View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8795_high_6 (Length: 266)
Name: NF8795_high_6
Description: NF8795
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8795_high_6 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 13 - 266
Target Start/End: Original strand, 43199527 - 43199780
Alignment:
| Q |
13 |
agcagagaagacaggtactccaaaataaaaatgggaaaggagattcctcaaacacaagcaattctcaactgtatcgacctctccaatcctaacatcgacc |
112 |
Q |
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| T |
43199527 |
agcagagaagacaggtactccaaaataaaaatgggaaaggagattcctcaaacacaagcaattctcaactgtatcgacctctccaatcctaacatcgacc |
43199626 |
T |
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| Q |
113 |
ataacgttgatttactcaaacaggtaaacacactaaaacgaattcattctcttatcctttctgtttgttattactactgctactgacaagtaagaagaca |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43199627 |
ataacgttgatttactcaaacaggtaaacacactaaaacaaattcattctcttatcctttctgtttgttattactactgctactgacaagtaagaagaca |
43199726 |
T |
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| Q |
213 |
ctcataaatttctttctaatttacgttccgtggcgaataactaaagtcttgcac |
266 |
Q |
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| T |
43199727 |
ctcataaatttctttctaatttacgttccgtggcgaataactaaagtcttgcac |
43199780 |
T |
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