View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8797_low_4 (Length: 300)
Name: NF8797_low_4
Description: NF8797
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8797_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 19 - 294
Target Start/End: Original strand, 36681803 - 36682077
Alignment:
| Q |
19 |
ttgcattcacgagaaaatctgcaagtttaggggtaatgtttttgtgtgttatattaagattacctcaaaacaattgatccattttcgcgtttgattcgtg |
118 |
Q |
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| T |
36681803 |
ttgcattcacgagaaaatctgcaagtttaggggtaatgtttttgtgtgttatattaagattacctcaaaacaattgatccattt-cgcgtttgattcgtg |
36681901 |
T |
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| Q |
119 |
cttttggagtagaaattcggaattaaattcatgttcatgcgttcatttgtgtttttacaagttcatgataattctttatttatgttttatgatgatttgt |
218 |
Q |
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| T |
36681902 |
cttttggagtagaaattcgaaattaaattcatgttcatgcgttcatttgtgtttttacaagttcatgataattctttatttatgttttatgatgatttgt |
36682001 |
T |
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| Q |
219 |
atgttttgatgatgaatcaattcagttttcgtattttattctttactggtttcgtgtttttctgcatctctgcttc |
294 |
Q |
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| T |
36682002 |
atgttttgatgatgaatcaattcagttttcgtattttattctttactggtttcgtgtttttctacatctttgcttc |
36682077 |
T |
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