View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8796_low_3 (Length: 283)

Name: NF8796_low_3
Description: NF8796
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8796_low_3
NF8796_low_3
[»] chr1 (55 HSPs)
chr1 (19-148)||(12504878-12505003)
chr1 (162-256)||(51760056-51760150)
chr1 (167-256)||(20171167-20171256)
chr1 (167-253)||(20170694-20170780)
chr1 (167-257)||(37694675-37694765)
chr1 (162-256)||(47511384-47511478)
chr1 (162-256)||(47512089-47512183)
chr1 (167-256)||(51760677-51760766)
chr1 (168-257)||(52371756-52371845)
chr1 (168-256)||(25866569-25866657)
chr1 (162-256)||(25866677-25866771)
chr1 (162-256)||(52371000-52371094)
chr1 (168-253)||(20170583-20170668)
chr1 (167-256)||(27114814-27114903)
chr1 (167-256)||(32824030-32824119)
chr1 (167-256)||(47511498-47511587)
chr1 (167-256)||(51760568-51760657)
chr1 (168-256)||(25866085-25866173)
chr1 (162-253)||(25865971-25866062)
chr1 (167-257)||(27114705-27114795)
chr1 (167-256)||(32824139-32824228)
chr1 (167-256)||(46280776-46280865)
chr1 (162-246)||(32823475-32823559)
chr1 (162-249)||(4388010-4388097)
chr1 (167-253)||(47511980-47512066)
chr1 (167-253)||(51760173-51760259)
chr1 (167-256)||(20171058-20171147)
chr1 (168-256)||(39195011-39195099)
chr1 (162-241)||(39193598-39193677)
chr1 (162-252)||(28309779-28309869)
chr1 (162-256)||(52371114-52371208)
chr1 (167-234)||(32823568-32823635)
chr1 (162-208)||(27115505-27115551)
chr1 (162-210)||(28999857-28999905)
chr1 (167-226)||(26054919-26054978)
chr1 (162-253)||(43190506-43190597)
chr1 (162-228)||(3979346-3979412)
chr1 (162-241)||(25035375-25035454)
chr1 (162-241)||(25040588-25040667)
chr1 (162-205)||(25432513-25432556)
chr1 (162-228)||(3978061-3978127)
chr1 (168-238)||(43189581-43189651)
chr1 (162-242)||(9575250-9575330)
chr1 (162-226)||(14390275-14390339)
chr1 (162-226)||(26056182-26056246)
chr1 (184-252)||(28309870-28309938)
chr1 (162-218)||(50678383-50678439)
chr1 (162-198)||(52371847-52371883)
chr1 (162-217)||(9575066-9575121)
chr1 (167-220)||(9633797-9633850)
chr1 (185-226)||(36509851-36509892)
chr1 (162-219)||(51424268-51424325)
chr1 (162-218)||(9123442-9123498)
chr1 (162-194)||(31860525-31860557)
chr1 (167-219)||(42248347-42248399)
[»] chr7 (58 HSPs)
chr7 (162-256)||(29754691-29754785)
chr7 (162-256)||(43704625-43704719)
chr7 (162-256)||(33228864-33228958)
chr7 (168-257)||(6772859-6772948)
chr7 (167-256)||(47809591-47809680)
chr7 (167-256)||(8439897-8439986)
chr7 (167-252)||(35087858-35087943)
chr7 (167-256)||(37373664-37373753)
chr7 (162-255)||(40501461-40501554)
chr7 (162-256)||(6772745-6772839)
chr7 (162-256)||(8439783-8439877)
chr7 (162-256)||(43705547-43705641)
chr7 (167-256)||(32610815-32610904)
chr7 (167-252)||(33228982-33229067)
chr7 (167-256)||(33229429-33229518)
chr7 (167-256)||(47810035-47810124)
chr7 (168-256)||(8395443-8395531)
chr7 (168-256)||(33229538-33229626)
chr7 (162-257)||(32610701-32610796)
chr7 (162-253)||(47810147-47810238)
chr7 (167-240)||(37375115-37375188)
chr7 (167-247)||(40501378-40501458)
chr7 (162-256)||(10338318-10338412)
chr7 (162-256)||(35087967-35088061)
chr7 (167-256)||(35087402-35087491)
chr7 (167-252)||(37374658-37374743)
chr7 (167-246)||(29754582-29754661)
chr7 (162-256)||(10338204-10338298)
chr7 (168-241)||(47809513-47809586)
chr7 (184-256)||(3699692-3699764)
chr7 (162-241)||(19848854-19848933)
chr7 (162-252)||(1903847-1903937)
chr7 (162-247)||(37373551-37373635)
chr7 (152-241)||(45721786-45721875)
chr7 (162-234)||(4229113-4229185)
chr7 (162-226)||(36702794-36702858)
chr7 (162-251)||(6773403-6773489)
chr7 (162-241)||(18801232-18801311)
chr7 (162-253)||(21171312-21171403)
chr7 (162-253)||(21171494-21171585)
chr7 (162-252)||(1904029-1904119)
chr7 (167-205)||(3699803-3699841)
chr7 (162-202)||(37725896-37725936)
chr7 (185-256)||(6773326-6773397)
chr7 (162-228)||(19278370-19278436)
chr7 (162-219)||(7345931-7345988)
chr7 (187-236)||(33296245-33296294)
chr7 (162-202)||(43705483-43705523)
chr7 (162-197)||(1885305-1885340)
chr7 (162-241)||(28648307-28648386)
chr7 (162-197)||(40501250-40501285)
chr7 (162-204)||(18668780-18668822)
chr7 (162-204)||(18670560-18670602)
chr7 (162-219)||(1884257-1884314)
chr7 (178-219)||(17287107-17287148)
chr7 (162-219)||(38001521-38001578)
chr7 (168-196)||(43704723-43704751)
chr7 (170-226)||(46458748-46458804)
[»] chr4 (49 HSPs)
chr4 (162-257)||(15317719-15317814)
chr4 (162-256)||(26202391-26202485)
chr4 (171-256)||(34457474-34457559)
chr4 (168-256)||(32508970-32509058)
chr4 (162-256)||(23202967-23203061)
chr4 (167-256)||(23202370-23202459)
chr4 (167-252)||(28189306-28189391)
chr4 (167-253)||(23202858-23202944)
chr4 (168-249)||(23202263-23202344)
chr4 (167-256)||(26202282-26202371)
chr4 (167-256)||(28509769-28509858)
chr4 (167-258)||(41690046-41690137)
chr4 (167-256)||(28509878-28509967)
chr4 (167-256)||(41689942-41690031)
chr4 (168-256)||(32508449-32508536)
chr4 (168-252)||(34457577-34457661)
chr4 (167-256)||(15317833-15317921)
chr4 (167-251)||(36645317-36645400)
chr4 (167-258)||(54319724-54319815)
chr4 (167-256)||(32508556-32508645)
chr4 (167-256)||(36644871-36644959)
chr4 (172-228)||(56296220-56296276)
chr4 (162-217)||(3217653-3217708)
chr4 (162-241)||(8510872-8510951)
chr4 (162-253)||(26428673-26428763)
chr4 (168-219)||(28370485-28370536)
chr4 (167-218)||(28510354-28510405)
chr4 (167-253)||(36645430-36645516)
chr4 (162-219)||(306594-306651)
chr4 (162-219)||(8516894-8516951)
chr4 (168-253)||(39135518-39135603)
chr4 (162-219)||(46794857-46794914)
chr4 (162-219)||(56297721-56297778)
chr4 (162-226)||(28103521-28103585)
chr4 (162-252)||(30441626-30441716)
chr4 (168-226)||(30683062-30683120)
chr4 (167-253)||(35051111-35051197)
chr4 (184-241)||(32508909-32508966)
chr4 (162-217)||(936233-936288)
chr4 (162-253)||(26428853-26428944)
chr4 (162-241)||(28370661-28370740)
chr4 (162-253)||(53177026-53177117)
chr4 (162-219)||(2310824-2310881)
chr4 (162-219)||(30672106-30672163)
chr4 (162-219)||(30682737-30682794)
chr4 (162-219)||(31711109-31711166)
chr4 (167-252)||(36644758-36644843)
chr4 (185-241)||(8516843-8516899)
chr4 (162-226)||(33377399-33377463)
[»] chr6 (20 HSPs)
chr6 (162-256)||(12203276-12203370)
chr6 (162-256)||(17916474-17916568)
chr6 (162-256)||(21749807-21749901)
chr6 (162-256)||(5999588-5999682)
chr6 (167-256)||(17916365-17916454)
chr6 (168-256)||(21749699-21749787)
chr6 (162-256)||(8224343-8224437)
chr6 (162-256)||(12202297-12202391)
chr6 (167-253)||(12203167-12203253)
chr6 (167-252)||(17915731-17915816)
chr6 (162-256)||(21749219-21749313)
chr6 (167-256)||(17915840-17915929)
chr6 (162-241)||(12202214-12202293)
chr6 (162-233)||(33328392-33328463)
chr6 (162-226)||(27440210-27440274)
chr6 (167-205)||(11104433-11104471)
chr6 (162-197)||(19655042-19655077)
chr6 (162-219)||(19367734-19367791)
chr6 (162-219)||(28225441-28225498)
chr6 (162-226)||(27438807-27438871)
[»] chr5 (45 HSPs)
chr5 (162-256)||(6914817-6914911)
chr5 (162-256)||(32780087-32780181)
chr5 (162-256)||(1982729-1982823)
chr5 (162-256)||(2472435-2472529)
chr5 (167-256)||(37371188-37371277)
chr5 (168-256)||(5820688-5820776)
chr5 (162-253)||(37371074-37371165)
chr5 (162-256)||(12938636-12938730)
chr5 (162-256)||(12952739-12952833)
chr5 (167-256)||(5820579-5820668)
chr5 (167-256)||(37380304-37380393)
chr5 (162-246)||(2472347-2472431)
chr5 (168-256)||(12938528-12938616)
chr5 (168-256)||(37380195-37380283)
chr5 (162-256)||(16802218-16802312)
chr5 (167-226)||(38471311-38471370)
chr5 (162-256)||(1982843-1982937)
chr5 (162-256)||(21306608-21306702)
chr5 (162-256)||(21314446-21314540)
chr5 (162-226)||(12937917-12937981)
chr5 (162-253)||(19050766-19050857)
chr5 (162-241)||(38477153-38477232)
chr5 (162-252)||(3076993-3077083)
chr5 (167-253)||(15154075-15154161)
chr5 (162-252)||(19050949-19051038)
chr5 (162-219)||(12952075-12952132)
chr5 (152-253)||(21306725-21306826)
chr5 (152-253)||(21314563-21314664)
chr5 (162-226)||(10085880-10085944)
chr5 (162-254)||(12937806-12937898)
chr5 (168-205)||(12952677-12952714)
chr5 (162-203)||(16802347-16802388)
chr5 (162-226)||(15614995-15615059)
chr5 (162-226)||(21387654-21387718)
chr5 (162-241)||(38394723-38394802)
chr5 (167-253)||(641888-641974)
chr5 (162-208)||(8705872-8705918)
chr5 (162-219)||(15153894-15153951)
chr5 (162-202)||(6914732-6914772)
chr5 (162-226)||(7345425-7345489)
chr5 (162-226)||(18693715-18693779)
chr5 (162-253)||(641707-641798)
chr5 (214-256)||(6914755-6914797)
chr5 (162-204)||(32411981-32412023)
chr5 (168-228)||(42979471-42979531)
[»] chr3 (53 HSPs)
chr3 (162-256)||(30431392-30431486)
chr3 (162-256)||(51214171-51214265)
chr3 (167-256)||(30432617-30432706)
chr3 (162-256)||(23886133-23886227)
chr3 (162-256)||(44384301-44384395)
chr3 (167-256)||(30431977-30432066)
chr3 (168-256)||(12106404-12106492)
chr3 (168-256)||(23886248-23886336)
chr3 (168-256)||(51214063-51214151)
chr3 (167-253)||(5810018-5810104)
chr3 (162-256)||(7575483-7575577)
chr3 (162-256)||(7583727-7583821)
chr3 (167-253)||(7583844-7583930)
chr3 (162-256)||(12105376-12105470)
chr3 (162-256)||(23886831-23886925)
chr3 (162-256)||(46987342-46987436)
chr3 (162-256)||(46988474-46988568)
chr3 (167-252)||(30431507-30431592)
chr3 (168-252)||(54109631-54109715)
chr3 (162-256)||(12106512-12106606)
chr3 (162-252)||(13041964-13042054)
chr3 (162-252)||(13050041-13050131)
chr3 (168-250)||(46987461-46987543)
chr3 (167-256)||(19283866-19283955)
chr3 (168-256)||(30432086-30432174)
chr3 (167-257)||(13997280-13997370)
chr3 (162-252)||(51213468-51213558)
chr3 (162-256)||(54109513-54109607)
chr3 (162-250)||(19283751-19283839)
chr3 (162-256)||(51213582-51213676)
chr3 (167-256)||(13997389-13997478)
chr3 (162-252)||(30838477-30838569)
chr3 (162-253)||(23886717-23886808)
chr3 (162-256)||(12105490-12105584)
chr3 (162-228)||(54653999-54654065)
chr3 (162-247)||(46988361-46988446)
chr3 (162-226)||(51825656-51825720)
chr3 (167-253)||(30838364-30838450)
chr3 (162-208)||(42570029-42570075)
chr3 (162-219)||(2225066-2225123)
chr3 (162-219)||(11220700-11220757)
chr3 (162-218)||(7820407-7820463)
chr3 (162-241)||(2224889-2224968)
chr3 (185-256)||(7575392-7575463)
chr3 (162-241)||(26798926-26799005)
chr3 (162-219)||(19579336-19579393)
chr3 (162-219)||(47855380-47855437)
chr3 (162-219)||(55443592-55443649)
chr3 (162-226)||(8371237-8371301)
chr3 (162-226)||(8372651-8372715)
chr3 (162-226)||(10987688-10987752)
chr3 (167-219)||(11219452-11219504)
chr3 (162-226)||(41386147-41386211)
[»] chr2 (46 HSPs)
chr2 (162-256)||(5435176-5435270)
chr2 (167-256)||(27262735-27262824)
chr2 (162-253)||(43015556-43015647)
chr2 (162-252)||(27264582-27264672)
chr2 (162-256)||(17859271-17859365)
chr2 (162-256)||(42772455-42772549)
chr2 (167-256)||(27262844-27262933)
chr2 (162-253)||(27990391-27990482)
chr2 (162-253)||(28076924-28077015)
chr2 (162-256)||(15816671-15816765)
chr2 (162-256)||(17858589-17858683)
chr2 (162-256)||(43019251-43019345)
chr2 (162-241)||(15808097-15808176)
chr2 (162-252)||(17179260-17179350)
chr2 (168-256)||(17858481-17858569)
chr2 (162-257)||(14482095-14482190)
chr2 (162-241)||(20948419-20948498)
chr2 (162-253)||(17179077-17179168)
chr2 (162-252)||(30202892-30202982)
chr2 (162-256)||(11391961-11392055)
chr2 (162-226)||(6706943-6707007)
chr2 (162-226)||(7038367-7038431)
chr2 (162-254)||(21545076-21545168)
chr2 (162-241)||(22653047-22653126)
chr2 (162-253)||(30202710-30202801)
chr2 (168-226)||(11391895-11391953)
chr2 (168-226)||(11408556-11408614)
chr2 (162-256)||(11408622-11408716)
chr2 (162-252)||(42368317-42368407)
chr2 (162-219)||(5564076-5564133)
chr2 (162-219)||(5565187-5565244)
chr2 (162-226)||(12854139-12854203)
chr2 (170-254)||(21541086-21541170)
chr2 (167-219)||(22900216-22900268)
chr2 (152-219)||(3255920-3255987)
chr2 (167-226)||(7036988-7037047)
chr2 (168-219)||(17859215-17859266)
chr2 (168-239)||(22900974-22901045)
chr2 (167-228)||(6209097-6209158)
chr2 (168-217)||(22900166-22900215)
chr2 (162-226)||(12852903-12852967)
chr2 (169-205)||(14481953-14481989)
chr2 (162-226)||(23178917-23178981)
chr2 (162-226)||(23590174-23590238)
chr2 (168-204)||(27657804-27657840)
chr2 (162-230)||(41795983-41796051)
[»] chr8 (44 HSPs)
chr8 (167-256)||(30865130-30865219)
chr8 (168-256)||(40102854-40102942)
chr8 (162-256)||(3271177-3271271)
chr8 (162-256)||(15989275-15989369)
chr8 (162-256)||(21551939-21552033)
chr8 (162-256)||(21552985-21553079)
chr8 (167-256)||(4675883-4675972)
chr8 (162-256)||(3272030-3272124)
chr8 (162-256)||(3612588-3612682)
chr8 (162-256)||(15989161-15989255)
chr8 (162-256)||(30864460-30864554)
chr8 (167-252)||(3612486-3612571)
chr8 (168-256)||(30865022-30865110)
chr8 (168-255)||(21553605-21553692)
chr8 (162-256)||(4675769-4675863)
chr8 (162-256)||(15989021-15989115)
chr8 (162-256)||(29441633-29441727)
chr8 (167-256)||(21552054-21552143)
chr8 (167-256)||(21553100-21553189)
chr8 (167-256)||(21553713-21553802)
chr8 (162-256)||(3271915-3272009)
chr8 (162-256)||(40102350-40102444)
chr8 (168-256)||(3271291-3271379)
chr8 (162-234)||(40102965-40103037)
chr8 (162-252)||(41178679-41178769)
chr8 (162-250)||(8502285-8502373)
chr8 (168-252)||(14433645-14433729)
chr8 (162-205)||(39349495-39349538)
chr8 (162-256)||(40102238-40102331)
chr8 (168-241)||(14433832-14433905)
chr8 (168-252)||(8502106-8502190)
chr8 (162-219)||(24706254-24706311)
chr8 (162-226)||(3237435-3237498)
chr8 (162-226)||(19913509-19913573)
chr8 (162-226)||(41866911-41866975)
chr8 (179-226)||(13367085-13367132)
chr8 (162-241)||(24068347-24068426)
chr8 (162-204)||(7561816-7561858)
chr8 (171-241)||(33510219-33510289)
chr8 (178-219)||(39245-39286)
chr8 (162-199)||(4881162-4881199)
chr8 (180-241)||(36022460-36022521)
chr8 (162-206)||(3237695-3237739)
chr8 (162-226)||(38591042-38591106)
[»] scaffold0081 (2 HSPs)
scaffold0081 (167-256)||(1876-1965)
scaffold0081 (167-253)||(1988-2074)
[»] scaffold0007 (3 HSPs)
scaffold0007 (167-256)||(28154-28243)
scaffold0007 (167-256)||(28775-28864)
scaffold0007 (167-256)||(28263-28352)
[»] scaffold0630 (2 HSPs)
scaffold0630 (167-219)||(3094-3146)
scaffold0630 (167-219)||(2032-2084)
[»] scaffold0003 (2 HSPs)
scaffold0003 (162-226)||(47087-47151)
scaffold0003 (162-226)||(48491-48555)
[»] scaffold0839 (2 HSPs)
scaffold0839 (162-256)||(130-224)
scaffold0839 (162-235)||(42-115)
[»] scaffold0064 (2 HSPs)
scaffold0064 (168-241)||(20414-20487)
scaffold0064 (169-242)||(20601-20674)
[»] scaffold0649 (1 HSPs)
scaffold0649 (185-241)||(3931-3987)
[»] scaffold0038 (1 HSPs)
scaffold0038 (162-219)||(25939-25996)
[»] scaffold0178 (1 HSPs)
scaffold0178 (162-226)||(2300-2364)


Alignment Details
Target: chr1 (Bit Score: 109; Significance: 7e-55; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 19 - 148
Target Start/End: Complemental strand, 12505003 - 12504878
Alignment:
Q  19 catgtgagatatgaaactcgatattttgatagctaggttaaatggtttggttatgactaatgggtatagctgttttctttataaagagtggtagtagtag 118  Q
    |||| |||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12505003 catgggagatatgaaactcgatattttgatag----gttaaatggtttggttatgactaatgggtatagctgttttctttataaagagtggtagtagtag 12504908  T
Q  119 aactcatgatatgtgttttattaaaattta 148  Q
    ||||||||||||||||||||||||||||||    
T  12504907 aactcatgatatgtgttttattaaaattta 12504878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 51760056 - 51760150
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| |||||||||||||||||||||||||||||    
T  51760056 cttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttacctccgtttatctaagtggtccctt 51760150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 20171256 - 20171167
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||| |||||||||||||||||||||||||| | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  20171256 cttatttttgaattttattttggtcccttaactttaaactgtctcaatttggtcccataactttacctccgtttacctaagtggtccctt 20171167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 20170780 - 20170694
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    |||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||| |||| ||||||||| |||||||||||    
T  20170780 cttatttttgaatttcattttgatcccttaactttaaaccgtcttaatttggttccataactttatctccgtttacctaagtggtcc 20170694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 37694675 - 37694765
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctta 257  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||| | |||||| ||||| |||||||| |||||||||||||||    
T  37694675 cttatttttaaatttcattttggtcccttaactttaaactgtttcaatttgatcccataactttacttccgtttacctaagtggtccctta 37694765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 47511384 - 47511478
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||| |||||||| |||||||||| | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  47511384 cttaacttatttttgaatttcattttgatcccttaattttaaactgtctcaatttggtcccataactttacctccgtttacctaagtggtccctt 47511478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 47512183 - 47512089
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||  ||||| |||||||| ||||| ||||||||||||||    
T  47512183 cttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtctcataactttacctctgtttacctaagtggtccctt 47512089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 51760766 - 51760677
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| |||||| ||||||| ||||||||||||||    
T  51760766 cttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttaccaccgtttacctaagtggtccctt 51760677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 168 - 257
Target Start/End: Original strand, 52371756 - 52371845
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctta 257  Q
    |||||||||||||||||||||||||||||||||||||| || | ||||| || |||||| |||||||||||||| |||||||||||||||    
T  52371756 ttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttagtcccataactttacctccgtttacctaagtggtccctta 52371845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 256
Target Start/End: Original strand, 25866569 - 25866657
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||| |||||| |||||||||||||||||||||||||| | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  25866569 ttattttcgaattttattttggtcccttaactttaaactgtctcaatttggtcccataactttacctccgtttacctaagtggtccctt 25866657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 25866771 - 25866677
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| |||||||| |||||  |||||||||||||    
T  25866771 cttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttacctctgtttacttaagtggtccctt 25866677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 52371000 - 52371094
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| ||| |||||||||| |||||| |||||||    
T  52371000 cttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttgcctccgtttacctaagtagtccctt 52371094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 168 - 253
Target Start/End: Original strand, 20170583 - 20170668
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    |||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| |||||||||||||| |||| ||||||    
T  20170583 ttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttacctccgtttacctaattggtcc 20170668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 27114903 - 27114814
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||||||||||||||||||||||||||| || | ||||||||  ||||| ||||||||| |||| ||||||||||||||    
T  27114903 cttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtctcataactttacctccatttacctaagtggtccctt 27114814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 32824030 - 32824119
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||||||||||||||||| |||||||||||||||| || | |||||||| |||||| |||||||| ||||| ||||||||||||||    
T  32824030 cttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataactttacctctgtttacctaagtggtccctt 32824119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 47511587 - 47511498
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||||||||||||||||||||||||||| || | |||||||| | |||  |||||||||||||| ||||||||||||||    
T  47511587 cttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcctatagctttacctccgtttacctaagtggtccctt 47511498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 51760568 - 51760657
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||||||||||||||||| |||||||||||||||| || | |||||||| |||||| |||| ||||||||| ||||||||||||||    
T  51760568 cttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataactttatctccgtttacctaagtggtccctt 51760657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 168 - 256
Target Start/End: Complemental strand, 25866173 - 25866085
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||||||||| |||||||||||||||| || | |||||||| ||||||||||  ||||||||| ||||||||||||||    
T  25866173 ttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataattttgtctccgtttacctaagtggtccctt 25866085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 25865971 - 25866062
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||| || ||| ||||| | |||||| |||||||||||    
T  25865971 cttaacttatttttgaatttcattttggtcccttaactttaaaccgtttcaatttggtcccgtaactttacattcgtttacctaagtggtcc 25866062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 27114705 - 27114795
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctta 257  Q
    ||||||||||||||| ||||||||||||||| ||||||  || | |||||||| |||||| |||||||||||||| |||||||||||||||    
T  27114705 cttatttttgaattttattttggtcccttaattttaaatcgtctcaatttggtcccataactttacctccgtttacctaagtggtccctta 27114795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 32824228 - 32824139
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||||||||||||||||||||||||||| || | ||||||||  ||||| |||| ||||||||| |||| |||||||||    
T  32824228 cttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtctcataactttatctccgtttacctaaatggtccctt 32824139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 46280865 - 46280776
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||| ||||||||||||||| ||||||| || | |||||| | |||||| |||||||||||||| ||||||||||||||    
T  46280865 cttatttttgaattttattttggtcccttaattttaaaccgtctcaatttgatcccataactttacctccgtttacctaagtggtccctt 46280776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 32823475 - 32823559
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaa 246  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||| | |||||||| |||||| |||||||| ||||| ||||    
T  32823475 cttaacttatttttgaattttattttggtcccttaactttaaactgtctcaatttggtcccataactttacctctgtttacctaa 32823559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 162 - 249
Target Start/End: Original strand, 4388010 - 4388097
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtg 249  Q
    |||| |||||||||||||||||||||| |||||||||||||||| || | |||||||| |||||| ||| |||||||||| |||||||    
T  4388010 cttaacttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataactttgcctccgtttacctaagtg 4388097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 47511980 - 47512066
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    ||||||||||||||| |||||| |||||||||||||||| || | ||||||||  ||||| |||||||||||||| |||||||||||    
T  47511980 cttatttttgaattttattttgatcccttaactttaaaccgtctcaatttggtctcataactttacctccgtttacctaagtggtcc 47512066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 51760259 - 51760173
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    ||||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| | |||||| ||||| ||||| |||||    
T  51760259 cttatttttgaatttcattttggtcccttaactttaaaccgtatcaatttggtcccataactatacctctgtttacctaagcggtcc 51760173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 20171058 - 20171147
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||| |||||||||||| |||||||||||||||| || | |||||||| |||||| |||||||| |||||  |||||||||||||    
T  20171058 cttattttttaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataactttacctctgtttacttaagtggtccctt 20171147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 256
Target Start/End: Complemental strand, 39195099 - 39195011
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||| ||||||||||||||||||||||||||||| || | |||||| |  ||||| |||||||| ||||| ||||||||||||||    
T  39195099 ttattttttaatttcattttggtcccttaactttaaaccgtctcaatttgatctcataactttacctctgtttacctaagtggtccctt 39195011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 39193598 - 39193677
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||| | |||||| | |||||| ||||||||||||||    
T  39193598 cttaacttattttttaattttattttggtcccttaactttaaactgtctcaatttgatcccataactttacctccgttta 39193677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 28309779 - 28309869
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| || | ||||||||  ||||| ||| ||| |||||| ||||||||||    
T  28309779 cttaacttattttttaatttcattttggtcccttaactttaaaccgtctcaatttggtctcataactttgccttcgtttacctaagtggtc 28309869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 52371208 - 52371114
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||| |||||||||||||||| || | |||||||| || ||| ||| ||| |||||| | ||||||||||||    
T  52371208 cttaacttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccgtaactttgcctgcgtttacccaagtggtccctt 52371114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 32823635 - 32823568
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacct 234  Q
    ||||||||||||||| ||||||||||| |||||||||||||| | |||||||| |||||| |||||||    
T  32823635 cttatttttgaattttattttggtcccctaactttaaactgtctcaatttggtcccataactttacct 32823568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 27115551 - 27115505
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgt 208  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  27115551 cttaacttatttttgaatttcattttggtcccttaactttaaactgt 27115505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 28999857 - 28999905
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttt 210  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||    
T  28999857 cttaacttatttttgaatttcattttggtcccttaactttaaaatgttt 28999905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 26054919 - 26054978
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||||||||| |||||||||||||||| ||||| |||| ||||| |||||||||||||||    
T  26054919 cttatttttggatttcattttggtcccctaactataaagtgtttcaatttggttccataa 26054978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 43190597 - 43190506
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    |||| ||||||||||||||| | ||||||||| |||||||||||||||| |||||||| |  ||| | ||| |||||||||| || ||||||    
T  43190597 cttaacttatttttgaattttaatttggtcccctaactttaaactgtttcaatttggtcctgtaagtatacttccgtttatccaactggtcc 43190506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 3979412 - 3979346
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataatt 228  Q
    |||| |||||||||| |||||||||||||||||||||| |||| ||| | |||||||| ||||||||    
T  3979412 cttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataatt 3979346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 25035375 - 25035454
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    |||| ||||||||||||||||| ||||||||| |||||||||| ||| | |||||||| || ||| | ||| ||||||||    
T  25035375 cttaacttatttttgaatttcaatttggtcccctaactttaaattgtctcaatttggtcccctaagtatacttccgttta 25035454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 25040588 - 25040667
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    |||| ||||||||||||||||| ||||||||| |||||||||| ||| | |||||||| || ||| | ||| ||||||||    
T  25040588 cttaacttatttttgaatttcaatttggtcccctaactttaaattgtctcaatttggtcccctaagtatacttccgttta 25040667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 25432513 - 25432556
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaac 205  Q
    |||| |||||||||||||||||||||| ||||||||||||||||    
T  25432513 cttaacttatttttgaatttcattttgatcccttaactttaaac 25432556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 3978061 - 3978127
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataatt 228  Q
    |||| |||||||||||||||||||||||||| |||||| |||| ||| | |||||| | ||||||||    
T  3978061 cttaacttatttttgaatttcattttggtcctttaactataaagtgtctcaatttgatcccataatt 3978127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 43189581 - 43189651
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgt 238  Q
    |||||||||||||| | |||| |||| |||||||||||||||| |||||||| || ||| | |||||||||    
T  43189581 ttatttttgaattttaatttgatcccctaactttaaactgtttcaatttggtcccctaagtatacctccgt 43189651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 9575330 - 9575250
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttat 242  Q
    |||| |||||||||||||| || ||||||||  |||||||||| ||| | |||||||| || ||| | |||||||||||||    
T  9575330 cttaacttatttttgaattccaatttggtcctctaactttaaattgtctcaatttggtcccctaagtatacctccgtttat 9575250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 14390275 - 14390339
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| ||||||||| ||||||||||||||||  ||||| |||| ||| | |||||||||||||||    
T  14390275 cttaacttattttttaatttcattttggtcctctaactataaaatgtctcaatttggttccataa 14390339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 26056246 - 26056182
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| |||||||||| |||||||||||||||| ||||| |||| ||| | |||||||| ||||||    
T  26056246 cttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataa 26056182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 252
Target Start/End: Complemental strand, 28309938 - 28309870
Alignment:
Q  184 ttttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    |||||||||||||||||||||| || | ||||||||  ||||| ||| ||| |||||| ||||||||||    
T  28309938 ttttggtcccttaactttaaaccgtctcaatttggtctcataactttgccttcgtttacctaagtggtc 28309870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 50678383 - 50678439
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttgg 218  Q
    |||| |||||||||||||||||||||| |||||||||| |||| ||| | |||||||    
T  50678383 cttaacttatttttgaatttcattttgatcccttaactataaaatgtctcaatttgg 50678439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 198
Target Start/End: Complemental strand, 52371883 - 52371847
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaac 198  Q
    |||| ||||||||||||||||||||||||||||||||    
T  52371883 cttaacttatttttgaatttcattttggtcccttaac 52371847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 9575066 - 9575121
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttg 217  Q
    |||| ||||||||| ||||| | ||||||||| |||||||||||||| ||||||||    
T  9575066 cttaacttatttttaaatttaaatttggtcccctaactttaaactgtcttaatttg 9575121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 9633797 - 9633850
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggtt 220  Q
    ||||||||||  ||||||||||||||||||||| |||| ||| | |||||||||    
T  9633797 cttatttttggttttcattttggtcccttaactataaagtgtctcaatttggtt 9633850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 36509851 - 36509892
Alignment:
Q  185 tttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    ||||||||||||||| |||| ||||| |||||||||||||||    
T  36509851 tttggtcccttaactataaagtgtttcaatttggttccataa 36509892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 51424268 - 51424325
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| |||||||||| |||||||||||||||||||| | |||| ||| | ||||||||    
T  51424268 cttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggt 51424325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 9123498 - 9123442
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttgg 218  Q
    |||| |||||||| | |||| ||||||||||||||||| |||| ||||| |||||||    
T  9123498 cttaacttattttcggattttattttggtcccttaactataaagtgtttcaatttgg 9123442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 31860557 - 31860525
Alignment:
Q  162 cttatcttatttttgaatttcattttggtccct 194  Q
    |||| ||||||||||||||||||||||||||||    
T  31860557 cttaacttatttttgaatttcattttggtccct 31860525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 42248399 - 42248347
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||||||||| |||||||||||||||| ||||| |||| ||| | ||||||||    
T  42248399 cttatttttggatttcattttggtcccataactataaagtgtctcaatttggt 42248347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 6e-37; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 29754785 - 29754691
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||    
T  29754785 cttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggttccataattttacctccgtttacctaagtggtccctt 29754691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 43704625 - 43704719
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || | |||||||| ||||||||||||||||||||| ||||||||||||||    
T  43704625 cttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataattttacctccgtttacctaagtggtccctt 43704719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 33228864 - 33228958
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||||||||| |||||||| | | |||||||| ||||||||||||||||||||| ||||||||||||||    
T  33228864 cttaacttatttttgaatttcattttggtcccttaattttaaactatctcaatttggtcccataattttacctccgtttacctaagtggtccctt 33228958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 168 - 257
Target Start/End: Complemental strand, 6772948 - 6772859
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctta 257  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||| ||| || |||||||||||||| |||||||||||||||    
T  6772948 ttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcccacaactttacctccgtttacctaagtggtccctta 6772859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 47809680 - 47809591
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||  ||||||||||||| ||||||||||||||    
T  47809680 cttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcccataacgttacctccgtttacctaagtggtccctt 47809591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 8439986 - 8439897
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||||||||||||||||||||||||||| || | ||||| || |||||| |||||||||||||| ||||||||||||||    
T  8439986 cttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttagtcccataactttacctccgtttacctaagtggtccctt 8439897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 35087858 - 35087943
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    ||||||||||||| ||||||||||||||||||||||||| || | |||||||| ||||||||||||||||||||| ||||||||||    
T  35087858 cttatttttgaatctcattttggtcccttaactttaaaccgtctcaatttggtcccataattttacctccgtttacctaagtggtc 35087943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 37373753 - 37373664
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||||||||||||||||||||||||||  || | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  37373753 cttatttttgaatttcattttggtcccttaactttaaatcgtctcaatttggtcccataactttacctccgtttacctaagtggtccctt 37373664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 162 - 255
Target Start/End: Complemental strand, 40501554 - 40501461
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccct 255  Q
    |||| ||||||||||||||||||||||||||||||| ||||||| || | |||||||| |||||| |||||||||||||| |||||||||||||    
T  40501554 cttaacttatttttgaatttcattttggtcccttaattttaaaccgtctcaatttggtcccataactttacctccgtttacctaagtggtccct 40501461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 6772745 - 6772839
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||| ||||||||||| |||||||||||| || | |||||||| |||||||||||||||||||||  |||||||||||||    
T  6772745 cttaacttatttttgaattccattttggtcctttaactttaaaccgtctcaatttggtcccataattttacctccgtttacttaagtggtccctt 6772839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 8439783 - 8439877
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||||||||| | |||||||| | |||||||| |||||| ||||| |||||||| ||||||||||||||    
T  8439783 cttaacttatttttgaatttcattttggtcccttaattgtaaactgtctcaatttggtcccataactttacatccgtttaactaagtggtccctt 8439877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 43705641 - 43705547
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||| |||||||||||||||| || | ||||||||||||||| ||| |||||||||| |||||| |||||||    
T  43705641 cttaacttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggttccataactttgcctccgtttacctaagtagtccctt 43705547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 32610904 - 32610815
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| ||| |||| ||||| ||||||||||||||    
T  32610904 cttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttgcctctgtttacctaagtggtccctt 32610815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 33229067 - 33228982
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    |||||||||||||||||||||||||| |||||||||||| || | |||||||| |||||| |||||||||||||| ||||||||||    
T  33229067 cttatttttgaatttcattttggtcctttaactttaaaccgtctcaatttggtcccataactttacctccgtttacctaagtggtc 33228982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 33229429 - 33229518
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||| |||||| |||||||||||||||| || | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  33229429 cttatttttgaattttattttgatcccttaactttaaaccgtctcaatttggtcccataactttacctccgtttacctaagtggtccctt 33229518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 47810035 - 47810124
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||| |||||| |||||||||||||||| || | |||||||| ||||||||||||||| ||||| ||||||||||||||    
T  47810035 cttatttttgaattttattttgatcccttaactttaaaccgtctcaatttggtcccataattttacctctgtttacctaagtggtccctt 47810124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 168 - 256
Target Start/End: Complemental strand, 8395531 - 8395443
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||||||||||||||||   ||||||||||||||  | | ||||||||||||||| |||||||||||||||||||||||||||||    
T  8395531 ttatttttgaatttcattttgaatccttaactttaaaccatctcaatttggttccataactttacctccgtttatctaagtggtccctt 8395443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 168 - 256
Target Start/End: Complemental strand, 33229626 - 33229538
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||||||||||||||||||||||||| |||||||| | | ||||||||||||||| ||||| || ||||| ||||||||||||||    
T  33229626 ttatttttgaatttcattttggtcccttaattttaaactatctcaatttggttccataactttacatctgtttacctaagtggtccctt 33229538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 162 - 257
Target Start/End: Original strand, 32610701 - 32610796
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctta 257  Q
    |||| |||||||||||||||||||||| |||||||||||||||| || | |||||||| |||||| ||| |||| ||||| |||||||||||||||    
T  32610701 cttaacttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataactttgcctctgtttacctaagtggtccctta 32610796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 47810238 - 47810147
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||| | |||||| | |||||| |||||||||||||| |||||| ||||    
T  47810238 cttaacttatttttgaattacattttggtcccttaactttaaactgtctcaatttgatcccataactttacctccgtttacctaagttgtcc 47810147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 37375188 - 37375115
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgttt 240  Q
    ||||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| |||||||||||||    
T  37375188 cttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttacctccgttt 37375115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 247
Target Start/End: Complemental strand, 40501458 - 40501378
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaag 247  Q
    ||||||||||||||||||||||||||||||| ||||||| || | |||||||| |||||| |||||||||||||| |||||    
T  40501458 cttatttttgaatttcattttggtcccttaattttaaaccgtctcaatttggtcccataactttacctccgtttacctaag 40501378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 10338412 - 10338318
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||||||||||||||||||||  | | |||||||| |||||| ||| ||||| |||| ||||||||| ||||    
T  10338412 cttaacttatttttgaatttcattttggtcccttaactttaaaccatctcaatttggtcccataactttgcctccatttacctaagtggttcctt 10338318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 35088061 - 35087967
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||| |||||||||  ||||||||||||||| | ||||| || ||| || |||||||||||||| ||||||||||||||    
T  35088061 cttaacttatttttgaattttattttggtcttttaactttaaactgtctcaattttgtcccaaaactttacctccgtttacctaagtggtccctt 35087967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 35087491 - 35087402
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||||||||||||||||| ||| |||||||||||| || | |||||||| |||||| ||||||| |||| | ||||||||||||||    
T  35087491 cttatttttgaatttcattttgatcctttaactttaaaccgtctcaatttggtcccataaatttaccttcgttcacctaagtggtccctt 35087402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 37374658 - 37374743
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    ||||||||||||||| |||||| |||||||||||||||| || | |||||||| |||||| ||||| |||||||| ||||||||||    
T  37374658 cttatttttgaattttattttgatcccttaactttaaaccgtctcaatttggtcccataactttacttccgtttacctaagtggtc 37374743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 246
Target Start/End: Original strand, 29754582 - 29754661
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaa 246  Q
    ||||||||||||||||||||||||||||||||||||||| || | |||||||| | |||| |||||||| ||||| ||||    
T  29754582 cttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcctataactttacctcagtttacctaa 29754661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 10338204 - 10338298
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||| ||||| |||||||||| || | ||||||||  ||||| ||| |||||||||| ||||| ||||||||    
T  10338204 cttaacttatttttgaatttcattttgatccctcaactttaaaccgtctcaatttggtctcataactttgcctccgtttacctaagcggtccctt 10338298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 47809513 - 47809586
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    ||||||||||||||||||||||| |||||||||||||| || | |||||||| |||||| ||| ||||||||||    
T  47809513 ttatttttgaatttcattttggttccttaactttaaaccgtctcaatttggtcccataactttgcctccgttta 47809586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 256
Target Start/End: Original strand, 3699692 - 3699764
Alignment:
Q  184 ttttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||||||||||  | | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  3699692 ttttggtcccttaactttaaaccatctcaatttggtcccataactttacctccgtttacctaagtggtccctt 3699764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 19848933 - 19848854
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    |||| |||||||||| |||||||||||||||||||||| |||| ||| | |||||||| |||||| | ||||||||||||    
T  19848933 cttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataaatatacctccgttta 19848854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 1903847 - 1903937
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    |||| |||||| |||||||||| ||||||||| |||||||||||||| | |||||||| || ||| | |||||||||||||| || |||||    
T  1903847 cttaacttattcttgaatttcaatttggtcccctaactttaaactgtctcaatttggtcccctaagtatacctccgtttatccaactggtc 1903937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 37373551 - 37373635
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaag 247  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||| | |||||| |  |||||  ||||||||||||| |||||    
T  37373551 cttaacttatttttgaatttcattttggtaccttaactttaaactgtctcaatttgatctcataa-cttacctccgtttacctaag 37373635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 241
Target Start/End: Complemental strand, 45721875 - 45721786
Alignment:
Q  152 tgctttgttgcttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    ||||||||| |||| |||||||||   ||||||||||||||| ||||| |||| ||| | ||||||||||||||| ||| ||||||||||    
T  45721875 tgctttgttccttaacttatttttagttttcattttggtcccctaactataaagtgtctcaatttggttccataagttttcctccgttta 45721786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 4229113 - 4229185
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacct 234  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| || | ||||||||  ||||| |||||||    
T  4229113 cttaacttattttttaatttcattttggtcccttaactttaaaccgtctcaatttggtctcataactttacct 4229185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 36702794 - 36702858
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| |||||||||  ||||||||||||||||||||||||||||||| | |||||||| ||||||    
T  36702794 cttaacttatttttagatttcattttggtcccttaactttaaactgtctcaatttggtcccataa 36702858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 251
Target Start/End: Complemental strand, 6773489 - 6773403
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggt 251  Q
    |||| ||||||||||||||||||||||||||   |||||||||| || | |||||||| |||||| ||| ||||||||||  ||||||||    
T  6773489 cttaacttatttttgaatttcattttggtcc---aactttaaaccgtctcaatttggtcccataactttgcctccgtttacttaagtggt 6773403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 18801232 - 18801311
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    |||| ||||||||||||||||||||||||||| ||||| |||| ||| | |||||||| |||||| | |||||| |||||    
T  18801232 cttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggtcccataaatatacctctgttta 18801311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 21171312 - 21171403
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    |||| ||||||||||||||||| ||||||||| |||||||||| ||| | |||||||| || ||| | |||||| ||||||| || ||||||    
T  21171312 cttaacttatttttgaatttcaatttggtcccctaactttaaattgtctcaatttggtcccctaagtatacctcagtttatccaactggtcc 21171403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 21171585 - 21171494
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    |||| |||||||||| |||||| ||||||||| |||||||||| ||| | |||||||| || ||| | |||||||||||| | |||||||||    
T  21171585 cttaacttatttttggatttcaatttggtcccctaactttaaattgtctcaatttggtcccctaagtatacctccgtttacccaagtggtcc 21171494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 1904119 - 1904029
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    |||| |||||||||| |||||| ||||||| | |||||||||||||| | |||||||| || ||| ||||| |||||||| | ||||||||    
T  1904119 cttaacttatttttggatttcaatttggtctcctaactttaaactgtctcaatttggtcccctaagtttacttccgtttacccaagtggtc 1904029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 3699841 - 3699803
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaac 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3699841 cttatttttgaatttcattttggtcccttaactttaaac 3699803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 37725896 - 37725936
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaacttta 202  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  37725896 cttaacttatttttgaatttcattttggtcccttaacttta 37725936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 256
Target Start/End: Original strand, 6773326 - 6773397
Alignment:
Q  185 tttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||| || | |||||||| |||||| ||| ||||||||||  |||||||||||||    
T  6773326 tttgatcccttaactttaaaccgtctcaatttggtcccataactttgcctccgtttacttaagtggtccctt 6773397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 19278370 - 19278436
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataatt 228  Q
    |||| |||||||||| |||||||||||||||||||| | |||| ||| | |||||||| ||||||||    
T  19278370 cttaacttatttttggatttcattttggtcccttaattataaagtgtctcaatttggtcccataatt 19278436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 7345931 - 7345988
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| |||||||||| |||||||||||||||| ||| | |||||||| ||||||||||    
T  7345931 cttaacttatttttggatttcattttggtcccataaatataaactgtcttaatttggt 7345988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 33296294 - 33296245
Alignment:
Q  187 tggtcccttaactttaaactgttttaatttggttccataattttacctcc 236  Q
    ||||||||||||||||||| || | ||||||||||||||| |||||||||    
T  33296294 tggtcccttaactttaaaccgtctcaatttggttccataactttacctcc 33296245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 43705483 - 43705523
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaacttta 202  Q
    |||| |||||||||||||||||||||| |||||||||||||    
T  43705483 cttaacttatttttgaatttcattttgatcccttaacttta 43705523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 197
Target Start/End: Complemental strand, 1885340 - 1885305
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaa 197  Q
    |||| |||||||||||||||||||||||||||||||    
T  1885340 cttaacttatttttgaatttcattttggtcccttaa 1885305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 28648307 - 28648386
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    |||| |||| ||||| |||||| |||| |||| |||||||||||||| ||||||||||  ||||| | |||||| |||||    
T  28648307 cttaacttaattttggatttcaatttgatcccctaactttaaactgtcttaatttggtctcataagtatacctctgttta 28648386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 197
Target Start/End: Original strand, 40501250 - 40501285
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaa 197  Q
    |||| |||||||||||||||||||||||||||||||    
T  40501250 cttaacttatttttgaatttcattttggtcccttaa 40501285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 18668780 - 18668822
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaa 204  Q
    |||| |||||||||||||||||||||||||||  |||||||||    
T  18668780 cttaacttatttttgaatttcattttggtccccaaactttaaa 18668822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Complemental strand, 18670602 - 18670560
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaa 204  Q
    |||| |||||||||| |||| ||||||||||||||||||||||    
T  18670602 cttaacttatttttggattttattttggtcccttaactttaaa 18670560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 1884257 - 1884314
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| ||||||||||||||| ||||||||||||||| | |||| ||| | ||||||||    
T  1884257 cttaacttatttttgaattttattttggtcccttaattataaaatgtctcaatttggt 1884314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 17287107 - 17287148
Alignment:
Q  178 atttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||||| ||||||||| |||||||||||||||| ||||||||    
T  17287107 atttcaatttggtcccctaactttaaactgtttcaatttggt 17287148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 38001521 - 38001578
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| |||||||| |||||||||||||||||  ||||| |||| ||||| ||||||||    
T  38001521 cttaacttattttcgaatttcattttggtcctctaactataaagtgtttcaatttggt 38001578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 196
Target Start/End: Complemental strand, 43704751 - 43704723
Alignment:
Q  168 ttatttttgaatttcattttggtccctta 196  Q
    |||||||||||||||||||||||||||||    
T  43704751 ttatttttgaatttcattttggtccctta 43704723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 226
Target Start/End: Complemental strand, 46458804 - 46458748
Alignment:
Q  170 atttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||||||| ||||| ||||||||||||||| |||| ||| | |||||||| ||||||    
T  46458804 atttttgattttcaatttggtcccttaactataaagtgtctcaatttggtcccataa 46458748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 8e-33; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 162 - 257
Target Start/End: Original strand, 15317719 - 15317814
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctta 257  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||| |||||||||||||| |||||||||||||||    
T  15317719 cttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttgtttccataactttacctccgtttacctaagtggtccctta 15317814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 26202485 - 26202391
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  26202485 cttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcccataactttacctccgtttacctaagtggtccctt 26202391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 171 - 256
Target Start/End: Original strand, 34457474 - 34457559
Alignment:
Q  171 tttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||    
T  34457474 tttttgaatttcattttggtcctttaactttaaactgtcttaatttggtcccataactttacctccgtttatctaagtggtccctt 34457559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 256
Target Start/End: Complemental strand, 32509058 - 32508970
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||||||||||||||||||||||||||||||||| || | |||||| | |||||| |||||||||||||||||||||||||||||    
T  32509058 ttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttgatcccataactttacctccgtttatctaagtggtccctt 32508970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 23203061 - 23202967
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| |||||||||||||| |||||| |||||||    
T  23203061 cttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttacctccgtttacctaagtcgtccctt 23202967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 23202459 - 23202370
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||||||||||||||||||||||||||| || | | |||||| |||||| |||||||||||||| ||||||||||||||    
T  23202459 cttatttttgaatttcattttggtcccttaactttaaaccgtctcagtttggtcccataactttacctccgtttacctaagtggtccctt 23202370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 28189391 - 28189306
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    ||||||||||||||||||||||||||||||||||||||  |||| |||||||| |||||||||||||||| |||| ||||||||||    
T  28189391 cttatttttgaatttcattttggtcccttaactttaaatcgtttcaatttggtcccataattttacctccatttacctaagtggtc 28189306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 23202858 - 23202944
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    |||||||||||||||||||||| |||||||||||||||| || | |||||||| |||||| |||||||||||||| |||||||||||    
T  23202858 cttatttttgaatttcattttgatcccttaactttaaaccgtctaaatttggtcccataactttacctccgtttacctaagtggtcc 23202944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 23202263 - 23202344
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtg 249  Q
    |||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| |||||||||||||| |||||||    
T  23202263 ttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttacctccgtttacctaagtg 23202344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 26202282 - 26202371
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||| ||||||||||||||||||||||| || | |||||  | ||||||||||||||||||||| ||||||||||||||    
T  26202282 cttatttttgaattttattttggtcccttaactttaaaccgtctcaatttaatcccataattttacctccgtttacctaagtggtccctt 26202371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 28509769 - 28509858
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||| ||||||||||||||||||||||||||||| || | |||| ||| |||||| |||||||||||||| ||||||||||||||    
T  28509769 cttatttttaaatttcattttggtcccttaactttaaaccgtctcaattcggtcccataactttacctccgtttacctaagtggtccctt 28509858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 167 - 258
Target Start/End: Complemental strand, 41690137 - 41690046
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcccttaa 258  Q
    ||||||||||||||| ||||||||||||||||||||||| || | |||||||| |||||| |||||||  ||||| ||||||||||||||||    
T  41690137 cttatttttgaattttattttggtcccttaactttaaaccgtctcaatttggtcccataactttacctatgtttacctaagtggtcccttaa 41690046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 28509967 - 28509878
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||||||||||||||||| |||||||||||||||| || | |||||||| |||||| ||||||| | |||| ||||||||||||||    
T  28509967 cttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataactttaccttcatttacctaagtggtccctt 28509878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 41689942 - 41690031
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||| ||||| ||||||||||||||||||||||| || | |||||||| | |||| ||||||| |||||||||||||||||||||    
T  41689942 cttattttttaattttattttggtcccttaactttaaaccgtctcaatttggtccgataactttacctacgtttatctaagtggtccctt 41690031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 256
Target Start/End: Original strand, 32508449 - 32508536
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||||||||| |||||||||||||||||||||||||| | |||||| | |||||| |||||||||||||| || |||||||||||    
T  32508449 ttatttttgaattt-attttggtcccttaactttaaactgtctcaatttgatcccataactttacctccgtttaccttagtggtccctt 32508536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 252
Target Start/End: Complemental strand, 34457661 - 34457577
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    |||||||||||||| ||||||||||||||||||||| || | | |||||||| |||||| |||||||||||||| ||||||||||    
T  34457661 ttatttttgaattttattttggtcccttaactttaatctatctcaatttggtcccataactttacctccgtttacctaagtggtc 34457577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 15317921 - 15317833
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||||||||| |||||||||||||||||||||||| || | |||||||| | |||| |||||||| ||||| ||||||||||||||    
T  15317921 cttatttttgaatt-cattttggtcccttaactttaaaccgtctcaatttggtccgataactttacctctgtttacctaagtggtccctt 15317833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 251
Target Start/End: Original strand, 36645317 - 36645400
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggt 251  Q
    ||||||||||||||||||||||||||||||||||||||| || | |||||||  |||||| |||||||| | |||||||||||||    
T  36645317 cttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggccccataactttacctctg-ttatctaagtggt 36645400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 258
Target Start/End: Complemental strand, 54319815 - 54319724
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcccttaa 258  Q
    |||||||||||||||||||||| ||| |||| ||||||| || | ||||||||  ||||| |||||||||||||| ||||||||||| ||||    
T  54319815 cttatttttgaatttcattttgatcctttaattttaaaccgtctcaatttggtctcataactttacctccgtttacctaagtggtcctttaa 54319724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 32508645 - 32508556
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||||||||||||||||| | |||||||||||||  || | |||||||| |||||| ||||||||  |||| ||||||||||||||    
T  32508645 cttatttttgaatttcattttgattccttaactttaaatcgtctcaatttggtcccataactttacctcaatttacctaagtggtccctt 32508556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 36644959 - 36644871
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||||||||||||||||| || ||||||||||||| || | || ||||| |||||| |||||||| | ||||||||||||| ||||    
T  36644959 cttatttttgaatttcattttgatctcttaactttaaaccgtctcaagttggtcccataactttacctctg-ttatctaagtggttcctt 36644871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 56296220 - 56296276
Alignment:
Q  172 ttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataatt 228  Q
    |||||||||||||||| | |||||||||||||||||| |||||||||| ||||||||    
T  56296220 ttttgaatttcattttagccccttaactttaaactgtcttaatttggtcccataatt 56296276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 3217708 - 3217653
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttg 217  Q
    |||| ||||||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  3217708 cttaacttatttttgaatttcactttggtcctttaactttaaagtgttttaatttg 3217653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 8510872 - 8510951
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||| | |||||||| || ||| | ||| ||||||||    
T  8510872 cttaacttatttttgaatttcaatttggtcccttaactttaaattgtctcaatttggtcccttaactatacatccgttta 8510951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 26428673 - 26428763
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||| | |||||||| || ||| | |||| ||||||||| || ||||||    
T  26428673 cttaacttatttttgaatttcagtttggtcccctaactttaaactgtctcaatttggtcccctaactatacc-ccgtttatccaactggtcc 26428763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 28370485 - 28370536
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||||||||||||||| ||||||||||||| |||||||||| ||||||||||    
T  28370485 ttatttttgaatttcaatttggtcccttaattttaaactgtcttaatttggt 28370536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 28510354 - 28510405
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttgg 218  Q
    ||||||||||||||||||||||||||||||||||||||| || | |||||||    
T  28510354 cttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttgg 28510405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 36645516 - 36645430
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    ||||||||||||||| ||| |||| |||||||||||||   | | |||||||| ||||||||||| |||||||||  ||||||||||    
T  36645516 cttatttttgaattttattctggttccttaactttaaatcatctcaatttggtcccataattttatctccgtttacttaagtggtcc 36645430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 306594 - 306651
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| |||||||||| |||||| ||||||||| |||||||||||||||| ||||||||    
T  306594 cttaacttatttttggatttcaatttggtcccctaactttaaactgtttcaatttggt 306651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 8516951 - 8516894
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||| | ||||||||    
T  8516951 cttaacttatttttgaatttcaatttggtcccttaactttaaattgtctcaatttggt 8516894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 253
Target Start/End: Complemental strand, 39135603 - 39135518
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    ||||||||| |||||| ||| ||||| |||||||||||||| | |||||||| || ||| | |||||||||||| | |||||||||    
T  39135603 ttatttttggatttcaatttagtcccctaactttaaactgtctcaatttggtcccctaagtatacctccgtttacccaagtggtcc 39135518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 46794857 - 46794914
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| |||||||||| |||||| ||||||||| |||||||||||||||| ||||||||    
T  46794857 cttaacttatttttggatttcaatttggtcccctaactttaaactgtttcaatttggt 46794914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 56297778 - 56297721
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| |||||||||||||||||||||| |||||||| |||||||||| | ||||||||    
T  56297778 cttaacttatttttgaatttcattttgatcccttaattttaaactgtctcaatttggt 56297721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 28103585 - 28103521
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| |||||||||| |||||||||||||||||||||| |||| ||| | |||||||| ||||||    
T  28103585 cttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataa 28103521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 30441626 - 30441716
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    |||| ||||||||||||||||| ||||||||| ||| |||||||||| | ||||| || || ||| | ||||| |||||||| || |||||    
T  30441626 cttaacttatttttgaatttcaatttggtcccctaaatttaaactgtctcaatttagtcccctaaatataccttcgtttatccaactggtc 30441716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 30683120 - 30683062
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||||||||| ||||||||||||||||||||| |||| ||| | |||||||| ||||||    
T  30683120 ttatttttgattttcattttggtcccttaactataaagtgtctcaatttggtcccataa 30683062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 35051197 - 35051111
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    ||||||||||||||| | ||||||||  || ||||||||||| |||||||||| || ||| | ||| |||||||||| || ||||||    
T  35051197 cttatttttgaattttaatttggtcctctagctttaaactgtcttaatttggtcccctaaatatacatccgtttatccaactggtcc 35051111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 32508909 - 32508966
Alignment:
Q  184 ttttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    ||||| |||||||||||||||| || | |||||||| |||||| ||||||||||||||    
T  32508909 ttttgatcccttaactttaaaccgtctcaatttggtcccataactttacctccgttta 32508966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 936233 - 936288
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttg 217  Q
    |||| |||||||||| |||| ||||||||||||||||| |||| | ||||||||||    
T  936233 cttaacttatttttggattttattttggtcccttaactataaagtattttaatttg 936288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 26428944 - 26428853
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    |||| ||||||||||||||||| ||||||||  |||||||||| ||| | |||||||| || ||| | ||| || ||||| | |||||||||    
T  26428944 cttaacttatttttgaatttcaatttggtcctctaactttaaattgtctcaatttggtcccctaagtatacttctgtttacccaagtggtcc 26428853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 28370740 - 28370661
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    |||| |||||||||| |||||| ||||||||  |||||||||||||| | |||||||| || ||| | ||| ||||||||    
T  28370740 cttaacttatttttggatttcaatttggtcctctaactttaaactgtctcaatttggtcccctaaatatacttccgttta 28370661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 253
Target Start/End: Complemental strand, 53177117 - 53177026
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    |||| ||||||||||||||||| |||| || | |||||||||||||| | |||||||| || ||| | ||||| | |||| | |||||||||    
T  53177117 cttaacttatttttgaatttcaatttgatcacctaactttaaactgtctcaatttggtcccctaaatataccttcatttacccaagtggtcc 53177026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 2310881 - 2310824
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| |||||||| |||||||||||||||||| ||||| |||| ||| | ||||||||    
T  2310881 cttaacttattttcgaatttcattttggtcccctaactataaaatgtctcaatttggt 2310824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 30672163 - 30672106
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| |||||||| | |||||||||||||||| |||||||||| ||| | ||||||||    
T  30672163 cttaacttattttcggatttcattttggtcccgtaactttaaagtgtctcaatttggt 30672106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 30682737 - 30682794
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| |||||||||   ||||||||||||||||||||| |||| ||| ||||||||||    
T  30682737 cttaacttatttttagttttcattttggtcccttaactataaagtgtcttaatttggt 30682794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 31711109 - 31711166
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| |||||||||| ||||||||||||||| |||||| |||| ||| | ||||||||    
T  31711109 cttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttggt 31711166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 36644758 - 36644843
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    ||||||||| ||||| |||||| | |||||||||||||   | | ||||||||  ||||| |||| |||||||||| |||||||||    
T  36644758 cttattttttaattttattttgattccttaactttaaatcatctcaatttggtctcataactttatctccgtttatttaagtggtc 36644843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 8516899 - 8516843
Alignment:
Q  185 tttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    |||||||||||||||||||| ||| | |||||||| || ||| | ||||||||||||    
T  8516899 tttggtcccttaactttaaattgtctcaatttggtcccttaactatacctccgttta 8516843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 33377463 - 33377399
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| ||||||||||| ||||| ||||||||| ||||| |||| ||| | |||||||| ||||||    
T  33377463 cttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataa 33377399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 12203370 - 12203276
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| | |||||||| ||||||||||||||||||||| ||||||||||||||    
T  12203370 cttaacttatttttgaatttcattttggtcctttaactttaaactgtctcaatttggtcccataattttacctccgtttacctaagtggtccctt 12203276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 17916568 - 17916474
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||  ||||| |||||||||||||| ||||||||||||||    
T  17916568 cttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcacataactttacctccgtttacctaagtggtccctt 17916474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 21749901 - 21749807
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  21749901 cttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttacctccgtttacctaagtggtccctt 21749807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 5999682 - 5999588
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||| |||||||||| |||| ||| |||||    
T  5999682 cttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggttccataattttgcctccgtttacctaaatggcccctt 5999588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 17916365 - 17916454
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||||||||||||||||||||||||||| || | ||||||||  |||||||||||||| ||||| ||||||||||||||    
T  17916365 cttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcacataattttacctctgtttacctaagtggtccctt 17916454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 256
Target Start/End: Original strand, 21749699 - 21749787
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||||||||||||||||||||||||||||||||| || | ||||||||  ||||| |||||||||||||| ||||||||||||||    
T  21749699 ttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtctcataactttacctccgtttacctaagtggtccctt 21749787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 8224437 - 8224343
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||| |||||||||||||||||||||||||||||||||| || | |||||||| |||||| |||| ||||||||| ||||||||||||||    
T  8224437 cttaacttaattttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttagctccgtttacctaagtggtccctt 8224343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 12202391 - 12202297
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| || | |||||||| |||||| ||| |||||||||| ||||||||||||||    
T  12202391 cttaacttattttttaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttgcctccgtttacctaagtggtccctt 12202297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 12203167 - 12203253
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    ||||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| |||||||| ||||| |||||||||||    
T  12203167 cttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttacctcagtttacctaagtggtcc 12203253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 17915731 - 17915816
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    ||||||||||||||||||||||||||||||||||||||| || | |||||||| | |||| |||||||||||||| ||||||||||    
T  17915731 cttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtccaataactttacctccgtttacctaagtggtc 17915816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 21749313 - 21749219
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||| ||| |||||||||||| || | |||||||| |||||| |||||||| ||||| ||||||||||||||    
T  21749313 cttaacttatttttgaatttcattttgatcctttaactttaaaccgtctcaatttggtcccataactttacctctgtttacctaagtggtccctt 21749219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 17915929 - 17915840
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||||||||||||||||| |||||||||||||||| || | ||||||||  ||||| |||| ||||||||| | ||||||||||||    
T  17915929 cttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtctcataactttatctccgtttaccgaagtggtccctt 17915840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 12202214 - 12202293
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || | |||||| |  ||||| ||| ||||||||||    
T  12202214 cttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttgttctcataactttgcctccgttta 12202293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 33328392 - 33328463
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacc 233  Q
    |||| |||||||||||||||||||||| |||||||||||||||| || | |||||||| |||||| ||||||    
T  33328392 cttaacttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataactttacc 33328463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 27440274 - 27440210
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| |||||||||||||||||||||| ||||||||||||||| ||| | |||||||| ||||||    
T  27440274 cttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataa 27440210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 11104471 - 11104433
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaac 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  11104471 cttatttttgaatttcattttggtcccttaactttaaac 11104433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 197
Target Start/End: Complemental strand, 19655077 - 19655042
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaa 197  Q
    |||| |||||||||||||||||||||||||||||||    
T  19655077 cttaacttatttttgaatttcattttggtcccttaa 19655042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 19367734 - 19367791
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| |||||||| |||||||||||||||||| ||||| |||| ||| | ||||||||    
T  19367734 cttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggt 19367791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 28225441 - 28225498
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| |||||||| |||||||||||||||||| ||||| |||| ||| | ||||||||    
T  28225441 cttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggt 28225498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 27438807 - 27438871
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| |||||||||| ||||||||||||||| |||||| |||| ||| | |||||| | ||||||    
T  27438807 cttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataa 27438871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 6914911 - 6914817
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || | |||||||| ||||||||||||||||||||| ||||||||||||||    
T  6914911 cttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataattttacctccgtttacctaagtggtccctt 6914817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 32780181 - 32780087
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  32780181 cttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttacctccgtttacctaagtggtccctt 32780087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 1982729 - 1982823
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||| |||||||||||||||||||||||| | | |||||||| |||||||||| |||||||||| ||||||||||||||    
T  1982729 cttaacttatttttgaattttattttggtcccttaactttaaactatctcaatttggtcccataattttgcctccgtttacctaagtggtccctt 1982823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 2472529 - 2472435
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| ||| |||||||||| ||||||||||||||    
T  2472529 cttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttgcctccgtttacctaagtggtccctt 2472435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 37371277 - 37371188
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||||||||||||||||||||| ||||| || | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  37371277 cttatttttgaatttcattttggtcccttaactataaaccgtctcaatttggtcccataactttacctccgtttacctaagtggtccctt 37371188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 256
Target Start/End: Complemental strand, 5820776 - 5820688
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||| ||||||||||| |||||||||||||||||||| | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  5820776 ttatttttaaatttcattttagtcccttaactttaaactgtctcaatttggtcccataactttacctccgtttacctaagtggtccctt 5820688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 37371074 - 37371165
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| | |||||||| |||||| ||||| |||||||| |||||||||||    
T  37371074 cttaacttatttttgaatttcattttggtcccttaactttaaattgtctcaatttggtcccataactttacatccgtttacctaagtggtcc 37371165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 12938730 - 12938636
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||| ||||||||||||||| |||||||||||||||| | |||||||| |||||| |||||||| ||||| ||||||||||||||    
T  12938730 cttaacttatttttaaatttcattttggtctcttaactttaaactgtctcaatttggtcccataactttacctctgtttacctaagtggtccctt 12938636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 12952833 - 12952739
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| || | |||||||| |||||| |||||||| ||||| ||||||||||||||    
T  12952833 cttaacttatttttaaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttacctctgtttacctaagtggtccctt 12952739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 5820579 - 5820668
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||||||||||||||||||||||||||  || | |||||||| |||||| ||||||| |||||| ||||||||||||||    
T  5820579 cttatttttgaatttcattttggtcccttaactttaaatcgtctcaatttggtcccataactttacctacgtttacctaagtggtccctt 5820668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 37380393 - 37380304
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||||||||||||||| ||||||||||  || | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  37380393 cttatttttgaatttcattttggtcccgtaactttaaatcgtctcaatttggtaccataactttacctccgtttacctaagtggtccctt 37380304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 2472347 - 2472431
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaa 246  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| |||||||||||||| ||||    
T  2472347 cttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttacctccgtttacctaa 2472431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 168 - 256
Target Start/End: Original strand, 12938528 - 12938616
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||||||||||||| |||||||||||| || | |||||||| |||||| |||||||| ||||| ||||||||||||||    
T  12938528 ttatttttgaatttcattttggtcctttaactttaaaccgtctcaatttggtcccataactttacctctgtttacctaagtggtccctt 12938616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 168 - 256
Target Start/End: Original strand, 37380195 - 37380283
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||| |||||||||||| | |||||||||||||||| || |||||||||| |||||||||||| |||||||| ||||||||||||||    
T  37380195 ttatttgtgaatttcatttggatcccttaactttaaaccgtcttaatttggtcccataattttacttccgtttacctaagtggtccctt 37380283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 16802218 - 16802312
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| ||| |||||||||| | |||| |||||||    
T  16802218 cttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttgcctccgtttacccaagtagtccctt 16802312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 38471311 - 38471370
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  38471311 cttatttttgaatttcattttggtcccttaactttaaattgtttcaatttggttccataa 38471370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 1982937 - 1982843
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||| || ||||||||||  ||||| |||  ||||||||| |||||||| |||||    
T  1982937 cttaacttattttttaatttcattttcgtcccttaactttaaaccgtcttaatttggtctcataactttgtctccgtttacctaagtggcccctt 1982843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 21306608 - 21306702
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||| | ||| ||||||| || | ||||||||  ||||| |||||||||||||| |||||| |||||||    
T  21306608 cttaacttatttttgaatttcattttggtctcataattttaaaccgtctcaatttggtctcataactttacctccgtttacctaagtagtccctt 21306702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 21314446 - 21314540
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||| | ||| ||||||| || | ||||||||  ||||| |||||||||||||| |||||| |||||||    
T  21314446 cttaacttatttttgaatttcattttggtctcataattttaaaccgtctcaatttggtctcataactttacctccgtttacctaagtagtccctt 21314540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 12937981 - 12937917
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || | |||||||| ||||||    
T  12937981 cttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataa 12937917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 19050766 - 19050857
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    |||| |||||||||| |||||| ||||||||| |||||||||||||| | |||||||| || ||| | |||||||||||| | |||||||||    
T  19050766 cttaacttatttttggatttcaatttggtcccctaactttaaactgtctcaatttggtcccctaagtatacctccgtttacccaagtggtcc 19050857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 38477232 - 38477153
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    |||| ||||| |||||||||||||||| |||||||||||||||| || | |||||||| | |||| ||||||||||||||    
T  38477232 cttaacttatgtttgaatttcattttgatcccttaactttaaaccgtctcaatttggtccaataactttacctccgttta 38477153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 3077083 - 3076993
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    |||| ||||||||||||||||| |||| ||||||||||||||||||| | |||||||| || ||| | |||||| ||||| | ||||||||    
T  3077083 cttaacttatttttgaatttcaatttgatcccttaactttaaactgtctcaatttggtcccctaagtatacctctgtttaccaaagtggtc 3076993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 15154161 - 15154075
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    ||||||||||||||||| ||||||||| |||||||||||||| | ||||||||  | ||| | |||||||||||| | |||||||||    
T  15154161 cttatttttgaatttcaatttggtcccctaactttaaactgtctcaatttggtcgcctaagtatacctccgtttacccaagtggtcc 15154075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 19051038 - 19050949
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||| | ||||| | ||| ||| | ||||||||||||| |||||||||    
T  19051038 cttaacttatttttgaatttcaatttggtcccctaactttaaactgtctcaattt-gatccctaagtatacctccgtttatttaagtggtc 19050949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 12952132 - 12952075
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || | ||||||||    
T  12952132 cttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggt 12952075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 21306826 - 21306725
Alignment:
Q  152 tgctttgttgcttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggt 251  Q
    ||||||| | |||| ||||||||||||||||||||| ||||||||||||||||| || | | ||| || | |||| ||||| |||||||| | |||||||    
T  21306826 tgctttggtccttaacttatttttgaatttcattttcgtcccttaactttaaaccgtctcattttagtcctataactttacatccgtttaccaaagtggt 21306727  T
Q  252 cc 253  Q
    ||    
T  21306726 cc 21306725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 21314664 - 21314563
Alignment:
Q  152 tgctttgttgcttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggt 251  Q
    ||||||| | |||| ||||||||||||||||||||| ||||||||||||||||| || | | ||| || | |||| ||||| |||||||| | |||||||    
T  21314664 tgctttggtccttaacttatttttgaatttcattttcgtcccttaactttaaaccgtctcattttagtcctataactttacatccgtttaccaaagtggt 21314565  T
Q  252 cc 253  Q
    ||    
T  21314564 cc 21314563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 10085944 - 10085880
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| ||||||||||||||||| ||||||| |||||||||||| ||||| |||||||| ||||||    
T  10085944 cttaacttatttttgaatttcactttggtctcttaactttaaagtgtttcaatttggtcccataa 10085880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 12937806 - 12937898
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccc 254  Q
    |||| ||||||||| ||||| |||||| |||||||||||||||| || | |||||||| || ||| ||| |||||||||| | ||||||||||    
T  12937806 cttaacttattttttaattttattttgatcccttaactttaaaccgtctcaatttggtcccgtaactttgcctccgtttacccaagtggtccc 12937898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 12952677 - 12952714
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaac 205  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12952677 ttatttttgaatttcattttggtcccttaactttaaac 12952714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 16802388 - 16802347
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaa 203  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  16802388 cttaacttatttttgaatttcattttggtcccttaactttaa 16802347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 15615059 - 15614995
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    ||||||||||||||| |||||||||||||||  ||||| |||| ||| | |||||||||||||||    
T  15615059 cttatcttatttttggatttcattttggtccgctaactataaagtgtctcaatttggttccataa 15614995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 21387654 - 21387718
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| ||||||||||||||||||||||||||| ||||| |||| ||| | |||||||| ||||||    
T  21387654 cttaacttatttttgaatttcattttggtcccctaactataaaatgtctcaatttggtcccataa 21387718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 38394802 - 38394723
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    |||| ||||||||||||||| | ||||||||| |||||||||||||| | ||||| ||| | ||| | ||||||||||||    
T  38394802 cttaacttatttttgaattttaatttggtcccctaactttaaactgtctcaatttagtttcctaagtatacctccgttta 38394723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 641974 - 641888
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    |||||||||  |||||| ||||||||| |||||||||||||| | |||||||| || ||| | |||||| ||||| | |||||||||    
T  641974 cttatttttagatttcaatttggtcccctaactttaaactgtctcaatttggtcccctaagtatacctctgtttaccgaagtggtcc 641888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 8705872 - 8705918
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgt 208  Q
    |||| ||||||||||||||||| ||| ||||||||||||||||||||    
T  8705872 cttaacttatttttgaatttcaatttcgtcccttaactttaaactgt 8705918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 15153894 - 15153951
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| ||||||||||||||| | |||||||| ||||||||||||||| | ||||||||    
T  15153894 cttaacttatttttgaattttaatttggtcctttaactttaaactgtctcaatttggt 15153951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 6914732 - 6914772
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaacttta 202  Q
    |||| ||||||||||||||||||||||||||| ||||||||    
T  6914732 cttaacttatttttgaatttcattttggtcccataacttta 6914772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 7345489 - 7345425
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| ||||||||||||||||||||||||||  ||||| |||| ||| | |||||||| ||||||    
T  7345489 cttaacttatttttgaatttcattttggtcctctaactataaagtgtctcaatttggtcccataa 7345425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 18693715 - 18693779
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| ||||||||||||||| ||||||||||||||||| |||| ||| | ||| |||| ||||||    
T  18693715 cttaacttatttttgaattttattttggtcccttaactataaaatgtctcaatctggtcccataa 18693779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 641707 - 641798
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    |||| ||||||||||||||||| || |||||| || ||||||| ||| | |||||| | || ||| | ||| | ||||||||||||||||||    
T  641707 cttaacttatttttgaatttcaattcggtcccctagctttaaagtgtctcaatttgatcccctaagtatactttcgtttatctaagtggtcc 641798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 256
Target Start/End: Original strand, 6914755 - 6914797
Alignment:
Q  214 tttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||| |||||| |||||||||||||| ||||||||||||||    
T  6914755 tttggtcccataactttacctccgtttacctaagtggtccctt 6914797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 32411981 - 32412023
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaa 204  Q
    |||| |||||||||| |||||| ||||||||||||||||||||    
T  32411981 cttaacttatttttggatttcaatttggtcccttaactttaaa 32412023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 42979471 - 42979531
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataatt 228  Q
    ||||||||| |||||||||||||||  ||||| |||| ||||| |||||||| | ||||||    
T  42979471 ttatttttggatttcattttggtcctctaactataaagtgtttcaatttggtccaataatt 42979531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 8e-30; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 30431392 - 30431486
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||| | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  30431392 cttaacttatttttgaatttcattttggtcccttaattttaaactgtctcaatttggtcccataactttacctccgtttacctaagtggtccctt 30431486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 51214265 - 51214171
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||| |||||||||| ||| ||||||||||||||    
T  51214265 cttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcccataactttacctccgcttacctaagtggtccctt 51214171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 30432706 - 30432617
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||| |||||||||||| |||||||||||||||| |||| |||||||| |||||| |||||||||||||||||||||||||||||    
T  30432706 cttatttttaaatttcattttgatcccttaactttaaaccgtttcaatttggtcccataactttacctccgtttatctaagtggtccctt 30432617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 23886133 - 23886227
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| |||||||||||||| |||||| |||||||    
T  23886133 cttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttacctccgtttacctaagttgtccctt 23886227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 44384395 - 44384301
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||| | |||||||| |||||| ||||||||| |||| ||||||||||||||    
T  44384395 cttaacttatttttgaatttcattttagtcccttaactttaaactgtctcaatttggtcccataactttacctccctttacctaagtggtccctt 44384301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 30431977 - 30432066
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||||||||||||||||| |||||||||||||||| || | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  30431977 cttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataactttacctccgtttacctaagtggtccctt 30432066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 256
Target Start/End: Original strand, 12106404 - 12106492
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||||||||| ||||||||||||||||||||||| || | |||||||| ||||||||||||||| ||||| ||||||||||||||    
T  12106404 ttatttttgaatttaattttggtcccttaactttaaaccgtctcaatttggtcccataattttacctctgtttacctaagtggtccctt 12106492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 256
Target Start/End: Complemental strand, 23886336 - 23886248
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| |||||||| ||||| ||||||||||||||    
T  23886336 ttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttacctctgtttacctaagtggtccctt 23886248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 256
Target Start/End: Original strand, 51214063 - 51214151
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||| | |||||| |||||||| ||||| ||||||||||||||    
T  51214063 ttatttttgaatttcattttggtcccttaactttaaactgtctcaatttgatcccataactttacctctgtttacctaagtggtccctt 51214151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 5810104 - 5810018
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    |||||||||||||||||||||| |||||||||||||||| || | |||||||| |||||| |||||||||||||| |||||||||||    
T  5810104 cttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataactttacctccgtttacctaagtggtcc 5810018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 7575577 - 7575483
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||  ||||  ||| |||||||||| ||||||||||||||    
T  7575577 cttaacttatttttgaatttcattttggtcccttaactttaaaccgtcttaatttggtctcatacctttgcctccgtttacctaagtggtccctt 7575483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 7583727 - 7583821
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||| ||||||||||||| || | ||||| || |||||| |||||||||||||| ||||||||||||||    
T  7583727 cttaacttatttttgaatttcattttggtcacttaactttaaaccgtctcaatttagtcccataactttacctccgtttacctaagtggtccctt 7583821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 7583930 - 7583844
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    ||||||||||||||||||||||||||||||||||||||| || | |||||||  |||||| |||||||||||||| |||||||||||    
T  7583930 cttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggccccataactttacctccgtttacctaagtggtcc 7583844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 12105376 - 12105470
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||||||||||||||||  || | |||||||| | |||| |||||||||||||| ||||||||||||||    
T  12105376 cttaacttatttttgaatttcattttggtcccttaactttaaagcgtctcaatttggtccaataactttacctccgtttacctaagtggtccctt 12105470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 23886925 - 23886831
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||||||||||||||||  || | |||||||| |||||| ||| |||||||||| ||||||||||||||    
T  23886925 cttaacttatttttgaatttcattttggtcccttaactttaaatcgtctcaatttggtcccataactttgcctccgtttacctaagtggtccctt 23886831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 46987342 - 46987436
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| ||||||||  |||| ||||||||||||||    
T  46987342 cttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttacctctctttacctaagtggtccctt 46987436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 46988568 - 46988474
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || | || ||||| | |||| |||||||||||||| ||||||||||||||    
T  46988568 cttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaacttggtccaataactttacctccgtttacctaagtggtccctt 46988474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 252
Target Start/End: Complemental strand, 30431592 - 30431507
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    |||||||| |||||||||||||||||||||||||||||| || | |||||||| |||||| |||||||||||||| ||||||||||    
T  30431592 cttattttcgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttacctccgtttacctaagtggtc 30431507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 168 - 252
Target Start/End: Complemental strand, 54109715 - 54109631
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    ||||||||||||||||||||||||||||||||||||| ||| | ||||||||  ||||| |||||||||||||| ||||||||||    
T  54109715 ttatttttgaatttcattttggtcccttaactttaaattgtctcaatttggtctcataactttacctccgtttacctaagtggtc 54109631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 12106606 - 12106512
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||| ||||||||||||| || | |||||||| |||||| ||||||||  |||| ||||||||||||||    
T  12106606 cttaacttatttttgaatttcattttggtctcttaactttaaaccgtctcaatttggtcccataactttacctctctttacctaagtggtccctt 12106512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 13041964 - 13042054
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    |||| |||||||||||||||||||||| |||||||||||||||| || | |||||||| |||||| ||| |||||||||| ||||||||||    
T  13041964 cttaacttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataactttgcctccgtttacctaagtggtc 13042054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 13050041 - 13050131
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    |||| |||||||||||||||||||||| |||||||||||||||| || | |||||||| |||||| ||| |||||||||| ||||||||||    
T  13050041 cttaacttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataactttgcctccgtttacctaagtggtc 13050131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 250
Target Start/End: Complemental strand, 46987543 - 46987461
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtgg 250  Q
    |||||||||||||| ||||||||||||||||||||||| || | |||||||| ||||||||||||||| ||||| ||||||||    
T  46987543 ttatttttgaattttattttggtcccttaactttaaaccgtctcaatttggtcccataattttacctctgtttacctaagtgg 46987461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 19283955 - 19283866
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||| ||||||||||||||||||||||| || | |||||||| | |||| ||||| |||||||| ||||||||||||||    
T  19283955 cttatttttgaattttattttggtcccttaactttaaaccgtctcaatttggtcctataactttacatccgtttacctaagtggtccctt 19283866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 256
Target Start/End: Complemental strand, 30432174 - 30432086
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||||||||| |||||||| | ||||||||||||| | | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  30432174 ttatttttgaattttattttggtactttaactttaaactatctcaatttggtcccataactttacctccgtttacctaagtggtccctt 30432086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 167 - 257
Target Start/End: Original strand, 13997280 - 13997370
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctta 257  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||| || ||||||||||| |||  ||||  ||||||||| ||||    
T  13997280 cttatttttgaatttcattttggtcccttaactttaaaccgtttcaatttagtcccataattttatctctatttacttaagtggtctctta 13997370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 252
Target Start/End: Original strand, 51213468 - 51213558
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    |||| ||||||||||||||||||||| ||||||||||||||||| || | |||||||| |||||| ||| ||| |||||| ||||||||||    
T  51213468 cttaacttatttttgaatttcattttcgtcccttaactttaaaccgtctcaatttggtcccataactttgccttcgtttacctaagtggtc 51213558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 54109513 - 54109607
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||| ||||||||||||||||  || | |||||||| | |||| ||||||| |||||| ||||||||||||||    
T  54109513 cttaacttatttttgaatttcattttagtcccttaactttaaatcgtctcaatttggtcctataactttacctgcgtttacctaagtggtccctt 54109607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 250
Target Start/End: Original strand, 19283751 - 19283839
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtgg 250  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || | ||||| || |||||| ||| |||| ||||| ||||||||    
T  19283751 cttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttagtcccataactttgcctctgtttacctaagtgg 19283839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 51213676 - 51213582
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||| ||||||||||||||||  | | |||||||| |||||| |||  |||||||||  |||||||||||||    
T  51213676 cttaacttatttttgaatttcattttgatcccttaactttaaaccatctcaatttggtcccataactttgtctccgtttacgtaagtggtccctt 51213582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 13997478 - 13997389
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||| |||||| |||||||||||||||| || | || ||||| |||||| ||||||| ||||||  |||||||||||||    
T  13997478 cttatttttgaattttattttgatcccttaactttaaaccgtctcaacttggtcccataactttaccttcgtttacataagtggtccctt 13997389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 30838569 - 30838477
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataat--tttacctccgtttatctaagtggtc 252  Q
    |||| ||||||||||||||| |||||||||||||||||||||||| | | |||||||| |||||||  ||||||| ||||||  |||||||||    
T  30838569 cttaacttatttttgaattttattttggtcccttaactttaaactatctcaatttggtcccataatactttaccttcgtttacataagtggtc 30838477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 23886717 - 23886808
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    |||| ||||||||| |||||||||||  ||||||||||||||| ||| | |||||||| |||||| ||| |||||||||| ||| |||||||    
T  23886717 cttaacttattttttaatttcatttttatcccttaactttaaaatgtctcaatttggtcccataactttgcctccgtttacctaggtggtcc 23886808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 12105584 - 12105490
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||| ||||| |||||||||| || | |||||||| |||||| ||| ||| |||||| ||||| || |||||    
T  12105584 cttaacttatttttgaatttcattttgatccctcaactttaaaccgtctcaatttggtcccataactttgccttcgtttacctaagcggcccctt 12105490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 228
Target Start/End: Complemental strand, 54654065 - 54653999
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataatt 228  Q
    |||| |||||||||| |||||||||||||||||||||| |||| ||| | |||||||| ||||||||    
T  54654065 cttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataatt 54653999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 46988361 - 46988446
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaag 247  Q
    |||| |||||||||||||||||||||| ||| | |||||||||| || | |||||||| |||||| ||| ||| |||||| |||||    
T  46988361 cttaacttatttttgaatttcattttgatccttcaactttaaaccgtctcaatttggtcccataactttgccttcgtttacctaag 46988446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 51825720 - 51825656
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| |||||||||| |||||| ||||||||||||||| |||| ||||| |||||||| ||||||    
T  51825720 cttaacttatttttggatttcactttggtcccttaactataaagtgtttcaatttggtcccataa 51825656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 253
Target Start/End: Original strand, 30838364 - 30838450
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    ||||||||||||||| ||||||||| ||||||||||||| || | ||||| || | |||| ||||  || ||||| |||||||||||    
T  30838364 cttatttttgaattttattttggtcacttaactttaaaccgtctcaatttagtcctataactttagttctgtttacctaagtggtcc 30838450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 208
Target Start/End: Original strand, 42570029 - 42570075
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgt 208  Q
    |||| ||||||||||||||||| ||||||||| ||||||||||||||    
T  42570029 cttaacttatttttgaatttcaatttggtcccctaactttaaactgt 42570075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 2225123 - 2225066
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| |||||||||| |||||| ||||||||| |||||||||||||| | ||||||||    
T  2225123 cttaacttatttttggatttcaatttggtcccctaactttaaactgtctcaatttggt 2225066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 11220757 - 11220700
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| ||||||||||||||||||||||||||| ||||| |||| ||| | ||||||||    
T  11220757 cttaacttatttttgaatttcattttggtcccctaactataaagtgtctcaatttggt 11220700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 7820407 - 7820463
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttgg 218  Q
    |||| ||||||||||||||||||||||||||  ||||| |||| ||||| |||||||    
T  7820407 cttaacttatttttgaatttcattttggtcctctaactataaagtgtttcaatttgg 7820463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 2224889 - 2224968
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    |||| |||||||||| |||| | ||||||||||||||||||| |||| | |||||||| || ||| | |||||| |||||    
T  2224889 cttaacttatttttggattttaatttggtcccttaactttaatctgtctcaatttggtcccctaagtatacctctgttta 2224968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 256
Target Start/End: Original strand, 7575392 - 7575463
Alignment:
Q  185 tttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||||||||   ||| ||||| || |||||| ||| |||||||||| ||||||||| ||||    
T  7575392 tttggtcccttaactttaaatcatttcaatttagtcccataactttgcctccgtttacctaagtggttcctt 7575463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 26799005 - 26798926
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    |||| ||||||||||  ||| ||||||||||| ||||| |||| ||| | |||||||| |||||||| | ||||||||||    
T  26799005 cttaacttatttttggtttttattttggtcccctaactataaaatgtctcaatttggtcccataattcttcctccgttta 26798926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 19579393 - 19579336
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| |||||||| | |||||||||||||||||||||| |||| ||| | ||||||||    
T  19579393 cttaacttattttcggatttcattttggtcccttaactataaagtgtctcaatttggt 19579336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 47855437 - 47855380
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| |||||||||| ||||||||||||||| |||||| |||| ||| | ||||||||    
T  47855437 cttaacttatttttggatttcattttggtccgttaactataaagtgtctcaatttggt 47855380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 55443649 - 55443592
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| |||||||| |||||||||||||||||| ||||| |||| ||| | ||||||||    
T  55443649 cttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggt 55443592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 8371237 - 8371301
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| |||||||||   ||||||||||||||| ||||| |||| ||| | |||||||||||||||    
T  8371237 cttaacttattttttgttttcattttggtcccctaactataaaatgtctcaatttggttccataa 8371301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 8372715 - 8372651
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| ||||||||||  ||||||||||||||| ||||| |||| ||| | |||||||| ||||||    
T  8372715 cttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataa 8372651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 10987752 - 10987688
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| ||||||||||  ||||||||||||||| ||||| |||| ||| | |||||||| ||||||    
T  10987752 cttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataa 10987688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 11219452 - 11219504
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||||||||| |||||||||||||||| ||||| |||| ||| | ||||||||    
T  11219452 cttatttttggatttcattttggtcccctaactataaagtgtctcaatttggt 11219504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 41386147 - 41386211
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| ||||||||||  ||||| ||||||||| ||||| |||| ||| | |||||||||||||||    
T  41386147 cttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggttccataa 41386211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 8e-30; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 5435176 - 5435270
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  5435176 cttaacttatatttgaatttcattttggtcccttaactttaaactgtctcaatttggtcccataactttacctccgtttacctaagtggtccctt 5435270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 27262735 - 27262824
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  27262735 cttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttacctccgtttacctaagtggtccctt 27262824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 43015556 - 43015647
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||| |||||||| ||||| |||||||||||    
T  43015556 cttaacttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggtcccataactttacctctgtttacctaagtggtcc 43015647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 27264672 - 27264582
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||| | |||||||| |||||| |||||||||||||| ||||||||||    
T  27264672 cttaacttatttttgaatttcattttggtcccttaactttaaattgtctcaatttggtcccataactttacctccgtttacctaagtggtc 27264582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 17859365 - 17859271
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||| | |||||||| |||||| |||||||  ||||| ||||||||||||||    
T  17859365 cttaacttatttttgaatttcattttggtcccttaacgttaaactgtctcaatttggtcccataactttacctttgtttacctaagtggtccctt 17859271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 42772455 - 42772549
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||| |||||||||||||||| || | |||||||| |||||| |||||||||||||| ||||||| ||||||    
T  42772455 cttaacttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataactttacctccgtttacctaagtgatccctt 42772549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 27262933 - 27262844
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||||||||||||||||  |||||||||||||||| || | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  27262933 cttatttttgaatttcattttcatcccttaactttaaaccgtatcaatttggtcccataactttacctccgtttacctaagtggtccctt 27262844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 27990391 - 27990482
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||| || |||||||||| |||||| |||||||| ||||| |||||||||||    
T  27990391 cttaacttatttttgaattttattttggtcccttaaatttaaaccgtcttaatttggtcccataactttacctcagtttacctaagtggtcc 27990482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 28076924 - 28077015
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||| || |||||||||| |||||| |||||||| ||||| |||||||||||    
T  28076924 cttaacttatttttgaattttattttggtcccttaaatttaaaccgtcttaatttggtcccataactttacctcagtttacctaagtggtcc 28077015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 15816765 - 15816671
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||| | |||||||| |||||| ||||||||  |||| ||||||| ||||||    
T  15816765 cttaacttatttttgaatttcattttcgtcccttaactttaaactgtctcaatttggtcccataactttacctctatttacctaagtgatccctt 15816671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 17858683 - 17858589
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||| |||||||||||||||| || | |||||||| |||||| |||  ||||||||| ||||||||||||||    
T  17858683 cttaacttatttttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataactttgtctccgtttacctaagtggtccctt 17858589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 43019345 - 43019251
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||| | |||||||| |||||| ||||||| |||||| |||  |||||||||    
T  43019345 cttaacttatttttgaatttcattttggtcccttaactttaacctgtctcaatttggtcccataactttaccttcgtttacctagttggtccctt 43019251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 15808097 - 15808176
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    |||| ||||||||||||||||||||| |||||||||||||||||| | | |||||||| ||||||||||||||| |||||    
T  15808097 cttaacttatttttgaatttcattttagtcccttaactttaaactatctcaatttggtcccataattttacctctgttta 15808176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 17179350 - 17179260
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||| | |||||||| || ||| | |||||||||||||| ||||||||    
T  17179350 cttaacttatttttgaatttcaatttggtcccctaactttaaactgtctcaatttggtcccctaagtatacctccgtttatccaagtggtc 17179260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 256
Target Start/End: Original strand, 17858481 - 17858569
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||| |||||||||||||||||||||| || | |||||||| | |||| ||| |||||||||| |||| |||||||||    
T  17858481 ttatttttgaatttcgttttggtcccttaactttaaaccgtctcaatttggtccaataactttgcctccgtttacctaaatggtccctt 17858569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 257
Target Start/End: Complemental strand, 14482190 - 14482095
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctta 257  Q
    |||| |||||||||||||||||||||||| |||||||||||||  || | |||||||| ||| |||||| | ||||||||  ||||||||||||||    
T  14482190 cttaacttatttttgaatttcattttggttccttaactttaaagcgtctcaatttggtcccaaaattttgcatccgtttacgtaagtggtccctta 14482095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 20948419 - 20948498
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||| | |||||||| || ||||| ||||||||||||    
T  20948419 cttaacttatttttgaatttcaatttggtcccttaactttaaattgtctcaatttggtcccttaattatacctccgttta 20948498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 17179077 - 17179168
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    |||| ||||||||||||||| | ||||||||| |||||||||||||| | |||||||| || ||| | |||||||||||||| || ||||||    
T  17179077 cttaacttatttttgaattttaatttggtcccctaactttaaactgtctcaatttggtcccctaagtatacctccgtttatccaactggtcc 17179168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 30202982 - 30202892
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    |||| |||||||||| |||||| ||||||||| |||||||||||||| | |||||| | || ||| | |||||||||||||| ||||||||    
T  30202982 cttaacttatttttggatttcaatttggtcccctaactttaaactgtctcaatttgatcccttaagtatacctccgtttatccaagtggtc 30202892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 11392055 - 11391961
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||  ||| |||||||||||| || | |||||| | | |||| ||| |||||||||| |||||| |||||||    
T  11392055 cttaacttatttttgaatttcatttttatcctttaactttaaaccgtctcaatttgatcctataactttgcctccgtttacctaagttgtccctt 11391961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 6706943 - 6707007
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| |||||||||| |||||||||||||||| ||||| |||| ||| | |||||||||||||||    
T  6706943 cttaacttatttttggatttcattttggtcccctaactataaagtgtctcaatttggttccataa 6707007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 7038431 - 7038367
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| |||||||||| |||||||||||||||||||||| |||| ||| | |||||||| ||||||    
T  7038431 cttaacttatttttggatttcattttggtcccttaactataaagtgtctcaatttggtcccataa 7038367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 254
Target Start/End: Complemental strand, 21545168 - 21545076
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccc 254  Q
    |||| |||||||||| ||||||||||||||||||||||||||| ||| | || ||||| || ||| | |  ||||||||| | ||||||||||    
T  21545168 cttaacttatttttggatttcattttggtcccttaactttaaattgtctcaaattggtcccttaagtatctctccgtttaccaaagtggtccc 21545076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 22653126 - 22653047
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    |||| |||||||||| |||||| | ||||||| |||||||||||||| | |||||||| || ||| | ||||||||||||    
T  22653126 cttaacttatttttggatttcaatatggtcccctaactttaaactgtctcaatttggtcccctaagtatacctccgttta 22653047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 30202710 - 30202801
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    |||| ||||||||||||||||| ||||||||| |||||||||| ||| | |||||| | || ||| | |||| ||||||||| || ||||||    
T  30202710 cttaacttatttttgaatttcaatttggtcccctaactttaaattgtctcaatttgatcccctaagtatacccccgtttatccaactggtcc 30202801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 11391895 - 11391953
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    ||||||||||||||||||||  |||||||||||||||| || | |||||||| ||||||    
T  11391895 ttatttttgaatttcatttttatcccttaactttaaaccgtctcaatttggtcccataa 11391953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 11408556 - 11408614
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    ||||||||||||||||||||  |||||||||||||||| || | |||||||| ||||||    
T  11408556 ttatttttgaatttcatttttatcccttaactttaaaccgtctcaatttggtcccataa 11408614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 11408716 - 11408622
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||  ||| |||||||||||| || | |||||| | | |||| ||| ||||||||||  ||||| |||||||    
T  11408716 cttaacttatttttgaatttcatttttatcctttaactttaaaccgtatcaatttgatcctataactttgcctccgtttacttaagttgtccctt 11408622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 42368407 - 42368317
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    |||| |||||||||| |||||||||||||||| ||||| |||| ||| |  ||||||| |||||| | || ||||||||| | ||||||||    
T  42368407 cttaacttatttttggatttcattttggtcccctaactataaagtgtctcgatttggtcccataagtatatctccgtttacccaagtggtc 42368317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 5564076 - 5564133
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| ||||||||||||||||||||||||||||||| | |||| ||| | ||||||||    
T  5564076 cttaacttatttttgaatttcattttggtcccttaattataaagtgtctcaatttggt 5564133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 5565244 - 5565187
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| ||||||||||||||||||||||||||||||| | |||| ||| | ||||||||    
T  5565244 cttaacttatttttgaatttcattttggtcccttaattataaagtgtctcaatttggt 5565187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 12854203 - 12854139
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| |||||||||  |||||||||||||||||||||| |||| ||| | |||||||| ||||||    
T  12854203 cttaacttatttttagatttcattttggtcccttaactataaagtgtctcaatttggtcccataa 12854139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 254
Target Start/End: Original strand, 21541086 - 21541170
Alignment:
Q  170 atttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccc 254  Q
    ||||||| ||||||||||||||||||||||||||| ||| | || ||||| || ||| | |  ||||||||| | ||||||||||    
T  21541086 atttttggatttcattttggtcccttaactttaaattgtctcaaattggtcccttaagtatctctccgtttaccaaagtggtccc 21541170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 22900216 - 22900268
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||||||||| |||||| ||||||||| |||||||||||||| | ||||||||    
T  22900216 cttatttttggatttcaatttggtcccctaactttaaactgtctcaatttggt 22900268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 3255987 - 3255920
Alignment:
Q  152 tgctttgttgcttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    ||||||||  |||| |||||||| | |||||||||||||||| ||||| |||| ||||| ||||||||    
T  3255987 tgctttgtcccttaacttattttcggatttcattttggtcccctaactataaagtgtttcaatttggt 3255920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 7036988 - 7037047
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||||||||| |||||| ||| ||||||||||| |||| ||||| |||||||| ||||||    
T  7036988 cttatttttggatttcactttagtcccttaactataaagtgtttcaatttggtcccataa 7037047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 17859215 - 17859266
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    ||||||||||||||||||||| ||| ||||| ||||||||| | ||||||||    
T  17859215 ttatttttgaatttcattttgatcctttaacgttaaactgtctcaatttggt 17859266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 239
Target Start/End: Complemental strand, 22901045 - 22900974
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtt 239  Q
    |||||||||||||| | ||||||||| |||||||||||||| | ||||| || || ||| | ||||||||||    
T  22901045 ttatttttgaattttaatttggtcccctaactttaaactgtctcaatttagtcccctaagtatacctccgtt 22900974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 6209158 - 6209097
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataatt 228  Q
    |||||||||| ||||||||||||||   ||||| |||| ||| |||||||||| ||||||||    
T  6209158 cttatttttggatttcattttggtcatctaactataaagtgtcttaatttggtcccataatt 6209097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 22900166 - 22900215
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttg 217  Q
    |||||||||||||| | ||||||||| |||||||||||||| | ||||||    
T  22900166 ttatttttgaattttaatttggtcccctaactttaaactgtctcaatttg 22900215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 12852903 - 12852967
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| |||| ||||| |||||||||||||||| ||||| |||| ||| | |||||||| ||||||    
T  12852903 cttaacttacttttggatttcattttggtcccctaactataaagtgtctcaatttggtcccataa 12852967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 14481953 - 14481989
Alignment:
Q  169 tatttttgaatttcattttggtcccttaactttaaac 205  Q
    |||||||||||||||||||  ||||||||||||||||    
T  14481953 tatttttgaatttcatttttatcccttaactttaaac 14481989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 23178981 - 23178917
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| |||||||||   ||||| ||||||||| ||||| ||||||||||||| ||||| ||||||    
T  23178981 cttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcccataa 23178917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 23590238 - 23590174
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| |||||||||   ||||| ||||||||| ||||| ||||||||||||| ||||| ||||||    
T  23590238 cttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcccataa 23590174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 204
Target Start/End: Complemental strand, 27657840 - 27657804
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaa 204  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  27657840 ttatttttggattttattttggtcccttaactttaaa 27657804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 230
Target Start/End: Complemental strand, 41796051 - 41795983
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataatttt 230  Q
    |||| ||||||||||| |||||||||| |||| ||||| |||| ||| | |||||||| |||| |||||    
T  41796051 cttaacttatttttgattttcattttgatcccctaactataaagtgtctcaatttggtcccatcatttt 41795983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 30865219 - 30865130
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  30865219 cttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttacctccgtttacctaagtggtccctt 30865130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 256
Target Start/End: Original strand, 40102854 - 40102942
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  40102854 ttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttacctccgtttacctaagtggtccctt 40102942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 3271177 - 3271271
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||||||||||||||||  || | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  3271177 cttaacttatttttgaatttcattttggtcccttaactttaaatcgtctcaatttggtcccataactttacctccgtttacctaagtggtccctt 3271271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 15989369 - 15989275
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||| |||||||||||||||||||||| || | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  15989369 cttaacttatttttgaatttcgttttggtcccttaactttaaaccgtctcaatttggtcccataactttacctccgtttacctaagtggtccctt 15989275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 21551939 - 21552033
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||||||||||||||||||||| | | |||||||| |||||| |||||||| ||||| ||||||||||||||    
T  21551939 cttaacttatttttgaatttcattttggtcccttaactttaaactatctcaatttggtcccataactttacctctgtttacctaagtggtccctt 21552033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 21552985 - 21553079
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||||||||||||||||||||| | | |||||||| |||||| |||||||| ||||| ||||||||||||||    
T  21552985 cttaacttatttttgaatttcattttggtcccttaactttaaactatctcaatttggtcccataactttacctctgtttacctaagtggtccctt 21553079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 4675972 - 4675883
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||| ||||||||||||||||||||||| || | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  4675972 cttatttttgaattttattttggtcccttaactttaaaccgtctcaatttggtcccataactttacctccgtttacctaagtggtccctt 4675883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 3272124 - 3272030
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || | ||||| || |||||| ||| |||||||||| ||||||||||||||    
T  3272124 cttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaattttgtcccataactttgcctccgtttacctaagtggtccctt 3272030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 3612682 - 3612588
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||| ||||||||| |||||||||||| ||| | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  3612682 cttaacttatttttgaattttattttggtctcttaactttaaattgtctcaatttggtcccataactttacctccgtttacctaagtggtccctt 3612588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 15989161 - 15989255
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| |||||||||||||| |||| |||| ||||    
T  15989161 cttaacttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttacctccgtttacctaaatggttcctt 15989255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 30864554 - 30864460
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||| |||||||| ||||||| || | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  30864554 cttaacttatttttgaatttcattttgatcccttaattttaaaccgtctcaatttggtcccataactttacctccgtttacctaagtggtccctt 30864460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 252
Target Start/End: Original strand, 3612486 - 3612571
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    ||||||||| ||||||||||||||||||||||||||||| || | |||||||| |||||| |||||||||||||| ||||||||||    
T  3612486 cttatttttaaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttacctccgtttacctaagtggtc 3612571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 168 - 256
Target Start/End: Original strand, 30865022 - 30865110
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||||||||||||| ||||||| ||||||||||| || | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  30865022 ttatttttgaatttcattctggtcccataactttaaaccgtctcaatttggtcccataactttacctccgtttacctaagtggtccctt 30865110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 255
Target Start/End: Original strand, 21553605 - 21553692
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccct 255  Q
    ||||||||||||||||||||| || ||||||||||||| || | |||||||| |||||| |||||||||||||| |||||||||||||    
T  21553605 ttatttttgaatttcattttgatcgcttaactttaaaccgtctcaatttggtcccataactttacctccgtttacctaagtggtccct 21553692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 4675769 - 4675863
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||| |||||||||||||||||||||| ||| | |||||||| |||||| |||||||||| ||| ||||||| ||||||    
T  4675769 cttaacttatttttgaattttattttggtcccttaactttaaattgtctcaatttggtcccataactttacctccgcttacctaagtgatccctt 4675863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 15989021 - 15989115
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||| ||||||||||||||||||||||||||||| || | |||||||| |||||| ||| |||||||||| ||||||| ||||||    
T  15989021 cttaacttatttttaaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttgcctccgtttacctaagtgatccctt 15989115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 29441633 - 29441727
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||| | |||||  | |||||| |||||||||||||| |||| |||||||||    
T  29441633 cttaacttatttttgaattttattttggtcccttaactttaaactgtctcaatttaatcccataactttacctccgtttacctaaatggtccctt 29441727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 21552143 - 21552054
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||| ||||||||||||||||||||||| || | |||||| | |||||| ||||||| |||||| ||||||||||||||    
T  21552143 cttatttttgaattttattttggtcccttaactttaaaccgtctcaatttgatcccataactttacctacgtttacctaagtggtccctt 21552054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 21553189 - 21553100
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||| ||||||||||||||||||||||| || | |||||| | |||||| ||||||| |||||| ||||||||||||||    
T  21553189 cttatttttgaattttattttggtcccttaactttaaaccgtctcaatttgatcccataactttacctacgtttacctaagtggtccctt 21553100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 21553802 - 21553713
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||||||||||||||| ||||||||||  || | |||||||| |||||  |||||||||||||| ||||||||||||||    
T  21553802 cttatttttgaatttcattttggtcccataactttaaatcgtctcaatttggtcccatatctttacctccgtttacctaagtggtccctt 21553713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 3271915 - 3272009
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||| |||||||| ||||||| || | |||||||| |||||| ||| |||||||||| ||||||| ||||||    
T  3271915 cttaacttatttttgaatttcattttgatcccttaattttaaaccgtctcaatttggtcccataactttgcctccgtttacctaagtgatccctt 3272009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 40102444 - 40102350
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||| ||||||||||||||||  | | ||||| || |||||| ||| |||||||||| ||||||||||||||    
T  40102444 cttagcttatttttgaatttcattttgatcccttaactttaaaccatctcaatttagtcccataactttgcctccgtttacctaagtggtccctt 40102350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 256
Target Start/End: Complemental strand, 3271379 - 3271291
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||||||||||||||||||| ||||||||||||| || | |||||||| | |||| |||||| ||||| | ||||||||||||||    
T  3271379 ttatttttgaatttcattttggtctcttaactttaaaccgtctcaatttggtccgataactttacccccgttcacctaagtggtccctt 3271291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 40103037 - 40102965
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacct 234  Q
    |||| ||||||||||||||||||||| ||||||||||||||||| || | |||||||| |||||| |||||||    
T  40103037 cttaacttatttttgaatttcattttagtcccttaactttaaaccgtctcaatttggtcccataactttacct 40102965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 252
Target Start/End: Complemental strand, 41178769 - 41178679
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||| | |||||| | || ||| | |||||||||||||| || |||||    
T  41178769 cttaacttatttttgaatttcaatttggtcccctaactttaaactgtctcaatttgctcccgtaagtatacctccgtttatccaactggtc 41178679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 250
Target Start/End: Complemental strand, 8502373 - 8502285
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtgg 250  Q
    |||| ||||||||||||||||| ||||||||| |||||||||||||| | ||||| || || ||| | |||||||||||| | ||||||    
T  8502373 cttaacttatttttgaatttcaatttggtcccctaactttaaactgtctcaattttgtcccctaagtatacctccgtttacccaagtgg 8502285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 14433645 - 14433729
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    |||||||||||||||| ||||||||| |||||||||||||| | |||||||| || ||| | |||||| ||||||| || |||||    
T  14433645 ttatttttgaatttcaatttggtcccctaactttaaactgtctcaatttggtcccctaagtatacctctgtttatccaactggtc 14433729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 205
Target Start/End: Complemental strand, 39349538 - 39349495
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaac 205  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  39349538 cttaacttatttttgaatttcattttggtcccttaactttaaac 39349495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 256
Target Start/End: Original strand, 40102238 - 40102331
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| |||||||||||||||||||||||||| ||||||||||||  | | |||||||| |||||| |||  || |||||| |||| |||||||||    
T  40102238 cttaacttatttttgaatttcattttggtcctttaactttaaaccatctcaatttggtcccataactttgtcttcgtttacctaa-tggtccctt 40102331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 241
Target Start/End: Complemental strand, 14433905 - 14433832
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    |||||||||||||| | ||||||||| |||||||||||||| | |||||||| || ||| | ||||||||||||    
T  14433905 ttatttttgaattttaatttggtcccctaactttaaactgtctcaatttggtcccctaagtatacctccgttta 14433832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 8502106 - 8502190
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtc 252  Q
    |||||||||||||||| |||| |||  |||||||||||||| | |||||||| || ||| | |||||||||||||| || |||||    
T  8502106 ttatttttgaatttcaatttgctcctctaactttaaactgtctcaatttggtcccctaagtatacctccgtttatccaactggtc 8502190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 24706311 - 24706254
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| |||||||||| |||||||||||||| |||||||||||| ||| |||| |||||    
T  24706311 cttaacttatttttggatttcattttggtctcttaactttaaattgtcttaaattggt 24706254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 3237435 - 3237498
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| |||||||||| ||||||||| |||||| |||||||||||||| | |||||||| ||||||    
T  3237435 cttaacttatttttggatttcattt-ggtcccctaactttaaactgtctcaatttggtcccataa 3237498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 19913509 - 19913573
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| ||||||||||||||||| ||||||||  ||||| |||| ||||| |||||||| ||||||    
T  19913509 cttaacttatttttgaatttcaatttggtcctctaactataaagtgtttcaatttggtcccataa 19913573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 41866911 - 41866975
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| ||||||||||| ||||| |||| |||||||||| |||| ||||| |||||||| ||||||    
T  41866911 cttaacttatttttgattttcactttgatcccttaactataaagtgtttcaatttggtcccataa 41866975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 226
Target Start/End: Complemental strand, 13367132 - 13367085
Alignment:
Q  179 tttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    ||||| ||||||||||||||| |||| |||||||||||||| ||||||    
T  13367132 tttcactttggtcccttaactataaagtgttttaatttggtcccataa 13367085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 24068347 - 24068426
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    |||| ||||||||||  ||||||||||||||| ||||| |||| ||| | |||||||| |||||| | | ||||||||||    
T  24068347 cttaacttatttttggttttcattttggtcccctaactataaagtgtctcaatttggtcccataagtcttcctccgttta 24068426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 204
Target Start/End: Original strand, 7561816 - 7561858
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaa 204  Q
    |||| |||||||||| |||||| ||||||||||||||||||||    
T  7561816 cttaacttatttttggatttcaatttggtcccttaactttaaa 7561858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 241
Target Start/End: Original strand, 33510219 - 33510289
Alignment:
Q  171 tttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    ||||||||||||| ||||||||  |||||||||||||| | |||||||| |  ||| | ||||||||||||    
T  33510219 tttttgaatttcaatttggtcctctaactttaaactgtctcaatttggtcctctaagtatacctccgttta 33510289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 39286 - 39245
Alignment:
Q  178 atttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||||| ||||||||| |||||||||||||||| ||||||||    
T  39286 atttcaatttggtcccctaactttaaactgtttcaatttggt 39245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 4881162 - 4881199
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaact 199  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  4881162 cttaacttatttttgagtttcattttggtcccttaact 4881199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 241
Target Start/End: Complemental strand, 36022521 - 36022460
Alignment:
Q  180 ttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    |||||||||||||||||||||||||| || | |||||| |  ||||| |||||||| |||||    
T  36022521 ttcattttggtcccttaactttaaaccgtctcaatttgatctcataactttacctctgttta 36022460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 206
Target Start/End: Complemental strand, 3237739 - 3237695
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaact 206  Q
    |||| |||||||||| |||||||||| ||||| ||||||||||||    
T  3237739 cttaacttatttttggatttcattttagtcccctaactttaaact 3237695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 38591106 - 38591042
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| ||||||||||| ||||| ||||||||| ||||| |||| ||| | |||||||| ||||||    
T  38591106 cttaacttatttttgattttcaatttggtcccctaactataaagtgtctcaatttggtcccataa 38591042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 1876 - 1965
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||||||||||||||||||||||||||| || | |||||||| ||| || |||||||||||||| ||||||||||||||    
T  1876 cttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccaaaactttacctccgtttacctaagtggtccctt 1965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 167 - 253
Target Start/End: Complemental strand, 2074 - 1988
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtcc 253  Q
    |||| ||||||||||||||||| |||||||||||||||| || | |||||||| |||||| |||||||||||||| |||||||||||    
T  2074 cttaattttgaatttcattttgatcccttaactttaaaccgtctcaatttggtcccataactttacctccgtttacctaagtggtcc 1988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 62; Significance: 8e-27; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 28154 - 28243
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||||||||||||||||||||||||||  || | |||||||| |||||| |||||||||||||| ||||||||||||||    
T  28154 cttatttttgaatttcattttggtcccttaactttaaaacgtctcaatttggtcccataactttacctccgtttacctaagtggtccctt 28243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 167 - 256
Target Start/End: Original strand, 28775 - 28864
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    ||||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| ||||| |||||||| ||||||||||||||    
T  28775 cttatttttgaatttcattttggtcccttaactttaaaccgtctcaatttggtcccataactttacatccgtttacctaagtggtccctt 28864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 28352 - 28263
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||||||||||||||||||||| |||||||||||||||  || | ||||||||  ||||| | |||||| ||||| ||||||||||||||    
T  28352 cttatttttgaatttcattttgatcccttaactttaaatcgtctcaatttggtctcataactctacctctgtttacctaagtggtccctt 28263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 3146 - 3094
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  3146 cttatttttgaatttcattttggtcccttaactttaaactgtctcaatttggt 3094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 2032 - 2084
Alignment:
Q  167 cttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||||||||  ||||||||||||||||||||||||||| ||| | ||||||||    
T  2032 cttatttttagatttcattttggtcccttaactttaaattgtctcaatttggt 2084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 47087 - 47151
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| |||||||||||||||||||||| ||||||||||||||| ||| | |||||||| ||||||    
T  47087 cttaacttatttttgaatttcattttgatcccttaactttaaattgtctcaatttggtcccataa 47151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 48555 - 48491
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| |||||||||| ||||||||||||||| |||||| |||| ||| | |||||| | ||||||    
T  48555 cttaacttatttttggatttcattttggtcctttaactataaagtgtctcaatttgatcccataa 48491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 256
Target Start/End: Complemental strand, 224 - 130
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttatctaagtggtccctt 256  Q
    |||| ||||||||| ||||| |||||| |||||||| ||||||| || | ||||||||  ||||| ||| |||| ||||| ||||||||||||||    
T  224 cttaacttatttttaaatttaattttgatcccttaattttaaaccgtctcaatttggtcgcataactttgcctctgtttacctaagtggtccctt 130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 42 - 115
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctc 235  Q
    |||| |||||||||||||||||||||| |||||||| ||||||| || | |||||||| |||||| ||| ||||    
T  42 cttaacttatttttgaatttcattttgatcccttaattttaaaccgtctcaatttggtcccataactttgcctc 115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 20414 - 20487
Alignment:
Q  168 ttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    |||||||||||||||| ||||||||  |||||||||||||| | |||||||| || ||| | ||| ||||||||    
T  20414 ttatttttgaatttcaatttggtcctctaactttaaactgtctcaatttggtcccctaagtatacttccgttta 20487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 20674 - 20601
Alignment:
Q  169 tatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataattttacctccgtttat 242  Q
    ||||||||||||| | |||||| || |||||||||||||| | |||||||| || ||| | || ||||||||||    
T  20674 tatttttgaattttaatttggttccctaactttaaactgtctcaatttggtcccctaagtatatctccgtttat 20601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0649 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0649
Description:

Target: scaffold0649; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 3987 - 3931
Alignment:
Q  185 tttggtcccttaactttaaactgttttaatttggttccataattttacctccgttta 241  Q
    |||||||||||||||||||| ||| | |||||||| || ||||| ||||||||||||    
T  3987 tttggtcccttaactttaaattgtctcaatttggtcccttaattatacctccgttta 3931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 25939 - 25996
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggt 219  Q
    |||| |||||||| |||||||||||||||||| ||||| |||| ||| | ||||||||    
T  25939 cttaacttattttcgaatttcattttggtcccctaactataaagtgtctcaatttggt 25996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 2364 - 2300
Alignment:
Q  162 cttatcttatttttgaatttcattttggtcccttaactttaaactgttttaatttggttccataa 226  Q
    |||| ||||||||||  ||||||||||||||| ||| | |||| ||||| |||||||| ||||||    
T  2364 cttaacttatttttggttttcattttggtcccctaattataaagtgtttcaatttggtcccataa 2300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University