View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8800_low_8 (Length: 231)
Name: NF8800_low_8
Description: NF8800
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8800_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 17472454 - 17472632
Alignment:
| Q |
20 |
tctgacactgggacatggttaatgcgagaagtgtctgtgtgcttaagtaagtggttttgagttaggatttgaagctgaaaaacggtatatagtgaatgga |
119 |
Q |
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| T |
17472454 |
tctgacattgggacatgcttaatgcgagaagtgtctgtgtgcttaagtaagtggttttgagttaggatttgaagctgaaaaatggtatatagtgaatgga |
17472553 |
T |
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| Q |
120 |
tgattgttgtcctttaatagctgctgtgaatctgtcatcatcattcatcatttgatttggattttgtgtgttcgtgtgt |
198 |
Q |
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| T |
17472554 |
tgattgttgtcctttaatagctgctgtgaatctgtcatcatcattcatcatttgatttggattttgtgtgtttgtgtgt |
17472632 |
T |
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