View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8793_low_38 (Length: 209)

Name: NF8793_low_38
Description: NF8793
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8793_low_38
NF8793_low_38
[»] chr5 (25 HSPs)
chr5 (21-128)||(38580376-38580480)
chr5 (126-196)||(11361131-11361199)
chr5 (120-196)||(33584329-33584403)
chr5 (140-196)||(2477645-2477701)
chr5 (129-196)||(37321793-37321859)
chr5 (140-196)||(4892211-4892267)
chr5 (140-196)||(8145384-8145440)
chr5 (140-196)||(25398247-25398303)
chr5 (120-196)||(6043511-6043585)
chr5 (140-196)||(14138677-14138733)
chr5 (140-194)||(3362787-3362841)
chr5 (127-196)||(22913054-22913121)
chr5 (129-194)||(38899728-38899791)
chr5 (140-196)||(3522006-3522062)
chr5 (126-196)||(4434007-4434075)
chr5 (128-194)||(12850800-12850864)
chr5 (127-196)||(17545685-17545752)
chr5 (143-196)||(10458409-10458462)
chr5 (143-196)||(3521814-3521866)
chr5 (143-196)||(6043319-6043371)
chr5 (129-196)||(12614733-12614798)
chr5 (148-186)||(27481843-27481881)
chr5 (143-196)||(4892408-4892460)
chr5 (143-196)||(12614544-12614597)
chr5 (143-196)||(33584136-33584188)
[»] chr8 (41 HSPs)
chr8 (127-196)||(32393856-32393923)
chr8 (124-196)||(35353036-35353106)
chr8 (139-196)||(42755042-42755099)
chr8 (129-196)||(1645965-1646030)
chr8 (140-196)||(14128873-14128929)
chr8 (140-196)||(32064754-32064810)
chr8 (140-196)||(34665391-34665447)
chr8 (140-196)||(37986055-37986111)
chr8 (140-196)||(38016980-38017036)
chr8 (140-196)||(6108233-6108289)
chr8 (129-196)||(17841850-17841915)
chr8 (129-196)||(20091801-20091866)
chr8 (129-196)||(24211553-24211618)
chr8 (129-196)||(40780129-40780194)
chr8 (140-195)||(15187569-15187624)
chr8 (124-196)||(26042116-26042186)
chr8 (128-196)||(37132658-37132724)
chr8 (140-196)||(39772801-39772857)
chr8 (140-196)||(41819778-41819834)
chr8 (140-196)||(8453843-8453899)
chr8 (129-196)||(31347782-31347847)
chr8 (141-196)||(7021988-7022043)
chr8 (129-196)||(7017865-7017930)
chr8 (140-196)||(25581239-25581295)
chr8 (140-196)||(27782117-27782173)
chr8 (140-196)||(30835047-30835102)
chr8 (143-196)||(3890421-3890474)
chr8 (143-194)||(1886621-1886672)
chr8 (143-194)||(30834862-30834913)
chr8 (142-196)||(35353247-35353300)
chr8 (143-196)||(1503650-1503702)
chr8 (143-196)||(3596848-3596900)
chr8 (159-196)||(3890616-3890653)
chr8 (143-196)||(17841657-17841709)
chr8 (143-196)||(24844667-24844720)
chr8 (143-196)||(26041920-26041972)
chr8 (128-196)||(27835453-27835519)
chr8 (143-196)||(32064952-32065004)
chr8 (143-196)||(40779936-40779988)
chr8 (143-196)||(42754849-42754901)
chr8 (159-195)||(3597042-3597078)
[»] chr3 (36 HSPs)
chr3 (127-196)||(37217053-37217120)
chr3 (124-196)||(3574527-3574597)
chr3 (140-196)||(2754726-2754782)
chr3 (125-196)||(3456060-3456129)
chr3 (140-195)||(11347277-11347332)
chr3 (127-196)||(48160903-48160970)
chr3 (140-196)||(19650900-19650956)
chr3 (127-196)||(6041882-6041949)
chr3 (140-196)||(8320584-8320640)
chr3 (140-196)||(22426344-22426400)
chr3 (117-196)||(30384999-30385076)
chr3 (140-196)||(37522062-37522118)
chr3 (128-185)||(42921137-42921197)
chr3 (128-196)||(33145712-33145777)
chr3 (140-185)||(42297362-42297407)
chr3 (129-196)||(3137414-3137479)
chr3 (140-196)||(9797029-9797085)
chr3 (140-196)||(33113802-33113858)
chr3 (129-196)||(34482910-34482975)
chr3 (129-196)||(36865027-36865092)
chr3 (140-196)||(33839540-33839596)
chr3 (143-195)||(47738117-47738169)
chr3 (140-194)||(26612794-26612848)
chr3 (143-196)||(37522259-37522311)
chr3 (143-196)||(47738317-47738370)
chr3 (140-196)||(33839741-33839797)
chr3 (140-192)||(41224242-41224294)
chr3 (126-196)||(8362045-8362113)
chr3 (143-196)||(3137221-3137273)
chr3 (143-196)||(34482695-34482747)
chr3 (143-196)||(40328037-40328090)
chr3 (159-196)||(41883223-41883260)
chr3 (143-188)||(42921339-42921384)
chr3 (143-196)||(46919100-46919153)
chr3 (140-196)||(24343556-24343612)
chr3 (140-168)||(40327884-40327912)
[»] chr7 (22 HSPs)
chr7 (127-194)||(24394970-24395035)
chr7 (122-196)||(4974735-4974807)
chr7 (127-196)||(34482833-34482900)
chr7 (128-196)||(3961978-3962044)
chr7 (124-196)||(45637707-45637777)
chr7 (129-196)||(15577850-15577915)
chr7 (140-196)||(42611820-42611876)
chr7 (139-196)||(18036986-18037043)
chr7 (128-196)||(48880927-48880993)
chr7 (140-196)||(15329282-15329338)
chr7 (129-196)||(25167850-25167915)
chr7 (129-196)||(37477080-37477145)
chr7 (140-195)||(36790467-36790522)
chr7 (140-196)||(29737148-29737204)
chr7 (140-196)||(35444567-35444623)
chr7 (127-196)||(15238380-15238447)
chr7 (127-184)||(20010109-20010164)
chr7 (159-196)||(30848597-30848634)
chr7 (140-196)||(42696092-42696148)
chr7 (143-196)||(25167663-25167715)
chr7 (143-196)||(29737350-29737403)
chr7 (143-196)||(48880734-48880786)
[»] chr6 (20 HSPs)
chr6 (140-196)||(6127284-6127340)
chr6 (129-196)||(23291084-23291149)
chr6 (128-196)||(17705465-17705531)
chr6 (129-196)||(33695327-33695392)
chr6 (140-196)||(33696705-33696761)
chr6 (122-196)||(17176021-17176093)
chr6 (129-196)||(18365573-18365638)
chr6 (129-196)||(18370837-18370902)
chr6 (129-196)||(6031741-6031806)
chr6 (140-196)||(8515725-8515781)
chr6 (140-196)||(25986939-25986995)
chr6 (140-196)||(28675157-28675213)
chr6 (129-195)||(18889698-18889761)
chr6 (140-196)||(11548588-11548644)
chr6 (143-195)||(29693652-29693704)
chr6 (142-196)||(32702216-32702270)
chr6 (140-196)||(2309423-2309479)
chr6 (143-196)||(582534-582588)
chr6 (143-196)||(33696903-33696955)
chr6 (140-196)||(9752245-9752300)
[»] chr4 (38 HSPs)
chr4 (140-196)||(7745112-7745168)
chr4 (125-196)||(22199257-22199326)
chr4 (127-196)||(49387888-49387955)
chr4 (125-196)||(2624833-2624902)
chr4 (129-196)||(10442789-10442854)
chr4 (140-196)||(23964465-23964521)
chr4 (129-196)||(31078819-31078884)
chr4 (140-194)||(36072956-36073010)
chr4 (129-196)||(21802322-21802387)
chr4 (140-196)||(24128248-24128304)
chr4 (129-196)||(33530688-33530753)
chr4 (140-196)||(36073359-36073415)
chr4 (140-196)||(47290075-47290131)
chr4 (129-196)||(50156578-50156643)
chr4 (140-194)||(4751455-4751509)
chr4 (140-196)||(24392676-24392732)
chr4 (140-196)||(42671678-42671734)
chr4 (140-196)||(44893435-44893491)
chr4 (126-196)||(46441841-46441909)
chr4 (143-196)||(37219837-37219890)
chr4 (140-196)||(53123039-53123096)
chr4 (159-196)||(9088898-9088935)
chr4 (143-196)||(25063381-25063434)
chr4 (129-193)||(37934944-37935006)
chr4 (143-196)||(44893020-44893072)
chr4 (129-196)||(44893213-44893279)
chr4 (143-196)||(44893632-44893684)
chr4 (144-196)||(36073743-36073795)
chr4 (143-196)||(9089076-9089128)
chr4 (163-196)||(17655462-17655495)
chr4 (143-196)||(23964271-23964323)
chr4 (143-196)||(36073555-36073607)
chr4 (143-196)||(42671874-42671927)
chr4 (143-196)||(46442050-46442102)
chr4 (143-196)||(53123237-53123289)
chr4 (143-195)||(17655637-17655689)
chr4 (143-195)||(24128446-24128497)
chr4 (148-196)||(44744452-44744500)
[»] chr2 (22 HSPs)
chr2 (140-196)||(10661896-10661952)
chr2 (140-196)||(35160766-35160822)
chr2 (126-196)||(21936078-21936146)
chr2 (124-196)||(23268062-23268132)
chr2 (129-196)||(9293576-9293641)
chr2 (140-196)||(31174834-31174890)
chr2 (140-196)||(33380216-33380272)
chr2 (140-195)||(13354855-13354910)
chr2 (129-196)||(7475508-7475573)
chr2 (129-196)||(14941366-14941431)
chr2 (140-196)||(21393688-21393744)
chr2 (140-196)||(43330921-43330977)
chr2 (159-196)||(3989104-3989141)
chr2 (140-196)||(9723414-9723470)
chr2 (143-196)||(9723612-9723665)
chr2 (143-196)||(22591494-22591547)
chr2 (143-196)||(23267869-23267921)
chr2 (129-196)||(27847632-27847697)
chr2 (143-196)||(22592918-22592971)
chr2 (143-196)||(33380413-33380465)
chr2 (143-196)||(35160965-35161017)
chr2 (140-168)||(40262714-40262742)
[»] chr1 (22 HSPs)
chr1 (128-196)||(40214987-40215053)
chr1 (140-196)||(3559626-3559682)
chr1 (140-196)||(16045798-16045854)
chr1 (140-196)||(18404451-18404507)
chr1 (140-196)||(25463685-25463741)
chr1 (127-196)||(9910293-9910360)
chr1 (125-196)||(36966708-36966777)
chr1 (129-196)||(41876442-41876507)
chr1 (140-196)||(44094707-44094763)
chr1 (129-196)||(27523255-27523322)
chr1 (128-196)||(37821834-37821900)
chr1 (140-196)||(19015413-19015469)
chr1 (126-196)||(6883484-6883552)
chr1 (126-194)||(32000269-32000335)
chr1 (140-196)||(25973423-25973478)
chr1 (143-196)||(40273714-40273767)
chr1 (143-196)||(44690828-44690881)
chr1 (143-196)||(9910098-9910150)
chr1 (143-196)||(18404654-18404706)
chr1 (143-196)||(19015610-19015662)
chr1 (142-195)||(44691030-44691083)
chr1 (143-196)||(51737711-51737763)
[»] scaffold0665 (1 HSPs)
scaffold0665 (140-196)||(3077-3133)
[»] scaffold0204 (2 HSPs)
scaffold0204 (140-196)||(4405-4461)
scaffold0204 (143-196)||(4602-4654)
[»] scaffold0178 (2 HSPs)
scaffold0178 (118-196)||(11611-11686)
scaffold0178 (143-196)||(11827-11879)
[»] scaffold0228 (5 HSPs)
scaffold0228 (142-196)||(8413-8467)
scaffold0228 (142-196)||(15995-16049)
scaffold0228 (142-196)||(25947-26001)
scaffold0228 (143-196)||(16190-16242)
scaffold0228 (143-196)||(26142-26194)
[»] scaffold0471 (2 HSPs)
scaffold0471 (140-196)||(12851-12907)
scaffold0471 (143-195)||(13049-13100)
[»] scaffold0096 (1 HSPs)
scaffold0096 (140-196)||(41020-41076)
[»] scaffold0085 (1 HSPs)
scaffold0085 (144-196)||(47863-47915)


Alignment Details
Target: chr5 (Bit Score: 82; Significance: 7e-39; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 38580480 - 38580376
Alignment:
Q  21 caaacacatcacttttctattaacatcgttaatttttcgttaatatttaatgaggattcttgaattgctagtggtttgactaaagaaataacaaaataaa 120  Q
    ||||||||||||||||||||||||   |||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  38580480 caaacacatcacttttctattaac---gttaatttttcgttaacatttaatgaggattcttgaattgctagtgggatgactaaagaaataacaaaataaa 38580384  T
Q  121 tataatat 128  Q
    ||||||||    
T  38580383 tataatat 38580376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 11361199 - 11361131
Alignment:
Q  126 tatgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11361199 tatgagcaatgctatatat--caagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 11361131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 33584403 - 33584329
Alignment:
Q  120 atataatatgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||| |||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33584403 atatattatgagcaatgctatatat--caagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 33584329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 2477645 - 2477701
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2477645 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 2477701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 37321859 - 37321793
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37321859 gagcaatgctatatatct-aagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 37321793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 4892211 - 4892267
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4892211 tatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 4892267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 8145384 - 8145440
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8145384 tatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 8145440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 25398247 - 25398303
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25398247 tatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 25398303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 6043585 - 6043511
Alignment:
Q  120 atataatatgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||| || ||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  6043585 atatagtaagagcaatgctatatat--caagaaagattttatcaagaaaatttcaagaatgacatggaagaataatc 6043511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 14138677 - 14138733
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  14138677 tatatatcaagaaagattttatcaagaaaatttcaagaattacatggcagaataatc 14138733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 140 - 194
Target Start/End: Original strand, 3362787 - 3362841
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 194  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  3362787 tatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 3362841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 22913121 - 22913054
Alignment:
Q  127 atgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||  ||||||||||||| ||||||||| || |||||||||||||||||||||||    
T  22913121 atgagcaatgctatatat--caagaaagattttttcaagaaaaattcaagaatgacatggcagaataatc 22913054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 129 - 194
Target Start/End: Complemental strand, 38899791 - 38899728
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 194  Q
    ||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  38899791 gagcaatgctat--atatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 38899728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 3522062 - 3522006
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||| |||||||||||| || ||||||||||||||||||||    
T  3522062 tatatatcaagaaagattttttcaagaaaatttcaaaaatgacatggcagaataatc 3522006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 4434075 - 4434007
Alignment:
Q  126 tatgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||  ||||||||||||| | |||||||||| |||||||| ||||||||||||||    
T  4434075 tatgagcaatgctatatat--caagaaagatttttttaagaaaatttcaagaatgatatggcagaataatc 4434007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 128 - 194
Target Start/End: Original strand, 12850800 - 12850864
Alignment:
Q  128 tgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 194  Q
    ||||||||||||||  ||||||||||||||||||||||||||||  || ||||||||||||||||||    
T  12850800 tgagcaatgctata--tatcaagaaagattttatcaagaaaattccaaaaatgacatggcagaataa 12850864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 17545752 - 17545685
Alignment:
Q  127 atgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||  ||||||| | ||| ||||||||| || |||||||||||||||||||||||    
T  17545752 atgagcaatgctatatat--caagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatc 17545685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 10458409 - 10458462
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||| ||||||||||||||| || ||||||||||||||| |||||||    
T  10458409 atatcaagaaaaattttatcaagaaaaattcaagaatgacatggcaaaataatc 10458462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 3521814 - 3521866
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  3521814 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 3521866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 6043319 - 6043371
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  6043319 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 6043371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 12614798 - 12614733
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  ||||||||||| ||||||||||||||  || |||||||||||| || |||||||    
T  12614798 gagcaatgctat--atatcaagaaatattttatcaagaaagattcaagaatgacatgacataataatc 12614733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 186
Target Start/End: Original strand, 27481843 - 27481881
Alignment:
Q  148 aagaaagattttatcaagaaaattttaagaatgacatgg 186  Q
    |||||||||||||||||||||| || |||||||||||||    
T  27481843 aagaaagattttatcaagaaaaattcaagaatgacatgg 27481881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 4892460 - 4892408
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  4892460 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 4892408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 12614544 - 12614597
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||| | ||||||||||| |||  |||||||||||||||||| |||||||    
T  12614544 atatcaagtatgattttatcaaaaaagatttaagaatgacatggcacaataatc 12614597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 33584136 - 33584188
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  33584136 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 33584188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 3e-25; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 32393856 - 32393923
Alignment:
Q  127 atgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32393856 atgagcaatgctata--tatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 32393923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 35353036 - 35353106
Alignment:
Q  124 aatatgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35353036 aatatgagcaatgctata--tatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 35353106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 42755099 - 42755042
Alignment:
Q  139 atatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42755099 atatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 42755042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 1646030 - 1645965
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1646030 gagcaatgctat--atatcaagaaagattttatcaagaaaattttaagaaagacatggcagaataatc 1645965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 14128873 - 14128929
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14128873 tatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatc 14128929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 32064754 - 32064810
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32064754 tatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 32064810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 34665391 - 34665447
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34665391 tatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 34665447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 37986111 - 37986055
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  37986111 tatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 37986055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 38016980 - 38017036
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38016980 tatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 38017036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 6108289 - 6108233
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  6108289 tatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatc 6108233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 17841915 - 17841850
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  ||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  17841915 gagcaatgctat--atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 17841850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 20091866 - 20091801
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  ||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  20091866 gagcaatgctat--atatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 20091801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 24211618 - 24211553
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  |||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  24211618 gagcaatgctat--atatcaagaaagattttatcaagaaaatttcaagaatggcatggcagaataatc 24211553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 40780194 - 40780129
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  ||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  40780194 gagcaatgctat--atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 40780129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 15187569 - 15187624
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 195  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  15187569 tatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 15187624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 26042186 - 26042116
Alignment:
Q  124 aatatgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||| ||||||||||||||||   ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  26042186 aataagagcaatgctatatatt--aagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 26042116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 37132724 - 37132658
Alignment:
Q  128 tgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||  ||| ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  37132724 tgagcaatgctatatat--caaaaaatattttatcaagaaaaatttaagaatgacatggcagaataatc 37132658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 39772857 - 39772801
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||    
T  39772857 tatatatcaagaaatattttatcaaaaaaatttcaagaatgacatggcagaataatc 39772801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 41819834 - 41819778
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||    
T  41819834 tatatatcaagaaagattttatcaagaatgttttaagaatgatatggcagaataatc 41819778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 8453843 - 8453899
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||| |||||||||||| |||||||||||| || |||||||    
T  8453843 tatatatcaagaaagattttttcaagaaaatttcaagaatgacatgacaaaataatc 8453899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 31347847 - 31347782
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  ||||||||||| ||||| ||||||||| || |||||||||||||||||||||||    
T  31347847 gagcaatgctat--atatcaagaaatattttctcaagaaaaattcaagaatgacatggcagaataatc 31347782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 141 - 196
Target Start/End: Original strand, 7021988 - 7022043
Alignment:
Q  141 atatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||| ||||||||| || |||||||| ||||||||||||||    
T  7021988 atatatcaagaaagattttctcaagaaaaattcaagaatgatatggcagaataatc 7022043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 7017930 - 7017865
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  |||||| |||||||||| | ||||||| || |||||||||||||||||||||||    
T  7017930 gagcaatgctat--atatcatgaaagattttcttaagaaaaattcaagaatgacatggcagaataatc 7017865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 25581295 - 25581239
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||| |||||  |||||||||| ||||||||||||||| |||||||    
T  25581295 tatatatcaagaaagtttttacgaagaaaatttcaagaatgacatggcaaaataatc 25581239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 27782173 - 27782117
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||| ||||||||||||||  || || ||||||||||||||||||||    
T  27782173 tatatatcaagaaatattttatcaagaaagattcaataatgacatggcagaataatc 27782117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 30835102 - 30835047
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||| | |||| || |||||||||||||||||||||||    
T  30835102 tatatatcaagaaagattttatcga-aaaaattcaagaatgacatggcagaataatc 30835047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 3890421 - 3890474
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||||||||||  || |||||||| ||||||||||||||    
T  3890421 atatcaagaatgattttatcaagaaagattcaagaatgatatggcagaataatc 3890474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 143 - 194
Target Start/End: Complemental strand, 1886672 - 1886621
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 194  Q
    |||||||||| |||||||||||||||  || ||||||||| |||||||||||    
T  1886672 atatcaagaatgattttatcaagaaagattcaagaatgacgtggcagaataa 1886621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 30834862 - 30834913
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 194  Q
    |||||||||| |||||||||||||||  || |||||||||||| ||||||||    
T  30834862 atatcaagaatgattttatcaagaaagattaaagaatgacatgacagaataa 30834913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 35353300 - 35353247
Alignment:
Q  142 tatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  35353300 tatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 35353247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 1503650 - 1503702
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  1503650 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 1503702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 3596848 - 3596900
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  3596848 atatcaagaatgattttat-aagaaaaatttaagaatgatatggcacaataatc 3596900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 3890653 - 3890616
Alignment:
Q  159 tatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||| || |||||||||||||||||||||||    
T  3890653 tatcaagaaaaattcaagaatgacatggcagaataatc 3890616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 17841657 - 17841709
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  17841657 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 17841709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 24844667 - 24844720
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||| || |||||||||||||||  |||||||||| ||||||| |||||||    
T  24844667 atatcaataatgattttatcaagaaagatttaagaatggcatggcaaaataatc 24844720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 26041920 - 26041972
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  26041920 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 26041972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 27835519 - 27835453
Alignment:
Q  128 tgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||  ||| |||||| |||| ||||||| || ||||||||||||| | |||||||    
T  27835519 tgagcaatgctatatat--caataaagatcttattaagaaaaattcaagaatgacatggtaaaataatc 27835453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 32065004 - 32064952
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  32065004 atatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataatc 32064952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 40779936 - 40779988
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  40779936 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 40779988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 42754849 - 42754901
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| |||||||||||||||| | |||||||    
T  42754849 atatcaagaatgattttat-aagaaaaatttaagaatgacatggtacaataatc 42754901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 195
Target Start/End: Complemental strand, 3597078 - 3597042
Alignment:
Q  159 tatcaagaaaattttaagaatgacatggcagaataat 195  Q
    |||||||||| ||| ||||||||||||||||||||||    
T  3597078 tatcaagaaagtttcaagaatgacatggcagaataat 3597042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 3e-25; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 37217120 - 37217053
Alignment:
Q  127 atgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37217120 atgagcaatgctatatat--caagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 37217053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 3574597 - 3574527
Alignment:
Q  124 aatatgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3574597 aataagagcaatgctatatat--caagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 3574527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 2754726 - 2754782
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2754726 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 2754782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 3456060 - 3456129
Alignment:
Q  125 atatgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3456060 atatgagcaatgctata--tatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatc 3456129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 11347277 - 11347332
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11347277 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 11347332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 48160903 - 48160970
Alignment:
Q  127 atgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  48160903 atgagcaatgctata--tatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatc 48160970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 19650956 - 19650900
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19650956 tatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 19650900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 6041882 - 6041949
Alignment:
Q  127 atgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  6041882 atgagcaatgctata--tatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 6041949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 8320640 - 8320584
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  8320640 tatatatcaagaaagattttatcaagaaaattttaagaatgatatggcaaaataatc 8320584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 22426400 - 22426344
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22426400 tatatattaagaaagattttatcaagaaaattttaaaaatgacatggcagaataatc 22426344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 117 - 196
Target Start/End: Original strand, 30384999 - 30385076
Alignment:
Q  117 taaatataatatgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||| || |||||||||||||| |||  |||||||||||||||||||||||||| || ||||||||||||||||||||    
T  30384999 taaataaaagatgagcaatgctatttat--caagaaagattttatcaagaaaatttcaaaaatgacatggcagaataatc 30385076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 37522062 - 37522118
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  37522062 tatatatcaagaaagattttttcaagaaaattttaagaatgacatgacagaataatc 37522118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 128 - 185
Target Start/End: Original strand, 42921137 - 42921197
Alignment:
Q  128 tgagcaatgctatatat---atcaagaaagattttatcaagaaaattttaagaatgacatg 185  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||    
T  42921137 tgagcaatgctatatattatatcaagaaagattttatcaagaaaattttaagaatgacatg 42921197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 33145712 - 33145777
Alignment:
Q  128 tgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||  ||||||||||||||| || |||||||||||||||||||||||||||||||    
T  33145712 tgagcaatgctatatat--caagaaagattttattaa-aaaattttaagaatgacatggcagaataatc 33145777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 185
Target Start/End: Original strand, 42297362 - 42297407
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatg 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  42297362 tatatatcaagaaagattttatcaagaaaattttaagaatgacatg 42297407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 3137479 - 3137414
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  ||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  3137479 gagcaatgctat--atatcaagaaagattttttcaagaaaatttcaagaatgacatggcaaaataatc 3137414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 9797085 - 9797029
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||| ||||||||| || |||||||||||||||||||||||    
T  9797085 tatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatc 9797029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 33113802 - 33113858
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||    
T  33113802 tatatatcaagaaagattttattaagaaaatttcaagaattacatggcagaataatc 33113858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 34482975 - 34482910
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  ||||||||||||||||| |||||||||||| |||||||| |||| |||||||||    
T  34482975 gagcaatgctat--atatcaagaaagattttttcaagaaaatttcaagaatgatatggtagaataatc 34482910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 36865092 - 36865027
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  |||| ||| |||||||||| |||||||||||||||||||||||| |||||||||    
T  36865092 gagcaatgctat--atattaaggaagattttattaagaaaattttaagaatgacatggtagaataatc 36865027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 33839540 - 33839596
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||| ||||||||||||||||| |||| ||||||||| ||||| ||||||||||    
T  33839540 tatatattaagaaagattttatcaaaaaaaatttaagaataacatgacagaataatc 33839596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 47738117 - 47738169
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 195  Q
    ||||||||||||||||||||||||||  || |||||||| |||||||||||||    
T  47738117 atatcaagaaagattttatcaagaaatattcaagaatgatatggcagaataat 47738169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 194
Target Start/End: Original strand, 26612794 - 26612848
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 194  Q
    |||||||||| ||||||||||| || |||| || |||||||||||||||||||||    
T  26612794 tatatatcaaaaaagattttataaaaaaaaattcaagaatgacatggcagaataa 26612848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 37522311 - 37522259
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  37522311 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcataataatc 37522259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 47738370 - 47738317
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||||||||||  || ||||||||||||||| |||||||    
T  47738370 atatcaagaatgattttatcaagaaagattcaagaatgacatggcacaataatc 47738317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 33839797 - 33839741
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||| |||||||||||||||  || |||||||||||| || |||||||    
T  33839797 tatatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 33839741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 41224242 - 41224294
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaat 192  Q
    ||||||| |||||||||||| ||||||||| || ||||||||||||| |||||    
T  41224242 tatatattaagaaagattttctcaagaaaaattcaagaatgacatggtagaat 41224294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 8362113 - 8362045
Alignment:
Q  126 tatgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||  ||||||| |   | ||||||||| || |||||||||||||||||||||||    
T  8362113 tatgagcaatgctatatat--caagaaaaaaaatttcaagaaaaattcaagaatgacatggcagaataatc 8362045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 3137221 - 3137273
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  3137221 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 3137273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 34482695 - 34482747
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  34482695 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 34482747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 40328090 - 40328037
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||||||||||  || |||||||||||| || |||||||    
T  40328090 atatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 40328037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 159 - 196
Target Start/End: Complemental strand, 41883260 - 41883223
Alignment:
Q  159 tatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||| || |||||||||||||||||||||||    
T  41883260 tatcaagaaaaattcaagaatgacatggcagaataatc 41883223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 188
Target Start/End: Complemental strand, 42921384 - 42921339
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggca 188  Q
    |||| ||||| |||||||||||||||  ||||||||||||||||||    
T  42921384 atattaagaatgattttatcaagaaatatttaagaatgacatggca 42921339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 46919153 - 46919100
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| ||||||||||| |||  || || ||||||||||||||||||||    
T  46919153 atatcaagaatgattttatcaaaaaagattcaataatgacatggcagaataatc 46919100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 24343556 - 24343612
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||| |||||||||||||||||||||| || || | | | ||||||||||||||    
T  24343556 tatatattaagaaagattttatcaagaaaaattcaaaattaatatggcagaataatc 24343612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 168
Target Start/End: Original strand, 40327884 - 40327912
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaa 168  Q
    |||||||||||||||||||||||||||||    
T  40327884 tatatatcaagaaagattttatcaagaaa 40327912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 5e-24; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 127 - 194
Target Start/End: Original strand, 24394970 - 24395035
Alignment:
Q  127 atgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 194  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24394970 atgagcaatgctata--tatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 24395035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 4974807 - 4974735
Alignment:
Q  122 ataatatgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||| ||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4974807 ataaaatgagcaatgctatatat--caagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 4974735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 34482833 - 34482900
Alignment:
Q  127 atgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34482833 atgagcaatgctata--tatcaagaaagattttattaagaaaattttaagaatgacatggcagaataatc 34482900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 3961978 - 3962044
Alignment:
Q  128 tgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3961978 tgagcaatgctata--tatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatc 3962044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 124 - 196
Target Start/End: Original strand, 45637707 - 45637777
Alignment:
Q  124 aatatgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||| |||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  45637707 aataagagcaatgctata--tatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 45637777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 15577915 - 15577850
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15577915 gagcaatgctat--atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 15577850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 42611820 - 42611876
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42611820 tatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 42611876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 18036986 - 18037043
Alignment:
Q  139 atatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  18036986 atatatatcaagaaagattttttcaagaaaaatttaagaatgacatggcagaataatc 18037043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 48880993 - 48880927
Alignment:
Q  128 tgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||  |||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  48880993 tgagcaatgctatatat--caagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 48880927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 15329282 - 15329338
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  15329282 tatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 15329338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 25167915 - 25167850
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  ||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  25167915 gagcaatgctat--atatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatc 25167850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 37477145 - 37477080
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  37477145 gagcaatgctat--atatcaagaaagattttctcaagaaaaatttaagaatgacatggcagaataatc 37477080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 195
Target Start/End: Complemental strand, 36790522 - 36790467
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 195  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  36790522 tatatatcaagaaagtttttatcaagaaaaatttaagaatgacatggcagaataat 36790467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 29737148 - 29737204
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||| | |||||||||||||||||||||||| |||||||||    
T  29737148 tatatatcaagaaagatttttttaagaaaattttaagaatgacatggtagaataatc 29737204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 35444567 - 35444623
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  35444567 tatatattaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 35444623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 196
Target Start/End: Original strand, 15238380 - 15238447
Alignment:
Q  127 atgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||  |||||||||| | ||| ||||||||| || |||||||||||||||||||||||    
T  15238380 atgagcaatgctata--tatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatc 15238447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 20010164 - 20010109
Alignment:
Q  127 atgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacat 184  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||| |||||||||||    
T  20010164 atgagcaatgctatatat--caagaaagattttatcaaaaaaatttcaagaatgacat 20010109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 30848597 - 30848634
Alignment:
Q  159 tatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30848597 tatcaagaaaattttaagaatgacatggcagaataatc 30848634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 42696092 - 42696148
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||||| || ||  ||||||||||||||| |||||||||||    
T  42696092 tatatatcaagaaagattttattaaaaattttttaagaatgacatagcagaataatc 42696148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 25167663 - 25167715
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  25167663 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 25167715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 29737403 - 29737350
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||||||||||  ||||||||| ||||| || |||||||    
T  29737403 atatcaagaatgattttatcaagaaagatttaagaataacatgtcacaataatc 29737350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 48880734 - 48880786
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  48880734 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 48880786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 5e-24; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 6127284 - 6127340
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6127284 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 6127340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 23291149 - 23291084
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23291149 gagcaatgctat--atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 23291084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 17705531 - 17705465
Alignment:
Q  128 tgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17705531 tgagcaatgctatatat--caagaaagattttatcaagaaaattttaagaatgacatgacagaataatc 17705465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 33695392 - 33695327
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33695392 gagcaatgctat--atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 33695327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 33696705 - 33696761
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33696705 tatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 33696761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 122 - 196
Target Start/End: Complemental strand, 17176093 - 17176021
Alignment:
Q  122 ataatatgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||||| |||||||||||| ||||||||||    
T  17176093 ataatatgagcaatgctatatat--caagaaagattttatcaataaaatttcaagaatgacatgacagaataatc 17176021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 18365638 - 18365573
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  |||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  18365638 gagcaatgctat--atatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 18365573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 18370902 - 18370837
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  |||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  18370902 gagcaatgctat--atatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 18370837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 6031806 - 6031741
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  |||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  6031806 gagcaatgctat--atatcaagaaagatttcatcaataaaattttaagaatgacatgacagaataatc 6031741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 8515781 - 8515725
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||    
T  8515781 tatatatcaagaaagattttatcaagacagatttaagaatgacatggcagaataatc 8515725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 25986939 - 25986995
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||    
T  25986939 tatatatcaagaaagattttattaagaaaatttcaagaatgacatggcaaaataatc 25986995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 28675157 - 28675213
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||    
T  28675157 tatatatcaagaaagattttatcaagaaaatttcaagaatgacatgtcggaataatc 28675213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 18889761 - 18889698
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 195  Q
    ||||||||||||  ||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  18889761 gagcaatgctat--atatcaagaaaga-tttatcaagaaaatttcaagaatgacatggcagaataat 18889698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 11548644 - 11548588
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||| ||||| ||||||||| || |||||||||||||||||||||||    
T  11548644 tatatatcaagaaaaattttctcaagaaaaattcaagaatgacatggcagaataatc 11548588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 29693704 - 29693652
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 195  Q
    |||||||||| |||||||||||||||  |||||||||||||||||||||||||    
T  29693704 atatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataat 29693652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 32702216 - 32702270
Alignment:
Q  142 tatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||| ||| |||||||| |||||||| ||||||||||||||    
T  32702216 tatatcaagaaagattttttcatgaaaatttcaagaatgatatggcagaataatc 32702270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 2309479 - 2309423
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||| |   ||||||||||| |||||||||||||||    
T  2309479 tatatatcaagaaagattttatcaaaatttttttaagaatggcatggcagaataatc 2309423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 582534 - 582588
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacat-ggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| ||||||||||| || ||||||||||||    
T  582534 atatcaagaatgattttattaagaaaaatttaagaatgatatgggcagaataatc 582588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 33696955 - 33696903
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||    
T  33696955 atatcaagaatgattttat-aagaaagatttaagaatgacatggcacaataatc 33696903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 9752300 - 9752245
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||| | || |||||||||| || |||||||| ||||||||||||||    
T  9752300 tatatatcaagaaaaaatt-atcaagaaaaattcaagaatgatatggcagaataatc 9752245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 5e-24; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 7745168 - 7745112
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7745168 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 7745112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 22199257 - 22199326
Alignment:
Q  125 atatgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22199257 atatgagcaatgctata--tatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 22199326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 49387955 - 49387888
Alignment:
Q  127 atgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  49387955 atgagcaatgctatatat--caagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 49387888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 2624833 - 2624902
Alignment:
Q  125 atatgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  2624833 atatgagcaatgctata--tatcaagaaagattttatcaagaaaatttcaagaatgaaatggcagaataatc 2624902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 10442854 - 10442789
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  10442854 gagcaatgctat--atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 10442789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 23964521 - 23964465
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23964521 tatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 23964465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 31078884 - 31078819
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31078884 gagcaatgctat--atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 31078819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 194
Target Start/End: Original strand, 36072956 - 36073010
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 194  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  36072956 tatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataa 36073010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 21802387 - 21802322
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  ||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  21802387 gagcaatgctat--atatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 21802322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 24128248 - 24128304
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  24128248 tatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 24128304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 33530753 - 33530688
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  ||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  33530753 gagcaatgctat--atatcaagaaagattttatcaagaaaaattcaagaatgacatggcagaataatc 33530688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 36073359 - 36073415
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  36073359 tatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 36073415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 47290075 - 47290131
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  47290075 tatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 47290131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 50156643 - 50156578
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  |||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  50156643 gagcaatgctat--atattaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 50156578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 140 - 194
Target Start/End: Original strand, 4751455 - 4751509
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 194  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  4751455 tatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 4751509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 24392676 - 24392732
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||| ||||||||| || |||||||||||||||||||||||    
T  24392676 tatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatc 24392732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 42671678 - 42671734
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||    
T  42671678 tatatatcaataaagattttatcaaaaaaaatttaagaatgacatggcagaataatc 42671734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 44893435 - 44893491
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||    
T  44893435 tatatatcaagaaagattttttcaaaaaaatttcaagaatgacatggcagaataatc 44893491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 46441841 - 46441909
Alignment:
Q  126 tatgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||  |||||||||||||||| | |||||||||| ||||||||||||||| |||||||    
T  46441841 tatgagcaatgctata--tatcaagaaagatttttttaagaaaatttcaagaatgacatggcaaaataatc 46441909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 37219890 - 37219837
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||||||||||  ||||||||||||||||||||||||||    
T  37219890 atatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatc 37219837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 53123039 - 53123096
Alignment:
Q  140 tatatatcaagaaagattttatcaa-gaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||    
T  53123039 tatatatcaagaaagattttttcaaagaaaatttcaagaatgacatggcagaataatc 53123096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 9088898 - 9088935
Alignment:
Q  159 tatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||| |||||||||||||||||||||||    
T  9088898 tatcaagaaaatttcaagaatgacatggcagaataatc 9088935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 25063381 - 25063434
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||||||||||  || ||||||||||||| |||||||||    
T  25063381 atatcaagaatgattttatcaagaaagattcaagaatgacatggtagaataatc 25063434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 193
Target Start/End: Complemental strand, 37935006 - 37934944
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaata 193  Q
    ||||||||||||  ||||||| |||||||||||||| ||||| | ||||||||||||| ||||||    
T  37935006 gagcaatgctat--atatcaaaaaagattttatcaaaaaaatgtcaagaatgacatggtagaata 37934944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 44893020 - 44893072
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  44893020 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 44893072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 44893279 - 44893213
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatc-aagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  |||| |||||||||||| || || ||||||| |||||||||||||||||||||||    
T  44893279 gagcaatgctat--atattaagaaagattttttcaaaaaaaatttcaagaatgacatggcagaataatc 44893213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 44893684 - 44893632
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  44893684 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 44893632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 36073795 - 36073743
Alignment:
Q  144 tatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||| ||||||  ||||||||||||||| || |||||||    
T  36073795 tatcaagaaagattttatgaagaaagatttaagaatgacatgacaaaataatc 36073743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 9089128 - 9089076
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  9089128 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 9089076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 17655462 - 17655495
Alignment:
Q  163 aagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||||||||||||||||||    
T  17655462 aagaaaatttcaagaatgacatggcagaataatc 17655495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 23964271 - 23964323
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||    
T  23964271 atatcaagaatgattttat-aagaaagatttaagaatgacatggcataataatc 23964323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 36073607 - 36073555
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  36073607 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 36073555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 42671927 - 42671874
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||||||||||  || |||||||||||| || |||||||    
T  42671927 atatcaagaatgattttatcaagaaagattcaagaatgacatgacataataatc 42671874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 46442102 - 46442050
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  46442102 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 46442050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 53123289 - 53123237
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  53123289 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 53123237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 17655689 - 17655637
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 195  Q
    |||| ||||| |||||||||||||||  ||||||||||||||| || ||||||    
T  17655689 atattaagaatgattttatcaagaaagatttaagaatgacatgacataataat 17655637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 24128497 - 24128446
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 195  Q
    |||||||||| |||||||| ||||||| ||||||||||||||| || ||||||    
T  24128497 atatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataat 24128446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 44744452 - 44744500
Alignment:
Q  148 aagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||| ||||||  ||||| |||||||||| |||||||||    
T  44744452 aagaaagattttattaagaaatatttaaaaatgacatggtagaataatc 44744500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 5e-24; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 10661896 - 10661952
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10661896 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 10661952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 35160766 - 35160822
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35160766 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 35160822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 21936078 - 21936146
Alignment:
Q  126 tatgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  21936078 tatgagcaatgctata--tatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 21936146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 124 - 196
Target Start/End: Complemental strand, 23268132 - 23268062
Alignment:
Q  124 aatatgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||| ||||||||||||||||  ||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  23268132 aataagagcaatgctatatat--caagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 23268062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 9293641 - 9293576
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  |||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  9293641 gagcaatgctat--atatcaagaaagattttatcaagaaattttcaagaatgacatggcagaataatc 9293576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 31174890 - 31174834
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  31174890 tatatatcaagaaagattttattaagaaaatttcaagaatgacatggcagaataatc 31174834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 33380216 - 33380272
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  33380216 tatatatcaagaaagattttttcaagaaaattttaagaatgacatggctgaataatc 33380272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 13354855 - 13354910
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 195  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  13354855 tatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 13354910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 7475573 - 7475508
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  ||||||||||||||||| |||||||||||| ||||||||||||  |||||||||    
T  7475573 gagcaatgctat--atatcaagaaagattttttcaagaaaatttcaagaatgacatgatagaataatc 7475508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 14941431 - 14941366
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  ||||||||||||||||||| ||||||  || |||||||||||||||||||||||    
T  14941431 gagcaatgctat--atatcaagaaagattttattaagaaagattcaagaatgacatggcagaataatc 14941366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 21393744 - 21393688
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||| ||||| ||||||||| |||||||||||||||| |||||||||    
T  21393744 tatatatcaagaaaaattttctcaagaaaaatttaagaatgacatggtagaataatc 21393688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 43330921 - 43330977
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||| |||| |||| || |||||||||||||||||||||||    
T  43330921 tatatatcaagaaagattttctcaaaaaaaattcaagaatgacatggcagaataatc 43330977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 196
Target Start/End: Original strand, 3989104 - 3989141
Alignment:
Q  159 tatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||||||||||||||||    
T  3989104 tatcaagaaaattttaagaatgacatggcagaataatc 3989141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 9723414 - 9723470
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||| |||||||||||||| ||||||  ||||||||||||||| ||||||||||    
T  9723414 tatatattaagaaagattttattaagaaagatttaagaatgacatgacagaataatc 9723470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 9723665 - 9723612
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| ||||| |||||||||  ||||||||||||||| ||||||||||    
T  9723665 atatcaagaatgatttgatcaagaaatatttaagaatgacatgacagaataatc 9723612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 22591494 - 22591547
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||| || |||| || |||||||| ||||||||||||||    
T  22591494 atatcaagaaagattttattaaaaaaaattcaagaatgatatggcagaataatc 22591547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 23267869 - 23267921
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  23267869 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 23267921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 27847632 - 27847697
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| ||||||  |||||||||||||| ||||||  || |||||||||||| ||||||||||    
T  27847632 gagcaatgctgtatata--aagaaagattttattaagaaagattcaagaatgacatgacagaataatc 27847697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 22592971 - 22592918
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||||||||||  || |||||||||||| || |||||||    
T  22592971 atatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 22592918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 33380465 - 33380413
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  33380465 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 33380413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 35161017 - 35160965
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  35161017 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 35160965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 168
Target Start/End: Complemental strand, 40262742 - 40262714
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaa 168  Q
    |||||||||||||||||||||||||||||    
T  40262742 tatatatcaagaaagattttatcaagaaa 40262714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 3e-22; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 128 - 196
Target Start/End: Original strand, 40214987 - 40215053
Alignment:
Q  128 tgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40214987 tgagcaatgctata--tatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 40215053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 3559626 - 3559682
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3559626 tatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 3559682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 16045854 - 16045798
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16045854 tatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 16045798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 18404451 - 18404507
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18404451 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggtagaataatc 18404507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 25463685 - 25463741
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25463685 tatatatcaagaaagattttatgaagaaaattttaagaatgacatggcagaataatc 25463741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 9910360 - 9910293
Alignment:
Q  127 atgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  9910360 atgagcaatgctatatat--caagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 9910293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 125 - 196
Target Start/End: Complemental strand, 36966777 - 36966708
Alignment:
Q  125 atatgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||  ||||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  36966777 atatgagcaatgctatatat--caagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 36966708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 41876507 - 41876442
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||  ||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  41876507 gagcaatgctat--atatcaagaaagattttttcaaaaaaattttaagaatgacatggcagaataatc 41876442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 44094707 - 44094763
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  44094707 tatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 44094763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 27523322 - 27523255
Alignment:
Q  129 gagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||| ||||||||  ||||||||||||||| ||||||||||||||| ||||||||||    
T  27523322 gagcaatgctatatacatcaagaacaattttatcaagaaaaatttaagaatgacatgacagaataatc 27523255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 196
Target Start/End: Complemental strand, 37821900 - 37821834
Alignment:
Q  128 tgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||  ||||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  37821900 tgagcaatgctatatat--caagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 37821834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 19015413 - 19015469
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  19015413 tatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 19015469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 6883484 - 6883552
Alignment:
Q  126 tatgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||   |||||||||||| | |||||||||| |||||||||||||||||||||||    
T  6883484 tatgagcaatgctatatatt--aagaaagatttttttaagaaaatttcaagaatgacatggcagaataatc 6883552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 32000335 - 32000269
Alignment:
Q  126 tatgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 194  Q
    |||||||||||||||||||  ||||||||||||| ||||||||| || |||||||||||| ||||||||    
T  32000335 tatgagcaatgctatatat--caagaaagattttctcaagaaaaattcaagaatgacatgacagaataa 32000269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 25973423 - 25973478
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  25973423 tatatatcaagaaagattttatcatgaaaatttcaagaatgaca-ggcagaataatc 25973478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 40273714 - 40273767
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||| ||||||||| || |||||||||||| || |||||||    
T  40273714 atatcaagaaagattttttcaagaaaaattcaagaatgacatgtcaaaataatc 40273767  T

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Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 44690828 - 44690881
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||| || |||||||||||||||  || |||||||||||||||||||||||    
T  44690828 atatcaataatgattttatcaagaaagattcaagaatgacatggcagaataatc 44690881  T

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Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 9910098 - 9910150
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  9910098 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 9910150  T

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Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 18404706 - 18404654
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||  |||||||||||||||||| |||||||    
T  18404706 atatcaagaatgattttat-aagaaagatttaagaatgacatggcacaataatc 18404654  T

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Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 19015662 - 19015610
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  19015662 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 19015610  T

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Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 44691083 - 44691030
Alignment:
Q  142 tatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 195  Q
    |||||||||||||||||||| || |||  || |||||| |||||||||||||||    
T  44691083 tatatcaagaaagattttataaaaaaagattcaagaattacatggcagaataat 44691030  T

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Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 51737763 - 51737711
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  51737763 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 51737711  T

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Target: scaffold0665 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 3077 - 3133
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3077 tatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatc 3133  T

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Target: scaffold0204 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 4405 - 4461
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4405 tatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 4461  T

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Target: scaffold0204; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 4654 - 4602
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  4654 atatcaagaatgattttat-aagaaaaatttaagaatgatatggcacaataatc 4602  T

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Target: scaffold0178 (Bit Score: 52; Significance: 5e-21; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 11611 - 11686
Alignment:
Q  118 aaatataatatgagcaatgctatatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||| ||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  11611 aaatataat-tgagcaatgctata--tatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 11686  T

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Target: scaffold0178; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 11879 - 11827
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  11879 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 11827  T

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Target: scaffold0228 (Bit Score: 51; Significance: 2e-20; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 8413 - 8467
Alignment:
Q  142 tatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8413 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 8467  T

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Target: scaffold0228; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 15995 - 16049
Alignment:
Q  142 tatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15995 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 16049  T

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Target: scaffold0228; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 25947 - 26001
Alignment:
Q  142 tatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25947 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 26001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 16242 - 16190
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  16242 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 16190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 26194 - 26142
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  26194 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 26142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 12851 - 12907
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  12851 tatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 12907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 13100 - 13049
Alignment:
Q  143 atatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 195  Q
    |||||||||| |||||||| ||||||| ||||||||||||||| || ||||||    
T  13100 atatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataat 13049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 41020 - 41076
Alignment:
Q  140 tatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  41020 tatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 41076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 47863 - 47915
Alignment:
Q  144 tatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 196  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  47863 tatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 47915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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