View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8798_low_4 (Length: 398)

Name: NF8798_low_4
Description: NF8798
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8798_low_4
NF8798_low_4
[»] chr2 (45 HSPs)
chr2 (170-296)||(42849439-42849565)
chr2 (166-296)||(42848705-42848836)
chr2 (170-285)||(39629455-39629570)
chr2 (166-285)||(13327744-13327863)
chr2 (166-282)||(13328748-13328864)
chr2 (170-293)||(122895-123018)
chr2 (173-296)||(8911780-8911903)
chr2 (167-286)||(44926640-44926760)
chr2 (177-287)||(38273549-38273659)
chr2 (166-246)||(2477893-2477973)
chr2 (171-294)||(19386861-19386983)
chr2 (167-296)||(19386283-19386413)
chr2 (166-246)||(2477242-2477322)
chr2 (173-285)||(20202650-20202762)
chr2 (167-287)||(4776245-4776365)
chr2 (173-296)||(8911154-8911277)
chr2 (173-296)||(20203243-20203367)
chr2 (167-278)||(121311-121422)
chr2 (166-225)||(39628797-39628856)
chr2 (226-296)||(863958-864028)
chr2 (226-296)||(8043796-8043866)
chr2 (240-285)||(4776987-4777032)
chr2 (20-75)||(42848926-42848981)
chr2 (226-296)||(38985979-38986049)
chr2 (235-296)||(2055086-2055147)
chr2 (235-296)||(24433373-24433434)
chr2 (235-296)||(34452239-34452300)
chr2 (236-296)||(37876155-37876215)
chr2 (167-239)||(44929066-44929138)
chr2 (20-75)||(2477750-2477805)
chr2 (20-75)||(39628947-39629002)
chr2 (235-296)||(863194-863256)
chr2 (20-74)||(13327956-13328009)
chr2 (226-296)||(36151093-36151163)
chr2 (235-296)||(27060018-27060079)
chr2 (240-296)||(19911137-19911193)
chr2 (236-295)||(34453012-34453072)
chr2 (20-75)||(13328599-13328653)
chr2 (226-295)||(2054344-2054414)
chr2 (235-296)||(24429606-24429668)
chr2 (235-296)||(27059164-27059226)
chr2 (241-296)||(2868667-2868723)
chr2 (20-71)||(2477420-2477470)
chr2 (226-281)||(36150340-36150395)
chr2 (263-296)||(2477965-2477998)
[»] chr8 (37 HSPs)
chr8 (166-388)||(29361709-29361933)
chr8 (166-290)||(5330889-5331013)
chr8 (166-296)||(5332110-5332240)
chr8 (166-286)||(42986645-42986765)
chr8 (166-268)||(29267794-29267896)
chr8 (167-296)||(39861589-39861719)
chr8 (167-276)||(36732022-36732131)
chr8 (170-296)||(5881132-5881247)
chr8 (166-285)||(42987414-42987532)
chr8 (167-277)||(29266170-29266280)
chr8 (173-289)||(17450522-17450638)
chr8 (168-296)||(25128575-25128703)
chr8 (167-256)||(37437926-37438013)
chr8 (235-296)||(3583296-3583357)
chr8 (223-285)||(39131022-39131084)
chr8 (235-296)||(3583647-3583708)
chr8 (238-296)||(20054258-20054316)
chr8 (235-296)||(10092908-10092969)
chr8 (20-75)||(5331101-5331156)
chr8 (226-288)||(16846810-16846872)
chr8 (235-296)||(16847678-16847740)
chr8 (235-296)||(29267932-29267994)
chr8 (235-296)||(29268820-29268881)
chr8 (226-295)||(34654192-34654261)
chr8 (167-279)||(5882349-5882461)
chr8 (223-282)||(25129349-25129408)
chr8 (25-75)||(29267658-29267708)
chr8 (235-296)||(10093537-10093598)
chr8 (263-296)||(29267908-29267941)
chr8 (252-296)||(34654941-34654986)
chr8 (20-71)||(5331963-5332013)
chr8 (173-204)||(39861043-39861074)
chr8 (20-75)||(42987284-42987339)
chr8 (235-296)||(3582420-3582482)
chr8 (235-296)||(14754163-14754222)
chr8 (235-296)||(24023027-24023089)
chr8 (20-70)||(29266380-29266429)
[»] chr7 (50 HSPs)
chr7 (166-297)||(38059835-38059966)
chr7 (166-296)||(8513400-8513530)
chr7 (166-298)||(8487745-8487877)
chr7 (166-297)||(8487016-8487148)
chr7 (166-296)||(8512692-8512823)
chr7 (166-296)||(31178630-31178759)
chr7 (173-296)||(31179863-31179985)
chr7 (171-296)||(3162858-3162982)
chr7 (167-294)||(46428056-46428183)
chr7 (167-296)||(43334664-43334794)
chr7 (170-296)||(3163438-3163565)
chr7 (173-296)||(30659844-30659967)
chr7 (171-296)||(30469500-30469625)
chr7 (167-281)||(43742724-43742838)
chr7 (167-286)||(3474901-3475020)
chr7 (167-286)||(3475508-3475627)
chr7 (166-274)||(25245598-25245706)
chr7 (175-296)||(43334119-43334239)
chr7 (167-283)||(26773996-26774112)
chr7 (166-246)||(28451163-28451243)
chr7 (173-286)||(37422558-37422671)
chr7 (167-271)||(30470038-30470142)
chr7 (235-296)||(21415400-21415461)
chr7 (166-285)||(21865566-21865685)
chr7 (173-296)||(30660452-30660574)
chr7 (179-296)||(26774620-26774737)
chr7 (20-75)||(8487598-8487653)
chr7 (167-255)||(21866321-21866409)
chr7 (226-296)||(32022658-32022728)
chr7 (235-296)||(3219294-3219354)
chr7 (235-296)||(36784519-36784580)
chr7 (235-296)||(42489977-42490038)
chr7 (226-296)||(32021210-32021281)
chr7 (235-296)||(30471011-30471071)
chr7 (235-296)||(43065834-43065895)
chr7 (235-278)||(4962374-4962418)
chr7 (167-251)||(38816720-38816804)
chr7 (226-285)||(24306349-24306408)
chr7 (226-296)||(30001791-30001862)
chr7 (226-296)||(30469434-30469505)
chr7 (25-74)||(38060059-38060107)
chr7 (236-296)||(21414705-21414764)
chr7 (235-281)||(30468697-30468743)
chr7 (235-296)||(37706327-37706389)
chr7 (235-285)||(42489214-42489264)
chr7 (236-277)||(26076900-26076941)
chr7 (236-277)||(26100687-26100728)
chr7 (263-296)||(28451138-28451171)
chr7 (235-296)||(30002563-30002624)
chr7 (236-296)||(36783747-36783808)
[»] chr5 (31 HSPs)
chr5 (166-294)||(21145927-21146055)
chr5 (166-296)||(23206131-23206261)
chr5 (166-296)||(42521628-42521759)
chr5 (166-296)||(21148034-21148165)
chr5 (166-296)||(42520606-42520736)
chr5 (170-284)||(42520372-42520486)
chr5 (167-278)||(42519647-42519758)
chr5 (167-274)||(31219927-31220034)
chr5 (235-296)||(11768830-11768892)
chr5 (226-296)||(14480738-14480808)
chr5 (167-256)||(31218724-31218813)
chr5 (226-296)||(492132-492203)
chr5 (226-296)||(3259060-3259131)
chr5 (226-296)||(14481456-14481527)
chr5 (20-75)||(21146143-21146198)
chr5 (20-75)||(23205984-23206038)
chr5 (226-296)||(4737034-4737104)
chr5 (226-286)||(10394104-10394164)
chr5 (236-296)||(36038591-36038651)
chr5 (226-285)||(9917729-9917788)
chr5 (226-285)||(15915811-15915870)
chr5 (20-75)||(42521483-42521537)
chr5 (235-296)||(3259813-3259875)
chr5 (226-296)||(15883155-15883225)
chr5 (20-74)||(42520824-42520878)
chr5 (237-278)||(20589396-20589437)
chr5 (235-286)||(10394869-10394920)
chr5 (20-71)||(21147889-21147939)
chr5 (235-281)||(15915088-15915134)
chr5 (235-281)||(25836615-25836661)
chr5 (226-278)||(25835861-25835913)
[»] chr4 (41 HSPs)
chr4 (166-296)||(45919500-45919630)
chr4 (166-285)||(41696057-41696176)
chr4 (166-286)||(46619564-46619684)
chr4 (166-286)||(41695383-41695503)
chr4 (166-271)||(45920224-45920329)
chr4 (173-296)||(42058475-42058598)
chr4 (167-285)||(4158549-4158667)
chr4 (167-296)||(21825085-21825214)
chr4 (170-282)||(31915167-31915278)
chr4 (171-296)||(21824545-21824670)
chr4 (166-289)||(46618350-46618469)
chr4 (166-285)||(29212008-29212113)
chr4 (167-285)||(42882748-42882866)
chr4 (182-289)||(4157776-4157882)
chr4 (170-282)||(24377890-24378002)
chr4 (235-296)||(6784830-6784891)
chr4 (246-296)||(550336-550386)
chr4 (226-296)||(42418974-42419044)
chr4 (235-296)||(13387775-13387836)
chr4 (235-296)||(19549451-19549512)
chr4 (236-296)||(12834408-12834468)
chr4 (20-75)||(41695595-41695650)
chr4 (20-75)||(45919719-45919774)
chr4 (235-285)||(4900136-4900186)
chr4 (235-296)||(36855671-36855733)
chr4 (235-296)||(42419715-42419777)
chr4 (21-74)||(46619423-46619475)
chr4 (235-282)||(4899415-4899463)
chr4 (226-285)||(19550222-19550281)
chr4 (226-296)||(25478064-25478135)
chr4 (235-296)||(12835181-12835243)
chr4 (25-75)||(46618556-46618606)
chr4 (235-293)||(50696931-50696989)
chr4 (223-289)||(52362734-52362800)
chr4 (236-296)||(25236377-25236437)
chr4 (237-292)||(13767483-13767538)
chr4 (244-286)||(24534795-24534837)
chr4 (167-217)||(42883406-42883456)
chr4 (253-295)||(42883472-42883513)
chr4 (235-296)||(25478803-25478864)
chr4 (235-296)||(36854898-36854959)
[»] chr3 (51 HSPs)
chr3 (170-296)||(20200549-20200675)
chr3 (170-296)||(20202733-20202859)
chr3 (166-296)||(53950014-53950144)
chr3 (166-296)||(47169094-47169223)
chr3 (166-295)||(47167877-47168006)
chr3 (173-296)||(11238504-11238628)
chr3 (166-295)||(20199857-20199984)
chr3 (166-252)||(53949371-53949457)
chr3 (167-296)||(43400706-43400835)
chr3 (167-296)||(51827551-51827680)
chr3 (173-294)||(53948651-53948772)
chr3 (173-284)||(53949257-53949368)
chr3 (167-285)||(41710134-41710252)
chr3 (167-283)||(53948510-53948626)
chr3 (223-296)||(30833670-30833743)
chr3 (166-256)||(20202084-20202172)
chr3 (173-296)||(38798241-38798364)
chr3 (170-279)||(28907892-28908001)
chr3 (20-75)||(53949550-53949605)
chr3 (167-285)||(28908588-28908706)
chr3 (223-296)||(30834425-30834497)
chr3 (167-255)||(24485893-24485981)
chr3 (235-294)||(11239893-11239952)
chr3 (235-296)||(22259569-22259631)
chr3 (235-296)||(46889271-46889332)
chr3 (239-296)||(54584218-54584275)
chr3 (20-75)||(20200077-20200132)
chr3 (20-75)||(20202261-20202316)
chr3 (167-262)||(41709542-41709637)
chr3 (226-296)||(46915722-46915793)
chr3 (226-296)||(7253263-7253332)
chr3 (226-296)||(50801822-50801892)
chr3 (226-296)||(50873988-50874058)
chr3 (235-296)||(54584885-54584947)
chr3 (236-296)||(16302621-16302682)
chr3 (235-296)||(16303394-16303455)
chr3 (235-295)||(46914962-46915021)
chr3 (236-283)||(11238864-11238911)
chr3 (226-285)||(37987168-37987227)
chr3 (226-283)||(46888478-46888535)
chr3 (25-74)||(47168955-47169003)
chr3 (235-295)||(50802594-50802653)
chr3 (235-295)||(50873224-50873283)
chr3 (235-293)||(5531952-5532010)
chr3 (25-68)||(47168097-47168140)
chr3 (235-285)||(16854648-16854698)
chr3 (170-200)||(51829426-51829456)
chr3 (167-200)||(30834369-30834402)
chr3 (235-284)||(37986415-37986464)
chr3 (223-260)||(53948420-53948457)
chr3 (226-282)||(13644117-13644173)
[»] chr1 (61 HSPs)
chr1 (170-296)||(5496534-5496660)
chr1 (166-290)||(39848814-39848938)
chr1 (166-286)||(7012972-7013092)
chr1 (166-285)||(47374780-47374899)
chr1 (166-296)||(42987019-42987149)
chr1 (167-296)||(21790739-21790868)
chr1 (166-286)||(7011963-7012083)
chr1 (166-296)||(39847798-39847926)
chr1 (167-296)||(14886141-14886270)
chr1 (166-295)||(10716862-10716999)
chr1 (167-296)||(16960064-16960194)
chr1 (178-296)||(29858911-29859029)
chr1 (171-287)||(14886771-14886887)
chr1 (167-278)||(47052351-47052462)
chr1 (167-296)||(2271272-2271401)
chr1 (171-296)||(16959492-16959616)
chr1 (167-295)||(46284743-46284872)
chr1 (193-296)||(26212906-26213010)
chr1 (173-296)||(5216550-5216673)
chr1 (167-286)||(48302130-48302249)
chr1 (173-290)||(27652044-27652161)
chr1 (166-258)||(10716698-10716790)
chr1 (173-297)||(21791425-21791548)
chr1 (167-283)||(42986758-42986874)
chr1 (223-291)||(46285540-46285608)
chr1 (166-246)||(47374083-47374163)
chr1 (222-296)||(5497280-5497355)
chr1 (167-296)||(26897072-26897201)
chr1 (177-296)||(27651320-27651440)
chr1 (246-296)||(17606252-17606302)
chr1 (235-296)||(26213602-26213663)
chr1 (20-75)||(5497110-5497165)
chr1 (226-296)||(16317541-16317611)
chr1 (226-296)||(31150667-31150737)
chr1 (235-296)||(48644836-48644897)
chr1 (170-246)||(51445507-51445583)
chr1 (20-75)||(7012176-7012230)
chr1 (226-296)||(23602434-23602505)
chr1 (20-75)||(39848670-39848724)
chr1 (20-75)||(47374636-47374691)
chr1 (20-74)||(7012826-7012879)
chr1 (235-285)||(24081454-24081504)
chr1 (167-217)||(26896536-26896586)
chr1 (167-261)||(44233231-44233325)
chr1 (226-295)||(48577552-48577622)
chr1 (235-296)||(4595581-4595642)
chr1 (235-296)||(39870052-39870113)
chr1 (167-286)||(48301866-48301984)
chr1 (20-74)||(39848014-39848068)
chr1 (235-296)||(39870816-39870878)
chr1 (235-285)||(40959777-40959827)
chr1 (236-285)||(4594706-4594755)
chr1 (167-204)||(29859602-29859639)
chr1 (235-296)||(51661362-51661422)
chr1 (226-281)||(23601740-23601795)
chr1 (234-285)||(40958887-40958938)
chr1 (226-296)||(51660592-51660663)
chr1 (235-281)||(23174045-23174091)
chr1 (167-200)||(6690385-6690418)
chr1 (235-284)||(31151439-31151488)
chr1 (167-200)||(46285484-46285517)
[»] scaffold0009 (3 HSPs)
scaffold0009 (166-296)||(106226-106356)
scaffold0009 (166-297)||(105497-105629)
scaffold0009 (20-75)||(105722-105777)
[»] scaffold0188 (2 HSPs)
scaffold0188 (166-296)||(25603-25733)
scaffold0188 (20-75)||(25826-25881)
[»] scaffold0853 (4 HSPs)
scaffold0853 (178-296)||(603-722)
scaffold0853 (166-220)||(2261-2315)
scaffold0853 (20-75)||(822-876)
scaffold0853 (20-75)||(2118-2173)
[»] chr6 (20 HSPs)
chr6 (167-296)||(8992896-8993025)
chr6 (167-296)||(9017343-9017472)
chr6 (173-285)||(18153258-18153370)
chr6 (167-296)||(19653802-19653932)
chr6 (173-295)||(18649842-18649964)
chr6 (175-288)||(19651068-19651181)
chr6 (167-296)||(8993522-8993650)
chr6 (167-296)||(9017969-9018097)
chr6 (173-288)||(32907424-32907539)
chr6 (167-283)||(9280830-9280946)
chr6 (226-296)||(18969100-18969170)
chr6 (226-292)||(35073407-35073473)
chr6 (235-296)||(1371058-1371119)
chr6 (252-296)||(18154450-18154494)
chr6 (235-296)||(1370147-1370209)
chr6 (235-296)||(19820872-19820934)
chr6 (235-297)||(35072744-35072805)
chr6 (235-295)||(18969855-18969916)
chr6 (226-281)||(24063774-24063829)
chr6 (167-217)||(18154401-18154451)
[»] scaffold0301 (1 HSPs)
scaffold0301 (166-296)||(20718-20847)
[»] scaffold0155 (1 HSPs)
scaffold0155 (171-296)||(986-1112)
[»] scaffold0096 (1 HSPs)
scaffold0096 (235-296)||(39831-39892)
[»] scaffold0093 (3 HSPs)
scaffold0093 (235-296)||(21944-22005)
scaffold0093 (235-296)||(22836-22897)
scaffold0093 (236-296)||(22774-22835)
[»] scaffold0050 (1 HSPs)
scaffold0050 (226-296)||(8399-8470)
[»] scaffold1339 (1 HSPs)
scaffold1339 (226-296)||(1904-1975)


Alignment Details
Target: chr2 (Bit Score: 119; Significance: 1e-60; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 170 - 296
Target Start/End: Original strand, 42849439 - 42849565
Alignment:
Q  170 atcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgt 269  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42849439 atcaagcatgtgagcacttaatgaattgatgggagccgttagattaaaaccgtattaatggctaggatttggtgtcaaatttaatttgacaccttggtgt 42849538  T
Q  270 catttgatcctatccctatatatatat 296  Q
    |||||||||||||||||||||||||||    
T  42849539 catttgatcctatccctatatatatat 42849565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 42848836 - 42848705
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    ||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  42848836 cttgatcaagcatgtgaacacttaatgaattgatgggagtcgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacacctta 42848737  T
Q  266 gtgtcatttgatcctatccc-tatatatatat 296  Q
     ||||||||||||||||||| |||||||||||    
T  42848736 ttgtcatttgatcctatcccatatatatatat 42848705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 170 - 285
Target Start/End: Original strand, 39629455 - 39629570
Alignment:
Q  170 atcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgt 269  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  39629455 atcaagcatgtgagcacttaatgaattgatgagagccgttagattaaaactgtattaatggctagaatttggtgtcaaatttaatttgacaccttggtgt 39629554  T
Q  270 catttgatcctatccc 285  Q
    ||||||||| ||||||    
T  39629555 catttgatcatatccc 39629570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 166 - 285
Target Start/End: Complemental strand, 13327863 - 13327744
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||  | ||||| || || |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||    
T  13327863 cttgatcaagcatgtgagcgctcaatgagtttatcggagccgttagattaaaaccgtattaatggttaggatttggtgtcaaatttaatttaacaccttg 13327764  T
Q  266 gtgtcatttgatcctatccc 285  Q
    ||||||||||||| ||||||    
T  13327763 gtgtcatttgatcttatccc 13327744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 166 - 282
Target Start/End: Original strand, 13328748 - 13328864
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||| ||||| | || |||| || |||||||||||| || ||||||||||||| ||||||||||||||||||||| |||||||     
T  13328748 cttgatcaagcatgtgagcacttaataagtttatggaagtcgttagattaaacccgtattaatggctagaatttggtgtcaaatttaatttaacacctta 13328847  T
Q  266 gtgtcatttgatcctat 282  Q
    |||||||||||||||||    
T  13328848 gtgtcatttgatcctat 13328864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 170 - 293
Target Start/End: Original strand, 122895 - 123018
Alignment:
Q  170 atcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgt 269  Q
    |||||| |||||||||||||||||||||||| ||| |||| ||||||      |||||||| ||| ||||||||||||||||||||||||||||||||||    
T  122895 atcaagtatgtgagcatttaatgaattgatgagagacgttggattaatgttgaattaatggttagaatttggtgtcaaatttaatttgacaccttggtgt 122994  T
Q  270 catttgatcctatccctatatata 293  Q
    |||||||||||||||| |||||||    
T  122995 catttgatcctatcccaatatata 123018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 173 - 296
Target Start/End: Original strand, 8911780 - 8911903
Alignment:
Q  173 aagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcat 272  Q
    ||||||||||||||||||||||||||||| |  |||  |||||||     |||||||| || |||||||||||||||||||||||||||| |||||||||    
T  8911780 aagcatgtgagcatttaatgaattgatggaaaacgtcggattaaagttgaattaatggttatgatttggtgtcaaatttaatttgacaccatggtgtcat 8911879  T
Q  273 ttgatcctatccctatatatatat 296  Q
    ||||||||||||||||||||||||    
T  8911880 ttgatcctatccctatatatatat 8911903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 44926760 - 44926640
Alignment:
Q  167 ttgatcaagcatgtgagca-tttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    ||||||||| ||||||||| |||||||||||||| ||| |||||| ||||||||  ||||||||| ||||||||| ||| ||||||||||||||||||||    
T  44926760 ttgatcaagtatgtgagcactttaatgaattgattggaaccgttaaattaaaactgtattaatgggtaggatttgatgtaaaatttaatttgacaccttg 44926661  T
Q  266 gtgtcatttgatcctatccct 286  Q
     |||||||||||| |||||||    
T  44926660 atgtcatttgatcatatccct 44926640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 177 - 287
Target Start/End: Complemental strand, 38273659 - 38273549
Alignment:
Q  177 atgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttga 276  Q
    ||||||||| |||  ||||||||  |||||||| ||||||||| |||||||||| || ||||||||||||||||| ||||||||||||||||| ||||||    
T  38273659 atgtgagcacttatagaattgattagagccgttggattaaaactatattaatggataagatttggtgtcaaattttatttgacaccttggtgttatttga 38273560  T
Q  277 tcctatcccta 287  Q
    |||||||||||    
T  38273559 tcctatcccta 38273549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 2477893 - 2477973
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtca 246  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2477893 cttgatcaagcatgtgagcacttaatgagtttatgggagccgttagattaaaaccgtattaatggctaggatttggtgtca 2477973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 171 - 294
Target Start/End: Original strand, 19386861 - 19386983
Alignment:
Q  171 tcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtc 270  Q
    |||||||| |||||||||||||| |||||| ||| ||| ||||||||     |||||||| |||||||| |||||||||||||||||| ||||||||||     
T  19386861 tcaagcatatgagcatttaatgatttgatgagagacgtcagattaaagtgg-attaatggttaggatttagtgtcaaatttaatttgataccttggtgta 19386959  T
Q  271 atttgatcctatccctatatatat 294  Q
    ||||||||||||||||||||||||    
T  19386960 atttgatcctatccctatatatat 19386983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 167 - 296
Target Start/End: Complemental strand, 19386413 - 19386283
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    |||||||||||||||||||||||||||||||||   ||  ||| |||||||     |||||||| || |||||||||||||||||||||||||||| |||    
T  19386413 ttgatcaagcatgtgagcatttaatgaattgataatagatgttggattaaagttgaattaatggttatgatttggtgtcaaatttaatttgacaccatgg 19386314  T
Q  267 tgtcatttgatcctatccc-tatatatatat 296  Q
    |||||||||||| |||||| |||||||||||    
T  19386313 tgtcatttgatcatatcccatatatatatat 19386283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 2477322 - 2477242
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtca 246  Q
    |||||||||||||||||||| ||||||| || |||| |||||||||||||||||| |||||||||||||||||||||||||    
T  2477322 cttgatcaagcatgtgagcacttaatgagtttatggaagccgttagattaaaaccgtattaatggctaggatttggtgtca 2477242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 173 - 285
Target Start/End: Complemental strand, 20202762 - 20202650
Alignment:
Q  173 aagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcat 272  Q
    |||||||||||||||||||||||||||| ||| |||  |||||||     |||||||| || ||||||||||||||||||||||||||||  ||||||||    
T  20202762 aagcatgtgagcatttaatgaattgatgagagacgtcggattaaagttgaattaatggttatgatttggtgtcaaatttaatttgacaccacggtgtcat 20202663  T
Q  273 ttgatcctatccc 285  Q
    |||||||||||||    
T  20202662 ttgatcctatccc 20202650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 167 - 287
Target Start/End: Complemental strand, 4776365 - 4776245
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    |||||||||||||||||||||||||||||||||| |   |||  ||||||      |||||| | |||||||| ||||||||||||||||||||| || |    
T  4776365 ttgatcaagcatgtgagcatttaatgaattgatgagcaacgtcggattaatgttggattaattgttaggatttagtgtcaaatttaatttgacactttag 4776266  T
Q  267 tgtcatttgatcctatcccta 287  Q
    |||||||||||| ||||||||    
T  4776265 tgtcatttgatcatatcccta 4776245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 173 - 296
Target Start/End: Complemental strand, 8911277 - 8911154
Alignment:
Q  173 aagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcat 272  Q
    ||||||||||| ||||||||| |||||| ||| |||  |||||||     |||||||| || ||||||||||||||| |||||||||||| |||||||||    
T  8911277 aagcatgtgagtatttaatga-ttgatgagagacgtcggattaaagttgaattaatggttatgatttggtgtcaaatataatttgacaccatggtgtcat 8911179  T
Q  273 ttgatcctatc-cctatatatatat 296  Q
    ||||||||||| | |||||||||||    
T  8911178 ttgatcctatctcatatatatatat 8911154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 173 - 296
Target Start/End: Original strand, 20203243 - 20203367
Alignment:
Q  173 aagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaa-tttgacaccttggtgtca 271  Q
    ||||||||||||||| ||||||||||||  |  |||  |||||||     |||||||| || ||||||||||||||||||| ||||||||| ||||||||    
T  20203243 aagcatgtgagcattcaatgaattgatgaaaaacgtcggattaaagttgaattaatggttatgatttggtgtcaaatttaaatttgacaccatggtgtca 20203342  T
Q  272 tttgatcctatccctatatatatat 296  Q
    ||||||||||||||  |||||||||    
T  20203343 tttgatcctatcccattatatatat 20203367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 167 - 278
Target Start/End: Complemental strand, 121422 - 121311
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    ||||||||| || |||| |||||||||||||||| ||| |||  |||||||     |||||||| || ||||| |||||||||||||||||||||||| |    
T  121422 ttgatcaagtatttgagtatttaatgaattgatgagagacgtcggattaaagtttgattaatggttatgatttagtgtcaaatttaatttgacaccttag 121323  T
Q  267 tgtcatttgatc 278  Q
    ||||||||||||    
T  121322 tgtcatttgatc 121311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 39628856 - 39628797
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatatt 225  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||    
T  39628856 cttgatcaagcatgtgagcacttaatgaattgatggaagccgttagattaaaaccgtatt 39628797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 226 - 296
Target Start/End: Original strand, 863958 - 864028
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||| || |||||||||||||| | | ||||||||| |||||||||||||||||||||||||||||||||    
T  863958 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccctatatatatat 864028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 226 - 296
Target Start/End: Original strand, 8043796 - 8043866
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||| || |||||||||||||| | | ||||||||| |||||||||||||||||||||||||||||||||    
T  8043796 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccctatatatatat 8043866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 4776987 - 4777032
Alignment:
Q  240 ggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc 285  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  4776987 ggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc 4777032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 42848981 - 42848926
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    |||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||    
T  42848981 aataggggtaaatcctgtgcaagagagccctaagaataaacgatgtagaatccttc 42848926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 38986049 - 38985979
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||| || |||||||||||||| | | ||||||||| | |||||||||||||||||||||||||||||||    
T  38986049 aatggataagatttggtgtcaaactaattttgacaccatagtgtcatttgatcctatccctatatatatat 38985979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 2055086 - 2055147
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||| |||||||| | | ||||||||| |||||||||||||||||||||||||||||||||    
T  2055086 gattttgtgtcaaactaattttgacaccatggtgtcatttgatcctatccctatatatatat 2055147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 24433373 - 24433434
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||| | | ||||||| | |||||||||||||||||||||||||||||||||    
T  24433373 gatttggtgtcaaactaattttgacatcatggtgtcatttgatcctatccctatatatatat 24433434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 34452300 - 34452239
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||| | | ||||||||| |||||||||||||||||| ||||||||||||||    
T  34452300 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaaccctatatatatat 34452239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 37876155 - 37876215
Alignment:
Q  236 atttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||||||||||| | | ||||||||| |||||||||||||||||| ||||||||||||||    
T  37876155 atttggtgtcaaactaattttgacaccatggtgtcatttgatcctaaccctatatatatat 37876215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 167 - 239
Target Start/End: Original strand, 44929066 - 44929138
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggattt 239  Q
    ||||||||  ||||||||||||||||||||||||    ||||||||||||||  |||||||||||||||||||    
T  44929066 ttgatcaaatatgtgagcatttaatgaattgatgaacaccgttagattaaaattatattaatggctaggattt 44929138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 2477750 - 2477805
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    ||||||||||||||||||||||||||| |||||||| |||| ||||||| ||||||    
T  2477750 aataggggtaaatcatgtgcaagagagtcctaagaataaacgatgtagagtccttc 2477805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 39629002 - 39628947
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    |||||||||||||||||||||| ||| ||||||||| |||| ||||||||||||||    
T  39629002 aataggggtaaatcatgtgcaaaagaaccctaagaataaacgatgtagaatccttc 39628947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 863256 - 863194
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    |||||||||||||| | | ||||||||| |||||||||||||||||||||| |||||||||||    
T  863256 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatatatat 863194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 13328009 - 13327956
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatcctt 74  Q
    ||||||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  13328009 aataggggtaactcatgtgcaagagagccctaagaataaac-atgtagaatcctt 13327956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 226 - 296
Target Start/End: Original strand, 36151093 - 36151163
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||| || |||||||||||||| | | ||||||||| |||||||||||||||||| | ||||||||||||    
T  36151093 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaactctatatatatat 36151163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 27060018 - 27060079
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||| | | ||||||||  |||| ||||||||||||||||||||||||||||    
T  27060018 gatttggtgtcaaactaattttgacactatggtatcatttgatcctatccctatatatatat 27060079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 240 - 296
Target Start/End: Original strand, 19911137 - 19911193
Alignment:
Q  240 ggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||||||| | | ||||||||| |||||||||||||||||| ||||||||||||||    
T  19911137 ggtgtcaaactaattttgacaccatggtgtcatttgatcctaaccctatatatatat 19911193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 236 - 295
Target Start/End: Original strand, 34453012 - 34453072
Alignment:
Q  236 atttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatata 295  Q
    ||||||||||||| | | ||||||||| |||||||||||||||||||||| ||||||||||    
T  34453012 atttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatatata 34453072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 13328599 - 13328653
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    ||||||||||| ||||||||||||||| |||||||| |||| ||||||||||||||    
T  13328599 aataggggtaactcatgtgcaagagagacctaagaataaac-atgtagaatccttc 13328653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 295
Target Start/End: Complemental strand, 2054414 - 2054344
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatata 295  Q
    ||||| || ||||| |||||||| | | ||||||||| |||||||||||||||||||||| ||||||||||    
T  2054414 aatggataagatttagtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatatata 2054344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 24429668 - 24429606
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    |||||||||||||| | | ||||||||  |||||||||||||||||||||| |||||||||||    
T  24429668 gatttggtgtcaaactaattttgacacgatggtgtcatttgatcctatcccatatatatatat 24429606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 27059226 - 27059164
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    |||||||||| ||| | | ||||||||| |||||||||||||||||||||| |||||||||||    
T  27059226 gatttggtgtgaaactaattttgacaccatggtgtcatttgatcctatcccatatatatatat 27059164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 296
Target Start/End: Original strand, 2868667 - 2868723
Alignment:
Q  241 gtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    |||||||| | | ||||||||| |||||||||||||||||||||| |||||||||||    
T  2868667 gtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatatatat 2868723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 2477470 - 2477420
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatc 71  Q
    ||||||||||| |||||||||| ||||||||||||| |||| ||||||||||    
T  2477470 aataggggtaactcatgtgcaaaagagccctaagaataaac-atgtagaatc 2477420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 36150395 - 36150340
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatccta 281  Q
    ||||| || |||||||||||||| | | ||||||||| ||||||||||||||||||    
T  36150395 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatccta 36150340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 296
Target Start/End: Original strand, 2477965 - 2477998
Alignment:
Q  263 ttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||||| |||||||||||||||||    
T  2477965 ttggtgtcatttgatcatatccctatatatatat 2477998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 2e-59; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 166 - 388
Target Start/End: Complemental strand, 29361933 - 29361709
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||           |||    
T  29361933 cttgatcaagcatgttagcacttaatgaattgatgggagccgttagattaaaaccgtattaatggctaggatctggtgtcaaattt-----------ttg 29361845  T
Q  266 gtgtcatttgatcctatccctatatatatat------------tatcttta-aggaacatcatctaatatccaatcaaggtatttaatggaacagtgtta 352  Q
     |||||||||||||||||  |||||||||||            |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  29361844 atgtcatttgatcctatctatatatatatatatatatatatattatctttagaggaacatcatctaatattcaatcaaggtatttaatggaacagtgtta 29361745  T
Q  353 gctaattgtaaagagatatagtaggtttcatctcac 388  Q
    ||||||||||||||||||||||||||||||||||||    
T  29361744 gctaattgtaaagagatatagtaggtttcatctcac 29361709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 166 - 290
Target Start/End: Complemental strand, 5331013 - 5330889
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||    
T  5331013 cttgatcaagcatgtgagcacttaatgagtttatgggagccgttagattaaaaccgtattaatggctagaatttggtgtcaaatttaatttaacaccttg 5330914  T
Q  266 gtgtcatttgatcctatccctatat 290  Q
    |||||||||||||| ||||||||||    
T  5330913 gtgtcatttgatccgatccctatat 5330889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 5332110 - 5332240
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||  ||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5332110 cttgatcaagcatgtgagctcttaatgagtttatgggagccgttagattaaaaccgtattaatggctaggatttggtgtcaaatttaatttgacaccttg 5332209  T
Q  266 gtgtcatttgatcctatccctatatatatat 296  Q
    ||||||||||||||| |   |||||||||||    
T  5332210 gtgtcatttgatcctntatatatatatatat 5332240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 166 - 286
Target Start/End: Complemental strand, 42986765 - 42986645
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    ||||||||| |||| ||||| |||||||||| ||| ||||| ||| ||||||||  |||||||||||| ||||||||||||||||||||||||||| |||    
T  42986765 cttgatcaaacatgcgagcacttaatgaattaatgagagccattaaattaaaacattattaatggctatgatttggtgtcaaatttaatttgacactttg 42986666  T
Q  266 gtgtcatttgatcctatccct 286  Q
    |||||||||||||||||||||    
T  42986665 gtgtcatttgatcctatccct 42986645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 166 - 268
Target Start/End: Original strand, 29267794 - 29267896
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||| ||||||| || ||| ||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29267794 cttgatcaagcatgtgagcacttaatgagtttatgagaatcgttagattaaaaccatattaatggctaagatttggtgtcaaatttaatttgacaccttg 29267893  T
Q  266 gtg 268  Q
    |||    
T  29267894 gtg 29267896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 167 - 296
Target Start/End: Original strand, 39861589 - 39861719
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    ||||||||||| ||||| |||||||||||||||| ||| ||||||||||||     |||||||| ||||||||| ||| |||||||||||||||||||||    
T  39861589 ttgatcaagcacgtgagaatttaatgaattgatgagagacgttagattaaagttggattaatggttaggatttgatgttaaatttaatttgacaccttgg 39861688  T
Q  267 tgtcatttgatcctatccc-tatatatatat 296  Q
    ||||||||||||||||||| |||||||||||    
T  39861689 tgtcatttgatcctatcccatatatatatat 39861719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 167 - 276
Target Start/End: Original strand, 36732022 - 36732131
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    ||||||||||||||||| |||||||||||||||| ||| ||||||||||||     |||||||| || ||||||||||||||||||||||||||||||||    
T  36732022 ttgatcaagcatgtgagaatttaatgaattgatgagagacgttagattaaagttggattaatggttatgatttggtgtcaaatttaatttgacaccttgg 36732121  T
Q  267 tgtcatttga 276  Q
    ||||||||||    
T  36732122 tgtcatttga 36732131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 170 - 296
Target Start/End: Complemental strand, 5881247 - 5881132
Alignment:
Q  170 atcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgt 269  Q
    ||||||||||||||||||||||||||||||| ||| |||| ||||||           ||| ||| ||||||||||||||||||||||||||||||||||    
T  5881247 atcaagcatgtgagcatttaatgaattgatgagagacgttggattaa-----------tggttagaatttggtgtcaaatttaatttgacaccttggtgt 5881159  T
Q  270 catttgatcctatccctatatatatat 296  Q
    |||||||||||||||||||||||||||    
T  5881158 catttgatcctatccctatatatatat 5881132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 166 - 285
Target Start/End: Original strand, 42987414 - 42987532
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    ||||||||||||| |||||| |||||||||||||| || || |||||||||||| |||||||| | |||||||||||||||| ||||||||||||||  |    
T  42987414 cttgatcaagcatatgagcacttaatgaattgatgtgaacctttagattaaaactatattaatagttaggatttggtgtcaagtttaatttgacacc-cg 42987512  T
Q  266 gtgtcatttgatcctatccc 285  Q
    ||||||||||||| ||||||    
T  42987513 gtgtcatttgatcttatccc 42987532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 167 - 277
Target Start/End: Complemental strand, 29266280 - 29266170
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    |||||||||||||| |  | ||||||| || ||||||||||||||||||||| | ||||||| | ||||||||| |||||||||||||||||||||||||    
T  29266280 ttgatcaagcatgtaaatacttaatgagtttatgggagccgttagattaaaatcgtattaatagttaggatttgatgtcaaatttaatttgacaccttgg 29266181  T
Q  267 tgtcatttgat 277  Q
    |||||||||||    
T  29266180 tgtcatttgat 29266170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 173 - 289
Target Start/End: Complemental strand, 17450638 - 17450522
Alignment:
Q  173 aagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcat 272  Q
    |||||||||||||||||||||||||||| ||| |||  |||||||     |||||||| || ||||||||||||||||||||||||||||  ||||||||    
T  17450638 aagcatgtgagcatttaatgaattgatgagagacgtcggattaaagttgaattaatggttatgatttggtgtcaaatttaatttgacaccacggtgtcat 17450539  T
Q  273 ttgatcctatccctata 289  Q
    |||||||||||||||||    
T  17450538 ttgatcctatccctata 17450522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 168 - 296
Target Start/End: Complemental strand, 25128703 - 25128575
Alignment:
Q  168 tgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggt 267  Q
    |||||||| || |||  |||||||||||||||| ||| |||  |||||||     |||||||| || |||||||||||||||||||||||||||||||||    
T  25128703 tgatcaagtatttgaatatttaatgaattgatgagagacgtcggattaaagtttgattaatggttatgatttggtgtcaaatttaatttgacaccttggt 25128604  T
Q  268 gtcatttgatcctatccctatatatatat 296  Q
    ||||||||||| |||||||||||||||||    
T  25128603 gtcatttgatcttatccctatatatatat 25128575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 37438013 - 37437926
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaattt 256  Q
    ||||||||  |||||||||| ||||||||||||||||||||||||||||||||  ||||||| ||||| ||||||||| |||||||||||    
T  37438013 ttgatcaaatatgtgagcatctaatgaattgatgggagccgttagattaaaac--tattaattgctagaatttggtgtgaaatttaattt 37437926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 3583296 - 3583357
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||    
T  3583296 gatttggtgtcaaattaattttgacaccatggtgtcatttgatcctatccctatatatatat 3583357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 39131022 - 39131084
Alignment:
Q  223 attaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc 285  Q
    |||||||| || ||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  39131022 attaatggttatgatttggtgtcaaatttaatttgacacctgggtgtcatttgatcccatccc 39131084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 3583647 - 3583708
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||| | | ||||||||| |||||||||||||||||||||||||||||||||    
T  3583647 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccctatatatatat 3583708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 20054316 - 20054258
Alignment:
Q  238 ttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||||||||| | | ||||||||| |||||||||||||||||||||||||||||||||    
T  20054316 ttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccctatatatatat 20054258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 10092969 - 10092908
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||| ||||||||||| ||||||||| ||| ||||||||||| |||||||||||||||||    
T  10092969 gatttgatgtcaaatttagtttgacaccatggcgtcatttgatcatatccctatatatatat 10092908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 5331156 - 5331101
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    ||||||||||||||||||||||||||| |||||||| |||| ||||||| ||||||    
T  5331156 aataggggtaaatcatgtgcaagagagtcctaagaataaacgatgtagagtccttc 5331101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 226 - 288
Target Start/End: Complemental strand, 16846872 - 16846810
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctat 288  Q
    ||||| || |||||||||||||| | | ||||||||| |||||||||||||||||||||||||    
T  16846872 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccctat 16846810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 16847678 - 16847740
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    |||||||||||||| | | ||||||||| |||||||||||||||||||||| |||||||||||    
T  16847678 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatatatat 16847740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 29267994 - 29267932
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    |||||||||||||| | | ||||||||| |||||||||||||||||||||| |||||||||||    
T  29267994 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatatatat 29267932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 29268820 - 29268881
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||| ||||||||| | ||||||||| ||||||||||||||| |||| ||||||||||||    
T  29268820 gatttgatgtcaaattaattttgacaccatggtgtcatttgatcatatctctatatatatat 29268881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 295
Target Start/End: Complemental strand, 34654261 - 34654192
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatata 295  Q
    ||||| || |||||| ||||||| | | ||||||||| ||||||||||||||||||||| ||||||||||    
T  34654261 aatggataagatttgctgtcaaactaattttgacaccatggtgtcatttgatcctatccttatatatata 34654192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 167 - 279
Target Start/End: Original strand, 5882349 - 5882461
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    |||||||||||||||||||||||||||||||||| |   ||   ||||||      |||||||| |||||||| ||||||||||||||||||||  |||     
T  5882349 ttgatcaagcatgtgagcatttaatgaattgatgagcaacggcggattaatgttggattaatggttaggattttgtgtcaaatttaatttgacagtttga 5882448  T
Q  267 tgtcatttgatcc 279  Q
    | |||||||||||    
T  5882449 tttcatttgatcc 5882461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 223 - 282
Target Start/End: Original strand, 25129349 - 25129408
Alignment:
Q  223 attaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctat 282  Q
    |||||||| || |||||| ||||||||||||||||||||||| ||||||| || ||||||    
T  25129349 attaatggttacgatttgatgtcaaatttaatttgacaccttagtgtcatatggtcctat 25129408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 29267658 - 29267708
Alignment:
Q  25 gggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    |||||||||||||||||||||| |||||||| |||| ||||||| ||||||    
T  29267658 gggtaaatcatgtgcaagagagtcctaagaataaacgatgtagagtccttc 29267708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 10093537 - 10093598
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||| ||||||||||| ||||||||| || | |||||||||| ||| |||||||||||||    
T  10093537 gatttgatgtcaaatttagtttgacaccatgatatcatttgatcttattcctatatatatat 10093598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 296
Target Start/End: Original strand, 29267908 - 29267941
Alignment:
Q  263 ttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||||||||||||||||||||||||||||||||    
T  29267908 ttggtgtcatttgatcctatccctatatatatat 29267941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 34654941 - 34654986
Alignment:
Q  252 aatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||    
T  34654941 aatttgacaccatggtgtcatttgatcctatcccatatatatatat 34654986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 5331963 - 5332013
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatc 71  Q
    ||||||||||| |||||||||| ||||||||||||| |||| ||||||||||    
T  5331963 aataggggtaactcatgtgcaaaagagccctaagaataaac-atgtagaatc 5332013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 204
Target Start/End: Complemental strand, 39861074 - 39861043
Alignment:
Q  173 aagcatgtgagcatttaatgaattgatgggag 204  Q
    ||||||||||||||||||||||||||||||||    
T  39861074 aagcatgtgagcatttaatgaattgatgggag 39861043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 42987284 - 42987339
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    |||||||| ||| |||||||||||||||||||| || || | ||||||||||||||    
T  42987284 aataggggcaaaacatgtgcaagagagccctaataataagccatgtagaatccttc 42987339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 3582482 - 3582420
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    |||||||||||||| | | ||||||||| || |||||||||||| |||||| |||||||||||    
T  3582482 gatttggtgtcaaactaattttgacaccatgatgtcatttgatcatatcccatatatatatat 3582420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 14754222 - 14754163
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||| | | |||||||||   ||||||||||||| |||||||||||||||||    
T  14754222 gatttggtgtcaaactaattttgacacca--gtgtcatttgatcatatccctatatatatat 14754163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 24023027 - 24023089
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    |||||| ||||||| | | ||||||||| |||||||||||||||||| ||| |||||||||||    
T  24023027 gatttgttgtcaaactaattttgacaccatggtgtcatttgatcctaacccatatatatatat 24023089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 29266429 - 29266380
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaat 70  Q
    |||| |||||| |||||||||||||||||||||||| |||| |||||||||    
T  29266429 aataagggtaactcatgtgcaagagagccctaagaataaac-atgtagaat 29266380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 7e-59; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 166 - 297
Target Start/End: Complemental strand, 38059966 - 38059835
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  38059966 cttgatcaagcatgtgagcacttaatgagtttatgggagccgttagattaaaaccgtattaatggctaggatttggtgtcaaatttaatttgacaccttg 38059867  T
Q  266 gtgtcatttgatcctatccctatatatatatt 297  Q
    ||||||||||||||||||||||||||||||||    
T  38059866 gtgtcatttgatcctatccctatatatatatt 38059835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 8513400 - 8513530
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||    
T  8513400 cttgatcaagcatgtgagcacttaatgaattgatgggagccgttagattaaaactgtattattggctaggatttggtgtcaaatttaatttgacaccttg 8513499  T
Q  266 gtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||||||||||||||||||||    
T  8513500 gtgtcatttgatcctatccctatatatatat 8513530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 166 - 298
Target Start/End: Original strand, 8487745 - 8487877
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||     
T  8487745 cttgatcaagcatgtgagcacttaatgaattgatgagagccgttagattaaaactgtattaatggctaggatttggtgtcaaatttaatttgacaccttc 8487844  T
Q  266 gtgtcatttgatcctatccctatatatatatta 298  Q
    |||||||||||||||||||||||||||||||||    
T  8487845 gtgtcatttgatcctatccctatatatatatta 8487877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 166 - 297
Target Start/End: Complemental strand, 8487148 - 8487016
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||    
T  8487148 cttgatcaagcatgtgagcacttaatgaattgatgagagccgttagattaagcccgtattaatggctaggatttggtgtcaaatttaatttgacaccttg 8487049  T
Q  266 gtgtcatttgatcctatccc-tatatatatatt 297  Q
    |||||||||||||||||||| ||||||||||||    
T  8487048 gtgtcatttgatcctatcccatatatatatatt 8487016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 8512823 - 8512692
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||    
T  8512823 cttgatcaagcatgtgagcacttaatgaattgatgagagccgttagattaagcccgtattaatggctaggatttggtgtcaaatttaatttgacaccttg 8512724  T
Q  266 gtgtcatttgatcctatccc-tatatatatat 296  Q
    |||||||||||||||||||| |||||||||||    
T  8512723 gtgtcatttgatcctatcccatatatatatat 8512692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 31178759 - 31178630
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||| ||||||||| || ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||    
T  31178759 cttgatcaagcatgtgagtatttaatgagtttatgggagccgttagattaaaactgtattaatggctaggatttggtgtcaaatttaatttgacatcttg 31178660  T
Q  266 gtgtcatttgatcctatccctatatatatat 296  Q
    ||||||||||||| ||| |||||||||||||    
T  31178659 gtgtcatttgatcatat-cctatatatatat 31178630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 173 - 296
Target Start/End: Original strand, 31179863 - 31179985
Alignment:
Q  173 aagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcat 272  Q
    ||||||| ||||| ||||||| || ||||||||||||||||||||||  ||| ||||| || ||||||||||||||||||||||||||||||||||||||    
T  31179863 aagcatgcgagcacttaatgagtttatgggagccgttagattaaaactgtat-aatggttaagatttggtgtcaaatttaatttgacaccttggtgtcat 31179961  T
Q  273 ttgatcctatccctatatatatat 296  Q
    ||||||||||||||||||||||||    
T  31179962 ttgatcctatccctatatatatat 31179985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 171 - 296
Target Start/End: Complemental strand, 3162982 - 3162858
Alignment:
Q  171 tcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtc 270  Q
    ||||||||||||||||||||||| |||||| ||| ||| ||||||||     |||||||| |||||||||||||||||||||||||||||||||||||||    
T  3162982 tcaagcatgtgagcatttaatgatttgatgagagacgtcagattaaagtgg-attaatggttaggatttggtgtcaaatttaatttgacaccttggtgtc 3162884  T
Q  271 atttgatcctatccctatatatatat 296  Q
    ||||||||||||||||||||||||||    
T  3162883 atttgatcctatccctatatatatat 3162858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 167 - 294
Target Start/End: Original strand, 46428056 - 46428183
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    ||||||||||||||||||||||||||||||||||  || |||| |||||||     |||||||| ||  ||||||||||||||||||||||||||| |||    
T  46428056 ttgatcaagcatgtgagcatttaatgaattgatgatagacgttggattaaagttgaattaatggttataatttggtgtcaaatttaatttgacaccatgg 46428155  T
Q  267 tgtcatttgatcctatccctatatatat 294  Q
    ||||||||||||||||||||||||||||    
T  46428156 tgtcatttgatcctatccctatatatat 46428183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 167 - 296
Target Start/End: Original strand, 43334664 - 43334794
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||||||     |||||||| || |||||||||||||||||||||||||| | |||    
T  43334664 ttgatcaagcatgtgagcatttaatgaattgatgatagacgttagattaaagttgaattaatggttatgatttggtgtcaaatttaatttgacatcatgg 43334763  T
Q  267 tgtcatttgatcctatccc-tatatatatat 296  Q
    ||||||||||||||||||| |||||||||||    
T  43334764 tgtcatttgatcctatcccatatatatatat 43334794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 170 - 296
Target Start/End: Original strand, 3163438 - 3163565
Alignment:
Q  170 atcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgt 269  Q
    |||||||||||||||||||||||||||||||  || |||| |||||||     |||||||| || |||||||||||||||||||||||||||| ||||||    
T  3163438 atcaagcatgtgagcatttaatgaattgatgatagacgttggattaaagttgaattaatggttatgatttggtgtcaaatttaatttgacaccatggtgt 3163537  T
Q  270 catttgatcctatccc-tatatatatat 296  Q
    |||||||||||||||| |||||||||||    
T  3163538 catttgatcctatcccatatatatatat 3163565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 173 - 296
Target Start/End: Complemental strand, 30659967 - 30659844
Alignment:
Q  173 aagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcat 272  Q
    ||||||| |||||||||||||||||||| ||| |||  |||||||     |||||||| || |||||||||||||||||||||||||||| |||||||||    
T  30659967 aagcatgcgagcatttaatgaattgatgagagacgtcggattaaagttgaattaatggttatgatttggtgtcaaatttaatttgacaccatggtgtcat 30659868  T
Q  273 ttgatcctatccctatatatatat 296  Q
    ||||||||||||||||||||||||    
T  30659867 ttgatcctatccctatatatatat 30659844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 171 - 296
Target Start/End: Complemental strand, 30469625 - 30469500
Alignment:
Q  171 tcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtc 270  Q
    ||||||||||||||||||||||| |||||| ||| ||| | ||||||     |||||||| |||||||||||||||||||||||||||||||||||||||    
T  30469625 tcaagcatgtgagcatttaatgatttgatgagagacgtcaaattaaagtgg-attaatggttaggatttggtgtcaaatttaatttgacaccttggtgtc 30469527  T
Q  271 atttgatcctatccc-tatatatatat 296  Q
    ||||||||||||||| |||||||||||    
T  30469526 atttgatcctatcccatatatatatat 30469500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 167 - 281
Target Start/End: Complemental strand, 43742838 - 43742724
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    ||||| ||||||||||||||||||||| | ||||||| |||||||||||||||  ||||||| ||||| ||||| ||||||||||||||||| ||||||     
T  43742838 ttgattaagcatgtgagcatttaatgagtcgatgggaaccgttagattaaaactgtattaatagctagaatttgatgtcaaatttaatttgataccttga 43742739  T
Q  267 tgtcatttgatccta 281  Q
    |||||||||||||||    
T  43742738 tgtcatttgatccta 43742724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 3475020 - 3474901
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    |||||||||||||||||||||||||||||||||| ||| |||| |||||||     |||||||| || |||||||||||||||||||||||||||| | |    
T  3475020 ttgatcaagcatgtgagcatttaatgaattgatgagagacgttggattaaagttgaattaatggttatgatttggtgtcaaatttaatttgacaccatag 3474921  T
Q  267 tgtcatttgatcctatccct 286  Q
    | ||||||||||||||||||    
T  3474920 tatcatttgatcctatccct 3474901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 3475508 - 3475627
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    ||||||||||||||||| |||||||||||||||| ||| ||| ||||||||     |||||||| || ||||||||||||||||| |||||||||| |||    
T  3475508 ttgatcaagcatgtgagtatttaatgaattgatgagagacgtcagattaaagttggattaatggttatgatttggtgtcaaatttgatttgacaccatgg 3475607  T
Q  267 tgtcatttgatcctatccct 286  Q
    ||||||||||||||||||||    
T  3475608 tgtcatttgatcctatccct 3475627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 25245598 - 25245706
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    ||||||||| |||||||||| |||||||||| ||| ||| | ||||||||||||  |||||||||||| ||||||||||| ||||||||||||||| |||    
T  25245598 cttgatcaaacatgtgagcacttaatgaattaatgagagtcattagattaaaacagtattaatggctaagatttggtgtctaatttaatttgacacattg 25245697  T
Q  266 gtgtcattt 274  Q
    |||||||||    
T  25245698 gtgtcattt 25245706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 175 - 296
Target Start/End: Complemental strand, 43334239 - 43334119
Alignment:
Q  175 gcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcattt 274  Q
    ||||||||||||||||||| |||||| ||| ||| ||||||||     |||||||| || |||||| ||||||| |||||||||||||||||||||||||    
T  43334239 gcatgtgagcatttaatgatttgatgagagacgtcagattaaagtgg-attaatggttatgatttgatgtcaaacttaatttgacaccttggtgtcattt 43334141  T
Q  275 gatcctatccctatatatatat 296  Q
    |||||||||| |||||||||||    
T  43334140 gatcctatccatatatatatat 43334119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 167 - 283
Target Start/End: Complemental strand, 26774112 - 26773996
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    |||||||||||||||||||||||||||||||| | ||| |||| |||||||     |||||||| || ||||| |||||||||||||||||||||| ||     
T  26774112 ttgatcaagcatgtgagcatttaatgaattgacgagagacgttggattaaagttgaattaatggttatgatttagtgtcaaatttaatttgacaccatga 26774013  T
Q  267 tgtcatttgatcctatc 283  Q
    |||||||||||||||||    
T  26774012 tgtcatttgatcctatc 26773996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 28451243 - 28451163
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtca 246  Q
    |||||||||| ||||||| | |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  28451243 cttgatcaagtatgtgagtacttaatgaattgatgagagccgttagattaaaaccgtattaatggctaggatttggtgtca 28451163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 173 - 286
Target Start/End: Complemental strand, 37422671 - 37422558
Alignment:
Q  173 aagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcat 272  Q
    |||||||||||||||||||||||||||| ||| |||  |||||||     |||||||| || |||||| ||||||||||||||||||||| |||| ||||    
T  37422671 aagcatgtgagcatttaatgaattgatgagagacgtcggattaaagttgaattaatggttatgatttgatgtcaaatttaatttgacaccatggtatcat 37422572  T
Q  273 ttgatcctatccct 286  Q
    ||||||||||||||    
T  37422571 ttgatcctatccct 37422558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 167 - 271
Target Start/End: Original strand, 30470038 - 30470142
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    ||||||||||||||||||||||||||||||||||  || |||| |||||||     |||||||| || |||||||||||||||||||||||||||| |||    
T  30470038 ttgatcaagcatgtgagcatttaatgaattgatgatagacgtttgattaaagttgaattaatggttatgatttggtgtcaaatttaatttgacaccatgg 30470137  T
Q  267 tgtca 271  Q
    |||||    
T  30470138 tgtca 30470142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 21415400 - 21415461
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21415400 gatttggtgtcatatttaatttgacaccttggtgtcatttgatcctaaccctatatatatat 21415461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 166 - 285
Target Start/End: Complemental strand, 21865685 - 21865566
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||  ||||||||| |||||||||||||| || || || ||||||||| |||| ||||| ||  |||||||||||||||| |||||| | ||||    
T  21865685 cttgatcaaaaatgtgagcacttaatgaattgatgtgaaccttttgattaaaactatatgaatggttaaaatttggtgtcaaatttgatttgaaatcttg 21865586  T
Q  266 gtgtcatttgatcctatccc 285  Q
     |||||||||||| ||||||    
T  21865585 atgtcatttgatcatatccc 21865566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 173 - 296
Target Start/End: Original strand, 30660452 - 30660574
Alignment:
Q  173 aagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcat 272  Q
    ||||||| ||||||| |||||||||||| ||| |||  |||||||     |||||||| || |||||||| ||||||||||||||||| | |||||||||    
T  30660452 aagcatgggagcattcaatgaattgatgagagacgtcggattaaagttgaattaatggttatgatttggtctcaaatttaatttgacatcatggtgtcat 30660551  T
Q  273 ttgatcctatccctatatatatat 296  Q
    |||||||||| |||||||||||||    
T  30660552 ttgatcctat-cctatatatatat 30660574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 179 - 296
Target Start/End: Original strand, 26774620 - 26774737
Alignment:
Q  179 gtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatc 278  Q
    |||||||||||||||||||||| ||| ||| ||||||||     |||||||| || |||||| |||||||||| |||||||||| || ||||||||||||    
T  26774620 gtgagcatttaatgaattgatgagagacgtcagattaaagttggattaatggttatgatttgatgtcaaatttgatttgacaccatgatgtcatttgatc 26774719  T
Q  279 ctatccctatatatatat 296  Q
     ||||| | |||||||||    
T  26774720 atatccgtgtatatatat 26774737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 8487598 - 8487653
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  8487598 aataggggtaaatcatgtgcaagagagccctaagaataaacgatgtagaatccttc 8487653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 255
Target Start/End: Original strand, 21866321 - 21866409
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatt 255  Q
    |||||||| |||||||||| |||||||||||||| ||  | ||||||||||||  ||||||||| |||||||| ||||||| |||||||    
T  21866321 ttgatcaaacatgtgagcacttaatgaattgatgagaaacattagattaaaactgtattaatggttaggattttgtgtcaactttaatt 21866409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 296
Target Start/End: Original strand, 32022658 - 32022728
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||| || |||||||||||||| | | ||||||||| ||||||||||||||| |||||||||||||||||    
T  32022658 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcatatccctatatatatat 32022728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 3219354 - 3219294
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  3219354 gatttagtgtcatatttaatttgacaccttggtgtcatttgatcctaaccc-atatatatat 3219294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 36784519 - 36784580
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||| | | ||||||||| |||| ||||||||||||||||||||||||||||    
T  36784519 gatttggtgtcaaactaattttgacaccatggtatcatttgatcctatccctatatatatat 36784580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 42489977 - 42490038
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||| | | ||||||||| |||||||||||||||||||||||| ||||||||    
T  42489977 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccctagatatatat 42490038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 32021281 - 32021210
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    ||||| || |||||||||||||| | | ||||||||| |||||||||||||||||||||| |||||||||||    
T  32021281 aatgggtaagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatatatat 32021210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 30471011 - 30471071
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||| | | ||||||||| |||||||||||||||||||||| ||||||||||    
T  30471011 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccc-atatatatat 30471071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 43065834 - 43065895
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||||||| ||||||| | |||||||||||||||||||   |||||||||||    
T  43065834 gatttggtgtcaaatttagtttgacatcatggtgtcatttgatcctatatatatatatatat 43065895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 235 - 278
Target Start/End: Complemental strand, 4962418 - 4962374
Alignment:
Q  235 gatttggtgtcaaa-tttaatttgacaccttggtgtcatttgatc 278  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  4962418 gatttggtgtcaaaatttaatttgacaccttggtgtcatttgatc 4962374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 167 - 251
Target Start/End: Complemental strand, 38816804 - 38816720
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaattt 251  Q
    |||||||||||||||||||||| ||||||||||| ||| | | ||||||||   | |||||| | || |||||||||||||||||    
T  38816804 ttgatcaagcatgtgagcatttgatgaattgatgagagacatcagattaaagttagattaatagttatgatttggtgtcaaattt 38816720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 24306408 - 24306349
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc 285  Q
    ||||| || |||||||||||||| | | ||||||||| ||||||||||||||||||||||    
T  24306408 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccc 24306349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 30001862 - 30001791
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    ||||| || |||||||||||||| | | ||||||||| | |||||||||||||||||||| |||||||||||    
T  30001862 aatggataagatttggtgtcaaactaattttgacaccatagtgtcatttgatcctatcccatatatatatat 30001791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 296
Target Start/End: Original strand, 30469434 - 30469505
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    ||||| || |||||| ||||||| | | ||||||||| |||||||||||||||||||||| |||||||||||    
T  30469434 aatggataagatttgatgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatatatat 30469505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 38060107 - 38060059
Alignment:
Q  25 gggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatcctt 74  Q
    |||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  38060107 gggtaactcatgtgcaagagagccctaagaataaac-atgtagaatcctt 38060059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 21414764 - 21414705
Alignment:
Q  236 atttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||||||||| ||||||||||||||||||  ||||||||||| ||| | |||||||||||    
T  21414764 atttggtgtcacatttaatttgacaccttgaagtcatttgatcttat-catatatatatat 21414705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 30468743 - 30468697
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatccta 281  Q
    |||||||||||||| | | ||||||||| ||||||||||||||||||    
T  30468743 gatttggtgtcaaactaattttgacaccatggtgtcatttgatccta 30468697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 37706327 - 37706389
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    |||||||||||||| | | ||||||||| | |||||||||||||||| ||| |||||||||||    
T  37706327 gatttggtgtcaaactaattttgacaccatagtgtcatttgatcctaacccatatatatatat 37706389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 285
Target Start/End: Complemental strand, 42489264 - 42489214
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc 285  Q
    |||||||||||||| | | ||||||||| |||||||||||||| |||||||    
T  42489264 gatttggtgtcaaactaattttgacaccatggtgtcatttgattctatccc 42489214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 277
Target Start/End: Original strand, 26076900 - 26076941
Alignment:
Q  236 atttggtgtcaaatttaatttgacaccttggtgtcatttgat 277  Q
    |||||||||||| |||||||| |||||||| |||||||||||    
T  26076900 atttggtgtcaattttaatttaacaccttgatgtcatttgat 26076941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 277
Target Start/End: Original strand, 26100687 - 26100728
Alignment:
Q  236 atttggtgtcaaatttaatttgacaccttggtgtcatttgat 277  Q
    |||||||||||| |||||||| |||||||| |||||||||||    
T  26100687 atttggtgtcaattttaatttaacaccttgatgtcatttgat 26100728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 296
Target Start/End: Complemental strand, 28451171 - 28451138
Alignment:
Q  263 ttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||||| |||||||||||||||||    
T  28451171 ttggtgtcatttgatcatatccctatatatatat 28451138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 30002563 - 30002624
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||| ||||||| | | ||||||||| |||||||||||||||||| |  |||||||||||    
T  30002563 gatttgatgtcaaactaattttgacaccatggtgtcatttgatcctaactatatatatatat 30002624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 36783808 - 36783747
Alignment:
Q  236 atttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    ||||||||||||| | | ||||||||| |||| ||||||||||||| ||| |||||||||||    
T  36783808 atttggtgtcaaactaattttgacaccatggtatcatttgatcctaacccatatatatatat 36783747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 4e-57; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 166 - 294
Target Start/End: Complemental strand, 21146055 - 21145927
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21146055 cttgatcaagcatgtgagcacttaatgagtttatgggagccgttagattaaaaccgtattaatggctaggatttggtgtcaaatttaatttgacaccttg 21145956  T
Q  266 gtgtcatttgatcctatccctatatatat 294  Q
    |||||||||||||||||||||||||||||    
T  21145955 gtgtcatttgatcctatccctatatatat 21145927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 23206131 - 23206261
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||| ||||||| || ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23206131 cttgatcaagcatgtgagcacttaatgagtttatgagagccgttagattaaaaccgtattaatggctaggatttggtgtcaaatttaatttgacaccttg 23206230  T
Q  266 gtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||||||||||||||||||||    
T  23206231 gtgtcatttgatcctatccctatatatatat 23206261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 42521628 - 42521759
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||| ||||||| || ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42521628 cttgatcaagcatgtgagcacttaatgagtttatgagagccgttagattaaaaccgtattaatggctaggatttggtgtcaaatttaatttgacaccttg 42521727  T
Q  266 gtgtcatttgatcctatccc-tatatatatat 296  Q
    |||||||||||||||||||| |||||||||||    
T  42521728 gtgtcatttgatcctatcccatatatatatat 42521759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 21148034 - 21148165
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    ||||||||||||||||| || ||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21148034 cttgatcaagcatgtgaacacttaatgagtttatgggagccgttagattaaaaccgtattaatggctaggatttggtgtcaaatttaatttgacaccttg 21148133  T
Q  266 gtgtcatttgatcctatc-cctatatatatat 296  Q
    |||||||||||||||||| | |||||||||||    
T  21148134 gtgtcatttgatcctatctcatatatatatat 21148165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 42520736 - 42520606
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||| ||||||| || ||| ||| ||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||    
T  42520736 cttgatcaagcatgtgagcacttaatgagtttatgagagtcgttagattaaaaccgtattaatggctaggatttggtgtaaaatttaatatgacaccttg 42520637  T
Q  266 gtgtcatttgatcctatccctatatatatat 296  Q
    ||||||||||||||||||||| |||||||||    
T  42520636 gtgtcatttgatcctatccctgtatatatat 42520606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 170 - 284
Target Start/End: Original strand, 42520372 - 42520486
Alignment:
Q  170 atcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgt 269  Q
    ||||||||||||||||||||||||||||||| ||| |||| ||||||      |||||||| ||| ||||||||||||||||||||||||||||||||||    
T  42520372 atcaagcatgtgagcatttaatgaattgatgagagacgttggattaatgttgaattaatggttagaatttggtgtcaaatttaatttgacaccttggtgt 42520471  T
Q  270 catttgatcctatcc 284  Q
     ||||||||||||||    
T  42520472 tatttgatcctatcc 42520486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 167 - 278
Target Start/End: Complemental strand, 42519758 - 42519647
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    ||||||||| || |||| |||||||||||||||| ||| |||  |||||||     |||||||| || ||||||||||||||||||||||||||||||||    
T  42519758 ttgatcaagtatttgagtatttaatgaattgatgagagacgtcggattaaagtttgattaatggttatgatttggtgtcaaatttaatttgacaccttgg 42519659  T
Q  267 tgtcatttgatc 278  Q
    ||||||||||||    
T  42519658 tgtcatttgatc 42519647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 167 - 274
Target Start/End: Original strand, 31219927 - 31220034
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    |||||||||| | ||||||  | |||||||||||| |||||||| ||||||||  |||||||| | | ||||| |||||||||||||||||| |||||||    
T  31219927 ttgatcaagcttatgagcacatgatgaattgatggaagccgttacattaaaactgtattaatgacgaagatttagtgtcaaatttaatttgagaccttgg 31220026  T
Q  267 tgtcattt 274  Q
    ||||||||    
T  31220027 tgtcattt 31220034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 11768892 - 11768830
Alignment:
Q  235 gatttggtgtcaaa-tttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||| |||| ||||||||| || ||||||||||||||||||||||||||||||    
T  11768892 gatttggtgtcaaaatttagtttgacaccatgatgtcatttgatcctatccctatatatatat 11768830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 14480808 - 14480738
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||| || |||||||||||||| | | ||||||||| ||||||||||||||| |||||||||||||||||    
T  14480808 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcatatccctatatatatat 14480738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 31218813 - 31218724
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaattt 256  Q
    |||||||| | ||||||||||| |||||||||||| | |  ||||||| ||||  |||||||| |||| |||||||||||||||||||||    
T  31218813 ttgatcaaccttgtgagcatttgatgaattgatggaaactattagattcaaactgtattaatgactagaatttggtgtcaaatttaattt 31218724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 296
Target Start/End: Original strand, 492132 - 492203
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    ||||| || |||||||||||||| | | ||||||||| |||||||||||||||||||||| |||||||||||    
T  492132 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatatatat 492203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 3259131 - 3259060
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    ||||| || |||||||||||||| | | ||||||||| |||||||||||||||||||||| |||||||||||    
T  3259131 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatatatat 3259060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 296
Target Start/End: Original strand, 14481456 - 14481527
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    ||||| || |||||||||||||| | | ||||||||| |||||||||||||||||||||| |||||||||||    
T  14481456 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatatatat 14481527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 21146198 - 21146143
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    ||||||||||||||||||||||||||| |||||||| |||| ||||||| ||||||    
T  21146198 aataggggtaaatcatgtgcaagagagtcctaagaataaacgatgtagagtccttc 21146143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 23205984 - 23206038
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||    
T  23205984 aataggggtaactcatgtgcaagagagccctaagaataaac-atgtagaatccttc 23206038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 4737104 - 4737034
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||| || |||||| ||||||| ||| ||||||||| ||||||||||||||| ||||| |||||||||||    
T  4737104 aatggataagatttgatgtcaaacttattttgacaccatggtgtcatttgatcttatccatatatatatat 4737034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 226 - 286
Target Start/End: Complemental strand, 10394164 - 10394104
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccct 286  Q
    ||||| || |||||||||||||||| | ||||||||| ||||||||||||||| |||||||    
T  10394164 aatggataagatttggtgtcaaattaattttgacaccatggtgtcatttgatcttatccct 10394104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 36038591 - 36038651
Alignment:
Q  236 atttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||||||||||| | | ||||||||| |||||||||||||||||| || |||||||||||    
T  36038591 atttggtgtcaaactaattttgacaccatggtgtcatttgatcctaaccatatatatatat 36038651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 9917788 - 9917729
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc 285  Q
    ||||| || |||||||||||||| | | ||||||||| ||||||||||||||||||||||    
T  9917788 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccc 9917729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 15915811 - 15915870
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc 285  Q
    ||||| || |||||||||||||| | | ||||||||| ||||||||||||||||||||||    
T  15915811 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccc 15915870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 42521483 - 42521537
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    ||||||||||| |||||||||||||| ||||||||| |||| ||||||||||||||    
T  42521483 aataggggtaactcatgtgcaagagaaccctaagaataaac-atgtagaatccttc 42521537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 3259813 - 3259875
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    |||||||||||||| | | ||||||||| |||||||||||||||||| ||| |||||||||||    
T  3259813 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaacccatatatatatat 3259875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 15883225 - 15883155
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||| || |||||| ||||||| | | ||||||||| || ||||||||||||||| ||||||||||||||    
T  15883225 aatggataagatttgatgtcaaactaattttgacaccatgatgtcatttgatcctaaccctatatatatat 15883155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 42520878 - 42520824
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatcctt 74  Q
    ||||||||||||||||||||||||||| |||||||| |||| | ||||| |||||    
T  42520878 aataggggtaaatcatgtgcaagagagtcctaagaataaacgacgtagagtcctt 42520824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 237 - 278
Target Start/End: Complemental strand, 20589437 - 20589396
Alignment:
Q  237 tttggtgtcaaatttaatttgacaccttggtgtcatttgatc 278  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  20589437 tttggtgtcaaattaactttgacaccttggtgtcatttgatc 20589396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 235 - 286
Target Start/End: Original strand, 10394869 - 10394920
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccct 286  Q
    |||||||||||||| | | ||||||||| ||||||||||| |||||||||||    
T  10394869 gatttggtgtcaaactaattttgacaccatggtgtcattttatcctatccct 10394920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 71
Target Start/End: Original strand, 21147889 - 21147939
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatc 71  Q
    ||||||||||| |||||||||| ||||||||||||| |||| ||||||||||    
T  21147889 aataggggtaactcatgtgcaaaagagccctaagaataaac-atgtagaatc 21147939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 15915134 - 15915088
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatccta 281  Q
    |||||||||||||||| | ||||||||| || |||||||||||||||    
T  15915134 gatttggtgtcaaattaattttgacaccatgatgtcatttgatccta 15915088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 281
Target Start/End: Original strand, 25836615 - 25836661
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatccta 281  Q
    |||||||||||||| | | ||||||||| ||||||||||||||||||    
T  25836615 gatttggtgtcaaaataattttgacaccatggtgtcatttgatccta 25836661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 278
Target Start/End: Complemental strand, 25835913 - 25835861
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatc 278  Q
    ||||| || |||||||||||||| | | ||||||||| |||||||||||||||    
T  25835913 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatc 25835861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 6e-56; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 45919630 - 45919500
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||    
T  45919630 cttgatcaagcatgtgagcacttaatgaattgatgagagccgttagattaaaaccgtattaatgactaggatttgatgtcaaatttaatttgacaccttg 45919531  T
Q  266 gtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||||||||||||||||||||    
T  45919530 gtgtcatttgatcctatccctatatatatat 45919500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 166 - 285
Target Start/End: Original strand, 41696057 - 41696176
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||    
T  41696057 cttgatcaagcatgtgagcacttaatgaattgatgggagccgttagattaaaaccgtattaatagctaagatttggtgtcaaatttaatttgacaccttg 41696156  T
Q  266 gtgtcatttgatcctatccc 285  Q
    || |||||||||||||||||    
T  41696157 gtatcatttgatcctatccc 41696176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 166 - 286
Target Start/End: Original strand, 46619564 - 46619684
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||    
T  46619564 cttgatcaagcatgtgagcacttaatgagtttatgggagccgttagattaaaaccgtattaattgctatgatttggtgtcaaatttaatttgacaccttg 46619663  T
Q  266 gtgtcatttgatcctatccct 286  Q
    ||||||||||||| |||||||    
T  46619664 gtgtcatttgatcatatccct 46619684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 166 - 286
Target Start/End: Complemental strand, 41695503 - 41695383
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    ||||||||| ||||||| || ||||||||||||||| |||||||||||||||||| |||||||   ||||||||||||||||||||||||||||||||||    
T  41695503 cttgatcaaacatgtgaacacttaatgaattgatggaagccgttagattaaaaccgtattaataattaggatttggtgtcaaatttaatttgacaccttg 41695404  T
Q  266 gtgtcatttgatcctatccct 286  Q
    |||||||||||||||||||||    
T  41695403 gtgtcatttgatcctatccct 41695383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 166 - 271
Target Start/End: Original strand, 45920224 - 45920329
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||| ||||||||||||    
T  45920224 cttgatcaagcatgtgagcacttaatgaattgatgggagccgttagattaaaactgtattaatggctagaatttggtgtcaaatttagtttgacaccttg 45920323  T
Q  266 gtgtca 271  Q
    ||||||    
T  45920324 gtgtca 45920329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 173 - 296
Target Start/End: Complemental strand, 42058598 - 42058475
Alignment:
Q  173 aagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcat 272  Q
    |||||||||| ||||||||||||| ||| || ||||||||||||||  |||||||| | |||||||||||||||||||||||||||||  ||| ||||||    
T  42058598 aagcatgtgaacatttaatgaatttatgagaaccgttagattaaaattatattaatagttaggatttggtgtcaaatttaatttgacattttgatgtcat 42058499  T
Q  273 ttgatcctatccctatatatatat 296  Q
    |||||||||||| |||||||||||    
T  42058498 ttgatcctatccatatatatatat 42058475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 167 - 285
Target Start/End: Original strand, 4158549 - 4158667
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    |||||||| |||||||||| ||||| |||| |||| | ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||  |    
T  4158549 ttgatcaaacatgtgagcacttaataaattaatggaaaccgttagattaaaattgtattaatggctaggatttggtgtcaaatttaatttgacacctaag 4158648  T
Q  267 tgtcatttgatcctatccc 285  Q
    |||||||||||||||||||    
T  4158649 tgtcatttgatcctatccc 4158667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 167 - 296
Target Start/End: Original strand, 21825085 - 21825214
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    ||||||||||||||||||||||||||||||||||  || |||| |||||||     |||||||| ||  ||||||||||||||||||||||||||| |||    
T  21825085 ttgatcaagcatgtgagcatttaatgaattgatgatagacgttggattaaagttgaattaatggttataatttggtgtcaaatttaatttgacaccatgg 21825184  T
Q  267 tgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||||||| |||||||||||    
T  21825185 tgtcatttgatcctatccatatatatatat 21825214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 170 - 282
Target Start/End: Complemental strand, 31915278 - 31915167
Alignment:
Q  170 atcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgt 269  Q
    |||||| ||||||||| ||||| |||| ||| || |||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||| ||||    
T  31915278 atcaagtatgtgagcacttaataaattaatgagaaccgttagattaaaaccgtattaatgactagaatttggtgtcaaatttaatttgacacctt-gtgt 31915180  T
Q  270 catttgatcctat 282  Q
    |||||||||||||    
T  31915179 catttgatcctat 31915167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 171 - 296
Target Start/End: Complemental strand, 21824670 - 21824545
Alignment:
Q  171 tcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtc 270  Q
    ||||||||||||||||||||||| |||||| ||| ||| ||||||||     |||||||| ||| |||||||||||||||||||||||||||||| ||||    
T  21824670 tcaagcatgtgagcatttaatgatttgatgagagacgtcagattaaagtgg-attaatggttagaatttggtgtcaaatttaatttgacaccttgatgtc 21824572  T
Q  271 atttgatcctatccc-tatatatatat 296  Q
    |||||||| |||||| |||||||||||    
T  21824571 atttgatcatatcccatatatatatat 21824545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 166 - 289
Target Start/End: Complemental strand, 46618469 - 46618350
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    ||||||||| |||||||||| ||||||| || ||| || |||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||        
T  46618469 cttgatcaaacatgtgagcacttaatgagtttatgagaaccgttagattaaaaccgtattaatggctaggatttgatgtcaaattaaatttgacac---- 46618374  T
Q  266 gtgtcatttgatcctatccctata 289  Q
    || |||||||||| ||||||||||    
T  46618373 gtatcatttgatcatatccctata 46618350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 166 - 285
Target Start/End: Complemental strand, 29212113 - 29212008
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||              |||||||||||||||||||||||||    
T  29212113 cttgatcaagcatgtgagcacttaatgaattgatgggagctgttagattaaaaccgtatta--------------gtgtcaaatttaatttgacaccttg 29212028  T
Q  266 gtgtcatttgatcctatccc 285  Q
    ||||||||||||||||||||    
T  29212027 gtgtcatttgatcctatccc 29212008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 167 - 285
Target Start/End: Complemental strand, 42882866 - 42882748
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    ||||||| ||||| || ||||||||||||||||| | | |||||||||||||    |||||||| || |||||||||||||||||||||| |||| ||||    
T  42882866 ttgatcaggcatgggaacatttaatgaattgatgagggacgttagattaaaattggattaatggttatgatttggtgtcaaatttaatttaacacattgg 42882767  T
Q  267 tgtcatttgatcctatccc 285  Q
    |||||||||||| ||||||    
T  42882766 tgtcatttgatcatatccc 42882748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 182 - 289
Target Start/End: Complemental strand, 4157882 - 4157776
Alignment:
Q  182 agcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatccta 281  Q
    |||| ||||||||||||||  | ||||| ||| ||||   ||||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||    
T  4157882 agcacttaatgaattgatgaaaaccgttcgatcaaaattgtattaatggttaggatttggtgtcaa-ttaaatttgacaccttggtgtcatttgatccta 4157784  T
Q  282 tccctata 289  Q
    ||||||||    
T  4157783 tccctata 4157776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 170 - 282
Target Start/End: Original strand, 24377890 - 24378002
Alignment:
Q  170 atcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgt 269  Q
    ||||||||||||| || |||| ||||||||  |||| ||||||||||||| |||||||||  || |||||| ||| |||||| ||||||||||||  |||    
T  24377890 atcaagcatgtgatcacttaacgaattgattagagctgttagattaaaactatattaatgaataagatttgatgttaaattttatttgacaccttaatgt 24377989  T
Q  270 catttgatcctat 282  Q
    ||| |||||||||    
T  24377990 catctgatcctat 24378002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 6784891 - 6784830
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||| | | ||||||||| |||||||||||||||||||||||||||||||||    
T  6784891 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccctatatatatat 6784830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 550336 - 550386
Alignment:
Q  246 aaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  550336 aaatttagtttgacaccatggtgtcatttgatcctatccctatatatatat 550386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 42419044 - 42418974
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||| || |||||||||||||| | | ||||||||| ||||||||||||||||||||||||||| |||||    
T  42419044 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccctatatgtatat 42418974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 13387775 - 13387836
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||| ||| ||||||||||| |||||||||| |||||| |||||||||||||||||    
T  13387775 gatttggtgttaaaattaatttgacatcttggtgtcaattgatcatatccctatatatatat 13387836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 19549512 - 19549451
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||| | | ||||||||| |||||||||||||||||| ||||||||||||||    
T  19549512 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaaccctatatatatat 19549451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 12834468 - 12834408
Alignment:
Q  236 atttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||||||||||| | | ||||||||| | |||||||||||||||||||||||||||||||    
T  12834468 atttggtgtcaaactaattttgacaccatagtgtcatttgatcctatccctatatatatat 12834408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 41695650 - 41695595
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    ||||||||||||| |||||||||||||||||||||| |||| || |||||||||||    
T  41695650 aataggggtaaattatgtgcaagagagccctaagaataaacgatatagaatccttc 41695595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 45919774 - 45919719
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    |||||||||||||||||||||| ||| ||||||||| |||| ||||||||||||||    
T  45919774 aataggggtaaatcatgtgcaaaagaaccctaagaataaacgatgtagaatccttc 45919719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 285
Target Start/End: Original strand, 4900136 - 4900186
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc 285  Q
    |||||||||||||  |||||||||||||||||||||||||||||| |||||    
T  4900136 gatttggtgtcaagattaatttgacaccttggtgtcatttgatcccatccc 4900186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 36855671 - 36855733
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    |||||||||||||| | | ||||||||| |||||||||||||||||||||| |||||||||||    
T  36855671 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatatatat 36855733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 42419715 - 42419777
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    |||||||||||||| | | ||||||||| |||||||||||||||||||||| |||||||||||    
T  42419715 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatatatat 42419777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 46619423 - 46619475
Alignment:
Q  21 ataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatcctt 74  Q
    |||||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  46619423 ataggggtaactcatgtgcaagagagccctaagaataaac-atgtagaatcctt 46619475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 235 - 282
Target Start/End: Complemental strand, 4899463 - 4899415
Alignment:
Q  235 gatttggtgtcaaa-tttaatttgacaccttggtgtcatttgatcctat 282  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||    
T  4899463 gatttggtgtcaaaatttaatttgacaccttggtggcatttgatcctat 4899415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 19550222 - 19550281
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc 285  Q
    ||||| || |||||||||||||| | | ||||||||| ||||||||||||||||||||||    
T  19550222 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccc 19550281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 25478135 - 25478064
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    ||||| || |||||||||||||| | | ||||||||| |||||||||||||||||| ||| |||||||||||    
T  25478135 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaacccatatatatatat 25478064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 12835181 - 12835243
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    |||||||||||||| | | ||||||||| |||||||||||||||||| ||| |||||||||||    
T  12835181 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaacccatatatatatat 12835243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 46618606 - 46618556
Alignment:
Q  25 gggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    |||||||||||||||||||||| |||||| | |||||||||||| ||||||    
T  46618606 gggtaaatcatgtgcaagagagtcctaaggataaacaatgtagagtccttc 46618556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 50696931 - 50696989
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatata 293  Q
    |||||||||||||| | | ||||||||| |||||||||||||||||| ||||| |||||    
T  50696931 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaaccctagatata 50696989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 52362800 - 52362734
Alignment:
Q  223 attaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctata 289  Q
    |||||||| ||  ||||| ||||||||||||||| |||||||| |||||||||||| | ||||||||    
T  52362800 attaatggttaaaatttgatgtcaaatttaatttaacaccttgatgtcatttgatcatgtccctata 52362734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 25236437 - 25236377
Alignment:
Q  236 atttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||| |||||||| | | ||||||||| || ||||||||||||||| ||||||||||||||    
T  25236437 atttagtgtcaaactaattttgacaccatgatgtcatttgatcctaaccctatatatatat 25236377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 237 - 292
Target Start/End: Complemental strand, 13767538 - 13767483
Alignment:
Q  237 tttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatat 292  Q
    |||||||||||||| | ||||||||| ||||||| ||||||| ||| |||||||||    
T  13767538 tttggtgtcaaattaattttgacaccatggtgtcttttgatcttatacctatatat 13767483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 286
Target Start/End: Original strand, 24534795 - 24534837
Alignment:
Q  244 tcaaatttaatttgacaccttggtgtcatttgatcctatccct 286  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  24534795 tcaaatttaatttgacacattggtttcatttgatcatatccct 24534837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 42883406 - 42883456
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaa 217  Q
    |||||||||||||||| ||||||||||||||||| | | ||| ||||||||    
T  42883406 ttgatcaagcatgtgaacatttaatgaattgatgagggacgtcagattaaa 42883456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 253 - 295
Target Start/End: Original strand, 42883472 - 42883513
Alignment:
Q  253 atttgacaccttggtgtcatttgatcctatccctatatatata 295  Q
    |||||||||||| |||||||||||||||||||| |||||||||    
T  42883472 atttgacaccttagtgtcatttgatcctatccc-atatatata 42883513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 25478803 - 25478864
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||| | | ||||||| | || | ||||||||||||| ||||||||||||||    
T  25478803 gatttggtgtcaaactaattttgacaacatgatatcatttgatcctaaccctatatatatat 25478864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 36854959 - 36854898
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||| ||||||| | | ||||||||| |||||||||||||||||||   |||||||||||    
T  36854959 gatttgatgtcaaactaattttgacaccatggtgtcatttgatcctatatatatatatatat 36854898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 6e-56; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 170 - 296
Target Start/End: Original strand, 20200549 - 20200675
Alignment:
Q  170 atcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgt 269  Q
    ||||||||||||| || ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20200549 atcaagcatgtgaacacttagtgaattgatgggagccgttagattaaaaccgtattaatggctaggatttggtgtcaaatttaatttgacaccttggtgt 20200648  T
Q  270 catttgatcctatccctatatatatat 296  Q
    |||||||||||||||||||||||||||    
T  20200649 catttgatcctatccctatatatatat 20200675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 170 - 296
Target Start/End: Original strand, 20202733 - 20202859
Alignment:
Q  170 atcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgt 269  Q
    ||||||||||||| || ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20202733 atcaagcatgtgaacacttagtgaattgatgggagccgttagattaaaaccgtattaatggctaggatttggtgtcaaatttaatttgacaccttggtgt 20202832  T
Q  270 catttgatcctatccctatatatatat 296  Q
    |||||||||||||||||||||||||||    
T  20202833 catttgatcctatccctatatatatat 20202859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 53950014 - 53950144
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    ||||||||| |||||||||| ||||||||||||||| ||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||    
T  53950014 cttgatcaaacatgtgagcacttaatgaattgatggaagccgttagattaagcccgtattaatggctaggatttggtgtcaaatttaatttgacaccttg 53950113  T
Q  266 gtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||||||||||||||||||||    
T  53950114 gtgtcatttgatcctatccctatatatatat 53950144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 47169094 - 47169223
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  47169094 cttgatcaagcatgtgagcacttaatgagtttatgggagccgttagattaaaaccgtattaatggctaggatttggtgtcaaatttaatttgacaccttg 47169193  T
Q  266 gtgtcatttgatcctatccctatatatatat 296  Q
    ||||||||||||| ||| |||||||||||||    
T  47169194 gtgtcatttgatcttat-cctatatatatat 47169223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 166 - 295
Target Start/End: Complemental strand, 47168006 - 47167877
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||| ||||||| || | | || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  47168006 cttgatcaagcatgtgagcacttaatgagtttacgagaaccgttagattaaaaccgtattaatggctaggatttggtgtcaaatttaatttgacaccttg 47167907  T
Q  266 gtgtcatttgatcctatccctatatatata 295  Q
    ||||||||||||||||||||||| ||||||    
T  47167906 gtgtcatttgatcctatccctatctatata 47167877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 173 - 296
Target Start/End: Complemental strand, 11238628 - 11238504
Alignment:
Q  173 aagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcat 272  Q
    ||||||||||||| ||||||||||||||||| ||||||||| ||||   ||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  11238628 aagcatgtgagcacttaatgaattgatgggaaccgttagatgaaaattgtattaatggttaggatttggtgtcaaatttaatttgacaccttgatgtcat 11238529  T
Q  273 ttgatcctatccc-tatatatatat 296  Q
    ||||||||||||| |||||||||||    
T  11238528 ttgatcctatcccatatatatatat 11238504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 166 - 295
Target Start/End: Complemental strand, 20199984 - 20199857
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    ||||||||| ||||| |||| |  |||||||||||| |||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  20199984 cttgatcaaacatgtaagcact--atgaattgatggaagccgttagattaaaaccgtattaatggctagaatttgatgtcaaatttaatttgacaccttg 20199887  T
Q  266 gtgtcatttgatcctatccctatatatata 295  Q
    |||||||||||||||||   ||||||||||    
T  20199886 gtgtcatttgatcctatatatatatatata 20199857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 166 - 252
Target Start/End: Complemental strand, 53949457 - 53949371
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaattta 252  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  53949457 cttgatcaagcatgtgagcacttaatgaattgatgggagccgttagattaaaaccgtattaatgactatgatttggtgtcaaattta 53949371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 167 - 296
Target Start/End: Original strand, 43400706 - 43400835
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    ||||||||||||||||| |||||||||||||||| ||| |||| |||||||     |||||||| || |||||||||||||||||||||||||||| |||    
T  43400706 ttgatcaagcatgtgagtatttaatgaattgatgagagacgttggattaaagttgaattaatggttatgatttggtgtcaaatttaatttgacaccatgg 43400805  T
Q  267 tgtcatttgatcctatccctatatatatat 296  Q
    ||||||||||||||||   |||||||||||    
T  43400806 tgtcatttgatcctatatatatatatatat 43400835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 167 - 296
Target Start/End: Complemental strand, 51827680 - 51827551
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    ||||||||||||||||||||||||||||||| || ||| |||  |||||||     |||||||| || |||||||||||||||||||||||||||||||     
T  51827680 ttgatcaagcatgtgagcatttaatgaattgttgagagacgtcggattaaagttggattaatggttatgatttggtgtcaaatttaatttgacaccttga 51827581  T
Q  267 tgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||| ||||| |||||||||||    
T  51827580 tgtcatttgatcatatccatatatatatat 51827551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 173 - 294
Target Start/End: Complemental strand, 53948772 - 53948651
Alignment:
Q  173 aagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcat 272  Q
    |||||| ||||||||||||||||||||| ||| |||  |||||||     |||||||| || |||||||||||||||||||||||||||| |||||||||    
T  53948772 aagcatttgagcatttaatgaattgatgagagacgtcggattaaagttgaattaatggttatgatttggtgtcaaatttaatttgacaccatggtgtcat 53948673  T
Q  273 ttgatcctatccctatatatat 294  Q
    ||||||||||||||||||||||    
T  53948672 ttgatcctatccctatatatat 53948651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 173 - 284
Target Start/End: Original strand, 53949257 - 53949368
Alignment:
Q  173 aagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcat 272  Q
    ||||||||||||||| |||||||||||| ||| |||  |||||||     |||||||| || ||||||||||||||||||||||||||||||||||||||    
T  53949257 aagcatgtgagcattcaatgaattgatgagagacgtcggattaaagttgaattaatggttatgatttggtgtcaaatttaatttgacaccttggtgtcat 53949356  T
Q  273 ttgatcctatcc 284  Q
    ||||||||||||    
T  53949357 ttgatcctatcc 53949368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 167 - 285
Target Start/End: Original strand, 41710134 - 41710252
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    |||||||||||||||||||||||||||||||||| ||| |||| |||||||     |||||||  || |||||||||||||||||||||||||||| ||     
T  41710134 ttgatcaagcatgtgagcatttaatgaattgatgagagacgttggattaaagttgaattaatgattatgatttggtgtcaaatttaatttgacaccatga 41710233  T
Q  267 tgtcatttgatcctatccc 285  Q
    |||||||||||| ||||||    
T  41710234 tgtcatttgatcttatccc 41710252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 167 - 283
Target Start/End: Original strand, 53948510 - 53948626
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    |||||||||||||||||||||||||||||||  | ||| ||| ||||||||     |||||||| |||||||||||||||||||||||||| ||| ||||    
T  53948510 ttgatcaagcatgtgagcatttaatgaattgtagagagacgtcagattaaagttggattaatggttaggatttggtgtcaaatttaatttggcacattgg 53948609  T
Q  267 tgtcatttgatcctatc 283  Q
    |||||||||||| ||||    
T  53948610 tgtcatttgatcatatc 53948626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 223 - 296
Target Start/End: Complemental strand, 30833743 - 30833670
Alignment:
Q  223 attaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||    
T  30833743 attaatggttaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcatgtccctatatgtatat 30833670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 166 - 256
Target Start/End: Complemental strand, 20202172 - 20202084
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaattt 256  Q
    ||||||||| ||||| |||| |  |||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  20202172 cttgatcaaacatgtaagcact--atgaattgatggaagccgttagattaaaaccgtattaatggctagaatttggtgtcaaatttaattt 20202084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 173 - 296
Target Start/End: Complemental strand, 38798364 - 38798241
Alignment:
Q  173 aagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcat 272  Q
    ||||||| ||||||| |||||||||||| ||  |||  |||||||     |||||||| ||  ||||||||||||||||||||||||||| | |||||||    
T  38798364 aagcatgcgagcattcaatgaattgatgtgaaacgtcggattaaagttgaattaatggttataatttggtgtcaaatttaatttgacaccatagtgtcat 38798265  T
Q  273 ttgatcctatccctatatatatat 296  Q
    |||||||||||| |||||||||||    
T  38798264 ttgatcctatccatatatatatat 38798241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 170 - 279
Target Start/End: Complemental strand, 28908001 - 28907892
Alignment:
Q  170 atcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgt 269  Q
    ||||| ||||||| |||||||||||||| || ||| |||  |||||||     |||||||| ||||||||| ||||||||||||||||||||||| ||||    
T  28908001 atcaaacatgtgaccatttaatgaattgttgagagacgtcggattaaagttggattaatggttaggatttgatgtcaaatttaatttgacaccttagtgt 28907902  T
Q  270 catttgatcc 279  Q
    ||||||||||    
T  28907901 catttgatcc 28907892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 53949605 - 53949550
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  53949605 aataggggtaaatcatgtgcaagagagccctaagaataaacgatgtagaatccttc 53949550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 167 - 285
Target Start/End: Original strand, 28908588 - 28908706
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    ||||||||||||||||||||||||| |||||||| ||  |||   |||||      |||||||| ||| |||| |||||||||||||||||||||||| |    
T  28908588 ttgatcaagcatgtgagcatttaatcaattgatgagaaacgtcgaattaatgttggattaatggttagaattttgtgtcaaatttaatttgacaccttag 28908687  T
Q  267 tgtcatttgatcctatccc 285  Q
    ||| |||||||||||||||    
T  28908688 tgttatttgatcctatccc 28908706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 30834425 - 30834497
Alignment:
Q  223 attaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||| ||||||||  ||||||||||||||||| |||||| |||||||||||||||| |||||||||||||    
T  30834425 attaatggttaggatttaatgtcaaatttaatttgataccttgatgtcatttgatcctat-cctatatatatat 30834497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 255
Target Start/End: Original strand, 24485893 - 24485981
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatt 255  Q
    |||||||| ||||| | || ||||||||||||||| | ||||||||||||||  ||||||||| ||| ||||| |||||||||||||||    
T  24485893 ttgatcaaacatgtaaccacttaatgaattgatggaaaccgttagattaaaattatattaatgactatgatttagtgtcaaatttaatt 24485981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 11239893 - 11239952
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatat 294  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  11239893 gatttggtgtcatatttaatttgacaccttggtgttatttgatcctaaccctacatatat 11239952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 22259569 - 22259631
Alignment:
Q  235 gatttggtgtcaaa-tttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||| ||||||||||||||||| ||| |||||||||||| |||||||||||||    
T  22259569 gatttggtgtcaaaatttaatttgacaccttgatgttatttgatcctattcctatatatatat 22259631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 46889271 - 46889332
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||| | | ||||||||| |||||||||||||||||| ||||||||||||||    
T  46889271 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaaccctatatatatat 46889332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 54584275 - 54584218
Alignment:
Q  239 tggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||| ||||||||| | ||||||||||||| |||||||||||||||||    
T  54584275 tggtgtcaaatttagtttgacaccatagtgtcatttgatcatatccctatatatatat 54584218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 20200132 - 20200077
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    |||| ||||||||||||||||||||| ||||||||| |||| ||||||||||||||    
T  20200132 aataagggtaaatcatgtgcaagagaaccctaagaataaacgatgtagaatccttc 20200077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 20202316 - 20202261
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    |||| ||||||||||||||||||||| ||||||||| |||| ||||||||||||||    
T  20202316 aataagggtaaatcatgtgcaagagaaccctaagaataaacgatgtagaatccttc 20202261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 167 - 262
Target Start/End: Complemental strand, 41709637 - 41709542
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacacc 262  Q
    |||||||| |||||||| |||||||||||||||| ||| ||| | ||||||     |||||||| || ||||||||||||||||| ||||||||||    
T  41709637 ttgatcaaacatgtgagtatttaatgaattgatgagagacgtcatattaaagttggattaatggttatgatttggtgtcaaatttgatttgacacc 41709542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 296
Target Start/End: Original strand, 46915722 - 46915793
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    ||||| || |||||||||||||| | | ||||||||| |||||||||||||||||||||| |||||||||||    
T  46915722 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatatatat 46915793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 226 - 296
Target Start/End: Original strand, 7253263 - 7253332
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||| || |||||||||||| ||||||||||||||| ||||||||||||||| ||| | |||||||||||    
T  7253263 aatggataagatttggtgtcacatttaatttgacaccatggtgtcatttgatcttat-catatatatatat 7253332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 50801892 - 50801822
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||| || |||| ||||||||| | | ||||||||| ||||||||||||||| |||||||||||||||||    
T  50801892 aatggataagattcggtgtcaaactaattttgacaccatggtgtcatttgatcatatccctatatatatat 50801822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 226 - 296
Target Start/End: Original strand, 50873988 - 50874058
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||| || |||| ||||||||| | | ||||||||| ||||||||||||||| |||||||||||||||||    
T  50873988 aatggataagattcggtgtcaaactaattttgacaccatggtgtcatttgatcatatccctatatatatat 50874058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 54584885 - 54584947
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    |||||| ||| ||||||| ||||||||| |||||||||||||||||||||| |||||||||||    
T  54584885 gatttgatgttaaatttagtttgacaccatggtgtcatttgatcctatcccatatatatatat 54584947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 296
Target Start/End: Complemental strand, 16302682 - 16302621
Alignment:
Q  236 atttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    ||||||||||||| | | ||||||||| |||||||||||||||||||||| |||||||||||    
T  16302682 atttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatatatat 16302621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 16303394 - 16303455
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||| | | ||||||||| || ||||||||||||||| ||||||||||||||    
T  16303394 gatttggtgtcaaactaattttgacaccatgatgtcatttgatcctaaccctatatatatat 16303455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 235 - 295
Target Start/End: Complemental strand, 46915021 - 46914962
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatata 295  Q
    |||||||||||||| | | ||||||||| |||||||||||||||||||||| |||||||||    
T  46915021 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccc-atatatata 46914962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 283
Target Start/End: Complemental strand, 11238911 - 11238864
Alignment:
Q  236 atttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc 283  Q
    ||||||||||| ||||||||||||||||| ||||||||||||| ||||    
T  11238911 atttggtgtcacatttaatttgacaccttagtgtcatttgatcttatc 11238864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 37987168 - 37987227
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc 285  Q
    ||||| || |||||||||||||| | | ||||||||| ||||||||||||||||||||||    
T  37987168 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccc 37987227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 226 - 283
Target Start/End: Complemental strand, 46888535 - 46888478
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc 283  Q
    ||||| || |||||||||||||| | | ||||||||| ||||||||||||||||||||    
T  46888535 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatc 46888478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 47168955 - 47169003
Alignment:
Q  25 gggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatcctt 74  Q
    |||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  47168955 gggtaactcatgtgcaagagagccctaagaataaac-atgtagaatcctt 47169003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 295
Target Start/End: Original strand, 50802594 - 50802653
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatata 295  Q
    |||||||||||||| | | ||||||||| |||||||| ||||||||||||| |||||||||    
T  50802594 gatttggtgtcaaactaattttgacaccatggtgtcaattgatcctatccc-atatatata 50802653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 295
Target Start/End: Complemental strand, 50873283 - 50873224
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatata 295  Q
    |||||||||||||| | | ||||||||| |||||||| ||||||||||||| |||||||||    
T  50873283 gatttggtgtcaaactaattttgacaccatggtgtcaattgatcctatccc-atatatata 50873224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 5531952 - 5532010
Alignment:
Q  235 gatttggtgtcaaa-tttaatttgacaccttggtgtcatttgatcctatccctatatata 293  Q
    |||||||||||||| ||||||| |||| ||| ||||||||||||||||| ||||||||||    
T  5531952 gatttggtgtcaaaatttaattcgacatcttagtgtcatttgatcctat-cctatatata 5532010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 47168140 - 47168097
Alignment:
Q  25 gggtaaatcatgtgcaagagagccctaagaagaaacaatgtaga 68  Q
    |||||||||||||||||||||| |||||||| |||| |||||||    
T  47168140 gggtaaatcatgtgcaagagagtcctaagaataaacgatgtaga 47168097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 285
Target Start/End: Original strand, 16854648 - 16854698
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc 285  Q
    |||||||||||||| | | ||||||||| || |||||||||||||||||||    
T  16854648 gatttggtgtcaaactaattttgacaccatgatgtcatttgatcctatccc 16854698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 200
Target Start/End: Original strand, 51829426 - 51829456
Alignment:
Q  170 atcaagcatgtgagcatttaatgaattgatg 200  Q
    |||||||||||||||||||||||||||||||    
T  51829426 atcaagcatgtgagcatttaatgaattgatg 51829456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 200
Target Start/End: Original strand, 30834369 - 30834402
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatg 200  Q
    ||||||||||||||||| ||||||||||||||||    
T  30834369 ttgatcaagcatgtgagtatttaatgaattgatg 30834402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 37986464 - 37986415
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatcc 284  Q
    |||||||||||||| | | ||||||||| ||||||||||||||| |||||    
T  37986464 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcttatcc 37986415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 260
Target Start/End: Complemental strand, 53948457 - 53948420
Alignment:
Q  223 attaatggctaggatttggtgtcaaatttaatttgaca 260  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  53948457 attaatggttaggatttcgtgtcaaatttaatttgaca 53948420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 282
Target Start/End: Original strand, 13644117 - 13644173
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctat 282  Q
    ||||| || |||||||||||||| | | ||||||||| |||| ||||||||||||||    
T  13644117 aatggataagatttggtgtcaaactaattttgacaccatggtatcatttgatcctat 13644173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 2e-53; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 170 - 296
Target Start/End: Complemental strand, 5496660 - 5496534
Alignment:
Q  170 atcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgt 269  Q
    |||| ||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5496660 atcaggcatgtgagcacttaatgaattgatgggagccgttatattaaaaccgtattaatggctagaatttggtgtcaaatttaatttgacaccttggtgt 5496561  T
Q  270 catttgatcctatccctatatatatat 296  Q
    |||||||||||||||||||||||||||    
T  5496560 catttgatcctatccctatatatatat 5496534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 166 - 290
Target Start/End: Original strand, 39848814 - 39848938
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||| ||||||| || ||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  39848814 cttgatcaagcatgtgagcacttaatgagtttatgagagccgttagattaaaactgtattaatggctaggatttggtgtcaaatttaatttgacaccttg 39848913  T
Q  266 gtgtcatttgatcctatccctatat 290  Q
    |||||||||||||||||||||||||    
T  39848914 gtgtcatttgatcctatccctatat 39848938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 166 - 286
Target Start/End: Original strand, 7012972 - 7013092
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||| | ||||| || || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7012972 cttgatcaagcatgtgagcactcaatgagtttatcggagccgttagattaaaaccgtattaatggctaggatttggtgtcaaatttaatttgacaccttg 7013071  T
Q  266 gtgtcatttgatcctatccct 286  Q
    |||||||||||||||||||||    
T  7013072 gtgtcatttgatcctatccct 7013092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 166 - 285
Target Start/End: Original strand, 47374780 - 47374899
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||| |||||||||| ||  ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  47374780 cttgatcaagcatgtgagcacttaatgaattaataagagccgttagattaaaacagtattaatggctaggatttggtgtcaaatttaatttgacaccttg 47374879  T
Q  266 gtgtcatttgatcctatccc 285  Q
    ||||||||||||||||||||    
T  47374880 gtgtcatttgatcctatccc 47374899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 42987019 - 42987149
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    ||||||||||||||||| || |||||||||||||| || || |||||||||||| |||||||||| ||||||||| |||||||||||||||||||| |||    
T  42987019 cttgatcaagcatgtgaacacttaatgaattgatgtgaacctttagattaaaactatattaatggttaggatttgatgtcaaatttaatttgacactttg 42987118  T
Q  266 gtgtcatttgatcctatccctatatatatat 296  Q
    || ||||||||||||||||||||||||||||    
T  42987119 gtatcatttgatcctatccctatatatatat 42987149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 167 - 296
Target Start/End: Complemental strand, 21790868 - 21790739
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    ||||||||||||||||| |||||||||||||||| ||| ||||||||||||     |||||||| || ||||||||||||||||||||||||||||||||    
T  21790868 ttgatcaagcatgtgagaatttaatgaattgatgagagacgttagattaaagttggattaatggttatgatttggtgtcaaatttaatttgacaccttgg 21790769  T
Q  267 tgtcatttgatcctatccctatatatatat 296  Q
    ||||||||||||||||||||||||||||||    
T  21790768 tgtcatttgatcctatccctatatatatat 21790739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 166 - 286
Target Start/End: Complemental strand, 7012083 - 7011963
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||| ||||||| || |||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |    
T  7012083 cttgatcaagcatgtgagcacttaatgagtttatgggagccgttagattaaacccgaattaatggctaggatttggtgtcaaatttaatttgacacctcg 7011984  T
Q  266 gtgtcatttgatcctatccct 286  Q
    ||||||||||||| |||||||    
T  7011983 gtgtcatttgatcatatccct 7011963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 39847926 - 39847798
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    ||||||||||||||||| || ||||||| || ||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||    
T  39847926 cttgatcaagcatgtgaacacttaatgagtttatgagagccgttagattaaaaccgtattaatgactaggatttggtgtcaaatttaatttgaca-cttg 39847828  T
Q  266 gtgtcatttgatcctatccctatatatatat 296  Q
    ||||||||||||||||| |||||||||||||    
T  39847827 gtgtcatttgatcctat-cctatatatatat 39847798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 167 - 296
Target Start/End: Complemental strand, 14886270 - 14886141
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    |||||||||||||||||||||||||||||||||| ||| ||| ||||||||     |||||||| || ||||||||||||||||| |||||||||| |||    
T  14886270 ttgatcaagcatgtgagcatttaatgaattgatgagagacgtcagattaaagttggattaatggttatgatttggtgtcaaatttgatttgacaccatgg 14886171  T
Q  267 tgtcatttgatcctatccctatatatatat 296  Q
    ||||||||||||||||||||||||||||||    
T  14886170 tgtcatttgatcctatccctatatatatat 14886141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 166 - 295
Target Start/End: Original strand, 10716862 - 10716999
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttgg-------tgtcaaatttaatttga 258  Q
    |||||||||||||||||||| |||||||||||||| |||| ||||||||||||   ||||||||||||||||||||       |||||||||||||||||    
T  10716862 cttgatcaagcatgtgagcacttaatgaattgatgcgagctgttagattaaaaaggtattaatggctaggatttggtgtcaaatgtcaaatttaatttga 10716961  T
Q  259 caccttggtgtcatttgatcctatccc-tatatatata 295  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  10716962 caccttggtgtcatttgatcttatcccatatatatata 10716999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 167 - 296
Target Start/End: Original strand, 16960064 - 16960194
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    ||||||||||||||||||||||||||||||||||  || |||| |||||||     |||||||| || |||||||||||||||||||||||||||| ||     
T  16960064 ttgatcaagcatgtgagcatttaatgaattgatgatagacgttggattaaagttgaattaatggttatgatttggtgtcaaatttaatttgacaccatga 16960163  T
Q  267 tgtcatttgatcctatccc-tatatatatat 296  Q
    ||||||||||||||||||| |||||||||||    
T  16960164 tgtcatttgatcctatcccatatatatatat 16960194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 178 - 296
Target Start/End: Complemental strand, 29859029 - 29858911
Alignment:
Q  178 tgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgat 277  Q
    |||||| |||||||||||||||| ||| ||||||||||||     |||||||| || |||||||||||||||||||||||||| ||||||||||||||||    
T  29859029 tgtgagaatttaatgaattgatgcgagacgttagattaaagttggattaatggttatgatttggtgtcaaatttaatttgacatcttggtgtcatttgat 29858930  T
Q  278 cctatccctatatatatat 296  Q
    ||||||| |||||||||||    
T  29858929 cctatccatatatatatat 29858911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 171 - 287
Target Start/End: Original strand, 14886771 - 14886887
Alignment:
Q  171 tcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtc 270  Q
    |||||||||||| ||||||||||||||||| ||| |||| |||||||     |||||||| || |||||||||||||||||||||||||||| |||||||    
T  14886771 tcaagcatgtgaacatttaatgaattgatgagagacgttggattaaagttgaattaatggttatgatttggtgtcaaatttaatttgacaccatggtgtc 14886870  T
Q  271 atttgatcctatcccta 287  Q
    |||||||||||||||||    
T  14886871 atttgatcctatcccta 14886887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 167 - 278
Target Start/End: Complemental strand, 47052462 - 47052351
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    |||||||||||||||||||||||||||||||||| ||| |||| |||||||     |||||||| || |||||||||||||||||||||||||||| |||    
T  47052462 ttgatcaagcatgtgagcatttaatgaattgatgagagacgttggattaaagttgaattaatggttatgatttggtgtcaaatttaatttgacaccatgg 47052363  T
Q  267 tgtcatttgatc 278  Q
    ||||||||||||    
T  47052362 tgtcatttgatc 47052351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 167 - 296
Target Start/End: Original strand, 2271272 - 2271401
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    |||||||||||||||| ||| ||||||||||||| | | |||  |||||||     |||||||| |||||||| ||||||||||||||||||||| ||||    
T  2271272 ttgatcaagcatgtgaacatctaatgaattgatgagggacgtcggattaaagttggattaatggttaggatttagtgtcaaatttaatttgacacattgg 2271371  T
Q  267 tgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||| |||||||||||||||||    
T  2271372 tgtcatttgatcatatccctatatatatat 2271401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 171 - 296
Target Start/End: Complemental strand, 16959616 - 16959492
Alignment:
Q  171 tcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtc 270  Q
    |||| |||||||||||||||||| |||||| ||| ||| ||||||||     |||||||| |||||||| |||||||||||||||||||||||||||||     
T  16959616 tcaaacatgtgagcatttaatgatttgatgagagacgtcagattaaagtgg-attaatggttaggatttagtgtcaaatttaatttgacaccttggtgtt 16959518  T
Q  271 atttgatcctatccctatatatatat 296  Q
    |||||||||||||| |||||||||||    
T  16959517 atttgatcctatccttatatatatat 16959492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 167 - 295
Target Start/End: Complemental strand, 46284872 - 46284743
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    |||||||||||||| |||||||||||||||| || ||| |||  |||||||     |||||||| ||||||||| |||||||||||||||||||| ||||    
T  46284872 ttgatcaagcatgtaagcatttaatgaattgttgagagacgtcggattaaagttggattaatggttaggatttgatgtcaaatttaatttgacactttgg 46284773  T
Q  267 tgtcatttgatcctatccc-tatatatata 295  Q
    ||||||||||||||||||| ||||||||||    
T  46284772 tgtcatttgatcctatcccatatatatata 46284743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 193 - 296
Target Start/End: Complemental strand, 26213010 - 26212906
Alignment:
Q  193 aattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatata 291  Q
    |||||||  |||||||| ||||||||| |||||||||| || ||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||    
T  26213010 aattgattagagccgttggattaaaactatattaatggataagatttggtgtcaaattttatttgacaccttagtgtcatttgatcctatcccatatata 26212911  T
Q  292 tatat 296  Q
    |||||    
T  26212910 tatat 26212906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 173 - 296
Target Start/End: Complemental strand, 5216673 - 5216550
Alignment:
Q  173 aagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcat 272  Q
    |||||||||| ||||||||||||||| ||||| |||  ||||||      |||||||| || |||||||| ||||||||||||||||||| |||||||||    
T  5216673 aagcatgtgaacatttaatgaattgacgggagacgtcggattaaggttgaattaatggttaagatttggtatcaaatttaatttgacaccatggtgtcat 5216574  T
Q  273 ttgatcctatccctatatatatat 296  Q
    ||||||||||||||||||||||||    
T  5216573 ttgatcctatccctatatatatat 5216550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 48302130 - 48302249
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    |||||||| ||||||||||||||||||||||||| ||| ||| ||||||||     |||||||| || | |||||||||||||||||||||||||| |||    
T  48302130 ttgatcaaacatgtgagcatttaatgaattgatgagagacgtgagattaaagttggattaatggttatggtttggtgtcaaatttaatttgacaccatgg 48302229  T
Q  267 tgtcatttgatcctatccct 286  Q
    ||||||||||| ||||||||    
T  48302230 tgtcatttgattctatccct 48302249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 173 - 290
Target Start/End: Original strand, 27652044 - 27652161
Alignment:
Q  173 aagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcat 272  Q
    |||||||||||||||||||||||||||| ||  |||  |||||||     |||||||| || |||||||||||||||||||||||||||| |||||||||    
T  27652044 aagcatgtgagcatttaatgaattgatgagaaacgtcggattaaagttgaattaatggttatgatttggtgtcaaatttaatttgacaccatggtgtcat 27652143  T
Q  273 ttgatcctatccctatat 290  Q
    ||||||| ||||||||||    
T  27652144 ttgatcccatccctatat 27652161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 10716790 - 10716698
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttga 258  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||  ||| ||||||||| |||||| ||||||    
T  10716790 cttgatcaagcatgtgagcacttaatgaattgatgggagccgttagattaaaatcgtattaatgattagaatttggtgttaaatttcatttga 10716698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 173 - 297
Target Start/End: Original strand, 21791425 - 21791548
Alignment:
Q  173 aagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcat 272  Q
    |||||||||| ||||||||||||||| ||||| |||  ||||||      |||||||| || |||||||||||||||||||||||||||| |||||||||    
T  21791425 aagcatgtgaacatttaatgaattgacgggagacgtcggattaaggttgaattaatggttaagatttggtgtcaaatttaatttgacaccatggtgtcat 21791524  T
Q  273 ttgatcctatccctatatatatatt 297  Q
    ||||||||||||| |||||||||||    
T  21791525 ttgatcctatccc-atatatatatt 21791548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 167 - 283
Target Start/End: Complemental strand, 42986874 - 42986758
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    |||||||| |||||||||| |||||||||| ||| ||||| ||||||||||    |||||||| ||| |||||||||||||||||||||| ||| |||||    
T  42986874 ttgatcaaacatgtgagcacttaatgaattaatgagagccattagattaaatgagtattaatgactaagatttggtgtcaaatttaattttacatcttgg 42986775  T
Q  267 tgtcatttgatcctatc 283  Q
    |||||||||||| ||||    
T  42986774 tgtcatttgatcatatc 42986758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 223 - 291
Target Start/End: Original strand, 46285540 - 46285608
Alignment:
Q  223 attaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatata 291  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  46285540 attaatggttaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcatatccctatata 46285608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 47374163 - 47374083
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtca 246  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||||||  ||||||||||||| |||||||||||    
T  47374163 cttgatcaagcatgtgagcacttaatgaattgatggaagccgttagattaaaactgtattaatggctagaatttggtgtca 47374083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 222 - 296
Target Start/End: Original strand, 5497280 - 5497355
Alignment:
Q  222 tattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc-cctatatatatat 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||    
T  5497280 tattaatggctaggatttggtgtcaaatttaatttgacaccttggtatcatttgatcctatctcatatatatatat 5497355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 167 - 296
Target Start/End: Original strand, 26897072 - 26897201
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    |||||||||||| |||| |||||||||||||||| ||| ||| ||||||||     |||||||| || ||||||||||||||||| |||||||| | |||    
T  26897072 ttgatcaagcatatgagtatttaatgaattgatgagagacgtcagattaaagttggattaatggttatgatttggtgtcaaatttgatttgacatcatgg 26897171  T
Q  267 tgtcatttgatcctatccctatatatatat 296  Q
    ||||||||||||||||   |||||||||||    
T  26897172 tgtcatttgatcctatatatatatatatat 26897201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 177 - 296
Target Start/End: Complemental strand, 27651440 - 27651320
Alignment:
Q  177 atgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttga 276  Q
    |||||||||||||||||||||||| ||| |||  |||||||     |||||||| || ||||| |||||||||||||||||||||| |||||||||||||    
T  27651440 atgtgagcatttaatgaattgatgagagacgtcggattaaagttgaattaatggttatgatttagtgtcaaatttaatttgacaccatggtgtcatttga 27651341  T
Q  277 tcctatccc-tatatatatat 296  Q
    || |||||| |||||||||||    
T  27651340 tcatatcccatatatatatat 27651320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 17606302 - 17606252
Alignment:
Q  246 aaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17606302 aaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 17606252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 26213602 - 26213663
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||||  |||||||||||||||||||| |||||| |||||||||||||||||    
T  26213602 gatttggtgtcaaataaaatttgacaccttggtgtcaattgatcttatccctatatatatat 26213663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 5497110 - 5497165
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    |||||||||||||||||||||||| ||||||||||| |||| ||||||||||||||    
T  5497110 aataggggtaaatcatgtgcaagatagccctaagaataaacgatgtagaatccttc 5497165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 16317611 - 16317541
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||| || |||||||| ||| ||||||||||||||| || |||||||||||| |||||||||||||||||    
T  16317611 aatggataagatttggtctcacatttaatttgacaccatgatgtcatttgatcttatccctatatatatat 16317541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 31150737 - 31150667
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||| || |||||||||||||| | | ||||||||| | |||||||||||||||||||||||||||||||    
T  31150737 aatggataagatttggtgtcaaactaattttgacaccattgtgtcatttgatcctatccctatatatatat 31150667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 48644836 - 48644897
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||| | | ||||||||| |||||||||||||||||| ||||||||||||||    
T  48644836 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctaaccctatatatatat 48644897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 51445583 - 51445507
Alignment:
Q  170 atcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtca 246  Q
    |||||||||||||||| |||| ||||||||   ||||||||||||||||  |||||||||| || ||||||||||||    
T  51445583 atcaagcatgtgagcacttaacgaattgattaaagccgttagattaaaattatattaatggataagatttggtgtca 51445507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 7012230 - 7012176
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||    
T  7012230 aataggggtaactcatgtgcaagagagccctaagaataaac-atgtagaatccttc 7012176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 296
Target Start/End: Original strand, 23602434 - 23602505
Alignment:
Q  226 aatggctaggatttggtgtcaaat-ttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||| || ||||||||||||||  ||| ||||||||| |||||||||||||||||| ||||||||||||||    
T  23602434 aatggataagatttggtgtcaaaaattagtttgacaccatggtgtcatttgatcctaaccctatatatatat 23602505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 39848670 - 39848724
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||    
T  39848670 aataggggtaactcatgtgcaagagagccctaagaataaac-atgtagaatccttc 39848724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 47374636 - 47374691
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    |||||||||||||||||||||| ||| ||||||||| |||| ||||||||||||||    
T  47374636 aataggggtaaatcatgtgcaaaagaaccctaagaataaacgatgtagaatccttc 47374691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 7012826 - 7012879
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatcctt 74  Q
    ||||||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  7012826 aataggggtaactcatgtgcaagagagccctaagaataaac-atgtagaatcctt 7012879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 285
Target Start/End: Complemental strand, 24081504 - 24081454
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc 285  Q
    |||||||||||||||| | ||||||||| ||||||||||||||||||||||    
T  24081504 gatttggtgtcaaattaattttgacaccatggtgtcatttgatcctatccc 24081454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 26896586 - 26896536
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaa 217  Q
    |||||||||||||||||||||||||||||||||| ||| |||| |||||||    
T  26896586 ttgatcaagcatgtgagcatttaatgaattgatgagagacgttggattaaa 26896536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 167 - 261
Target Start/End: Complemental strand, 44233325 - 44233231
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacac 261  Q
    ||||||||||||||||||||||||| |||||||| ||| ||| ||||||||     |||||| | ||| ||||| ||||||||||||||| ||||    
T  44233325 ttgatcaagcatgtgagcatttaataaattgatgagagacgtcagattaaagttggattaattgttagaatttgatgtcaaatttaatttaacac 44233231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 226 - 295
Target Start/End: Original strand, 48577552 - 48577622
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatata 295  Q
    ||||| || |||||||||||||| | | ||||||||| |||||||||||||||||||||| ||||||||||    
T  48577552 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatatata 48577622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 4595581 - 4595642
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||| | | ||||||||| ||||||||||||||||||||||  |||||||||    
T  4595581 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccattatatatat 4595642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 39870113 - 39870052
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||| | | ||||||||| ||| |||||||||||||| ||||||||||||||    
T  39870113 gatttggtgtcaaactaattttgacaccatggcgtcatttgatcctaaccctatatatatat 39870052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 167 - 286
Target Start/End: Complemental strand, 48301984 - 48301866
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    |||||||||||||||||||||||| ||||||||| ||| | | ||||||||     |||||||  || ||||  || || |||||||||||||| | |||    
T  48301984 ttgatcaagcatgtgagcatttaacgaattgatgagagacatcagattaaagtttaattaatgattatgattatgtatc-aatttaatttgacaacatgg 48301886  T
Q  267 tgtcatttgatcctatccct 286  Q
    |||||||||||| |||||||    
T  48301885 tgtcatttgatcatatccct 48301866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 74
Target Start/End: Complemental strand, 39848068 - 39848014
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatcctt 74  Q
    ||||||||||||||||||||||||||| |||||||| |||| | ||||| |||||    
T  39848068 aataggggtaaatcatgtgcaagagagtcctaagaataaacgacgtagagtcctt 39848014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 39870816 - 39870878
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc-cctatatatatat 296  Q
    |||||||||||||| | ||||||||||| ||||||||||||||| |||| | |||||||||||    
T  39870816 gatttggtgtcaaactaaatttgacaccatggtgtcatttgatcatatctcatatatatatat 39870878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 235 - 285
Target Start/End: Original strand, 40959777 - 40959827
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc 285  Q
    |||||||||||||| | | ||||||||| ||||||||||||||||||||||    
T  40959777 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccc 40959827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 236 - 285
Target Start/End: Complemental strand, 4594755 - 4594706
Alignment:
Q  236 atttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc 285  Q
    ||||||||||||| | | ||||||||| ||||||||||||||||||||||    
T  4594755 atttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccc 4594706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 29859602 - 29859639
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggag 204  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  29859602 ttgatcatgcatgtgagcatttaatgaattgatgggag 29859639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 51661362 - 51661422
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||| | | ||||||||| ||||||||||||||||||  |||||||||||||    
T  51661362 gatttggtgtcaaactaattttgacaccatggtgtcatttgatccta-acctatatatatat 51661422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 23601795 - 23601740
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatccta 281  Q
    ||||| || |||||||||||||| | | ||||||||| ||||||||||||||||||    
T  23601795 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatccta 23601740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 234 - 285
Target Start/End: Complemental strand, 40958938 - 40958887
Alignment:
Q  234 ggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc 285  Q
    ||||||||||||||| | | ||||||||| |||| |||||||||||||||||    
T  40958938 ggatttggtgtcaaactaattttgacaccatggtatcatttgatcctatccc 40958887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 51660663 - 51660592
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttg-gtgtcatttgatcctatccctatatatatat 296  Q
    ||||| || ||||||||| |||| | | ||||||||| || ||||||||||||||||||| |||||||||||    
T  51660663 aatggataagatttggtgacaaactaattttgacaccatgtgtgtcatttgatcctatccatatatatatat 51660592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 281
Target Start/End: Original strand, 23174045 - 23174091
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatccta 281  Q
    |||||||||||||| | | ||||||||| ||||||||||||||||||    
T  23174045 gatttggtgtcaaactaattttgacaccatggtgtcatttgatccta 23174091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 200
Target Start/End: Complemental strand, 6690418 - 6690385
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatg 200  Q
    ||||||||||||||||||||||||| ||||||||    
T  6690418 ttgatcaagcatgtgagcatttaataaattgatg 6690385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 31151439 - 31151488
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatcc 284  Q
    |||||||||||||| | | ||||| ||| |||||||||||||||||||||    
T  31151439 gatttggtgtcaaactaattttgataccatggtgtcatttgatcctatcc 31151488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 200
Target Start/End: Original strand, 46285484 - 46285517
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatg 200  Q
    |||||||||||| |||||||||||||||||||||    
T  46285484 ttgatcaagcatttgagcatttaatgaattgatg 46285517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 103; Significance: 4e-51; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 166 - 296
Target Start/End: Original strand, 106226 - 106356
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||  || ||||||||| ||||||||||||||||||||||||||||||||||    
T  106226 cttgatcaagcatgtgagcacttaatgaattgatgggcgccgttagattaagcccgtattaatggttaggatttggtgtcaaatttaatttgacaccttg 106325  T
Q  266 gtgtcatttgatcctatccctatatatatat 296  Q
    ||||||||||||| |||||||||||||||||    
T  106326 gtgtcatttgatcatatccctatatatatat 106356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 166 - 297
Target Start/End: Complemental strand, 105629 - 105497
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||    
T  105629 cttgatcaagcatgtgaacacataatgaattgatgggagccgttagattaaaaccgtattaatggttaagatttggtgtcaaatttaatttgacaccttg 105530  T
Q  266 gtgtcatttgatcctatccc-tatatatatatt 297  Q
    |||||||||||||||||||| ||||||||||||    
T  105529 gtgtcatttgatcctatcccatatatatatatt 105497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 105777 - 105722
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  105777 aataggggtaaatcatgtgcaagagagccctaagaataaacgatgtagaatccttc 105722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 99; Significance: 9e-49; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 25733 - 25603
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    ||||||||||||||||| || |||||||||||||| ||| ||||||||||||||  ||||||||||| |||||||||||||||||||||||||||| |||    
T  25733 cttgatcaagcatgtgaacacttaatgaattgatgagagacgttagattaaaactgtattaatggctgggatttggtgtcaaatttaatttgacacattg 25634  T
Q  266 gtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||||||||||||||||||||    
T  25633 gtgtcatttgatcctatccctatatatatat 25603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 25881 - 25826
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    ||||||||||||||||||| |||| ||||||||||| |||| ||||||||||||||    
T  25881 aataggggtaaatcatgtgtaagaaagccctaagaataaacgatgtagaatccttc 25826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 88; Significance: 3e-42; HSPs: 4)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 178 - 296
Target Start/End: Complemental strand, 722 - 603
Alignment:
Q  178 tgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgat 277  Q
    |||||||| ||||||| || ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  722 tgtgagcacttaatgagtttatgggagccgttagattaaaaccgtattaatggctaggatctggtgtcaaatttaatttgacacattggtgtcatttgat 623  T
Q  278 cctatccc-tatatatatat 296  Q
    |||||||| |||||||||||    
T  622 cctatcccatatatatatat 603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 2261 - 2315
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaacc 220  Q
    |||||||||||||||||||| ||||||| || |||| ||||||||||||||||||    
T  2261 cttgatcaagcatgtgagcacttaatgagtttatggaagccgttagattaaaacc 2315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 876 - 822
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    ||||||||||| ||||||||||||||||||| | || |||| ||||||||||||||    
T  876 aataggggtaactcatgtgcaagagagccctgaaaataaac-atgtagaatccttc 822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 2118 - 2173
Alignment:
Q  20 aataggggtaaatcatgtgcaagagagccctaagaagaaacaatgtagaatccttc 75  Q
    |||| |||||||||||||||||||||| |||||||| |||| || |||| ||||||    
T  2118 aataagggtaaatcatgtgcaagagagtcctaagaataaacgatttagagtccttc 2173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 3e-36; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 167 - 296
Target Start/End: Complemental strand, 8993025 - 8992896
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    ||||||||||||||||| |||||||||||||||| ||| |||| |||||||     |||||||| || ||||| |||||||||||||||||||||| |||    
T  8993025 ttgatcaagcatgtgagtatttaatgaattgatgagagacgttggattaaagttgaattaatggttatgatttagtgtcaaatttaatttgacaccatgg 8992926  T
Q  267 tgtcatttgatcctatccctatatatatat 296  Q
    ||||||||||||||||||||||||||||||    
T  8992925 tgtcatttgatcctatccctatatatatat 8992896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 167 - 296
Target Start/End: Complemental strand, 9017472 - 9017343
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    ||||||||||||||||| |||||||||||||||| ||| |||| |||||||     |||||||| || ||||| |||||||||||||||||||||| |||    
T  9017472 ttgatcaagcatgtgagtatttaatgaattgatgagagacgttggattaaagttgaattaatggttatgatttagtgtcaaatttaatttgacaccatgg 9017373  T
Q  267 tgtcatttgatcctatccctatatatatat 296  Q
    ||||||||||||||||||||||||||||||    
T  9017372 tgtcatttgatcctatccctatatatatat 9017343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 173 - 285
Target Start/End: Complemental strand, 18153370 - 18153258
Alignment:
Q  173 aagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcat 272  Q
    |||||||||| |  |||||||||| ||| || ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  18153370 aagcatgtgaacgcttaatgaatttatgcgaaccgttagattaaaactatattaatggttaggatttggtgtcaaatttaatttgacactttggtgtcat 18153271  T
Q  273 ttgatcctatccc 285  Q
    |||||||||||||    
T  18153270 ttgatcctatccc 18153258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 167 - 296
Target Start/End: Original strand, 19653802 - 19653932
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    ||||| || ||| ||||||||||||||||||||| ||| ||| ||||||||     |||||||| |||||||||||||||||||||||||||||||||||    
T  19653802 ttgattaaacatatgagcatttaatgaattgatgagagacgtcagattaaagttggattaatggttaggatttggtgtcaaatttaatttgacaccttgg 19653901  T
Q  267 tgtcatttgatcctatccc-tatatatatat 296  Q
    ||||||||||||||||||| |||||||||||    
T  19653902 tgtcatttgatcctatcccatatatatatat 19653932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 173 - 295
Target Start/End: Original strand, 18649842 - 18649964
Alignment:
Q  173 aagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcat 272  Q
    ||||||||||||||| |||||||||||| ||| |||  |||||||     |||||||| || |||||||||||||||||||||||||||| |||||||||    
T  18649842 aagcatgtgagcattcaatgaattgatgagagacgtcggattaaagttgaattaatggttatgatttggtgtcaaatttaatttgacaccatggtgtcat 18649941  T
Q  273 ttgatcctatccctatatatata 295  Q
    |||||||||||||||||||||||    
T  18649942 ttgatcctatccctatatatata 18649964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 175 - 288
Target Start/End: Complemental strand, 19651181 - 19651068
Alignment:
Q  175 gcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcattt 274  Q
    |||||||||||||||||||||| ||| ||| ||| ||||||||     |||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  19651181 gcatgtgagcatttaatgaattaatgagagacgtcagattaaagttggattaatgattaggatttggtgtcaaatttaatttgacaccttggtgtcattt 19651082  T
Q  275 gatcctatccctat 288  Q
    ||||||||||||||    
T  19651081 gatcctatccctat 19651068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 167 - 296
Target Start/End: Original strand, 8993522 - 8993650
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    |||||||| ||||||||||||||| |||| |||| ||| |||| |||||||     |||||||| || |||||||||||||||||||||||||||| |||    
T  8993522 ttgatcaaacatgtgagcatttaaagaatggatgagagacgttggattaaagttgaattaatggttatgatttggtgtcaaatttaatttgacaccgtgg 8993621  T
Q  267 tgtcatttgatcctatccctatatatatat 296  Q
    ||||||||||||||||||| ||||||||||    
T  8993622 tgtcatttgatcctatccc-atatatatat 8993650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 167 - 296
Target Start/End: Original strand, 9017969 - 9018097
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    |||||||| ||||||||||||||| |||| |||| ||| |||| |||||||     |||||||| || |||||||||||||||||||||||||||| |||    
T  9017969 ttgatcaaacatgtgagcatttaaagaatggatgagagacgttggattaaagttgaattaatggttatgatttggtgtcaaatttaatttgacaccgtgg 9018068  T
Q  267 tgtcatttgatcctatccctatatatatat 296  Q
    ||||||||||||||||||| ||||||||||    
T  9018069 tgtcatttgatcctatccc-atatatatat 9018097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 173 - 288
Target Start/End: Complemental strand, 32907539 - 32907424
Alignment:
Q  173 aagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtcat 272  Q
    |||||||||||| ||||||||||||||||||| ||| |||||||      |||||||| || |||||||||||||||| ||||||||||| |||||||||    
T  32907539 aagcatgtgagcctttaatgaattgatgggagacgtcagattaaggttgaattaatggttaagatttggtgtcaaattaaatttgacaccatggtgtcat 32907440  T
Q  273 ttgatcctatccctat 288  Q
    ||||||||||||||||    
T  32907439 ttgatcctatccctat 32907424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 167 - 283
Target Start/End: Original strand, 9280830 - 9280946
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttgg 266  Q
    ||||||||||||||||| ||||||| |||||||| ||| | ||||||||||     |||||||  | |||||||||||||||||||||||||||| ||||    
T  9280830 ttgatcaagcatgtgagaatttaataaattgatgagagactttagattaaagttggattaatgatttggatttggtgtcaaatttaatttgacacattgg 9280929  T
Q  267 tgtcatttgatcctatc 283  Q
    |||||||||||||||||    
T  9280930 tgtcatttgatcctatc 9280946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 18969170 - 18969100
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||| || |||||||||||||| | | ||||||||| |||||||||||||||||||||||||||||||||    
T  18969170 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccctatatatatat 18969100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 226 - 292
Target Start/End: Original strand, 35073407 - 35073473
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatat 292  Q
    ||||| || |||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||    
T  35073407 aatggataagatttggtgtcacatttaatttgacaccttgatgtcatttgatcttatccctatatat 35073473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 1371058 - 1371119
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||| | | ||||||||| ||||||||||||||||||||| |||||||||||    
T  1371058 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatccatatatatatat 1371119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 18154450 - 18154494
Alignment:
Q  252 aatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  18154450 aatttgacaccttggtgtcatttgatcatatccctatatatatat 18154494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 1370209 - 1370147
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    |||||||||||||| | | ||||||||| |||||||||||||||||||||| |||||||||||    
T  1370209 gatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatatatat 1370147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 19820872 - 19820934
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    |||||||||||||||||| ||| ||||| |||| ||||||||||||||||| |||||||||||    
T  19820872 gatttggtgtcaaatttagtttaacaccatggtatcatttgatcctatcccatatatatatat 19820934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 35072805 - 35072744
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatatt 297  Q
    |||||||||||| |||||||||||||||||| || ||||||||||||  ||||||||||||||    
T  35072805 gatttggtgtcatatttaatttgacaccttgatgccatttgatccta-acctatatatatatt 35072744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 235 - 295
Target Start/End: Original strand, 18969855 - 18969916
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatata 295  Q
    ||||| |||||||| | | ||||||||| |||||||||||||||||||||| ||||||||||    
T  18969855 gatttagtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatatata 18969916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 281
Target Start/End: Original strand, 24063774 - 24063829
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatccta 281  Q
    ||||| || |||||||||||||| | | ||||||||| ||||||||||||||||||    
T  24063774 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatccta 24063829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 18154401 - 18154451
Alignment:
Q  167 ttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaa 217  Q
    |||| ||| |||||||||| ||||||||||||||| | |||||||||||||    
T  18154401 ttgaccaaacatgtgagcacttaatgaattgatggaaaccgttagattaaa 18154451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 166 - 296
Target Start/End: Complemental strand, 20847 - 20718
Alignment:
Q  166 cttgatcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttg 265  Q
    ||||||||| ||||||| || |||||||||| |||  |||| |||||||||||   |||||||||||||||||| |||||||||||||||||||||||||    
T  20847 cttgatcaaacatgtgatcacttaatgaattaatg--agccattagattaaaatagtattaatggctaggatttagtgtcaaatttaatttgacaccttg 20750  T
Q  266 gtgtcatttgatcctatc-cctatatatatat 296  Q
    |||||||||||||||||| | |||||||||||    
T  20749 gtgtcatttgatcctatctcatatatatatat 20718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 71; Significance: 5e-32; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 171 - 296
Target Start/End: Complemental strand, 1112 - 986
Alignment:
Q  171 tcaagcatgtgagcatttaatgaattgatgggagccgttagattaaaaccatattaatggctaggatttggtgtcaaatttaatttgacaccttggtgtc 270  Q
    ||||||||||||||||||||| |||||||| ||| |||| ||||||      |||||||| |||||||||||||||||||||||||||||| ||||||||    
T  1112 tcaagcatgtgagcatttaataaattgatgagagacgttggattaatgttgaattaatggttaggatttggtgtcaaatttaatttgacactttggtgtc 1013  T
Q  271 atttgatcctatccc-tatatatatat 296  Q
    ||||||||||||||| |||||||||||    
T  1012 atttgatcctatcccatatatatatat 986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 39831 - 39892
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||||||| ||||||||  || ||||||||||||||||||||||||||||||    
T  39831 gatttggtgtcaaatttagtttgacacggtgatgtcatttgatcctatccctatatatatat 39892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 22005 - 21944
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||| | | ||||||||| |||| ||||||||||||||||||||||||||||    
T  22005 gatttggtgtcaaactaattttgacaccatggtatcatttgatcctatccctatatatatat 21944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 296
Target Start/End: Complemental strand, 22897 - 22836
Alignment:
Q  235 gatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccctatatatatat 296  Q
    |||||||||||||  ||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  22897 gatttggtgtcaagattaatttgacatcttagtgttatttgatcctatccctatatatatat 22836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 22774 - 22835
Alignment:
Q  236 atttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatc-cctatatatatat 296  Q
    ||||||||||||| | | ||||||||| |||||||||||||||||||| | |||||||||||    
T  22774 atttggtgtcaaactaattttgacaccatggtgtcatttgatcctatctcatatatatatat 22835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 8470 - 8399
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    ||||| || |||||||||||||| | | ||||||||| |||||||||||||||||||||| |||||||||||    
T  8470 aatggataagatttggtgtcaaactaattttgacaccatggtgtcatttgatcctatcccatatatatatat 8399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1339 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1339
Description:

Target: scaffold1339; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 1975 - 1904
Alignment:
Q  226 aatggctaggatttggtgtcaaatttaatttgacaccttggtgtcatttgatcctatccc-tatatatatat 296  Q
    ||||| || |||||||||||||| | | ||||||||| |||||| ||||||||||||||| |||||||||||    
T  1975 aatggataagatttggtgtcaaactaattttgacaccatggtgttatttgatcctatcccatatatatatat 1904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University