||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34822152 ttacttcgatatttata--tattgtcaaaataaacaatccttaaattatcttctttgtctagctttttctccctttttcgttgtagtatcttttttttaa 34822249  T
Q  268 tgcatacgattatgacatgaggtctttttatcttaacagaaagcaatagatataaatggagtgatattccccagtcgttatctcgtagcaatgttaaaga 367  Q
     |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34822250 ggcatacgattatgatatgaggtctttttatcttaacagaaagcaatagatataaatggagtgatattccccagtcgttatctcgtagcaatgttaaaga 34822349  T
Q  368 caagcacatggtagggtccaaatgttcaatataatttgacatgccttcctttgagtatagtaatagtacctaccacacatgcttctaaaaactcaaccca 467  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34822350 caagcacatggtagggtccaaatgttcaatataatttgacatgccttcctttgagtatagtaatagtacctaccacacatgcttctaaaaactcaaccca 34822449  T
Q  468 tttgccagtagggtatgcactataccacactgagct-----gagccatgcataggcatgcaagtacaattacttctc 539  Q
    ||||| ||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||    
T  34822450 tttgctagtagggtatgcactataccacactgagctgagccgagccatgcataggcatgcaagtacaattacttctc 34822526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 46534469 - 46534402
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccata 85  Q
    ||||||||||||||||||||| |||||| |||||||||||||| |  | ||||||||||||| |||||    
T  46534469 ccaacaagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacacagccata 46534402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 4060407 - 4060349
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    ||||||||||||||| ||||||||||||||||||||| |  | ||||||||||||||||    
T  4060407 agcttataagctaatccaacaaactataagctagcttttttgtgttaccaaacacaacc 4060349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 42328223 - 42328284
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    |||||||||||||||||||||||||| | |||||||||||||| | |  |||||||||||||    
T  42328223 ccaacaagcttataagctaattcaactagctataagctagctttttgttgttaccaaacaca 42328284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 6476987 - 6476923
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    ||||||||||||||||||||| ||| || |||||||||||||| |  | ||||||||||||||||    
T  6476987 ccaacaagcttataagctaatccaagaagctataagctagcttttttgtgttaccaaacacaacc 6476923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 39870061 - 39870101
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  39870061 aacaagcttataagctaatccaacaaactataagctagctt 39870101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 43156623 - 43156559
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccatatga 88  Q
    ||||||||||||||| |||||| |||||||||||||| |  | ||||||||||||| ||||||||    
T  43156623 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacacagccatatga 43156559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 28235346 - 28235304
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagctt 60  Q
    ||||| ||||||||||||||| |||||||||||||||||||||    
T  28235346 ccaacgagcttataagctaatccaacaaactataagctagctt 28235304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 36121490 - 36121428
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    ||||||||||||||||||| ||| || |||||||||| |||||  | ||||||||||||||||    
T  36121490 aacaagcttataagctaatccaataagctataagctatcttctttgtgttaccaaacacaacc 36121428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 36820387 - 36820329
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaac 76  Q
    ||||||| ||||||||||||||||| || ||||||| ||||||||||  ||||||||||    
T  36820387 ccaacaaacttataagctaattcaataagctataagatagcttctcgctgttaccaaac 36820329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 40061222 - 40061157
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccata 85  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  | ||||||||||||| |||||    
T  40061222 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacacagccata 40061157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 981397 - 981337
Alignment:
Q  19 caacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    |||| ||||||||||||||| ||||||||||||||||| ||| |  | |||||||||||||    
T  981397 caactagcttataagctaatccaacaaactataagctaacttttttgtgttaccaaacaca 981337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Original strand, 35670456 - 35670504
Alignment:
Q  34 ctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    |||||||||||| |||||||||||||||| |  ||||||||||||||||    
T  35670456 ctaattcaacaagctataagctagcttcttgttgttaccaaacacaacc 35670504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 43544936 - 43545000
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccat 84  Q
    ||||||||||||||||| | |||||| ||||||| |||||| |  | ||||||||||||||||||    
T  43544936 aacaagcttataagctagtccaacaagctataagttagcttattcgtgttaccaaacacaaccat 43545000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 27826764 - 27826709
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  27826764 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 27826709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 28494320 - 28494375
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  28494320 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 28494375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 28958166 - 28958225
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacca 83  Q
    |||||||||| |||| |||||| |||||||||||||| |  | |||||||||||||||||    
T  28958166 agcttataagttaatccaacaagctataagctagcttttttgtgttaccaaacacaacca 28958225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 30582730 - 30582671
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  | |||||||||||||    
T  30582730 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacaca 30582671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 35670394 - 35670453
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  | |||||||||||||    
T  35670394 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacaca 35670453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 37658155 - 37658214
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  | |||||||||||||    
T  37658155 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacaca 37658214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 42265317 - 42265372
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  42265317 agcttataagctaatccaacaagctataagctagcttttttgagttaccaaacaca 42265372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 42329067 - 42329122
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  42329067 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 42329122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 46349922 - 46349983
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    |||||||||||||||| |||| ||| || |||||||||||||| |  | |||||||||||||    
T  46349922 ccaacaagcttataagttaatccaagaagctataagctagcttttttgtgttaccaaacaca 46349983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 21920835 - 21920895
Alignment:
Q  19 caacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    |||| ||||||||||||| | |||||| |||||||||||||| |  | |||||||||||||    
T  21920835 caactagcttataagctagtccaacaagctataagctagcttatttgtgttaccaaacaca 21920895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 33982355 - 33982419
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccat 84  Q
    ||||||||||||||||| |  ||||| |||||||||||||| |  | || |||||||||||||||    
T  33982355 aacaagcttataagctagtctaacaagctataagctagcttattcgtgtcaccaaacacaaccat 33982419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 43337688 - 43337652
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  43337688 agcttataagctaatccaacaagctataagctagctt 43337652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 48935296 - 48935236
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacac 78  Q
    ||||| ||||||||| ||||| |||||| |||||||||||||| |  | ||||||||||||    
T  48935296 ccaacgagcttataaactaatccaacaagctataagctagcttatttgtgttaccaaacac 48935236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 4e-21; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 17666676 - 17666612
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  17666676 ccaacaagcttataagctaattcaacaagctataagctagcttctcgttgttaccaaacacaacc 17666612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 43968390 - 43968453
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaac 81  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  43968390 ccaacaagcttataagctaattcaacaaattataagctaacttctcgtcgttaccaaacacaac 43968453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 12122213 - 12122273
Alignment:
Q  19 caacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |  |||||||||||||    
T  12122213 caacaagcttataagctaattcaacaagctataagctagcttcttgttgttaccaaacaca 12122273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 10809537 - 10809598
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||||||||||| || |||||||||||||| ||| | ||||||||||||    
T  10809537 ccaacaagcttataagctaattcaagaagctataagctagcttttcgtcattaccaaacaca 10809598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 45356456 - 45356517
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    |||||||||||||||||||||||||||| ||||||| |||||||| |  |||||||||||||    
T  45356456 ccaacaagcttataagctaattcaacaagctataagttagcttcttgatgttaccaaacaca 45356517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 36660176 - 36660233
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaaca 77  Q
    ||||||||||||||||||| ||||||||||||||||||||| |  | |||||||||||    
T  36660176 aacaagcttataagctaatccaacaaactataagctagcttttttgtgttaccaaaca 36660233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 36544537 - 36544477
Alignment:
Q  19 caacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||||| || |||||||||| ||||||  ||||||||||||||    
T  36544537 caacaagcttataagttaattcaataagctataagctaacttctcatcgttaccaaacaca 36544477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 36563787 - 36563847
Alignment:
Q  19 caacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||||| || |||||||||| ||||||  ||||||||||||||    
T  36563787 caacaagcttataagttaattcaataagctataagctaacttctcatcgttaccaaacaca 36563847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 42167372 - 42167436
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccat 84  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  | ||||||||||||||||||    
T  42167372 aacaagcttataagctagtccaacaagctataagctagcttattcgtgttaccaaacacaaccat 42167436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 12055559 - 12055614
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| ||||||||||||||||||||| |  | |||||||||||||    
T  12055559 agcttataagctaatccaacaaactataagctagcttttttgtgttaccaaacaca 12055614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 41888868 - 41888809
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||| | ||||||||||||||||||||| |  | |||||||||||||    
T  41888868 aacaagcttataagctagtccaacaaactataagctagcttattcgtgttaccaaacaca 41888809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 52959353 - 52959286
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccata 85  Q
    ||||| |||||||||| |||| ||||||||||||||||||||| |  | ||||||||||||| |||||    
T  52959353 ccaacgagcttataagttaatccaacaaactataagctagcttatttgtgttaccaaacacatccata 52959286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 32111600 - 32111662
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  | ||||||||||||||||    
T  32111600 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacacaacc 32111662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 40980180 - 40980242
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    |||||| |||||||||| |||||||||||||||||||| || |  | ||||||||||||||||    
T  40980180 aacaagtttataagctagttcaacaaactataagctagtttttttgtgttaccaaacacaacc 40980242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 46115047 - 46114989
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacac 78  Q
    ||||||||||||||||||| |||||| |||||||||||||| |  | ||||||||||||    
T  46115047 aacaagcttataagctaatccaacaagctataagctagcttatttgtgttaccaaacac 46114989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 12122921 - 12122986
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccata 85  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  | ||||||||||||| |||||    
T  12122921 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacacagccata 12122986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 19274791 - 19274730
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||| ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  19274791 ccaacgagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 19274730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 41991728 - 41991788
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccat 84  Q
    ||||||||||||||| |||||| |||||||||||||| |  | ||||||||||||| ||||    
T  41991728 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacacagccat 41991788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 43860785 - 43860721
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccat 84  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  |  |||||||||||||||||    
T  43860785 aacaagcttataagctagtccaacaagctataagctagcttattcgtattaccaaacacaaccat 43860721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 50935772 - 50935708
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccat 84  Q
    ||||||||||||||||| | ||| || |||||||||||||| |  | ||||||||||||||||||    
T  50935772 aacaagcttataagctagtccaataagctataagctagcttattcgtgttaccaaacacaaccat 50935708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 8321475 - 8321530
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  8321475 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 8321530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 8879417 - 8879366
Alignment:
Q  26 cttataagctaattcaacaaactataagctagcttctcggcgttaccaaaca 77  Q
    ||||||||||||| ||||||||||||||||||||| |  | |||||||||||    
T  8879417 cttataagctaatccaacaaactataagctagcttttttgtgttaccaaaca 8879366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 30317988 - 30318043
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| ||||||||||||||||||| | |  | |||||||||||||    
T  30317988 agcttataagctaatccaacaaactataagctagcatttttgtgttaccaaacaca 30318043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 34436019 - 34436074
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  34436019 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 34436074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 32999695 - 32999737
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||||||||| ||| || ||||||||||||||    
T  32999695 ccaacaagcttataagctaatccaagaagctataagctagctt 32999737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 42528094 - 42528136
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||||||| | |||||| ||||||||||||||    
T  42528094 ccaacaagcttataagctagtccaacaagctataagctagctt 42528136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 86
Target Start/End: Complemental strand, 48747463 - 48747397
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccatat 86  Q
    ||||||||||||||||| | ||| ||||||||||||| ||| |  | ||||||||||||| ||||||    
T  48747463 aacaagcttataagctagtccaataaactataagctaacttttttgtgttaccaaacacagccatat 48747397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 4070869 - 4070816
Alignment:
Q  26 cttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||| ||||||||||||||| ||||||| |  | |||||||||||||    
T  4070869 cttataagctagttcaacaaactataaactagcttatttgtgttaccaaacaca 4070816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 7041789 - 7041749
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||||| | |||||| ||||||||||||||    
T  7041789 aacaagcttataagctagtccaacaagctataagctagctt 7041749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 22978138 - 22978098
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||||| | |||||| ||||||||||||||    
T  22978138 aacaagcttataagctagtccaacaagctataagctagctt 22978098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 48072035 - 48071971
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccat 84  Q
    ||||||||||||||||| | |||||| ||||||||||| || |  | |||| |||||||||||||    
T  48072035 aacaagcttataagctagtccaacaagctataagctagtttattcgtgttaacaaacacaaccat 48071971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 4e-18; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 49491546 - 49491609
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacca 83  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||    
T  49491546 aacaaacttataagctaattcaacaaactataagctagcttcttgttgttaccaaacacaacca 49491609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 48953089 - 48953025
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccat 84  Q
    ||||||||||||||||| | |||||| |||||||||||||| || | ||||||||||||||||||    
T  48953089 aacaagcttataagctagtccaacaagctataagctagcttatccgtgttaccaaacacaaccat 48953025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 33984143 - 33984088
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    |||||||||||||||||||||| |||||||||||||| |  | |||||||||||||    
T  33984143 agcttataagctaattcaacaagctataagctagcttttttgtgttaccaaacaca 33984088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 39840239 - 39840297
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    ||||||||||||||| |||||| |||||||||||||| |  | ||||||||||||||||    
T  39840239 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacacaacc 39840297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 202347 - 202290
Alignment:
Q  22 caagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  202347 caagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 202290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 53284062 - 53284001
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccata 85  Q
    ||||||||||||||| |||||| |||||||||||||| |  | ||||||||||||| |||||    
T  53284062 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacacagccata 53284001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 19870019 - 19869955
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccat 84  Q
    ||||||||||||||||| ||||| || |||||||||||||| |  | ||||||||||||| ||||    
T  19870019 aacaagcttataagctagttcaataagctataagctagcttattcgtgttaccaaacacagccat 19869955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 6238243 - 6238188
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  6238243 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 6238188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 84
Target Start/End: Original strand, 14269864 - 14269927
Alignment:
Q  21 acaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccat 84  Q
    |||||||||||||||| | |||||| |||||||||||||| |  | ||||||||||||| ||||    
T  14269864 acaagcttataagctagtccaacaagctataagctagcttattcgtgttaccaaacacagccat 14269927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 19801907 - 19801962
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  19801907 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 19801962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 19912732 - 19912673
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  | |||||||||||||    
T  19912732 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacaca 19912673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 30411292 - 30411351
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  | |||||||||||||    
T  30411292 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacaca 30411351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 2943696 - 2943753
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    ||||||||||||||| |||||||||||||||||| || |  | ||||||||||||||||    
T  2943696 agcttataagctaatccaacaaactataagctag-ttttttgtgttaccaaacacaacc 2943753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 37114478 - 37114532
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacac 78  Q
    ||||||||||||||| |||||| |||||||||||||| |  | ||||||||||||    
T  37114478 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacac 37114532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 60
Target Start/End: Original strand, 44525984 - 44526018
Alignment:
Q  26 cttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||| |||||||||||||||||||||    
T  44525984 cttataagctaatccaacaaactataagctagctt 44526018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 37498264 - 37498203
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||| ||||||||||||||| |||||||||||||| |||| | |  | |||||||||||||    
T  37498264 ccaacgagcttataagctaatccaacaaactataagttagcctttttgtgttaccaaacaca 37498203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 49335237 - 49335290
Alignment:
Q  26 cttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  49335237 cttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 49335290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 24152737 - 24152673
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    ||||| ||||||||| ||| | |||||| |||||||||||||| |  | ||||||||||||||||    
T  24152737 ccaactagcttataaactagtccaacaagctataagctagcttatttgtgttaccaaacacaacc 24152673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 25687046 - 25686986
Alignment:
Q  19 caacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    |||||||||||||||||||| ||| |||||||||  |||||| |  | |||||||||||||    
T  25687046 caacaagcttataagctaatccaaaaaactataaattagcttttttgtgttaccaaacaca 25686986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 30653329 - 30653393
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    ||||||||||||||||||| | |||||| | |||||||| ||| |  | ||||||||||||||||    
T  30653329 ccaacaagcttataagctagtccaacaagccataagctaacttttttgtgttaccaaacacaacc 30653393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 36181417 - 36181469
Alignment:
Q  27 ttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||| ||||||||||||| |||||| |  | |||||||||||||    
T  36181417 ttataagctaatttaacaaactataagttagcttttttgtgttaccaaacaca 36181469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 43590593 - 43590529
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccat 84  Q
    ||||| ||||||||||| | |||||| |||||||||||||| |  | ||||||||||||| ||||    
T  43590593 aacaaacttataagctagtccaacaagctataagctagcttattcgtgttaccaaacacagccat 43590529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 45561360 - 45561396
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  45561360 agcttataagctaatccaacaagctataagctagctt 45561396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 49648860 - 49648900
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||||| | |||||| ||||||||||||||    
T  49648860 aacaagcttataagctagtccaacaagctataagctagctt 49648900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 50792456 - 50792520
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccat 84  Q
    ||||||||||||||||| | |||||| |||||| ||||||| |  | ||||||||||||| ||||    
T  50792456 aacaagcttataagctagtccaacaagctataaactagcttattcgtgttaccaaacacagccat 50792520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 24463578 - 24463514
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    ||||||| ||||||||||||||||| || ||||||||||||||||||  ||||||||||||||||    
T  24463578 ccaacaaacttataagctaattcaataacctataagctagcttctcgttgttaccaaacacaacc 24463514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 3749404 - 3749468
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    ||||||| ||||||| ||||||||||||| ||||| |||||||||||  ||||||||||| ||||    
T  3749404 ccaacaaacttataaactaattcaacaaattataaactagcttctcgaggttaccaaacataacc 3749468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 10815118 - 10815063
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| ||||||||||||||||||||| |  | |||||||||||||    
T  10815118 agcttataagctaatccaacaaactataagctagcttttttgtgttaccaaacaca 10815063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 12280836 - 12280781
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| ||||||||||||||||||||| |  | |||||||||||||    
T  12280836 agcttataagctaatccaacaaactataagctagcttttttgtgttaccaaacaca 12280781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 36761117 - 36761056
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccata 85  Q
    ||||||||||||||| |||||| |||||||||||||| |  | ||||||||||||| |||||    
T  36761117 agcttataagctaatccaacaacctataagctagcttttttgtgttaccaaacacatccata 36761056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 41734313 - 41734374
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccata 85  Q
    ||||||||||||||| |||||| |||||||||||||| |  | ||||||||||||| |||||    
T  41734313 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacacagccata 41734374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 6789658 - 6789713
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  6789658 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 6789713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 15498700 - 15498645
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  15498700 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 15498645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 24171420 - 24171365
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  24171420 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 24171365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 27813045 - 27813100
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||| |||||||||||| |||||||||||||| |  | |||||||||||||    
T  27813045 agcttataaactaattcaacaagctataagctagcttttttgtgttaccaaacaca 27813100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 29525365 - 29525420
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  29525365 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 29525420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 34589970 - 34590025
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  34589970 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 34590025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 37530789 - 37530844
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  37530789 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 37530844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 42709366 - 42709311
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  42709366 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 42709311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 3033448 - 3033386
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccatat 86  Q
    ||||||||||||| | |||||| |||||||||||||| |    ||||||||||||||||||||    
T  3033448 agcttataagctagtccaacaagctataagctagcttttttatgttaccaaacacaaccatat 3033386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 5050140 - 5050182
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagctt 60  Q
    ||||| ||||||||||||||| |||||| ||||||||||||||    
T  5050140 ccaacgagcttataagctaatccaacaagctataagctagctt 5050182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 5102741 - 5102807
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccat 84  Q
    ||||||| ||||||||||| | |||||| ||||| |||||||| |  | ||||||||||||||||||    
T  5102741 ccaacaaacttataagctagtccaacaatctatacgctagcttattcgtgttaccaaacacaaccat 5102807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 11575681 - 11575619
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    ||||| ||||||||||| | |||||| |||||||||||||| |  | ||||||||||||||||    
T  11575681 aacaaacttataagctagtccaacaagctataagctagcttttttgtgttaccaaacacaacc 11575619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 35766620 - 35766578
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||||||||| ||| || ||||||||||||||    
T  35766620 ccaacaagcttataagctaatccaagaagctataagctagctt 35766578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 1924004 - 1923947
Alignment:
Q  22 caagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| | |||||| |||||||||||||| |  | |||||||||||||    
T  1924004 caagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacaca 1923947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 2891012 - 2891073
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    |||||||||||||||| || | |||||||||||||||||| || |  | |||||||||||||    
T  2891012 ccaacaagcttataagttagtccaacaaactataagctagattatttgtgttaccaaacaca 2891073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 7157536 - 7157597
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    |||||||||||||||| || | |||||| |||||||||||||| |  | |||||||||||||    
T  7157536 ccaacaagcttataagttagtccaacaagctataagctagcttttttgtgttaccaaacaca 7157597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 77
Target Start/End: Original strand, 16218352 - 16218405
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaaca 77  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||    
T  16218352 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 16218405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 8520556 - 8520492
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccat 84  Q
    ||||||||||||||||| | |||||| ||||||| |||||| |  | ||||||||||||| ||||    
T  8520556 aacaagcttataagctagtccaacaagctataagttagcttattcgtgttaccaaacacagccat 8520492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 11784237 - 11784273
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  11784237 agcttataagctaatccaacaagctataagctagctt 11784273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 12939926 - 12939962
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  12939926 agcttataagctaatccaacaaattataagctagctt 12939962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 12953876 - 12953912
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  12953876 agcttataagctaatccaacaaattataagctagctt 12953912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 13359521 - 13359561
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||||||| |||||| ||||| ||||||||    
T  13359521 aacaagcttataagctaatccaacaagctatatgctagctt 13359561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 36959527 - 36959463
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    ||||||||||| ||| ||| || ||||| |||||||||||||| |  | ||||||||||||||||    
T  36959527 ccaacaagcttgtaaactagtttaacaagctataagctagcttttttgtgttaccaaacacaacc 36959463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 47326628 - 47326690
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccatat 86  Q
    ||||||||||||||| ||||||||||||||||||||| |  | ||||||||||||| ||||||    
T  47326628 agcttataagctaatccaacaaactataagctagcttttttgggttaccaaacacacccatat 47326690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 2937398 - 2937354
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttct 62  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||    
T  2937398 ccaacaaacttataagctaattcaacaagctataagctagcttct 2937354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 4640133 - 4640197
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccat 84  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  | ||||||||||||||||||    
T  4640133 aacaagcttataagctagtccaacaagctataagctagcttattcgtgttaccaaacacaaccat 4640197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 2459684 - 2459751
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccata 85  Q
    |||| |||||||||||||||| |||||| |||||||||||||| |  | ||||||||||||| |||||    
T  2459684 ccaataagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacacagccata 2459751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 9423093 - 9423152
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaaca 77  Q
    |||||||||||||||||||||||||||| ||||||| | |||||| |  |||||||||||    
T  9423093 ccaacaagcttataagctaattcaacaagctataagttggcttcttgctgttaccaaaca 9423152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 38058811 - 38058745
Alignment:
Q  17 accaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacca 83  Q
    ||||||||| |||||||||| | |||||| |||||||||||||| |  | |||||||||||||||||    
T  38058811 accaacaaggttataagctagtccaacaagctataagctagcttttttgtgttaccaaacacaacca 38058745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 41865348 - 41865287
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||||||| ||| || |||||||||||||| |  | |||||||||||||    
T  41865348 ccaacaagcttataagctaatccaagaagctataagctagcttttttgtgttaccaaacaca 41865287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 50586223 - 50586284
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccata 85  Q
    ||||||||||||||| |||||| |||||||||||||| |  | ||||||||||||| |||||    
T  50586223 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacacacccata 50586284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 39325557 - 39325597
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||||| |||||||| ||||||||||||||    
T  39325557 aacaagcttataagctagttcaacaagctataagctagctt 39325597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 3796004 - 3796063
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  | |||||||||||||    
T  3796004 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacaca 3796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 5698185 - 5698126
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  | |||||||||||||    
T  5698185 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacaca 5698126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 14390481 - 14390422
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  | |||||||||||||    
T  14390481 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacaca 14390422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 27747662 - 27747607
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  27747662 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 27747607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 30358129 - 30358074
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  30358129 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 30358074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 39325666 - 39325611
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  39325666 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 39325611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 45900224 - 45900169
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||| ||||||| || | |||||||||||||    
T  45900224 agcttataagctaatccaacaagctataaactagcttttctgtgttaccaaacaca 45900169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 11823639 - 11823581
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    ||||||||||||||| |||||| |||||| ||||||| |  | ||||||||||||||||    
T  11823639 agcttataagctaatccaacaagctataaactagcttttttgtgttaccaaacacaacc 11823581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 42330254 - 42330221
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataag 53  Q
    ||||||||||||||||||| ||||||||||||||    
T  42330254 aacaagcttataagctaatccaacaaactataag 42330221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 38624123 - 38624087
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||| |||||||||||||| ||||||    
T  38624123 agcttataagctaatccaacaaactataagttagctt 38624087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 38815593 - 38815629
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  38815593 agcttataagctaatccaacaagctataagctagctt 38815629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 43847473 - 43847533
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccat 84  Q
    ||||||||||||| | | ||||||||||||||||||| |  | ||||||||||||| ||||    
T  43847473 agcttataagctagtccgacaaactataagctagcttattcgtgttaccaaacacagccat 43847533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 44109972 - 44110012
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||||| | |||||| ||||||||||||||    
T  44109972 aacaagcttataagctagtccaacaagctataagctagctt 44110012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 44299984 - 44300024
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||||| | |||||| ||||||||||||||    
T  44299984 aacaagcttataagctagtccaacaagctataagctagctt 44300024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 46315732 - 46315768
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  46315732 agcttataagctaatccaacaagctataagctagctt 46315768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 7043 - 6991
Alignment:
Q  27 ttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    |||||||||||||||||||||||||||||||||| |  | |||||||||||||    
T  7043 ttataagctaattcaacaaactataagctagcttttttgtgttaccaaacaca 6991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 3512532 - 3512468
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    ||||||||||||||||||||| ||| || |||||||||||||| |  | ||||||||||||||||    
T  3512532 ccaacaagcttataagctaatccaagaagctataagctagcttttttgtgttaccaaacacaacc 3512468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 2773621 - 2773682
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||||| | |||||| |||||||||||||| |  | |||||||||||||    
T  2773621 ccaacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacaca 2773682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 31642789 - 31642853
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccat 84  Q
    ||||||||||||| ||| | |||||| |||||||||||||| |  | ||||||||||||||||||    
T  31642789 aacaagcttataatctagtccaacaagctataagctagcttattcgtgttaccaaacacaaccat 31642853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 5574657 - 5574602
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    |||||||||| |||||||||||||||||||||| ||| |  | |||||||||||||    
T  5574657 agcttataagttaattcaacaaactataagctaacttttttgtgttaccaaacaca 5574602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 12208865 - 12208806
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  | |||||||||||||    
T  12208865 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacaca 12208806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 12453293 - 12453234
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  | |||||||||||||    
T  12453293 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacaca 12453234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 18146401 - 18146342
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  | |||||||||||||    
T  18146401 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacaca 18146342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 43150311 - 43150252
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  | |||||||||||||    
T  43150311 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacaca 43150252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 43800813 - 43800868
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  43800813 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 43800868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 45069859 - 45069918
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  | |||||||||||||    
T  45069859 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacaca 45069918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 22215166 - 22215108
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    ||||||||||||||| |||||| |||||||||| ||| |  | ||||||||||||||||    
T  22215166 agcttataagctaatccaacaagctataagctaacttttttgtgttaccaaacacaacc 22215108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 35253070 - 35253132
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    ||||||||||||||||  | || |||||||||||||||||| |  | ||||||||||||||||    
T  35253070 aacaagcttataagcttgtccagcaaactataagctagcttgtttgtgttaccaaacacaacc 35253132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 45237834 - 45237892
Alignment:
Q  21 acaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    |||||||||||||||  |||||||| |||||||||||||| |  | |||||||||||||    
T  45237834 acaagcttataagcttgttcaacaagctataagctagcttttttgtgttaccaaacaca 45237892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 57
Target Start/End: Complemental strand, 14911820 - 14911787
Alignment:
Q  24 agcttataagctaattcaacaaactataagctag 57  Q
    ||||||||||||||| ||||||||||||||||||    
T  14911820 agcttataagctaatccaacaaactataagctag 14911787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 5838315 - 5838275
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||||||| |||||| ||||||| ||||||    
T  5838315 aacaagcttataagctaatccaacaagctataagttagctt 5838275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 29725800 - 29725760
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||||| | |||||| ||||||||||||||    
T  29725800 aacaagcttataagctagtccaacaagctataagctagctt 29725760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 82
Target Start/End: Original strand, 35160316 - 35160372
Alignment:
Q  26 cttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    ||||||||||||| ||| || |||||||||||||| |  | ||||||||||||||||    
T  35160316 cttataagctaatccaataagctataagctagcttttttgtgttaccaaacacaacc 35160372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 38747001 - 38747037
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  38747001 agcttataagctaatccaacaagctataagctagctt 38747037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 39104218 - 39104258
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||||| | ||||||| |||||||||||||    
T  39104218 aacaagcttataagctagtccaacaaattataagctagctt 39104258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 43874017 - 43873977
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||||| |||||||| |||||| |||||||    
T  43874017 aacaagcttataagctagttcaacaagctataaactagctt 43873977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 38928604 - 38928668
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccat 84  Q
    ||||||||||||||||| | ||||||||||||||||||||| |    ||||||||||||||||||    
T  38928604 aacaagcttataagctagtccaacaaactataagctagcttattcatgttaccaaacacaaccat 38928668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 1876077 - 1876132
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| ||||||||||||||||||||| |  | |||||||||||||    
T  1876077 agcttataagctaatccaacaaactataagctagcttttttgtgttaccaaacaca 1876132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 42519769 - 42519711
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    ||||||||||||||| |||||| |||||||||||||| |  | ||||||||||||||||    
T  42519769 agcttataagctaatgcaacaagctataagctagcttttttgtgttaccaaacacaacc 42519711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 28014526 - 28014465
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||| ||||||||||||||||| || |||||||||||||| |||   ||||||||||||    
T  28014526 ccaacaaacttataagctaattcaataagctataagctagcttttcgtacttaccaaacaca 28014465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 38324293 - 38324257
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagctt 60  Q
    |||||||||||||||||||||| ||||||||||||||    
T  38324293 agcttataagctaattcaacaagctataagctagctt 38324257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 7183322 - 7183381
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||| ||| | ||||||||||||||||||||| |  | |||||||||||||    
T  7183322 aacaagcttataaactagtccaacaaactataagctagcttttttgtgttaccaaacaca 7183381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 10247423 - 10247482
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||| | ||||||||||||||||| ||| |  | |||||||||||||    
T  10247423 aacaagcttataagctagtccaacaaactataagctaacttttttgtgttaccaaacaca 10247482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 11018076 - 11018131
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  11018076 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 11018131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 12160958 - 12161013
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  12160958 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 12161013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 30523664 - 30523609
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  30523664 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 30523609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 33179020 - 33178961
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  | |||||||||||||    
T  33179020 aacaagcttataagctagtccaacaagctataagctagcttattcgtgttaccaaacaca 33178961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 39241205 - 39241260
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  39241205 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 39241260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 43496223 - 43496156
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccata 85  Q
    ||||| ||||||||||||||| |||||| |||||||||||||| |    |||||||||||||| ||||    
T  43496223 ccaacgagcttataagctaatgcaacaagctataagctagcttatttatgttaccaaacacaatcata 43496156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 18109755 - 18109813
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacac 78  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  | ||||||||||||    
T  18109755 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacac 18109813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 24520264 - 24520322
Alignment:
Q  26 cttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccat 84  Q
    ||||||||||||| |||||| |||||||||||||| |  | ||||||||||||| ||||    
T  24520264 cttataagctaatccaacaagctataagctagcttattcgtgttaccaaacacagccat 24520322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 86
Target Start/End: Original strand, 38928534 - 38928596
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccatat 86  Q
    ||||||||||||| | |||||| |||||||||||||| |    ||||||||||||||||||||    
T  38928534 agcttataagctagtccaacaagctataagctagcttttttatgttaccaaacacaaccatat 38928596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 35422105 - 35422040
Alignment:
Q  17 accaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    ||||||||| |||||||||||| ||| ||||||||| ||||||| |  | ||||| ||||||||||    
T  35422105 accaacaagtttataagctaatccaaaaaactataaactagcttttttgtgttactaaacacaacc 35422040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 42097950 - 42098011
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    |||| |||||||||||||||| ||| || |||||||||||||| |  | |||||||||||||    
T  42097950 ccaataagcttataagctaatccaagaagctataagctagcttttttgtgttaccaaacaca 42098011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 5774152 - 5774112
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||||||| |||||| |||||| |||||||    
T  5774152 aacaagcttataagctaatccaacaagctataaactagctt 5774112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 6322180 - 6322244
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccat 84  Q
    |||||| || ||||||| | |||||| |||||||||||||| |  | ||||||||||||||||||    
T  6322180 aacaagtttctaagctagtccaacaagctataagctagcttattcgtgttaccaaacacaaccat 6322244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 34245301 - 34245265
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  34245301 agcttataagctaatccaacaagctataagctagctt 34245265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 36600996 - 36600956
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||||| | |||||| ||||||||||||||    
T  36600996 aacaagcttataagctagtccaacaagctataagctagctt 36600956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 36936117 - 36936153
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  36936117 agcttataagctaatccaacaagctataagctagctt 36936153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000005; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 20645713 - 20645658
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| ||||||||||||||||||||| |  | |||||||||||||    
T  20645713 agcttataagctaatccaacaaactataagctagcttttttgtgttaccaaacaca 20645658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 6834084 - 6834126
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||||||| |||||||||||||||| ||||||    
T  6834084 ccaacaagcttataagctagttcaacaaactataagatagctt 6834126  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 25023495 - 25023552
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaaca 77  Q
    ||||||||||||||||||| |||||| |||||||||||||| |  | |||||||||||    
T  25023495 aacaagcttataagctaatccaacaagctataagctagcttttttgtgttaccaaaca 25023552  T

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Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 24159297 - 24159233
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccat 84  Q
    ||||||||||||||||| | ||||||||||||||||| ||| |  | ||||||||||||| ||||    
T  24159297 aacaagcttataagctagtccaacaaactataagctaccttattcgtgttaccaaacacatccat 24159233  T

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Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Original strand, 32562451 - 32562515
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaaccat 84  Q
    ||||| ||||||||||| | |||||| |||||||||||||| |  | ||||||||||||||||||    
T  32562451 aacaaacttataagctagtccaacaagctataagctagcttattcgtgttaccaaacacaaccat 32562515  T

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Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 1789846 - 1789787
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  | |||||||||||||    
T  1789846 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacaca 1789787  T

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Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 18368774 - 18368833
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  | |||||||||||||    
T  18368774 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacaca 18368833  T

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Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 21860289 - 21860230
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacca 83  Q
    ||||||||||||||| |||||| |||||||||||||| |  | ||||| |||||||||||    
T  21860289 agcttataagctaatccaacaagctataagctagcttttttgtgttactaaacacaacca 21860230  T

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Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 24119283 - 24119338
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  24119283 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 24119338  T

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Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 20992309 - 20992367
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    ||||||||||||||| ||||||||||||| ||||||| |  | ||||||||||| ||||    
T  20992309 agcttataagctaatccaacaaactataaactagcttttttgtgttaccaaacagaacc 20992367  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 21459083 - 21459022
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||| |||||||||||||||  ||||| |||||||||||||| ||   |||||||||||||    
T  21459083 ccaacgagcttataagctaatctaacaagctataagctagcttatctatgttaccaaacaca 21459022  T

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Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 15508405 - 15508349
Alignment:
Q  23 aagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    |||||||||||||| | |||||| |||||||||||||| |  | |||||||||||||    
T  15508405 aagcttataagctagtccaacaagctataagctagcttattcgtgttaccaaacaca 15508349  T

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Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 31603952 - 31603992
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||||| | || ||||||||||||||||||    
T  31603952 aacaagcttataagctagtccagcaaactataagctagctt 31603992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1391 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 1533 - 1575
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagctt 60  Q
    ||||||||||||||||||| |||||||||||||||| ||||||    
T  1533 ccaacaagcttataagctagttcaacaaactataagatagctt 1575  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 157653 - 157717
Alignment:
Q  18 ccaacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    ||||| |||||||||||||||  |||||||||||||||||||| |    ||||||||||||||||    
T  157653 ccaacgagcttataagctaatctaacaaactataagctagcttatttatgttaccaaacacaacc 157717  T

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Target: scaffold0115 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 4208 - 4149
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  | |||||||||||||    
T  4208 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacaca 4149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 11948 - 11889
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||||| | |||||| |||||||||||||| |  | |||||||||||||    
T  11948 aacaagcttataagctagtccaacaagctataagctagcttttttgtgttaccaaacaca 11889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 57893 - 57948
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacaca 79  Q
    ||||||||||||||| |||||| |||||||||||||| |  | |||||||||||||    
T  57893 agcttataagctaatccaacaagctataagctagcttttttgtgttaccaaacaca 57948  T

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Target: scaffold0076 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 14235 - 14293
Alignment:
Q  24 agcttataagctaattcaacaaactataagctagcttctcggcgttaccaaacacaacc 82  Q
    ||||||||| ||||| ||| ||||||||||||||||| |  | ||||||||||||||||    
T  14235 agcttataatctaatccaataaactataagctagcttttttgtgttaccaaacacaacc 14293  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 94444 - 94501
Alignment:
Q  20 aacaagcttataagctaattcaacaaactataagctagcttctcggcgttaccaaaca 77  Q
    |||||| |||||||||| |||||||| |||||||||||||| |  | |||||||||||    
T  94444 aacaagtttataagctagttcaacaagctataagctagcttattcgtgttaccaaaca 94501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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