View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8801_low_7 (Length: 249)
Name: NF8801_low_7
Description: NF8801
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8801_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 40669993 - 40669762
Alignment:
| Q |
1 |
atcaaagcaagttcaggatttgtatccagaagcttttccgtcatatccaaatacgcaagttctgtcgcttcaagcgcccgcgacattgcattcaaaacca |
100 |
Q |
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| T |
40669993 |
atcaaagcaagttcaggatttgtatccagaagcttttccgtcatatccaaatacgcaagttctgtcgcttcaagcgcccgcgacattgcattcaaaacca |
40669894 |
T |
|
| Q |
101 |
aatcatgatccaccggacccaatttctgcctcctcccaccaccactaccagtgtcagaagcagagggtttgttttccacctcagacttttcttctttctc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40669893 |
aatcatgatccaccggacccaatttctgcctcctcccaccaccactaccagtgtcagaagcagagggtttgttttccacctcagacttttcttctttctc |
40669794 |
T |
|
| Q |
201 |
ttcctgattccccaaattccacggtaacaact |
232 |
Q |
| |
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|||||||||||||||||||||||||||||||| |
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| T |
40669793 |
ttcctgattccccaaattccacggtaacaact |
40669762 |
T |
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