View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8803_low_10 (Length: 205)

Name: NF8803_low_10
Description: NF8803
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8803_low_10
NF8803_low_10
[»] chr4 (66 HSPs)
chr4 (39-188)||(31273473-31273622)
chr4 (44-187)||(5271418-5271561)
chr4 (44-188)||(31268986-31269130)
chr4 (39-188)||(37264558-37264707)
chr4 (36-188)||(55251673-55251823)
chr4 (44-185)||(13521991-13522132)
chr4 (39-188)||(37259871-37260020)
chr4 (44-188)||(8693663-8693807)
chr4 (44-188)||(12823894-12824038)
chr4 (46-156)||(42758756-42758866)
chr4 (44-156)||(12878223-12878335)
chr4 (44-188)||(13059362-13059506)
chr4 (44-185)||(31765837-31765982)
chr4 (39-173)||(16420996-16421130)
chr4 (39-188)||(8030470-8030619)
chr4 (44-188)||(19106571-19106715)
chr4 (44-180)||(33463355-33463491)
chr4 (44-188)||(47244200-47244344)
chr4 (44-172)||(51697885-51698013)
chr4 (39-188)||(5928213-5928362)
chr4 (44-188)||(19101929-19102073)
chr4 (44-188)||(32082090-32082233)
chr4 (44-188)||(33468972-33469116)
chr4 (44-174)||(19906217-19906347)
chr4 (44-179)||(47574586-47574721)
chr4 (59-156)||(1151312-1151409)
chr4 (44-161)||(12874518-12874635)
chr4 (57-156)||(13065780-13065879)
chr4 (44-139)||(31729386-31729481)
chr4 (70-153)||(51696989-51697072)
chr4 (44-150)||(48276648-48276749)
chr4 (44-153)||(19541160-19541269)
chr4 (44-156)||(2819828-2819940)
chr4 (79-148)||(52691089-52691158)
chr4 (42-156)||(4550982-4551095)
chr4 (111-188)||(32221163-32221240)
chr4 (47-150)||(10120811-10120913)
chr4 (64-127)||(16595953-16596015)
chr4 (64-123)||(33722939-33722997)
chr4 (64-124)||(15020485-15020544)
chr4 (64-166)||(32545068-32545171)
chr4 (64-127)||(20513120-20513182)
chr4 (44-118)||(16953107-16953181)
chr4 (45-141)||(653043-653138)
chr4 (65-157)||(6070570-6070662)
chr4 (45-144)||(24490028-24490127)
chr4 (45-144)||(34644554-34644653)
chr4 (57-139)||(8083039-8083121)
chr4 (44-144)||(10318778-10318878)
chr4 (45-141)||(36354176-36354271)
chr4 (45-141)||(36359294-36359389)
chr4 (45-141)||(39999069-39999164)
chr4 (45-141)||(40004027-40004122)
chr4 (45-141)||(53797629-53797724)
chr4 (45-141)||(54348357-54348452)
chr4 (106-144)||(7715136-7715174)
chr4 (106-144)||(39319628-39319666)
chr4 (45-141)||(8980285-8980380)
chr4 (45-141)||(8985405-8985500)
chr4 (45-141)||(13700510-13700605)
chr4 (45-141)||(21299833-21299928)
chr4 (36-112)||(39217372-39217448)
chr4 (45-141)||(41393245-41393340)
chr4 (45-141)||(51019373-51019468)
chr4 (105-141)||(54343203-54343239)
chr4 (45-141)||(54991486-54991581)
[»] chr2 (42 HSPs)
chr2 (39-188)||(1934987-1935136)
chr2 (44-188)||(10160723-10160867)
chr2 (39-188)||(9180718-9180867)
chr2 (39-188)||(9189797-9189946)
chr2 (44-188)||(19892465-19892609)
chr2 (63-188)||(28603250-28603375)
chr2 (39-188)||(35601874-35602023)
chr2 (39-172)||(25478291-25478424)
chr2 (39-188)||(30650881-30651030)
chr2 (36-188)||(7737842-7737994)
chr2 (36-180)||(31326699-31326843)
chr2 (47-188)||(29677333-29677474)
chr2 (44-188)||(35638996-35639140)
chr2 (44-187)||(42926758-42926903)
chr2 (39-188)||(18344383-18344532)
chr2 (39-172)||(25497319-25497452)
chr2 (39-188)||(30658215-30658364)
chr2 (35-188)||(30631531-30631684)
chr2 (44-188)||(12796877-12797021)
chr2 (58-188)||(29677719-29677849)
chr2 (44-156)||(40847594-40847706)
chr2 (44-156)||(17545297-17545410)
chr2 (60-155)||(21523735-21523829)
chr2 (47-156)||(19094497-19094606)
chr2 (44-156)||(19578413-19578525)
chr2 (69-156)||(20711429-20711516)
chr2 (57-150)||(160031-160124)
chr2 (64-127)||(14104604-14104666)
chr2 (45-142)||(5089277-5089373)
chr2 (45-144)||(42914639-42914737)
chr2 (106-142)||(39542900-39542936)
chr2 (45-141)||(42723451-42723546)
chr2 (45-141)||(42728620-42728715)
chr2 (45-141)||(44096302-44096397)
chr2 (45-141)||(44754596-44754691)
chr2 (45-141)||(44759762-44759857)
chr2 (64-127)||(44957456-44957518)
chr2 (132-174)||(15489801-15489843)
chr2 (88-141)||(32079377-32079430)
chr2 (44-144)||(7734596-7734695)
chr2 (106-150)||(39542566-39542610)
chr2 (45-141)||(40518472-40518567)
[»] scaffold0182 (1 HSPs)
scaffold0182 (39-188)||(9881-10030)
[»] chr5 (46 HSPs)
chr5 (39-188)||(12501893-12502042)
chr5 (39-188)||(42001386-42001535)
chr5 (44-188)||(6514600-6514744)
chr5 (36-188)||(29167964-29168116)
chr5 (44-188)||(37652829-37652973)
chr5 (36-188)||(41996617-41996769)
chr5 (39-188)||(6155413-6155562)
chr5 (44-189)||(39523000-39523145)
chr5 (44-188)||(556647-556791)
chr5 (44-188)||(561419-561563)
chr5 (44-188)||(26667224-26667368)
chr5 (44-188)||(26938821-26938965)
chr5 (39-185)||(36942259-36942405)
chr5 (36-188)||(12102976-12103129)
chr5 (39-188)||(36423589-36423738)
chr5 (44-188)||(7451710-7451854)
chr5 (44-188)||(41587159-41587303)
chr5 (39-185)||(36937505-36937651)
chr5 (44-185)||(12045138-12045279)
chr5 (47-188)||(40147847-40147988)
chr5 (39-187)||(37248789-37248937)
chr5 (44-188)||(39518362-39518506)
chr5 (39-188)||(36428661-36428810)
chr5 (44-188)||(20181062-20181206)
chr5 (39-172)||(10759814-10759946)
chr5 (44-174)||(3665898-3666028)
chr5 (44-188)||(32461548-32461683)
chr5 (44-188)||(35679874-35680021)
chr5 (44-184)||(11981279-11981418)
chr5 (44-187)||(12041931-12042076)
chr5 (44-156)||(12102830-12102942)
chr5 (57-156)||(16116261-16116360)
chr5 (45-141)||(24435869-24435964)
chr5 (57-156)||(15414893-15414992)
chr5 (64-127)||(18265524-18265586)
chr5 (44-98)||(37550031-37550085)
chr5 (45-141)||(13582690-13582785)
chr5 (45-144)||(7805068-7805166)
chr5 (45-144)||(14374132-14374230)
chr5 (60-156)||(9911137-9911233)
chr5 (45-141)||(36253826-36253921)
chr5 (44-150)||(1414050-1414155)
chr5 (98-144)||(31986723-31986769)
chr5 (96-142)||(32287969-32288015)
chr5 (45-141)||(17510058-17510153)
chr5 (132-188)||(37550089-37550144)
[»] chr3 (55 HSPs)
chr3 (39-188)||(23666117-23666266)
chr3 (39-188)||(24038365-24038514)
chr3 (44-188)||(7571217-7571361)
chr3 (44-188)||(55431265-55431409)
chr3 (44-189)||(3033593-3033738)
chr3 (35-188)||(3418945-3419098)
chr3 (39-188)||(3672536-3672685)
chr3 (39-188)||(3692568-3692717)
chr3 (44-188)||(39775727-39775871)
chr3 (39-188)||(8069629-8069778)
chr3 (39-188)||(758362-758511)
chr3 (39-188)||(8883120-8883269)
chr3 (43-188)||(8887880-8888025)
chr3 (44-188)||(18467175-18467319)
chr3 (39-188)||(14438689-14438838)
chr3 (44-188)||(3657239-3657383)
chr3 (44-188)||(29350190-29350334)
chr3 (44-188)||(29715594-29715738)
chr3 (44-188)||(49971423-49971567)
chr3 (39-188)||(18471958-18472106)
chr3 (44-188)||(12965872-12966016)
chr3 (44-188)||(20520004-20520148)
chr3 (39-185)||(32474674-32474818)
chr3 (44-156)||(12112640-12112752)
chr3 (36-156)||(12971624-12971744)
chr3 (88-188)||(27708828-27708928)
chr3 (39-188)||(23661458-23661593)
chr3 (68-153)||(17026128-17026213)
chr3 (44-161)||(19276919-19277036)
chr3 (47-129)||(16013718-16013801)
chr3 (64-127)||(48435847-48435909)
chr3 (65-153)||(28125102-28125189)
chr3 (98-188)||(2207760-2207850)
chr3 (39-115)||(27708959-27709035)
chr3 (64-127)||(16983008-16983070)
chr3 (45-144)||(38436991-38437089)
chr3 (64-127)||(48432422-48432484)
chr3 (45-144)||(53119524-53119622)
chr3 (42-122)||(46964031-46964111)
chr3 (82-149)||(25726830-25726897)
chr3 (45-144)||(33089343-33089441)
chr3 (65-122)||(1641092-1641149)
chr3 (45-150)||(26962050-26962154)
chr3 (105-150)||(27605195-27605240)
chr3 (45-141)||(20090662-20090757)
chr3 (45-141)||(20095787-20095882)
chr3 (44-112)||(20507679-20507747)
chr3 (45-141)||(34129169-34129264)
chr3 (45-144)||(13022024-13022122)
chr3 (105-150)||(15768250-15768295)
chr3 (45-141)||(3476946-3477041)
chr3 (44-150)||(7806553-7806656)
chr3 (105-141)||(15763089-15763125)
chr3 (45-141)||(17368719-17368814)
chr3 (62-142)||(28940178-28940258)
[»] scaffold0352 (1 HSPs)
scaffold0352 (44-188)||(7056-7200)
[»] scaffold0057 (1 HSPs)
scaffold0057 (44-188)||(35586-35730)
[»] chr8 (50 HSPs)
chr8 (44-188)||(31449865-31450009)
chr8 (42-188)||(18876364-18876509)
chr8 (39-188)||(33416499-33416648)
chr8 (44-188)||(17025887-17026031)
chr8 (44-188)||(17556379-17556523)
chr8 (25-172)||(2355439-2355586)
chr8 (39-188)||(34118418-34118567)
chr8 (44-188)||(44925922-44926066)
chr8 (47-173)||(1807439-1807565)
chr8 (44-156)||(19166618-19166730)
chr8 (61-188)||(28559670-28559797)
chr8 (67-188)||(4238337-4238458)
chr8 (39-156)||(40125879-40125996)
chr8 (44-188)||(38182236-38182379)
chr8 (81-188)||(40130722-40130829)
chr8 (67-188)||(4243076-4243197)
chr8 (44-188)||(1910968-1911112)
chr8 (44-156)||(17953872-17953984)
chr8 (44-156)||(15875667-15875779)
chr8 (44-155)||(36683564-36683675)
chr8 (44-156)||(23548631-23548743)
chr8 (44-156)||(24090611-24090723)
chr8 (44-153)||(2965618-2965726)
chr8 (39-156)||(43302712-43302830)
chr8 (65-156)||(24673345-24673436)
chr8 (61-151)||(28564837-28564927)
chr8 (61-151)||(28572460-28572550)
chr8 (44-142)||(7902561-7902659)
chr8 (45-166)||(29220240-29220359)
chr8 (45-144)||(31030525-31030623)
chr8 (45-144)||(19430011-19430109)
chr8 (45-144)||(19435513-19435611)
chr8 (45-144)||(19566160-19566258)
chr8 (45-144)||(19571662-19571760)
chr8 (64-126)||(19954287-19954348)
chr8 (66-127)||(19949832-19949892)
chr8 (45-142)||(33616727-33616823)
chr8 (132-188)||(19915099-19915155)
chr8 (45-141)||(32015700-32015795)
chr8 (68-127)||(2469988-2470046)
chr8 (64-143)||(17793450-17793529)
chr8 (65-127)||(4544271-4544332)
chr8 (64-157)||(5883982-5884074)
chr8 (59-119)||(34517263-34517321)
chr8 (65-156)||(13149718-13149808)
chr8 (68-129)||(7145827-7145887)
chr8 (105-150)||(13584341-13584386)
chr8 (45-150)||(43999230-43999334)
chr8 (45-141)||(17955789-17955884)
chr8 (44-144)||(42157871-42157970)
[»] scaffold0002 (2 HSPs)
scaffold0002 (39-188)||(4026-4175)
scaffold0002 (39-188)||(443939-444075)
[»] chr1 (46 HSPs)
chr1 (39-188)||(19799007-19799156)
chr1 (39-188)||(26927716-26927865)
chr1 (44-188)||(33301179-33301323)
chr1 (44-188)||(47455385-47455529)
chr1 (39-188)||(10135408-10135557)
chr1 (44-185)||(23192816-23192957)
chr1 (44-188)||(16649612-16649755)
chr1 (44-188)||(40165932-40166076)
chr1 (62-188)||(39588384-39588510)
chr1 (67-188)||(3094066-3094187)
chr1 (44-184)||(18784548-18784687)
chr1 (44-188)||(47451224-47451368)
chr1 (42-161)||(12259975-12260094)
chr1 (44-157)||(16035591-16035704)
chr1 (39-188)||(51041457-51041604)
chr1 (82-188)||(25855123-25855229)
chr1 (39-188)||(10140041-10140190)
chr1 (44-188)||(38620645-38620788)
chr1 (44-156)||(8900238-8900350)
chr1 (96-188)||(16832053-16832145)
chr1 (47-156)||(11806343-11806452)
chr1 (57-151)||(5346652-5346746)
chr1 (59-127)||(12906168-12906235)
chr1 (44-127)||(2493817-2493899)
chr1 (64-127)||(33380940-33381002)
chr1 (64-123)||(27761858-27761916)
chr1 (44-144)||(10106100-10106199)
chr1 (132-188)||(25843764-25843820)
chr1 (68-127)||(24159822-24159880)
chr1 (44-152)||(28434573-28434680)
chr1 (45-141)||(34318224-34318319)
chr1 (64-127)||(31063970-31064032)
chr1 (45-144)||(38734272-38734370)
chr1 (81-150)||(4632962-4633031)
chr1 (105-150)||(19422937-19422982)
chr1 (67-144)||(27461723-27461800)
chr1 (45-141)||(5724979-5725074)
chr1 (45-141)||(36684715-36684810)
chr1 (59-127)||(36724722-36724789)
chr1 (45-144)||(13890810-13890908)
chr1 (45-144)||(39747165-39747263)
chr1 (45-141)||(11251113-11251208)
chr1 (80-124)||(17135243-17135287)
chr1 (59-127)||(23193237-23193304)
chr1 (66-122)||(25661844-25661899)
chr1 (45-141)||(37404416-37404511)
[»] chr7 (48 HSPs)
chr7 (36-188)||(4930185-4930337)
chr7 (44-188)||(26341151-26341295)
chr7 (44-185)||(8076005-8076146)
chr7 (44-185)||(9650966-9651107)
chr7 (44-188)||(44423136-44423281)
chr7 (44-185)||(44510676-44510817)
chr7 (44-156)||(4579492-4579604)
chr7 (44-188)||(8268245-8268389)
chr7 (44-156)||(23246932-23247044)
chr7 (44-143)||(23866065-23866164)
chr7 (44-188)||(13314235-13314379)
chr7 (58-188)||(27238193-27238324)
chr7 (57-156)||(29150918-29151017)
chr7 (62-188)||(42627214-42627341)
chr7 (44-156)||(25543361-25543473)
chr7 (61-156)||(3357648-3357743)
chr7 (68-156)||(16372382-16372469)
chr7 (47-188)||(3879948-3880091)
chr7 (44-157)||(9008146-9008259)
chr7 (36-156)||(10388358-10388476)
chr7 (44-156)||(12254063-12254175)
chr7 (57-138)||(15642236-15642317)
chr7 (72-188)||(30256806-30256922)
chr7 (44-116)||(6590982-6591054)
chr7 (44-156)||(21671179-21671291)
chr7 (68-156)||(26287181-26287269)
chr7 (66-129)||(29478176-29478238)
chr7 (65-127)||(3284740-3284802)
chr7 (65-126)||(6898376-6898436)
chr7 (44-144)||(9973459-9973558)
chr7 (65-127)||(1289353-1289414)
chr7 (45-141)||(33238002-33238097)
chr7 (64-156)||(45748662-45748754)
chr7 (45-141)||(47998975-47999070)
chr7 (45-144)||(24528351-24528449)
chr7 (62-96)||(12799454-12799488)
chr7 (80-145)||(14782823-14782886)
chr7 (80-145)||(15232852-15232915)
chr7 (44-117)||(13142900-13142973)
chr7 (45-141)||(2234630-2234725)
chr7 (45-141)||(16539412-16539507)
chr7 (45-141)||(16626155-16626250)
chr7 (105-141)||(22857746-22857782)
chr7 (48-144)||(28292506-28292600)
chr7 (45-141)||(32212654-32212749)
chr7 (45-141)||(33243179-33243274)
chr7 (45-141)||(42571945-42572040)
chr7 (45-141)||(47993800-47993895)
[»] chr6 (44 HSPs)
chr6 (44-188)||(8747734-8747878)
chr6 (36-189)||(2700097-2700250)
chr6 (44-188)||(6407859-6408003)
chr6 (44-188)||(11570748-11570892)
chr6 (44-188)||(12688923-12689067)
chr6 (68-188)||(19674265-19674385)
chr6 (44-188)||(21308983-21309127)
chr6 (44-156)||(24589163-24589275)
chr6 (36-188)||(33687594-33687746)
chr6 (44-157)||(20748283-20748396)
chr6 (44-156)||(29892260-29892372)
chr6 (60-174)||(14508950-14509064)
chr6 (101-188)||(11534734-11534821)
chr6 (101-188)||(11560244-11560331)
chr6 (44-156)||(11614091-11614203)
chr6 (76-188)||(11427995-11428108)
chr6 (39-120)||(17964553-17964634)
chr6 (39-120)||(16836150-16836231)
chr6 (58-156)||(12406366-12406464)
chr6 (44-154)||(22695270-22695380)
chr6 (44-165)||(13736677-13736798)
chr6 (59-172)||(25316580-25316693)
chr6 (59-172)||(26204074-26204187)
chr6 (64-127)||(35129642-35129704)
chr6 (45-145)||(12183000-12183100)
chr6 (111-161)||(2863518-2863568)
chr6 (111-164)||(2882821-2882874)
chr6 (47-144)||(3901909-3902006)
chr6 (64-121)||(32815082-32815138)
chr6 (65-125)||(32551539-32551598)
chr6 (57-144)||(10642706-10642793)
chr6 (61-144)||(19478145-19478227)
chr6 (66-143)||(12851809-12851886)
chr6 (107-144)||(29325532-29325569)
chr6 (83-127)||(14041705-14041749)
chr6 (45-141)||(22698243-22698338)
chr6 (45-141)||(29491237-29491332)
chr6 (45-141)||(31981560-31981655)
chr6 (98-145)||(5601025-5601072)
chr6 (45-144)||(13605092-13605190)
chr6 (111-157)||(17729090-17729136)
chr6 (45-141)||(34142080-34142175)
chr6 (45-141)||(34154696-34154791)
chr6 (105-141)||(34375919-34375955)
[»] scaffold0054 (1 HSPs)
scaffold0054 (36-188)||(25351-25503)
[»] scaffold0045 (1 HSPs)
scaffold0045 (44-185)||(83021-83162)
[»] scaffold0012 (1 HSPs)
scaffold0012 (39-149)||(166080-166190)
[»] scaffold0184 (1 HSPs)
scaffold0184 (42-156)||(2293-2406)
[»] scaffold2020 (1 HSPs)
scaffold2020 (44-150)||(361-467)
[»] scaffold0009 (1 HSPs)
scaffold0009 (44-150)||(165028-165134)
[»] scaffold0240 (1 HSPs)
scaffold0240 (36-156)||(3975-4095)
[»] scaffold0008 (1 HSPs)
scaffold0008 (44-153)||(255804-255913)
[»] scaffold0128 (1 HSPs)
scaffold0128 (66-147)||(13265-13346)
[»] scaffold0132 (2 HSPs)
scaffold0132 (45-144)||(2772-2870)
scaffold0132 (45-144)||(10732-10830)
[»] scaffold0097 (1 HSPs)
scaffold0097 (69-156)||(15268-15355)
[»] scaffold0018 (1 HSPs)
scaffold0018 (64-127)||(171734-171796)
[»] scaffold0014 (2 HSPs)
scaffold0014 (45-141)||(26373-26468)
scaffold0014 (45-141)||(31545-31640)
[»] scaffold0011 (2 HSPs)
scaffold0011 (45-144)||(1562-1660)
scaffold0011 (45-144)||(7043-7141)
[»] scaffold0060 (1 HSPs)
scaffold0060 (45-150)||(37001-37105)
[»] scaffold0055 (1 HSPs)
scaffold0055 (45-141)||(3058-3153)
[»] scaffold0052 (1 HSPs)
scaffold0052 (45-141)||(81382-81477)
[»] scaffold0067 (1 HSPs)
scaffold0067 (105-144)||(34028-34067)
[»] scaffold0594 (1 HSPs)
scaffold0594 (45-141)||(9208-9303)
[»] scaffold0166 (1 HSPs)
scaffold0166 (45-141)||(13740-13835)


Alignment Details
Target: chr4 (Bit Score: 106; Significance: 3e-53; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 31273622 - 31273473
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| || |||||||    
T  31273622 tgggcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgac 31273523  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| |||||||||||| |||||||||||||    
T  31273522 tcaacctagtaacaacttcggtagataatagaatttggaaatccaaatac 31273473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 44 - 187
Target Start/End: Original strand, 5271418 - 5271561
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| || ||||||||||||    
T  5271418 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 5271517  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaata 187  Q
    |||||||||||||  ||| |||||||||||| ||||| ||||||    
T  5271518 ctagtaacaacttcggtagataatagaatttggaaattcaaata 5271561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 31269130 - 31268986
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||||| | ||||| ||||||||||||||||||||||||| || ||||||||||||    
T  31269130 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 31269031  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||| |||||||||||| |||||||||||||    
T  31269030 ctagtaacaacttcggtagataatagaatttggaaatccaaatac 31268986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 37264558 - 37264707
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||||||||| |||||| |||||||| ||||| ||||||||||||||||||||||||| || |||||||    
T  37264558 tgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcataattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgac 37264657  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||   || |||||||||||| |||||||||||||    
T  37264658 tcaacctagtaacaacttcgatagataatagaatttggaaatccaaatac 37264707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 36 - 188
Target Start/End: Complemental strand, 55251823 - 55251673
Alignment:
Q  36 agttgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgt 135  Q
    ||||||| ||||||||| || |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| || ||||    
T  55251823 agttgggcttgttttatcctggaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccacgaaacgtcttaaa-agagcgacctggtcgt 55251725  T
Q  136 gactcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||||| | || ||||||||| || |||||||||||||    
T  55251724 gactcaacctagtaacaacttcaatagataatagaa-ttggaaatccaaatac 55251673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 13521991 - 13522132
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| || ||||||||||||    
T  13521991 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 13522090  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaa 185  Q
    |||||||||||||  ||| | || ||||||| |||| |||||    
T  13522091 ctagtaacaacttcggtagaaaacagaatttggaaaaccaaa 13522132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 37259871 - 37260020
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||||||||| ||||||||||||||   |||| |||||||||||||||||| |||||| || |||||||    
T  37259871 tgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaagaaagcgacctggtcgtgac 37259970  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| |||||||||||| |||||||||||||    
T  37259971 tcaacctagtaacaacttcggtagataatagaatttggaaatccaaatac 37260020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 8693807 - 8693663
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||  || | ||||||||||||||||||||||||| || ||||||||||||    
T  8693807 ttgttttatccttgaggcggcgtggttgatagtatgtcttgcacaattttgggtagcgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 8693708  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||   || | |||||||||| |||||||||||||    
T  8693707 ctagtaacaacttcgatagacaatagaatttggaaatccaaatac 8693663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 12823894 - 12824038
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||||||||||||||||| |||||||||||||||||| ||||| ||||||| ||||||||||||||||| || || |||||||||    
T  12823894 ttgttttatcctggaggcggcgtggttgatagtttgtcttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcatgactcaac 12823993  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||| |||||||||  ||| | |||||||||| |||||||||||||    
T  12823994 ctaataacaacttcggtagaaaatagaatttggaaatccaaatac 12824038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 46 - 156
Target Start/End: Original strand, 42758756 - 42758866
Alignment:
Q  46 gttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacct 145  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||| || ||||||||||||||    
T  42758756 gttttattctggaggcgacgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctggtcgtgactcaacct 42758855  T
Q  146 agtaacaactt 156  Q
    |||||||||||    
T  42758856 agtaacaactt 42758866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 12878335 - 12878223
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    |||||||||||| |||| |||||| |||||||||||  ||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||    
T  12878335 ttgttttattctggaggtggcgtgattgatagtctgctttgcacaattttgaaaagtgtcacgaaacgtcttaaagagagcgacctgatcgtgactcaac 12878236  T
Q  144 ctagtaacaactt 156  Q
    |||||||||||||    
T  12878235 ctagtaacaactt 12878223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 13059506 - 13059362
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||   ||||| ||||||||||||||||||||||||  || || |||||||||    
T  13059506 ttgttttattctagaggcggagtggttgatagtctgtcttgcacaattttatgcagtgccacgaaacgtcttaaagagagcgatctggtcatgactcaac 13059407  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||| |||||  ||| ||||||||||||  ||||||||||||    
T  13059406 ctagtaataacttcggtagataatagaatttgaaaatccaaatac 13059362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 44 - 185
Target Start/End: Complemental strand, 31765982 - 31765837
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||| ||| || | ||||||||||    
T  31765982 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagtgacctggttgtgactcaac 31765883  T
Q  144 ctagtaacaactt---tag-taaataatagaatttagaaatccaaa 185  Q
    |||||||||||||   ||| ||| ||||||||||| ||||||||||    
T  31765882 ctagtaacaacttcggtagataattaatagaatttggaaatccaaa 31765837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 39 - 173
Target Start/End: Complemental strand, 16421130 - 16420996
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| ||  |||||||||||||||||||||| ||||||||||||||| ||||| ||||||| ||||||| ||||||||| || |||||||    
T  16421130 tgggcttgttttatcctgtaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaatgagagcgacctggtcgtgac 16421031  T
Q  139 tcaacctagtaacaactttagtaaataatagaatt 173  Q
    ||||||||||||||||||  ||| |||||||||||    
T  16421030 tcaacctagtaacaacttcggtagataatagaatt 16420996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 8030470 - 8030619
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||| |||| ||||||||||| |||||||||||||||| ||||| ||| ||||||||||||||||||||| |||| ||||     
T  8030470 tgggcttgttttatcctggaggcagcgttgttgatagtctatcttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctgattgtgat 8030569  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| ||||||||||||  |||| |||||||    
T  8030570 tcaacctagtaacaacttcggtagataatagaatttgaaaattcaaatac 8030619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 19106715 - 19106571
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    |||||||||||| |||||| |||||||||||||| | ||||||||||||||| |||||  | ||||||||||||||| |||||  || | ||||||||||    
T  19106715 ttgttttattctggaggcgacgtggttgatagtcagccttgcacaattttgggcagtgctatgaaacgtcttaaagaaagcgatctgcttgtgactcaac 19106616  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||| |||||||||||| |||||||||||||    
T  19106615 ctagtaacaacttcggtagataatagaatttggaaatccaaatac 19106571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 44 - 180
Target Start/End: Original strand, 33463355 - 33463491
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||| |||||| | |||| ||||||||| ||||||||||| ||||||||||||||||||||||||| || ||||||||||||    
T  33463355 ttgttttatcctggaggcggcggggttgacaatctgccttgcacaactttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 33463454  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaat 180  Q
    |||||||||||||   || |||||||||||| |||||    
T  33463455 ctagtaacaacttcgatagataatagaatttggaaat 33463491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 47244344 - 47244200
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||||||||||||||||||| ||||  | ||||||| |||||| ||||||||||||||||||| ||||| |||||||||||||||    
T  47244344 ttgttttatcctggaggcggcgtggttgatagtctttcttcaataattttgaacagtgccacgaaacgtcttaaagagggcgacctgatcgtgactcaac 47244245  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||| |||||||||   || |||||| ||||| |||||||||||||    
T  47244244 ctactaacaacttcgatagataatataatttggaaatccaaatac 47244200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 44 - 172
Target Start/End: Complemental strand, 51698013 - 51697885
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||||||  |||||||| ||||||||||||| |||||||  || ||||||||||||    
T  51698013 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagcagtgtcatgaaacgtcttaaaaagagcgatctggtcgtgactcaac 51697914  T
Q  144 ctagtaacaactttagtaaataatagaat 172  Q
    |||||||||||||  ||| ||||||||||    
T  51697913 ctagtaacaacttcggtagataatagaat 51697885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 5928213 - 5928362
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||| ||||||||||||||| ||||||||||||||  ||||| ||| |||| |||||||||||||||| || |||||||    
T  5928213 tgggcttgttttatcctggaggcggtgtggttgatagtctgccttgcacaattttgagcagtgccactaaacatcttaaagagagcgacctggtcgtgac 5928312  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||| ||||||||||  ||| ||||||||||||  || |||||||||    
T  5928313 tcaacctggtaacaacttcggtagataatagaatttgaaactccaaatac 5928362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 19102073 - 19101929
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||| ||||||||||||||||| |||||||||||||   |||| |||||||||||||||| |||| ||| |  |||||||| |||    
T  19102073 ttgttttatcctggaggcgacgtggttgatagtctgttttgcacaattttgagtagtgccacgaaacgtcttaaacagagtgacctcgtcgtgacttaac 19101974  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||  || |||||||||||| |||||||||||||    
T  19101973 ctagtaacaactttgatagataatagaatttggaaatccaaatac 19101929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 32082090 - 32082233
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||||||||||||||||| || ||||||||||||||||||||| || |||| |||||||| |||| ||  || ||||||||||||    
T  32082090 ttgttttatcctggaggcggcgtggttgatagt-tgccttgcacaattttggacagtgccatgaaatgtcttaaaaagagtgatctggtcgtgactcaac 32082188  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||  |||||||||||| |||||||||||||    
T  32082189 ctagtaacaacttcggttgataatagaatttggaaatccaaatac 32082233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 33468972 - 33469116
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    |||||||||  | |||| ||||||||||| |||||| ||||||||| ||||| ||||| ||| |||||||||||||||| |||| |  ||||||||||||    
T  33468972 ttgttttatcatggaggtggcgtggttgacagtctgccttgcacaactttgggcagtgccacaaaacgtcttaaagagaacgacctagtcgtgactcaac 33469071  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||| |||| ||||||||||||  ||||||||||||    
T  33469072 ctagtaacaacttcagtagataatagaatttgaaaatccaaatac 33469116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 44 - 174
Target Start/End: Complemental strand, 19906347 - 19906217
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||||||  |||||||||||||||||||||||||| |||||||||||  ||||||||||| |||||||| |||||||||||||||    
T  19906347 ttgttttatcctggaggcggcggagttgatagtctgtcttgcacaattttagacagtgtcactgaacgtcttaaaaagagcgacctgatcgtgactcaac 19906248  T
Q  144 ctagtaacaactttagtaaataatagaattt 174  Q
    ||| ||| |||||  ||| |||||| |||||    
T  19906247 ctaataataacttcggtagataataaaattt 19906217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 44 - 179
Target Start/End: Complemental strand, 47574721 - 47574586
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || || |||||||| |||||| | ||||||||||||||||||  ||||||| |||||||||||||||||||||| |||| ||||||||||    
T  47574721 ttgttttatcctggatgcggcgtgattgatattttgtcttgcacaattttgggtagtgtcaagaaacgtcttaaagagagcgacctgattgtgactcaac 47574622  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaa 179  Q
    ||| |||||| ||  ||| |||||||||||| ||||    
T  47574621 ctaataacaaattcggtagataatagaatttggaaa 47574586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 1151312 - 1151409
Alignment:
Q  59 ggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactt 156  Q
    ||||||||| ||||||||  |||||||||||||||||| ||||||| |||||||||||||||||| ||  |||||| |||||||||||||||||||||    
T  1151312 ggcggcgtgattgatagttagtcttgcacaattttggatagtgtcatgaaacgtcttaaagagagtgatctgatcgcgactcaacctagtaacaactt 1151409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 44 - 161
Target Start/End: Complemental strand, 12874635 - 12874518
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||| ||||| |||||  |||||||||||| ||||||| ||||||  ||||||||||||||||  |||| ||||||||||    
T  12874635 ttgttttatcctggaggcggcgtgattgatggtctgctttgcacaattttagacagtgccacgaattgtcttaaagagagcgatctgattgtgactcaac 12874536  T
Q  144 ctagtaacaactttagta 161  Q
    ||| ||||||||| ||||    
T  12874535 ctaataacaacttcagta 12874518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 57 - 156
Target Start/End: Original strand, 13065780 - 13065879
Alignment:
Q  57 gaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactt 156  Q
    ||||| ||||||||||||||||  ||| ||||| ||||| ||||| || |||||||||||||||||||||| |  |||||||||||||||||||||||||    
T  13065780 gaggctgcgtggttgatagtctccctttcacaactttgggcagtgccatgaaacgtcttaaagagagcgacatagtcgtgactcaacctagtaacaactt 13065879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 31729386 - 31729481
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgact 139  Q
    ||||||||| || ||||||||||| ||||| ||||| |||||||||||||||  |||| ||||||||||||||||||||||||| ||||| |||||    
T  31729386 ttgttttatcctggaggcggcgtgattgattgtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagagcgacctgatcatgact 31729481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 70 - 153
Target Start/End: Complemental strand, 51697072 - 51696989
Alignment:
Q  70 tgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaa 153  Q
    |||||||||| ||||||||||||||| ||||| || |||||||||||| ||||||||| || ||||||||||||||||||||||    
T  51697072 tgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaggagagcgacctggtcgtgactcaacctagtaacaa 51696989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 48276648 - 48276749
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||     ||||||||||||| ||||||  || ||||||||||||||||||||| ||||||||| |||||    
T  48276648 ttgttttatcctggaggcggcgtggttgatagt-----ttgcacaattttgaacagtgcaacaaaacgtcttaaagagagcgacctgatcgtgattcaac 48276742  T
Q  144 ctagtaa 150  Q
    |||||||    
T  48276743 ctagtaa 48276749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 44 - 153
Target Start/End: Original strand, 19541160 - 19541269
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| ||  ||||||||||||||||||||||||||| ||||||||  ||| || |||||||  ||||||| ||| |||  |||||||||||||||    
T  19541160 ttgttttatcctataggcggcgtggttgatagtctgtcttgtacaattttaaacaatgccacgaaatatcttaaaaagaacgatctgatcgtgactcaac 19541259  T
Q  144 ctagtaacaa 153  Q
    ||||||||||    
T  19541260 ctagtaacaa 19541269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 2819940 - 2819828
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || || ||||| |||| ||||||||  ||||||||||||||||||||  |||||||| ||||||||| | |||| || |||||||||||     
T  2819940 ttgttttatcctggacgcggcatggtagatagtctaccttgcacaattttggacagtaccacgaaacatcttaaagaaaacgacctggtcgtgactcaat 2819841  T
Q  144 ctagtaacaactt 156  Q
    |||||||||||||    
T  2819840 ctagtaacaactt 2819828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 52691089 - 52691158
Alignment:
Q  79 gtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagt 148  Q
    ||||||||||||||||| ||| ||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  52691089 gtcttgcacaattttgggcagagtcacaaaacgtcttaaagagagcgatatgatcgtgactcaacctagt 52691158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 42 - 156
Target Start/End: Complemental strand, 4551095 - 4550982
Alignment:
Q  42 gtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    ||||||||||| || |||||||||| |||||||||||||||||||||| ||||  ||||| ||  ||| ||||||||  || |||| | ||| |||||||    
T  4551095 gtttgttttatcctggaggcggcgtagttgatagtctgtcttgcacaactttgagcagtggcataaaatgtcttaaa-tgaacgacctaatcatgactca 4550997  T
Q  142 acctagtaacaactt 156  Q
    |||||||||||||||    
T  4550996 acctagtaacaactt 4550982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 188
Target Start/End: Original strand, 32221163 - 32221240
Alignment:
Q  111 gtcttaaagagagcgacttgatcgtgactcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||| || |||||||||||||||||||||| ||  ||| ||||||||||||  ||||||||||||    
T  32221163 gtcttaaagagagcgacctggtcgtgactcaacctagtaacaatttcggtagataatagaatttgaaaatccaaatac 32221240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 10120811 - 10120913
Alignment:
Q  47 ttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaaccta 146  Q
    |||||| || ||| ||||||||||| ||||||  ||||||||| || ||  |||| | ||||||||||||||||||||||| |||||||||||||||||     
T  10120811 ttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgccgcgaaacgtcttaaagagagcgacctgatcgtgactcaacctg 10120909  T
Q  147 gtaa 150  Q
    ||||    
T  10120910 gtaa 10120913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 16595953 - 16596015
Alignment:
Q  64 cgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgac 127  Q
    ||||||||| |||||| ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  16595953 cgtggttgacagtctg-cttgcacaattttggacagtgccacaaaacgtcttaaagagagcgac 16596015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 33722939 - 33722997
Alignment:
Q  64 cgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagag 123  Q
    |||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33722939 cgtggtcgatggtctg-cttgcacaattttggacagtgtcacgaaacgtcttaaagagag 33722997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 15020485 - 15020544
Alignment:
Q  64 cgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagc 124  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||||||| |||||||||||    
T  15020485 cgtggttgatagtctgt-ttgcacaattttgggaagtgtcacgaaacgttttaaagagagc 15020544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 166
Target Start/End: Complemental strand, 32545171 - 32545068
Alignment:
Q  64 cgtggttgatagtctgtcttg-cacaattttg-gacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactttagta 161  Q
    ||||||||||||||||||||| |||||||||  | | ||| |||||||| ||||||| |||  ||| |||||||||||||||||||||||||||| ||||    
T  32545171 cgtggttgatagtctgtcttgacacaatttttaggcggtgccacgaaacatcttaaa-agattgacctgatcgtgactcaacctagtaacaacttcagta 32545073  T
Q  162 aataa 166  Q
     ||||    
T  32545072 gataa 32545068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 20513182 - 20513120
Alignment:
Q  64 cgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgac 127  Q
    |||||||||||||||| ||||||||||||||  ||||| |||||||| ||||||||||||||||    
T  20513182 cgtggttgatagtctg-cttgcacaattttgagcagtgccacgaaacatcttaaagagagcgac 20513120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 16953181 - 16953107
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaa 118  Q
    ||||||||| || ||||||  ||||||||||||||| |||||||||||||||  |||  ||||||||||||||||    
T  16953181 ttgttttatcctggaggcgttgtggttgatagtctgccttgcacaattttgggtagtaccacgaaacgtcttaaa 16953107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 653138 - 653043
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||||||||| ||||||  ||||||||| || ||  |||| | ||||||||||||||||||||||| || ||||||||||    
T  653138 tgttttatcctggagacggcgtggttgttagtctaccttgcacaaattgggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 653043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 157
Target Start/End: Complemental strand, 6070662 - 6070570
Alignment:
Q  65 gtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaacttt 157  Q
    |||||| ||||| | ||||||||||||||  ||| || || ||||| |||||||||||||||  || || |||||||| ||||||||||||||    
T  6070662 gtggttaatagtttctcttgcacaattttaaacaatgccaggaaacatcttaaagagagcgatctggtcatgactcaatctagtaacaacttt 6070570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 24490127 - 24490028
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || |||| |||| ||||| ||||||  |||||||||  |||   |||||| ||||||||||||||||||||||  || |||||||||||||    
T  24490127 tgttttatcctggaggtggcgcggttgttagtctaccttgcacaaacttgattagtgtcgcgaaacgtcttaaagagagcgatctggtcgtgactcaacc 24490028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 34644653 - 34644554
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| ||  |||||||| ||||| |||| |  ||| |||||  | ||| |||||| |||||||||||||||| |||||| ||||||||||||||||    
T  34644653 tgttttatcctgtaggcggcgcggttgttagtttaccttacacaaactcggatagtgtcgcgaaacgtcttaaagaaagcgacatgatcgtgactcaacc 34644554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 57 - 139
Target Start/End: Original strand, 8083039 - 8083121
Alignment:
Q  57 gaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgact 139  Q
    ||||||||| ||||| ||||||  ||||||| |  ||||| |||| |  |||||||||||||||||||||| |||||||||||    
T  8083039 gaggcggcgcggttgttagtctaccttgcactaacttggatagtgccgtgaaacgtcttaaagagagcgacctgatcgtgact 8083121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 144
Target Start/End: Original strand, 10318778 - 10318878
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||| ||| || ||||||||| ||||| ||||||  |||||||||  ||||| |   || ||||| ||||||||||||||||| || ||||||||||||    
T  10318778 ttgttctatcctagaggcggcgcggttgttagtctaccttgcacaaacttggatacgatcgcgaaatgtcttaaagagagcgacatggtcgtgactcaac 10318877  T
Q  144 c 144  Q
    |    
T  10318878 c 10318878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 36354271 - 36354176
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||  ||  |||| | ||||||||||||||||||||||| || ||||||||||    
T  36354271 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 36354176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 36359389 - 36359294
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||  ||  |||| | ||||||||||||||||||||||| || ||||||||||    
T  36359389 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 36359294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 39999164 - 39999069
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||  ||  |||| | ||||||||||||||||||||||| || ||||||||||    
T  39999164 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 39999069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 40004122 - 40004027
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||  ||  |||| | ||||||||||||||||||||||| || ||||||||||    
T  40004122 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 40004027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 53797724 - 53797629
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||| ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  53797724 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 53797629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 54348452 - 54348357
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||  ||  |||| | ||||||||||||||||||||||| || ||||||||||    
T  54348452 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 54348357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 144
Target Start/End: Complemental strand, 7715174 - 7715136
Alignment:
Q  106 gaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  7715174 gaaacgtcttaaagagagtgacatgatcgtgactcaacc 7715136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 144
Target Start/End: Complemental strand, 39319666 - 39319628
Alignment:
Q  106 gaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  39319666 gaaacgtcttaaagaaagcgacctgatcgtgactcaacc 39319628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 8980285 - 8980380
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  8980285 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 8980380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 8985405 - 8985500
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  8985405 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 8985500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 13700605 - 13700510
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  13700605 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 13700510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 21299833 - 21299928
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  21299833 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 21299928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 112
Target Start/End: Original strand, 39217372 - 39217448
Alignment:
Q  36 agttgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgt 112  Q
    ||||||| || |||||| || ||||  | |||||| ||||| | ||||| |||||||| ||||||||||||||||||    
T  39217372 agttgggctttttttatactagaggtagtgtggttaatagtttatcttgtacaattttagacagtgtcacgaaacgt 39217448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 41393340 - 41393245
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  41393340 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 41393245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 51019373 - 51019468
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  51019373 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 51019468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 54343239 - 54343203
Alignment:
Q  105 cgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    ||||||||||||||||||||||| || ||||||||||    
T  54343239 cgaaacgtcttaaagagagcgacctggtcgtgactca 54343203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 54991581 - 54991486
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  54991581 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 54991486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 3e-53; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 1934987 - 1935136
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| || |||||||    
T  1934987 tgggcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgac 1935086  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| |||||||||||| |||||||||||||    
T  1935087 tcaacctagtaacaacttcggtagataatagaatttggaaatccaaatac 1935136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 10160723 - 10160867
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||| || ||||||||||||    
T  10160723 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 10160822  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||| ||||||||||||||||||||||||||    
T  10160823 ctagtaacaacttcggtagataatagaatttagaaatccaaatac 10160867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 9180718 - 9180867
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||    
T  9180718 tgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgac 9180817  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| ||||||||||||  ||||||||||||    
T  9180818 tcaacctagtaacaacttcggtagataatagaatttgaaaatccaaatac 9180867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 9189797 - 9189946
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| || || |||||||    
T  9189797 tgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcaacctggtcgtgac 9189896  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| |||||||||||| |||||||||||||    
T  9189897 tcaacctagtaacaacttcggtagataatagaatttggaaatccaaatac 9189946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 19892465 - 19892609
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||| || ||||||||||||    
T  19892465 ttgttttatcctggaggcggcgtggttgatagtctgtgttgcacaattttggacagtgccaggaaacgtcttaaagagagcgacctggtcgtgactcaac 19892564  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||| |||||||||||| |||||||||||||    
T  19892565 ctagtaacaacttcggtagataatagaatttggaaatccaaatac 19892609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 63 - 188
Target Start/End: Complemental strand, 28603375 - 28603250
Alignment:
Q  63 gcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactttagtaa 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||  |||     
T  28603375 gcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgttttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtag 28603276  T
Q  163 ataatagaatttagaaatccaaatac 188  Q
    |||||||||||| |||||||||||||    
T  28603275 ataatagaatttggaaatccaaatac 28603250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 35602023 - 35601874
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||| || ||||||     
T  35602023 tgggtttgttttatcctggaggcggcgtggttgatactctgtcttgcacaattttggacagtgccacgaaacgtcttaaaaagagcgacctggtcgtgat 35601924  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| ||||||||||||  ||||||||||||    
T  35601923 tcaacctagtaacaacttcggtagataatagaatttgaaaatccaaatac 35601874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 39 - 172
Target Start/End: Original strand, 25478291 - 25478424
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| || | |||||    
T  25478291 tgggcttgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacctggttgtgac 25478390  T
Q  139 tcaacctagtaacaactttagtaaataatagaat 172  Q
    ||||||||||||||||||  ||| ||||||||||    
T  25478391 tcaacctagtaacaacttcggtagataatagaat 25478424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 30651030 - 30650881
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| |||||||||  | ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||  || |||||||    
T  30651030 tgggcttgttttatcttggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgatctggtcgtgac 30650931  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| |||||||||||| |||||||||||||    
T  30650930 tcaacctagtaacaacttcggtagataatagaatttggaaatccaaatac 30650881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 36 - 188
Target Start/End: Original strand, 7737842 - 7737994
Alignment:
Q  36 agttgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgt 135  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| ||| |||| |||||||||||||||| || ||||    
T  7737842 agttgggcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaacttcttaaagagagcgacatggtcgt 7737941  T
Q  136 gactcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||||||||||  ||  ||||||||||||  ||||||||||||    
T  7737942 gactcaacctagtaacaacttcggtggataatagaatttgaaaatccaaatac 7737994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 36 - 180
Target Start/End: Complemental strand, 31326843 - 31326699
Alignment:
Q  36 agttgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgt 135  Q
    ||||||| ||||||||| || |||| |||||||||||||||||| ||||||||||||||| ||||| || |||||||||||||||||||||| || ||||    
T  31326843 agttgggcttgttttatcctggaggtggcgtggttgatagtctgccttgcacaattttgggcagtggcatgaaacgtcttaaagagagcgacctggtcgt 31326744  T
Q  136 gactcaacctagtaacaactttagtaaataatagaatttagaaat 180  Q
    |||||||||||||||||||||  ||| |||||||||||| |||||    
T  31326743 gactcaacctagtaacaacttcggtagataatagaatttggaaat 31326699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 47 - 188
Target Start/End: Complemental strand, 29677474 - 29677333
Alignment:
Q  47 ttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaaccta 146  Q
    |||||| || |||||||||||||||||||||||  |||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  29677474 ttttatcctggaggcggcgtggttgatagtctgctttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatgatcgtgactcaaccta 29677375  T
Q  147 gtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||   || ||||||||||||  |||| |||||||    
T  29677374 gtaacaacttcgctagataatagaatttgaaaattcaaatac 29677333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 35638996 - 35639140
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||  ||||||||||||||||||| ||||| |||||||||||||||| |||||||| ||||||||| |||||    
T  35638996 ttgttttatcctggaggcggcgtggttgatacgctgtcttgcacaattttgggcagtgccacgaaacgtcttaaaaagagcgacctgatcgtgattcaac 35639095  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
     ||||||||||||  ||| ||||||||||||  ||||||||||||    
T  35639096 ttagtaacaacttcggtagataatagaatttgaaaatccaaatac 35639140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 44 - 187
Target Start/End: Original strand, 42926758 - 42926903
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgt--cttaaagagagcgacttgatcgtgactca 141  Q
    |||| |||| || ||||||||||||||||||||||  ||||||||||||||| ||||| ||||||||||  ||||||||||||| | |||||||||||||    
T  42926758 ttgtattatcctggaggcggcgtggttgatagtctaccttgcacaattttgggcagtgccacgaaacgtgtcttaaagagagcggcctgatcgtgactca 42926857  T
Q  142 acctagtaacaactttagtaaataatagaatttagaaatccaaata 187  Q
    |||||||||||||||  ||| |||||||||||| ||||||||||||    
T  42926858 acctagtaacaacttcggtagataatagaatttggaaatccaaata 42926903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 18344532 - 18344383
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||| |||||||||| |||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||| || |||||||    
T  18344532 tgggcttgttttatcctggagccggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgac 18344433  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||| |||||||||||||  ||  ||||||||||||  ||||||||||||    
T  18344432 tcaatctagtaacaacttcggttgataatagaatttgaaaatccaaatac 18344383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 39 - 172
Target Start/End: Original strand, 25497319 - 25497452
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||||||||| ||||||||| ||||| |||||| |||||||||||||||||||||||| || |||||||    
T  25497319 tgggcttgttttatcctggaggcggcgtggttgatagtctgacttgcacaaatttgggcagtgttacgaaacgtcttaaagagagcgacctggtcgtgac 25497418  T
Q  139 tcaacctagtaacaactttagtaaataatagaat 172  Q
    ||||||||||||||| ||  ||| ||||||||||    
T  25497419 tcaacctagtaacaatttcggtagataatagaat 25497452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 30658364 - 30658215
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||||||||| ||||||||||||||   |||| ||||||||||||||||||||||||| || |||||||    
T  30658364 tgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaagagagcgacctggtcgtgac 30658265  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||| ||||||||||||  ||| ||||||||| || ||||| |||||||    
T  30658264 tcaacatagtaacaacttcggtagataatagaacttggaaatgcaaatac 30658215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 35 - 188
Target Start/End: Complemental strand, 30631684 - 30631531
Alignment:
Q  35 cagttgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcg 134  Q
    |||||||| ||||||||| || |||| ||||||||||||||||| |||||||||||||| | || || ||||||| || |||||||||| ||| | ||||    
T  30631684 cagttgggcttgttttatcctggaggtggcgtggttgatagtctttcttgcacaatttttggcaatgccacgaaaagttttaaagagagtgacctaatcg 30631585  T
Q  135 tgactcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||||||  ||| ||||||||| || |||||||||||||    
T  30631584 tgactcaacctagtaacaacttcggtagataatagaacttggaaatccaaatac 30631531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 12797021 - 12796877
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||| |||||||||||||||||||||||| |||||||||| ||||| ||| ||||||||||||||||||||  || ||||||||||||    
T  12797021 ttgttttatcctggagacggcgtggttgatagtctgtcttgaacaattttgggcagtgccacaaaacgtcttaaagagagcgatctggtcgtgactcaac 12796922  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||| |||||||||  | | ||||||||||||  |||| |||||||    
T  12796921 ctaataacaacttcggcagataatagaatttgaaaattcaaatac 12796877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 58 - 188
Target Start/End: Complemental strand, 29677849 - 29677719
Alignment:
Q  58 aggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaacttt 157  Q
    ||||||| ||||||||||| || ||||||||||||| | ||||| ||| ||| ||||||| ||||||||| || |||||||||||||||||||||||||     
T  29677849 aggcggcttggttgatagtttgccttgcacaatttttggcagtgccactaaatgtcttaatgagagcgacctggtcgtgactcaacctagtaacaacttc 29677750  T
Q  158 agtaaataatagaatttagaaatccaaatac 188  Q
      || |||||||||||| |||||||||||||    
T  29677749 gctagataatagaatttggaaatccaaatac 29677719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 40847594 - 40847706
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| |  |||| ||||||||||||||| || ||||||||| |||| |||||| ||| |||||||||||||||| |||| || |||||||||||     
T  40847594 ttgttttatccaggaggtggcgtggttgatagtttgccttgcacaactttgaacagtgccacaaaacgtcttaaagagaacgacatggtcgtgactcaat 40847693  T
Q  144 ctagtaacaactt 156  Q
    |||||||||||||    
T  40847694 ctagtaacaactt 40847706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 17545297 - 17545410
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaa-agagagcgacttgatcgtgactcaa 142  Q
    ||||||||| || |||| ||||||||||||||||| | |||||||| |||| | |||||||||||||||||||| | | | |||| ||||||| ||||||    
T  17545297 ttgttttatcctcgaggtggcgtggttgatagtcttttttgcacaactttgaaaagtgtcacgaaacgtcttaagaaaaaacgacctgatcgtaactcaa 17545396  T
Q  143 cctagtaacaactt 156  Q
    ||||||||||||||    
T  17545397 cctagtaacaactt 17545410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 60 - 155
Target Start/End: Original strand, 21523735 - 21523829
Alignment:
Q  60 gcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaact 155  Q
    |||||||||||||||||||  ||||||||||||||| ||||| |||||||||| ||||||| ||| || || ||||||||||||||| ||||||||    
T  21523735 gcggcgtggttgatagtctcccttgcacaattttgggcagtgccacgaaacgt-ttaaagatagcaacctggtcgtgactcaacctattaacaact 21523829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 47 - 156
Target Start/End: Original strand, 19094497 - 19094606
Alignment:
Q  47 ttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaaccta 146  Q
    |||||| || ||||||| |||||||||| | || ||||||||||||||| ||||  ||  |||||| |||| ||||||||| ||||||||||||||||||    
T  19094497 ttttatcctggaggcggtgtggttgatattttgccttgcacaattttgggcagtaccaaaaaacgttttaaggagagcgacctgatcgtgactcaaccta 19094596  T
Q  147 gtaacaactt 156  Q
     |||||||||    
T  19094597 ataacaactt 19094606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 19578413 - 19578525
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||  || ||||| || |||||||||||||  ||||||||||||| |  |||| ||| ||||||||||||||||||||  || ||||||||||||    
T  19578413 ttgttttaccctggaggcagcatggttgatagtcttccttgcacaattttaggtagtgccacaaaacgtcttaaagagagcgatctggtcgtgactcaac 19578512  T
Q  144 ctagtaacaactt 156  Q
    ||| |||||||||    
T  19578513 ctaataacaactt 19578525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 20711516 - 20711429
Alignment:
Q  69 ttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactt 156  Q
    ||||||||||||||||||||||||||  |||||  ||||||| |||||||  ||| ||  || |||||||||||||||||||||||||    
T  20711516 ttgatagtctgtcttgcacaattttgagcagtgctacgaaacatcttaaaaggagtgatatggtcgtgactcaacctagtaacaactt 20711429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 57 - 150
Target Start/End: Complemental strand, 160124 - 160031
Alignment:
Q  57 gaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaa 150  Q
    |||||| || ||||||||| ||  |||||||||||||||  ||||||  ||||||| |||||||||||||| || ||||| |||||||||||||    
T  160124 gaggcgacgcggttgatagcctaccttgcacaattttgggtagtgtcgtgaaacgtattaaagagagcgacctggtcgtgtctcaacctagtaa 160031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 14104666 - 14104604
Alignment:
Q  64 cgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgac 127  Q
    ||||||||||||| ||| |||||||||||||  ||||| |||||||||||||||||||||||||    
T  14104666 cgtggttgatagtttgt-ttgcacaattttgagcagtgacacgaaacgtcttaaagagagcgac 14104604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 142
Target Start/End: Complemental strand, 5089373 - 5089277
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaa 142  Q
    |||||||| || ||| ||||||||||| ||||||  ||||||||| || ||| |||| | ||||||||||||||||||||||| || || ||||||||    
T  5089373 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactt-ggatagtgccgcgaaacgtcttaaagagagcgacctggtcatgactcaa 5089277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 42914737 - 42914639
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || ||| ||||||||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||||| |||| || |||||||||||||    
T  42914737 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagagaacgacctggtcgtgactcaacc 42914639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 39542936 - 39542900
Alignment:
Q  106 gaaacgtcttaaagagagcgacttgatcgtgactcaa 142  Q
    |||||||||||||||||||||| ||||||||||||||    
T  39542936 gaaacgtcttaaagagagcgacctgatcgtgactcaa 39542900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 42723451 - 42723546
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||  ||  |||| | ||||||||||||||||||||||| || ||||||||||    
T  42723451 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 42723546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 42728620 - 42728715
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||  ||  |||| | ||||||||||||||||||||||| || ||||||||||    
T  42728620 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 42728715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 44096397 - 44096302
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||  ||  |||| | ||||||||||||||||||||||| || ||||||||||    
T  44096397 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 44096302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 44754596 - 44754691
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||  ||  |||| | ||||||||||||||||||||||| || ||||||||||    
T  44754596 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 44754691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 44759762 - 44759857
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||  ||  |||| | ||||||||||||||||||||||| || ||||||||||    
T  44759762 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 44759857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 44957456 - 44957518
Alignment:
Q  64 cgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgac 127  Q
    |||||||||||||||| |||||||||||||   ||||| ||| |||||||||||||||| ||||    
T  44957456 cgtggttgatagtctg-cttgcacaattttttgcagtgccacaaaacgtcttaaagagaacgac 44957518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 174
Target Start/End: Original strand, 15489801 - 15489843
Alignment:
Q  132 tcgtgactcaacctagtaacaactttagtaaataatagaattt 174  Q
    |||||||||||||||||||||||||  ||| ||||||||||||    
T  15489801 tcgtgactcaacctagtaacaacttcggtagataatagaattt 15489843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 88 - 141
Target Start/End: Complemental strand, 32079430 - 32079377
Alignment:
Q  88 aattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||||||| ||||| |||  ||||||||||||| || |||||||||||||    
T  32079430 aattttggacagcgtcacaaaatttcttaaagagagcaacctgatcgtgactca 32079377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 7734695 - 7734596
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||| | || |||||| ||||||||||||  ||||||| |||| ||| ||||||||| |||||| ||| ||||  |||||| |  ||||||||||||    
T  7734695 ttgttttttcctagaggcgacgtggttgatagcatgtcttgtacaa-tttagacagtgtcgcgaaacatctaaaaggaagcgacctagtcgtgactcaac 7734597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 150
Target Start/End: Original strand, 39542566 - 39542610
Alignment:
Q  106 gaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaa 150  Q
    |||||||||||||||||| |||||  |||||||||||||| ||||    
T  39542566 gaaacgtcttaaagagagtgacttagtcgtgactcaacctggtaa 39542610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 40518472 - 40518567
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  ||||||| |||| ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  40518472 tgttttatcctggagacggcgcggttgctagtctaccttgcactatttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 40518567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 102; Significance: 7e-51; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 9881 - 10030
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||| || |||||||    
T  9881 tgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgac 9980  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| |||||||||||| |||||||||||||    
T  9981 tcaacctagtaacaacttcggtagataatagaatttggaaatccaaatac 10030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 7e-51; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 12501893 - 12502042
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || |||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||| || || ||||    
T  12501893 tgggcttgttttatcctggaggcggcgtggttgatagtctgttttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcatgac 12501992  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||||||| |||| |||||||||||| |||||||||||||    
T  12501993 tcaacctagtaacaacttcagtagataatagaatttggaaatccaaatac 12502042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 42001535 - 42001386
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||| || |||||||    
T  42001535 tgggcttgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgac 42001436  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| |||||||||||| |||||||||||||    
T  42001435 tcaacctagtaacaacttcggtagataatagaatttggaaatccaaatac 42001386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 6514600 - 6514744
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||| |||||| |||||||| ||||| ||||||||||||||||||||| |||||| ||||||||||||    
T  6514600 ttgttttatcctggaggcggcgtggttgatagtctgccttgcaaaattttgggcagtgccacgaaacgtcttaaagagagtgacttggtcgtgactcaac 6514699  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||| ||| |||||||||||| |||||||||||||    
T  6514700 ctagtaacaactttggtagataatagaatttggaaatccaaatac 6514744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 36 - 188
Target Start/End: Original strand, 29167964 - 29168116
Alignment:
Q  36 agttgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgt 135  Q
    ||||||| ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||| || ||||    
T  29167964 agttgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgt 29168063  T
Q  136 gactcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||||||||||  ||| |||||||||||| ||||| |||||||    
T  29168064 gactcaacctagtaacaacttcggtagataatagaatttggaaattcaaatac 29168116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 37652829 - 37652973
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  37652829 ttgttttatcctggaggtggcgtggttgatagtctgccttgcacaattttggacaatgtcacgaaacgtcttaaagagagcgacctgatcgtgactcaac 37652928  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||| |||||||||  ||| |||||||||||| |||||||||||||    
T  37652929 ctaataacaacttcggtagataatagaatttggaaatccaaatac 37652973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 36 - 188
Target Start/End: Complemental strand, 41996769 - 41996617
Alignment:
Q  36 agttgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgt 135  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||| || || ||||    
T  41996769 agttgggcttgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaagagagcaacctggtcgt 41996670  T
Q  136 gactcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||||||||||  ||| |||||||||||| |||||||||||||    
T  41996669 gactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatac 41996617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 6155413 - 6155562
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||| |||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  6155413 tgggcttgttttatcctggaggcggtgtggttgatagtctgtcttgtaaaattttggacagtgccacgaaacgtcttaaagagagcgacctgatcgtgac 6155512  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||| ||  ||| |||||||||||| |||||||||||||    
T  6155513 tcaacctagtaacaatttcggtagataatagaatttggaaatccaaatac 6155562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 39523145 - 39523000
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| || ||||||||||||    
T  39523145 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcggtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 39523046  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatact 189  Q
    |||||||||||||   || |||||||||||| ||||||||||||||    
T  39523045 ctagtaacaacttcgatagataatagaatttggaaatccaaatact 39523000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 556791 - 556647
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| ||| ||||||||||||||||||||| || ||||||||||||    
T  556791 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaac 556692  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||| |||||||||||| |||||||||||||    
T  556691 ctagtaacaacttcggtagataatagaatttggaaatccaaatac 556647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 561563 - 561419
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| ||| ||||||||||||||||||||| || ||||||||||||    
T  561563 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaac 561464  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||| |||||||||||| |||||||||||||    
T  561463 ctagtaacaacttcggtagataatagaatttggaaatccaaatac 561419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 26667368 - 26667224
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||| || ||||||||||||    
T  26667368 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 26667269  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||| |||||||||||| ||| |||||||||    
T  26667268 ctagtaacaacttcggtagataatagaatttggaactccaaatac 26667224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 26938965 - 26938821
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||| || ||||||||||||    
T  26938965 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 26938866  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||| |||||||||||| ||| |||||||||    
T  26938865 ctagtaacaacttcggtagataatagaatttggaactccaaatac 26938821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 39 - 185
Target Start/End: Original strand, 36942259 - 36942405
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| || |||||||||||||||||||||| || |||||||    
T  36942259 tgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgac 36942358  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaa 185  Q
    ||||||||||||||||||  ||| |||||||||||| ||||||||||    
T  36942359 tcaacctagtaacaacttcggtagataatagaatttggaaatccaaa 36942405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 36 - 188
Target Start/End: Complemental strand, 12103129 - 12102976
Alignment:
Q  36 agttgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgt 135  Q
    ||||||| ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||| || ||||    
T  12103129 agttgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgt 12103030  T
Q  136 gactcaacctagtaacaactttagtaaataatagaattt-agaaatccaaatac 188  Q
     ||||||||||||||||||||  ||| ||||||||||||  |||||||||||||    
T  12103029 aactcaacctagtaacaacttcggtagataatagaatttgggaaatccaaatac 12102976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 36423738 - 36423589
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||| | ||||||||||||||||||||||| || ||| |||    
T  36423738 tgggcttgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccgcgaaacgtcttaaagagagcgacctggtcgcgac 36423639  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| |||||||| ||| |||||||||||||    
T  36423638 tcaacctagtaacaacttcggtagataatagattttggaaatccaaatac 36423589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 7451854 - 7451710
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||    
T  7451854 ttgttttatcctggaggcagcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 7451755  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||| ||||||||||||  |||| |||||||    
T  7451754 ctagtaacaacttcggtagataatagaatttgaaaattcaaatac 7451710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 41587159 - 41587303
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||     
T  41587159 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgaacagtgtcacgaaacgtcttaaagagagcaacctggtcgtgactcaaa 41587258  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||| ||||||||||||  |||| |||||||    
T  41587259 ctagtaacaacttcggtagataatagaatttgaaaattcaaatac 41587303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 39 - 185
Target Start/End: Original strand, 36937505 - 36937651
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| || |||||||||||||||||||||| || |||||||    
T  36937505 tgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgac 36937604  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaa 185  Q
    |||||||| |||||||||  ||| |||||||||||| ||||||||||    
T  36937605 tcaacctaataacaacttcggtagataatagaatttggaaatccaaa 36937651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 12045138 - 12045279
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||| || ||||||||||||    
T  12045138 ttgttttatcctggaggcggcgtggtcgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagggcgacctggtcgtgactcaac 12045237  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaa 185  Q
    |||||||||||||  ||| |||||||||||| |||| |||||    
T  12045238 ctagtaacaacttcggtagataatagaatttggaaaaccaaa 12045279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 47 - 188
Target Start/End: Complemental strand, 40147988 - 40147847
Alignment:
Q  47 ttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaaccta 146  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||| ||||| ||||||||||||    
T  40147988 ttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctgatcatgactcaaccta 40147889  T
Q  147 gtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
     |||||||||   || |||||||||||| |||||||||||||    
T  40147888 ataacaacttcgatagataatagaatttggaaatccaaatac 40147847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 39 - 187
Target Start/End: Original strand, 37248789 - 37248937
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||||||||| ||||||||||||| |  |||| ||||||| ||||||||||||||||| || |||||||    
T  37248789 tgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggtagtgccacgaaatgtcttaaagagagcgacctggtcgtgac 37248888  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaata 187  Q
    ||||||||||||||||||  ||| |||||||||||| ||||||||||||    
T  37248889 tcaacctagtaacaacttcggtagataatagaatttggaaatccaaata 37248937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 39518506 - 39518362
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||| | ||||||||||||| | ||| ||||||||||||||||||||||||| || ||||||||||||    
T  39518506 ttgttttatcctggaggcggcgtggttgatagtctgccatgcacaattttgggcggtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 39518407  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||   || |||||||||||| |||||||||||||    
T  39518406 ctagtaacaacttcgatagataatagaatttggaaatccaaatac 39518362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 36428810 - 36428661
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||  | | ||||||||||||||||||||| || |||||||    
T  36428810 tgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagttccgcaaaacgtcttaaagagagcgacctggtcgtgac 36428711  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||   || |||||||||||| |||||||||||||    
T  36428710 tcaacctagtaacaacttcgttagataatagaatttggaaatccaaatac 36428661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 20181062 - 20181206
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    |||||||||  | |||| ||||||||| ||||||||||||||| ||||||||||| || ||||||||||||||||||||| ||| || ||||||||||||    
T  20181062 ttgttttatcatggaggtggcgtggttaatagtctgtcttgcataattttggacaatgccacgaaacgtcttaaagagagtgacctggtcgtgactcaac 20181161  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||| |||||| || |||| |||||||||||| |||||||||||||    
T  20181162 ctaataacaatttcagtagataatagaatttggaaatccaaatac 20181206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 39 - 172
Target Start/End: Original strand, 10759814 - 10759946
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| ||| |||||||||||| |||||||| || |||||||    
T  10759814 tgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaa-agagcgacctggtcgtgac 10759912  T
Q  139 tcaacctagtaacaactttagtaaataatagaat 172  Q
    ||||||||||||||||||  ||| ||||||||||    
T  10759913 tcaacctagtaacaacttcggtagataatagaat 10759946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 44 - 174
Target Start/End: Complemental strand, 3666028 - 3665898
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||| |||||||||||||||||| ||||||||||||||| ||||| ||||||||||||| ||||||||||| |  ||||||||||||    
T  3666028 ttgttttatcctagaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttgaagagagcgacctagtcgtgactcaac 3665929  T
Q  144 ctagtaacaactttagtaaataatagaattt 174  Q
    |||||||||||||  ||| | ||||||||||    
T  3665928 ctagtaacaacttcggtagaaaatagaattt 3665898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 32461548 - 32461683
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||| || ||||||||||||    
T  32461548 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaac 32461647  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
             ||||  ||| ||||||||||||||||||||||||||    
T  32461648 ---------acttcggtagataatagaatttagaaatccaaatac 32461683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 35679874 - 35680021
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||| ||  | |||||||||    
T  35679874 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaatttttgacagtgccacgaaacgtcttaaagagagcgacctg-ccatgactcaac 35679972  T
Q  144 ctagtaacaactttagtaaataata----gaatttagaaatccaaatac 188  Q
    ||||||||| |||  ||| ||||||    |||||| |||||||||||||    
T  35679973 ctagtaacagcttcggtagataatataatgaatttggaaatccaaatac 35680021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 11981279 - 11981418
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgt-gactcaa 142  Q
    |||||||||||| |||||||||||||||||  |||||||||||||||||||| ||||| ||| |||||||||||||| |||||| || || |  | ||||    
T  11981279 ttgttttattctggaggcggcgtggttgat--tctgtcttgcacaattttgggcagtgccacaaaacgtcttaaagaaagcgacctggtcataaaatcaa 11981376  T
Q  143 cctagtaacaactttagtaaataatagaatttagaaatccaa 184  Q
    ||||||||||||||  ||| |||||||||||| |||||||||    
T  11981377 cctagtaacaacttcggtagataatagaatttggaaatccaa 11981418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 44 - 187
Target Start/End: Original strand, 12041931 - 12042076
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca-- 141  Q
    ||||||||| || |||||||||||||||||||| || |||||| | |||||| ||||| |||||||||||||||||||| |||| || ||||||||||      
T  12041931 ttgttttatcctggaggcggcgtggttgatagtttgccttgcatatttttgggcagtgccacgaaacgtcttaaagagaacgacctggtcgtgactcatg 12042030  T
Q  142 acctagtaacaactttagtaaataatagaatttagaaatccaaata 187  Q
    ||||||||||||||| |||| |||| | |||||  |||||||||||    
T  12042031 acctagtaacaacttcagtagataacataatttgaaaatccaaata 12042076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 12102830 - 12102942
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || | | ||| ||||||||||||||  ||||||||||||||| ||||| ||| ||| ||||||||||||||||| |  ||||||||||||    
T  12102830 ttgttttatcctggtgacggtgtggttgatagtcttccttgcacaattttggccagtgccacaaaaagtcttaaagagagcgacctagtcgtgactcaac 12102929  T
Q  144 ctagtaacaactt 156  Q
    |||||||||||||    
T  12102930 ctagtaacaactt 12102942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 57 - 156
Target Start/End: Original strand, 16116261 - 16116360
Alignment:
Q  57 gaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactt 156  Q
    |||| ||||||||||||||| |||||||||||||||||| |||||||||||||||| |||| |||||| || |  |||||||| ||||||| ||||||||    
T  16116261 gaggtggcgtggttgatagtttgtcttgcacaattttgggcagtgtcacgaaacgttttaaggagagcaacctagtcgtgacttaacctagcaacaactt 16116360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 24435869 - 24435964
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||||||||||||||||  ||||||||| || ||| |||| | ||||||||||||||||||||||| || ||||||||||    
T  24435869 tgttttatcctggagacggcgtggttgatagtctaccttgcacaactt-ggatagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 24435964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 57 - 156
Target Start/End: Original strand, 15414893 - 15414992
Alignment:
Q  57 gaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactt 156  Q
    |||||||||||||||||| |||| ||  ||||||||||| ||||| ||| ||||| |||||||||||||   |  ||||||||||||| |||||||||||    
T  15414893 gaggcggcgtggttgatattctgcctcacacaattttgggcagtgccacaaaacgacttaaagagagcgttctagtcgtgactcaaccaagtaacaactt 15414992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 18265524 - 18265586
Alignment:
Q  64 cgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgac 127  Q
    ||||||||||||||||  |||||||||||| | ||||||||| |||||||||||||||||||||    
T  18265524 cgtggttgatagtctga-ttgcacaattttaggcagtgtcacaaaacgtcttaaagagagcgac 18265586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 37550031 - 37550085
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggaca 98  Q
    ||||||||| || |||| |||||||||||||||||| ||||||||||||||||||    
T  37550031 ttgttttatcctggaggtggcgtggttgatagtctgccttgcacaattttggaca 37550085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 13582690 - 13582785
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||||||||| ||||||  ||||||||| || ||  |||| | ||||||||||||||||||||||| || ||||||||||    
T  13582690 tgttttatcctggagacggcgtggttgttagtctaccttgcacaaattgggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 13582785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 7805166 - 7805068
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || ||| ||||||||||| ||||||  ||||||||| || ||  |||| | ||||||||||||||||||| ||| || |||||||||||||    
T  7805166 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgccgcgaaacgtcttaaagagagggacctggtcgtgactcaacc 7805068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 14374230 - 14374132
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || ||| ||||||||||| ||||||  | ||||||| || ||  |||| | ||||||||||||||||||||||| || |||||||||||||    
T  14374230 tgttttatcctggagacggcgtggttgttagtctaccctgcacaacttgggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 14374132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 156
Target Start/End: Complemental strand, 9911233 - 9911137
Alignment:
Q  60 gcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactt 156  Q
    |||||||| ||| ||||||| |  ||||||||||| |||||| ||| ||| |||||||| ||| |||| |  || | ||||||||||||||||||||    
T  9911233 gcggcgtgattggtagtctgccccgcacaattttgaacagtgccacaaaatgtcttaaaaagaacgacattgtcctaactcaacctagtaacaactt 9911137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 36253921 - 36253826
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||||||||| ||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  36253921 tgttttatcctggaggcggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 36253826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 1414050 - 1414155
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    |||||||||  | ||| ||||| ||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||| |||||| ||||||||||||| |    
T  1414050 ttgttttatcttggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctgatcgtgactcacc 1414148  T
Q  144 ctagtaa 150  Q
    | |||||    
T  1414149 ccagtaa 1414155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 31986769 - 31986723
Alignment:
Q  98 agtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||| |||||||||||||||| |||||| | ||||||||||||||    
T  31986769 agtgtcgcgaaacgtcttaaagaaagcgaccttatcgtgactcaacc 31986723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 142
Target Start/End: Original strand, 32287969 - 32288015
Alignment:
Q  96 acagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaa 142  Q
    ||||||||||||||| ||||||||| || ||||||| ||||||||||    
T  32287969 acagtgtcacgaaacatcttaaagaaagtgacttgaccgtgactcaa 32288015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 17510153 - 17510058
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  17510153 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 17510058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 37550089 - 37550144
Alignment:
Q  132 tcgtgactcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||| || ||||||  ||| |||||||||||| |||||||||||||    
T  37550089 tcgtgactcaacctaata-caacttcggtagataatagaatttggaaatccaaatac 37550144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 7e-51; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 23666117 - 23666266
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||| || |||||||    
T  23666117 tgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgac 23666216  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| |||||||||||| |||||||||||||    
T  23666217 tcaacctagtaacaacttcggtagataatagaatttggaaatccaaatac 23666266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 24038365 - 24038514
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||| || |||||||    
T  24038365 tgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgac 24038464  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| |||||||||||| |||||||||||||    
T  24038465 tcaacctagtaacaacttcggtagataatagaatttggaaatccaaatac 24038514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 7571217 - 7571361
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| || ||||||||||||    
T  7571217 ttgttttatcctggaggcggcgtgattgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 7571316  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||| |||||||||||| |||||||||||||    
T  7571317 ctagtaacaacttcggtagataatagaatttggaaatccaaatac 7571361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 55431409 - 55431265
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  55431409 ttgttttatcctggaggcggcgtggttgatagtctgccttgcataatttttgacagtgtcacgaaacgtcttaaagagagcgacctgatcgtgactcaac 55431310  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||| ||||||||| || | |||||||||||| |||||||||||||    
T  55431309 ctaataacaacttcagcagataatagaatttggaaatccaaatac 55431265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 44 - 189
Target Start/End: Complemental strand, 3033738 - 3033593
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||| || |||||||||||||||||||||| || ||||||||||||    
T  3033738 ttgttttatccttgaggcggtgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaac 3033639  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatact 189  Q
    |||||||||||||  ||| |||||||||||| ||||||||||||||    
T  3033638 ctagtaacaacttcggtagataatagaatttggaaatccaaatact 3033593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 35 - 188
Target Start/End: Complemental strand, 3419098 - 3418945
Alignment:
Q  35 cagttgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcg 134  Q
    |||||| | ||||||||| ||  ||| |||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||| |||    
T  3419098 cagttgagcttgttttatcctgaaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacttggtcg 3418999  T
Q  135 tgactcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||||||  ||| |||||||||||| |||||||||||||    
T  3418998 tgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatac 3418945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 3672685 - 3672536
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| || |||||||||||||||||||||| || |||||||    
T  3672685 tgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgac 3672586  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| |||||||||||| |||||||||||||    
T  3672585 tcaacctagtaacaacttcggtagataatagaatttggaaatccaaatac 3672536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 3692717 - 3692568
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| || |||||||||||||||||||||| || |||||||    
T  3692717 tgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgac 3692618  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| |||||||||||| |||||||||||||    
T  3692617 tcaacctagtaacaacttcggtagataatagaatttggaaatccaaatac 3692568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 39775727 - 39775871
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||| || ||||||||||||    
T  39775727 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 39775826  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||| ||||||  ||| |||||||||||| |||||||||||||    
T  39775827 ctagtagcaacttcggtagataatagaatttggaaatccaaatac 39775871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 8069778 - 8069629
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| || |||||||    
T  8069778 tgggcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattt-ggacagtgccacgaaacgtcttaaagagagcgacctggtcgtgac 8069680  T
Q  139 tcaacctagtaacaactttagtaaat-aatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| || |||||||||| |||||||||||||    
T  8069679 tcaacctagtaacaacttcggtagataaatagaatttggaaatccaaatac 8069629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 758362 - 758511
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||||||||| |||||||||||||||  |||| ||||||||||||||||||||||||  || |||||||    
T  758362 tgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagagcgatctggtcgtgac 758461  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| |||||||||||| |||||||||||||    
T  758462 tcaacctagtaacaacttcggtagataatagaatttggaaatccaaatac 758511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 8883269 - 8883120
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| || |||||||    
T  8883269 tgggcttgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgac 8883170  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    || |||||||||||||||  ||| ||||||||||||  ||||||||||||    
T  8883169 tcgacctagtaacaacttcggtagataatagaatttgaaaatccaaatac 8883120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 43 - 188
Target Start/End: Complemental strand, 8888025 - 8887880
Alignment:
Q  43 tttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaa 142  Q
    |||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||  || ||||||||||||||||||||| || |||||||||||    
T  8888025 tttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttggacagtgcaacaaaacgtcttaaagagagcgacctggtcgtgactcaa 8887926  T
Q  143 cctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||  ||| |||||||||||| ||||| |||||||    
T  8887925 cctagtaacaacttcggtagataatagaatttggaaattcaaatac 8887880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 18467319 - 18467175
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||||||||||| |||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||| || ||||||||||||    
T  18467319 ttgttttatcctggaggcggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 18467220  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||| ||||||||||||  ||||||||||||    
T  18467219 ctagtaacaacttcggtagataatagaatttgaaaatccaaatac 18467175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 14438689 - 14438838
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||| ||||| |||||||||||||||  |||| ||||||||||||||||||| ||||| || |||||||    
T  14438689 tgggcttgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagggcgacctggtcgtgac 14438788  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| ||||||||| || |||||||||||||    
T  14438789 tcaacctagtaacaacttcggtagataatagaacttggaaatccaaatac 14438838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 3657239 - 3657383
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    |||||||||  | |||| ||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||  | |||||||||||||    
T  3657239 ttgttttatcttggaggtggcatggttgatagtctgtcttgcacaattttgaacagtgccacgaaacgtcttaaagagagcgatctaatcgtgactcaac 3657338  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
     ||||||||||||  ||| |||||||||||||||||| |||||||    
T  3657339 atagtaacaacttcggtagataatagaatttagaaattcaaatac 3657383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 29350334 - 29350190
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||||| |||| ||| ||||| ||||||||||||||| ||||| |||||||||||||||||| |||||| || ||||||||||||    
T  29350334 ttgttttatcctggaggcggcatggtagatggtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagaaagcgacatggtcgtgactcaac 29350235  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||| |||||||||||| |||||||||||||    
T  29350234 ctagtaacaacttcggtagataatagaatttggaaatccaaatac 29350190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 29715738 - 29715594
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||| |||||||  || ||||||||||||    
T  29715738 ttgttttatcctagaggcggcgtggttgatagtcttcctagcacaattttggacagtgtcacgaaacgtcttaaaaagagcgatctggtcgtgactcaac 29715639  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||| |||||||||  ||| |||||||||||| |||||| ||||||    
T  29715638 ctaataacaacttcggtagataatagaatttggaaatctaaatac 29715594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 49971423 - 49971567
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||| ||||||||||| |||||||||||||||| |||| |||||||||||||||||||| |||| || ||||||||||||    
T  49971423 ttgttttatcctggaggcggcgtgattgatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaagagatcgacctggtcgtgactcaac 49971522  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||| |||||| || || |||||||||||||    
T  49971523 ctagtaacaacttcggtagataataaaacttggaaatccaaatac 49971567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 18472106 - 18471958
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||||||||| ||||||||||||| | ||||| |||||| | || ||||||||||||| || |||||||    
T  18472106 tgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaa-catcgtaaagagagcgacctggtcgtgac 18472008  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| |||||||||||| |||||||||||||    
T  18472007 tcaacctagtaacaacttcggtagataatagaatttggaaatccaaatac 18471958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 12965872 - 12966016
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| ||  ||||||||||||||||||||| || | |||||||||     
T  12965872 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccataaaacgtcttaaagagagcgacctggttgtgactcaat 12965971  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||| || ||||||||| |||| ||||||||    
T  12965972 ctagtaacaacttcggtagatcatagaatttggaaacccaaatac 12966016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 20520148 - 20520004
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    |||||||||  | ||||||||||||||||||||||  |||||||||| |||| ||||| ||||||||||||||||||||| ||| || ||||||||||||    
T  20520148 ttgttttatcttggaggcggcgtggttgatagtctcccttgcacaatcttgggcagtgccacgaaacgtcttaaagagagtgacctggtcgtgactcaac 20520049  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||   || |||||||||||| |||||||||||||    
T  20520048 ctagtaacaacttcgctagataatagaatttggaaatccaaatac 20520004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 39 - 185
Target Start/End: Original strand, 32474674 - 32474818
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||  |||||||||| || ||||| |    
T  32474674 tgggcttgttttatcctggagacggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctt--agagagcgacctggtcgtggc 32474771  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaa 185  Q
    |||| |||||||||||||  ||| |||||||||||| ||||||||||    
T  32474772 tcaatctagtaacaacttcggtagataatagaatttggaaatccaaa 32474818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 12112640 - 12112752
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |  |||||| |||||    
T  12112640 ttgttttatcctggaggcggtgtggttgatagtctgtcttgcacaactttggacagtgccacgaaacgtcttaaagagagcgacctagtcgtgattcaac 12112739  T
Q  144 ctagtaacaactt 156  Q
    |||||||||||||    
T  12112740 ctagtaacaactt 12112752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 12971624 - 12971744
Alignment:
Q  36 agttgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgt 135  Q
    ||||||| ||||||||| || ||||||||||| |||||| |||||||||||||||||||| || || ||||||||||||||||||||| ||| || ||||    
T  12971624 agttgggcttgttttatcctagaggcggcgtgattgataatctgtcttgcacaattttgggcaatgccacgaaacgtcttaaagagagagacctggtcgt 12971723  T
Q  136 gactcaacctagtaacaactt 156  Q
    || ||||||||||||||||||    
T  12971724 gagtcaacctagtaacaactt 12971744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 88 - 188
Target Start/End: Complemental strand, 27708928 - 27708828
Alignment:
Q  88 aattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactttagtaaataatagaatttagaaatccaaata 187  Q
    |||||||| ||||| |||||||||||||||||||| |||| || |||||||||||||||||||||||||  ||| |||||||||||| ||||||||||||    
T  27708928 aattttgggcagtgccacgaaacgtcttaaagagaacgacctggtcgtgactcaacctagtaacaacttcggtatataatagaatttggaaatccaaata 27708829  T
Q  188 c 188  Q
    |    
T  27708828 c 27708828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 23661458 - 23661593
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| |||||              |||||| || |||||||    
T  23661458 tgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacga--------------agcgacctggtcgtgac 23661543  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| |||||||||||| |||||||||||||    
T  23661544 tcaacctagtaacaacttcggtagataatagaatttggaaatccaaatac 23661593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 17026128 - 17026213
Alignment:
Q  68 gttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaa 153  Q
    |||||||||||||||||||||| ||| ||| ||||||  |||||||||||||||||||| |||||||||||| |||||| ||||||    
T  17026128 gttgatagtctgtcttgcacaaatttagacggtgtcagaaaacgtcttaaagagagcgaattgatcgtgacttaacctattaacaa 17026213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 44 - 161
Target Start/End: Original strand, 19276919 - 19277036
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    |||||||||||| |||||  |||||||||||||||||||| ||||||||| ||||||| ||| ||| |||||||| ||||  || | || || |||||||    
T  19276919 ttgttttattctagaggcaacgtggttgatagtctgtcttacacaattttcgacagtgccacaaaaagtcttaaaaagagaaaccttattgtaactcaac 19277018  T
Q  144 ctagtaacaactttagta 161  Q
     || ||||||||||||||    
T  19277019 ttaataacaactttagta 19277036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 16013801 - 16013718
Alignment:
Q  47 ttttattcttgaggcggcgtggttgatagtctgtcttgcacaa-ttttggacagtgtcacgaaacgtcttaaagagagcgactt 129  Q
    |||||| || ||||||||||||| |||||||| |||||||||| |||| || |||||||||||||||||||||||||| |||||    
T  16013801 ttttatcctggaggcggcgtggtggatagtctatcttgcacaatttttagatagtgtcacgaaacgtcttaaagagagtgactt 16013718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 48435847 - 48435909
Alignment:
Q  64 cgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgac 127  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||    
T  48435847 cgtggttgatagtctg-cttgcactattttgaacagtgtcacgaaacgtcttaaagagagcgac 48435909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 65 - 153
Target Start/End: Complemental strand, 28125189 - 28125102
Alignment:
Q  65 gtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaa 153  Q
    |||||| ||||||||||||||||||||||   ||||| ||||||| |||||||| ||||| || || ||||||||||||||||||||||    
T  28125189 gtggttaatagtctgtcttgcacaattttaagcagtgccacgaaatgtcttaaa-agagcaacctggtcgtgactcaacctagtaacaa 28125102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 188
Target Start/End: Original strand, 2207760 - 2207850
Alignment:
Q  98 agtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||| ||| |||||||||||| |||||||| || ||||||||||| ||||| |||||||   |||||||||||||||| |||| |||||||    
T  2207760 agtgccactaaacgtcttaaaaagagcgacctggtcgtgactcaatctagtgacaacttcgataaataatagaatttaaaaattcaaatac 2207850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 115
Target Start/End: Complemental strand, 27709035 - 27708959
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtctt 115  Q
    |||| ||||||||| || ||||||||||||||||||||||  |||||| |||||||| ||||| || ||||||||||    
T  27709035 tgggcttgttttatcctggaggcggcgtggttgatagtctaccttgcataattttgggcagtgccatgaaacgtctt 27708959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 16983070 - 16983008
Alignment:
Q  64 cgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgac 127  Q
    ||||||||||| ||| |||| |||||||||||||||||||| ||||||||||||| ||||||||    
T  16983070 cgtggttgatattct-tctttcacaattttggacagtgtcatgaaacgtcttaaaaagagcgac 16983008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 38436991 - 38437089
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || ||| ||||||||||| ||||||  ||| ||||| || ||| |||| |||||||||||||||||| || ||| ||||||||||||||||    
T  38436991 tgttttatcctggagacggcgtggttgttagtctacctttcacaactt-ggatagtgccacgaaacgtcttaaagaaagtgacctgatcgtgactcaacc 38437089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 48432484 - 48432422
Alignment:
Q  64 cgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgac 127  Q
    ||||||||||||||||| || ||||||||||| ||||| ||| |||||||||||||||||||||    
T  48432484 cgtggttgatagtctgtttt-cacaattttgggcagtgccacaaaacgtcttaaagagagcgac 48432422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 53119622 - 53119524
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || ||| ||||||||||| ||||||  ||||||||| ||  |  |||| | ||||||||||||||||||||||| ||||||||||||||||    
T  53119622 tgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgagt-agtgccgcgaaacgtcttaaagagagcgacctgatcgtgactcaacc 53119524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 46964111 - 46964031
Alignment:
Q  42 gtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagaga 122  Q
    ||||||||||| || |||| ||| ||| ||||||||||  ||||||||||||  |||||| || |||||||||||||||||    
T  46964111 gtttgttttatcctagaggtggcatgggtgatagtctgcattgcacaattttaaacagtgccatgaaacgtcttaaagaga 46964031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 149
Target Start/End: Original strand, 25726830 - 25726897
Alignment:
Q  82 ttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagta 149  Q
    |||||||||| |||  |||| | ||||||||||||||||||||||| || ||||||||||| ||||||    
T  25726830 ttgcacaattctgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaatctagta 25726897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 33089343 - 33089441
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || ||| ||||||||||| ||||||  ||||||||| |  ||  |||| | ||||||||||||||||||||||| || |||||||||||||    
T  33089343 tgttttatcctagagacggcgtggttgttagtctaccttgcacaactagggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 33089441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 1641092 - 1641149
Alignment:
Q  65 gtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagaga 122  Q
    |||||||||||||||||||  |||||||| | ||||||| | ||||||||||||||||    
T  1641092 gtggttgatagtctgtcttttacaatttttggcagtgtcgcaaaacgtcttaaagaga 1641149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 150
Target Start/End: Complemental strand, 26962154 - 26962050
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || ||| ||||||| ||| ||||||  ||||||||| ||  |  |||| ||||||||||||||||||||||||  || |||||||||||||    
T  26962154 tgttttatcctggagacggcgtgtttgttagtctaccttgcacaacttgtgt-agtgccacgaaacgtcttaaagagagcgatctggtcgtgactcaacc 26962056  T
Q  145 tagtaa 150  Q
     |||||    
T  26962055 cagtaa 26962050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 27605195 - 27605240
Alignment:
Q  105 cgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaa 150  Q
    ||||| |||||||||||||||||||| |||||||||||||| ||||    
T  27605195 cgaaatgtcttaaagagagcgacttggtcgtgactcaacctggtaa 27605240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 20090662 - 20090757
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||  ||  |||| | ||||||||||||||||||||||| || ||||||||||    
T  20090662 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 20090757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 20095787 - 20095882
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||  ||  |||| | ||||||||||||||||||||||| || ||||||||||    
T  20095787 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 20095882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 20507747 - 20507679
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgt 112  Q
    ||||||||| || |||| || ||||||||||||||| ||||||||||||||  ||||| ||| ||||||    
T  20507747 ttgttttatcctagaggtggtgtggttgatagtctgccttgcacaattttgagcagtgccaccaaacgt 20507679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 34129169 - 34129264
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||| ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  34129169 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 34129264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 13022122 - 13022024
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || ||| ||||||||||| ||||||  ||||||||| || ||  |||| | |||||||| ||||| |||||||| || |||||||||||||    
T  13022122 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgccgcgaaacgttttaaaaagagcgacctggtcgtgactcaacc 13022024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 15768250 - 15768295
Alignment:
Q  105 cgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaa 150  Q
    ||||||||||||||||||||||| || |||||||||| || |||||    
T  15768250 cgaaacgtcttaaagagagcgacctggtcgtgactcatcccagtaa 15768295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 3476946 - 3477041
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  3476946 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 3477041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 7806553 - 7806656
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||| ||||||||||||||||  ||   |||||||| |  ||||||  ||| |||||||||||||||||| || |||  |||||||    
T  7806553 ttgttttatcctcgaggcagcgtggttgatagtctacct---acaattttaggtagtgtcgtgaatcgtcttaaagagagcgacctggtcgcaactcaac 7806649  T
Q  144 ctagtaa 150  Q
    || ||||    
T  7806650 ctggtaa 7806656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 15763089 - 15763125
Alignment:
Q  105 cgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    ||||||||||||||||||||||| || ||||||||||    
T  15763089 cgaaacgtcttaaagagagcgacctggtcgtgactca 15763125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 17368814 - 17368719
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  17368814 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 17368719  T

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Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 142
Target Start/End: Original strand, 28940178 - 28940258
Alignment:
Q  62 ggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaa 142  Q
    ||||||||||||||||| ||||| | ||||||||| |||| | || ||| ||||||| ||| |||||| | ||||| ||||    
T  28940178 ggcgtggttgatagtctatcttgtataattttggatagtgccgcggaacatcttaaaaagaacgacttcaacgtgattcaa 28940258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 7200 - 7056
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||| || ||||||||||||    
T  7200 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 7101  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||| |||||||||||| |||||||||||||    
T  7100 ctagtaacaacttcggtagataatagaatttggaaatccaaatac 7056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 35730 - 35586
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| | || |||| ||| |||    
T  35730 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggccagtgtcacgaaacgtcttaaagagagcggcatggtcgtaacttaac 35631  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||    
T  35630 ctagtaacaacttcagtaaataatagaatttggaaatccaaatac 35586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 3e-50; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 31449865 - 31450009
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| || ||||||||||||    
T  31449865 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 31449964  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||   || |||||||||||| |||||||||||||    
T  31449965 ctagtaacaacttcgatagataatagaatttggaaatccaaatac 31450009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 42 - 188
Target Start/End: Original strand, 18876364 - 18876509
Alignment:
Q  42 gtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||| || ||||||||||    
T  18876364 gtttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaa-agagcgacctggtcgtgactca 18876462  T
Q  142 acctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||||  ||| |||||||||||| |||||||||||||    
T  18876463 acctagtaacaacttcggtatataatagaatttggaaatccaaatac 18876509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 33416648 - 33416499
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| |||||||||  | ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||| || |||||||    
T  33416648 tgggcttgttttatcttggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagaccgacctggtcgtgac 33416549  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| |||||||||||| ||||| |||||||    
T  33416548 tcaacctagtaacaacttcggtagataatagaatttggaaattcaaatac 33416499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 17026031 - 17025887
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||| |||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||| || ||||||||||||    
T  17026031 ttgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 17025932  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||| |||||||||||| |||||||||||||    
T  17025931 ctagtaacaacttcggtagataatagaatttggaaatccaaatac 17025887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 17556523 - 17556379
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||| |||| |||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||| || ||||||||||||    
T  17556523 ttgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 17556424  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||| |||||||||||| |||||||||||||    
T  17556423 ctagtaacaacttcggtagataatagaatttggaaatccaaatac 17556379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 25 - 172
Target Start/End: Original strand, 2355439 - 2355586
Alignment:
Q  25 atatatatatcagttgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagc 124  Q
    |||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||     
T  2355439 atatatatattagttgggtttgttttatctttgaggcggcgtggttgatagtctgtcttgcacaattttgaaaagtgtcacgaaacgtcttaaaaagagt 2355538  T
Q  125 gacttgatcgtgactcaacctagtaacaactttagtaaataatagaat 172  Q
    ||  || | ||||||||| |||||||||||||| ||| ||||||||||    
T  2355539 gatatggtggtgactcaatctagtaacaactttggtagataatagaat 2355586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 34118567 - 34118418
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| ||  ||||| |||||||||||||||| ||||||||||||||| ||||| || |||||||||||||||||||||| || |||||||    
T  34118567 tgggcttgttttatcctaaaggcgacgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgac 34118468  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||||||| |||| |||||||||||| |||||| ||||||    
T  34118467 tcaacctagtaacaacttcagtagataatagaatttggaaatctaaatac 34118418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 44925922 - 44926066
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||| |||||||||||||| || ||||||||||||    
T  44925922 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgttttaaagagagcgacctggtcgtgactcaac 44926021  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||| |||| |||||||  ||||||||||||    
T  44926022 ctagtaacaacttcggtagataaaagaatttgaaaatccaaatac 44926066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 47 - 173
Target Start/End: Complemental strand, 1807565 - 1807439
Alignment:
Q  47 ttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaaccta 146  Q
    |||||| || ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |  |||||||||||||||    
T  1807565 ttttatcctagaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacctagtcgtgactcaaccta 1807466  T
Q  147 gtaacaactttagtaaataatagaatt 173  Q
    ||||||||||  ||| |||||||||||    
T  1807465 gtaacaacttcggtagataatagaatt 1807439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 19166730 - 19166618
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||| | ||||||||||||| ||||| ||||||||||||||||||||||||| || ||||||||||||    
T  19166730 ttgttttatcctggaggcggcgtggttgatagtctgccgtgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatggtcgtgactcaac 19166631  T
Q  144 ctagtaacaactt 156  Q
    |||||||||||||    
T  19166630 ctagtaacaactt 19166618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 188
Target Start/End: Original strand, 28559670 - 28559797
Alignment:
Q  61 cggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactttagt 160  Q
    |||||||||||||||| || ||||||||||||||||||||| |||||||||||||| |||||||||| |  |||||||||||||||||||||||||  ||    
T  28559670 cggcgtggttgatagtttgccttgcacaattttggacagtgccacgaaacgtcttatagagagcgacattgtcgtgactcaacctagtaacaacttcggt 28559769  T
Q  161 aaataatagaatttagaaatccaaatac 188  Q
    | |||||| |||||| ||||||||||||    
T  28559770 agataatataatttataaatccaaatac 28559797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 4238337 - 4238458
Alignment:
Q  67 ggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactttagtaaataa 166  Q
    ||||||||||||| ||||||||||||||| ||||| || ||||||| |||||||||||||| || |||||||||||||||||||||||||  ||| ||||    
T  4238337 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtgttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataa 4238436  T
Q  167 tagaatttagaaatccaaatac 188  Q
    |||||||| |||||||||||||    
T  4238437 tagaatttggaaatccaaatac 4238458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 39 - 156
Target Start/End: Original strand, 40125879 - 40125996
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| |||||||||  | ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||  || |||||||    
T  40125879 tgggcttgttttatcttggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgatctggtcgtgac 40125978  T
Q  139 tcaacctagtaacaactt 156  Q
    ||||||||||||||||||    
T  40125979 tcaacctagtaacaactt 40125996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 38182236 - 38182379
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||||||||||||||| |||| |||||||||| ||||  |||| |||||||||| |||||||||||||| || ||||||||||||    
T  38182236 ttgttttatcctggaggcggcgtggttgataatctgccttgcacaatcttgggaagtgccacgaaacgttttaaagagagcgacctggtcgtgactcaac 38182335  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    || ||||||||||  ||| |||||||||||| |||||||||||||    
T  38182336 ct-gtaacaacttcggtagataatagaatttggaaatccaaatac 38182379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 81 - 188
Target Start/End: Original strand, 40130722 - 40130829
Alignment:
Q  81 cttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactttagtaaataatagaatttagaaat 180  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||  ||| |||||||||||| |||||    
T  40130722 cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaat 40130821  T
Q  181 ccaaatac 188  Q
    ||||||||    
T  40130822 ccaaatac 40130829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 4243076 - 4243197
Alignment:
Q  67 ggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactttagtaaataa 166  Q
    ||||||||||||| ||||||||||||||| ||||| || ||||||| |||||||||||||| || |||||||||||||||||||||||||   || ||||    
T  4243076 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtgttaaagagagcgacctggtcgtgactcaacctagtaacaacttcgatagataa 4243175  T
Q  167 tagaatttagaaatccaaatac 188  Q
    |||||||| |||||||||||||    
T  4243176 tagaatttggaaatccaaatac 4243197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 1910968 - 1911112
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||| |||||||||||||||||  |||||||||||||   |||| ||||||||||||||||||||||||| ||||||||||| |||    
T  1910968 ttgttttatactggaggcagcgtggttgatagtctgctttgcacaattttgactagtgccacgaaacgtcttaaagagagcgacctgatcgtgacttaac 1911067  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||| |||||||||   || ||||||||||||  ||||||||||||    
T  1911068 ctaataacaacttcgatagataatagaatttgaaaatccaaatac 1911112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 17953872 - 17953984
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    |||||||||  | |||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||| |||||| || |||| |||||||    
T  17953872 ttgttttatcttggaggcggcgtggttgatattctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagaaagcgacatggtcgttactcaac 17953971  T
Q  144 ctagtaacaactt 156  Q
    |||||||||||||    
T  17953972 ctagtaacaactt 17953984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 15875667 - 15875779
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||||||| || |||| ||||||     
T  15875667 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcctaaagagagcgacctggtcgtaactcaat 15875766  T
Q  144 ctagtaacaactt 156  Q
     ||||||||||||    
T  15875767 ttagtaacaactt 15875779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 44 - 155
Target Start/End: Complemental strand, 36683675 - 36683564
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||| ||||||||||||||||| ||| ||||||||||| ||||| ||||||||||||||||||||||||| |  || |||||||||    
T  36683675 ttgttttatcctggaggcagcgtggttgatagtctgccttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctagtcatgactcaac 36683576  T
Q  144 ctagtaacaact 155  Q
    ||||||||||||    
T  36683575 ctagtaacaact 36683564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 23548631 - 23548743
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||| |||||||||||||| | |||||||||||||  |||||| |||||||||||||| ||||||||||  | ||||||||||||    
T  23548631 ttgttttatcctagaggcgacgtggttgatagtccgccttgcacaattttacacagtgccacgaaacgtcttatagagagcgaccaggtcgtgactcaac 23548730  T
Q  144 ctagtaacaactt 156  Q
    |||||||||||||    
T  23548731 ctagtaacaactt 23548743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 24090723 - 24090611
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    |||||||||  | |||||| |||| |||||| |||| ||||||||| ||||| ||||| ||||||||||||||||||||||||| || ||||||||||||    
T  24090723 ttgttttatcttggaggcgacgtgattgatattctgccttgcacaactttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 24090624  T
Q  144 ctagtaacaactt 156  Q
    |||||||||||||    
T  24090623 ctagtaacaactt 24090611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 44 - 153
Target Start/End: Complemental strand, 2965726 - 2965618
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||| |||||||||||| |||||||||||||||| | ||||| |||||||||| |||||||||||||| || ||||||||| ||    
T  2965726 ttgttttatcctagaggcggtgtggttgatagtgtgtcttgcacaattttaggcagtgccacgaaacgttttaaagagagcgacctggtcgtgactc-ac 2965628  T
Q  144 ctagtaacaa 153  Q
    ||||||||||    
T  2965627 ctagtaacaa 2965618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 39 - 156
Target Start/End: Original strand, 43302712 - 43302830
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaa-ttttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtga 137  Q
    |||| ||||||||| || ||||||||||||||||||||||  ||||||||| |||||||||||| |||||||||||||||||||| ||||  | |||| |    
T  43302712 tgggcttgttttatcctggaggcggcgtggttgatagtctaccttgcacaatttttggacagtgccacgaaacgtcttaaagagaacgaccgggtcgtaa 43302811  T
Q  138 ctcaacctagtaacaactt 156  Q
    |||| |||| |||||||||    
T  43302812 ctcagcctaataacaactt 43302830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 65 - 156
Target Start/End: Original strand, 24673345 - 24673436
Alignment:
Q  65 gtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactt 156  Q
    |||| ||||||||| ||||||| ||||||| ||||||||||||||||| ||||| |||||||  ||||||| ||||||||||||||||||||    
T  24673345 gtgggtgatagtctatcttgcataattttgaacagtgtcacgaaacgttttaaaaagagcgatctgatcgtaactcaacctagtaacaactt 24673436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 61 - 151
Target Start/End: Original strand, 28564837 - 28564927
Alignment:
Q  61 cggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaac 151  Q
    |||||||||| ||||||||||||| |||||||||  |||||||| |||| || ||| |||||||||| |||||||||||||||||||||||    
T  28564837 cggcgtggttaatagtctgtcttgaacaattttgagcagtgtcatgaaatgttttatagagagcgacctgatcgtgactcaacctagtaac 28564927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 61 - 151
Target Start/End: Original strand, 28572460 - 28572550
Alignment:
Q  61 cggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaac 151  Q
    |||||||||| ||||||||||||| |||||||||  |||||||| |||| || ||| |||||||||| |||||||||||||||||||||||    
T  28572460 cggcgtggttaatagtctgtcttgaacaattttgagcagtgtcatgaaatgttttatagagagcgacctgatcgtgactcaacctagtaac 28572550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 7902659 - 7902561
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaa 142  Q
    ||||||||| || ||| |||||||||||||| | ||||||  ||||||||||  | ||||||||||| | ||||||||||||||||| |||||||||||    
T  7902659 ttgttttatcctagagacggcgtggttgataatatgtcttatacaattttgggtaatgtcacgaaacattttaaagagagcgacttggtcgtgactcaa 7902561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 45 - 166
Target Start/End: Complemental strand, 29220359 - 29220240
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| |||||||| ||||||||||||||||  ||||||||||||||  ||||| ||| |||||||||||  |||| |||    |||||||||||||    
T  29220359 tgttttatccttgaggcagcgtggttgatagtctaccttgcacaattttgatcagtgacacaaaacgtcttaa--agagtgacccagtcgtgactcaacc 29220262  T
Q  145 tagtaacaactttagtaaataa 166  Q
    || |||||||||  ||||||||    
T  29220261 tactaacaacttcggtaaataa 29220240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 31030623 - 31030525
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || ||| ||||||||||| ||||||  |||||| ||||| ||  |||||| ||||||||||||||||||||||| || |||||||||||||    
T  31030623 tgttttatcctggagacggcgtggttgttagtctaccttgcataatttgggt-agtgtcgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 31030525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 19430109 - 19430011
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || ||| ||||||||||| ||||||  ||||||||| || ||  |||| | ||||||||||||||||||||||| || |||||||||||||    
T  19430109 tgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 19430011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 19435611 - 19435513
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || ||| ||||||||||| ||||||  ||||||||| || ||  |||| | ||||||||||||||||||||||| || |||||||||||||    
T  19435611 tgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 19435513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 19566258 - 19566160
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || ||| ||||||||||| ||||||  ||||||||| || ||  |||| | ||||||||||||||||||||||| || |||||||||||||    
T  19566258 tgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 19566160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 19571760 - 19571662
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || ||| ||||||||||| ||||||  ||||||||| || ||  |||| | ||||||||||||||||||||||| || |||||||||||||    
T  19571760 tgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 19571662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 126
Target Start/End: Complemental strand, 19954348 - 19954287
Alignment:
Q  64 cgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcga 126  Q
    |||||||||||||||| |||| |||||||||| ||||| ||| ||||||||||||||||||||    
T  19954348 cgtggttgatagtctg-cttgtacaattttgggcagtgccacaaaacgtcttaaagagagcga 19954287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 127
Target Start/End: Complemental strand, 19949892 - 19949832
Alignment:
Q  66 tggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgac 127  Q
    |||||||||||||| ||||| ||||||||| ||||| |||||||| ||||||||||||||||    
T  19949892 tggttgatagtctg-cttgctcaattttgggcagtgccacgaaacttcttaaagagagcgac 19949832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 142
Target Start/End: Original strand, 33616727 - 33616823
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaa 142  Q
    |||||||| || ||| ||||||||||| ||||||  ||||||||| || ||  |||| | ||||||||||||||||||||||| || |||||||||||    
T  33616727 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaa 33616823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 19915155 - 19915099
Alignment:
Q  132 tcgtgactcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||||||||||||||  ||| |||||||||||| ||||| |||||||    
T  19915155 tcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatacaaatac 19915099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 32015795 - 32015700
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||  ||  |||| ||||||||||||||||||||||||| || ||||||||||    
T  32015795 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccacgaaacgtcttaaagagagcgacctggtcgtgactca 32015700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 2470046 - 2469988
Alignment:
Q  68 gttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgac 127  Q
    |||||||||||| ||||||||||||||  ||||| ||| |||||||||||||||||||||    
T  2470046 gttgatagtctg-cttgcacaattttgagcagtgccacaaaacgtcttaaagagagcgac 2469988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 143
Target Start/End: Complemental strand, 17793529 - 17793450
Alignment:
Q  64 cgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||||||| || |||| |||||||||  |||||||  ||||||||||||||||| |||| || | ||||||||||    
T  17793529 cgtggttgatagtttgacttgtacaattttgagcagtgtcgtgaaacgtcttaaagagaacgacatggttgtgactcaac 17793450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 4544271 - 4544332
Alignment:
Q  65 gtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgac 127  Q
    ||||||||||||||  ||||||||||||||  ||||| || ||||||||||||||||||||||    
T  4544271 gtggttgatagtcta-cttgcacaattttgagcagtgccatgaaacgtcttaaagagagcgac 4544332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 157
Target Start/End: Complemental strand, 5884074 - 5883982
Alignment:
Q  64 cgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaacttt 157  Q
    ||||| ||||||| | ||||| ||||||||||||| |  ||| |||||||||||| ||||| || || ||||||||||||| ||||| ||||||    
T  5884074 cgtggatgatagtatctcttgtacaattttggacactaccacaaaacgtcttaaa-agagctacctggtcgtgactcaacccagtaataacttt 5883982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 119
Target Start/End: Complemental strand, 34517321 - 34517263
Alignment:
Q  59 ggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaag 119  Q
    |||| |||||||||||||||  |||||||||||||| |||||| |||||||||||||||||    
T  34517321 ggcgtcgtggttgatagtctc-cttgcacaattttg-acagtgccacgaaacgtcttaaag 34517263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 65 - 156
Target Start/End: Complemental strand, 13149808 - 13149718
Alignment:
Q  65 gtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactt 156  Q
    |||||||||||| |  ||| | ||| |||||||| || ||| |||||||| ||| ||| |||| |||||||||||||||||| |||||||||    
T  13149808 gtggttgatagtgtaccttacgcaactttggacactgccacaaaacgtctcaaa-agaacgacatgatcgtgactcaacctaataacaactt 13149718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 68 - 129
Target Start/End: Complemental strand, 7145887 - 7145827
Alignment:
Q  68 gttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgactt 129  Q
    |||||||||||| |||||||||||||  |||||||||| ||| || |||| |||||||||||    
T  7145887 gttgatagtctg-cttgcacaattttaaacagtgtcacaaaatgtgttaacgagagcgactt 7145827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 13584386 - 13584341
Alignment:
Q  105 cgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaa 150  Q
    ||||||||||||||||||||||| || |||||| ||||||| ||||    
T  13584386 cgaaacgtcttaaagagagcgacctggtcgtgattcaacctggtaa 13584341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 43999230 - 43999334
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || ||| |||||  |||| ||||||  |||||||||||| ||  |||| | |||||||| ||||||| | |||| ||||||||||||||||    
T  43999230 tgttttatcctggagacggcgcagttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgttttaaagaaaacgacctgatcgtgactcaacc 43999328  T
Q  145 tagtaa 150  Q
     |||||    
T  43999329 cagtaa 43999334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 17955789 - 17955884
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||| ||  |||| | |||||||||||||| | |||||| || ||||||||||    
T  17955789 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaaaaaagcgacctggtcgtgactca 17955884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 144
Target Start/End: Original strand, 42157871 - 42157970
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||| |||| || |||||| ||| | ||| ||||||||||| |||| | | ||| |||||||||| || |||||| ||||||||||||    
T  42157871 ttgttttatcctggagacggcatgattgataatctat-ttgtacaattttggatagtgccgcaaaatgtcttaaagatagtgacttggtcgtgactcaac 42157969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 4175 - 4026
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||| ||||||||||||||||| || |||||||    
T  4175 tgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcgtgac 4076  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| |||||||||||| |||||||||||||    
T  4075 tcaacctagtaacaacttcggtagataatagaatttggaaatccaaatac 4026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 443939 - 444075
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||           ||||||  ||||||     
T  443939 tgggcttgttttatcct-gagacggcgtggttgatagtctgccttgcacaattttgg-cagtgccacgaaacgt-----------cgacttcgtcgtgat 444025  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||||||||||||||||  |||| |||||||    
T  444026 tcaacctagtaacaacttcggtaaataatagaatttgaaaatacaaatac 444075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 2e-48; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 19799007 - 19799156
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||  ||||||||||    
T  19799007 tgggcttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggatagtgccacgaaacgtcttaaagagagcgatctgatcgtgac 19799106  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||   || ||||||||||||  ||||||||||||    
T  19799107 tcaacctagtaacaacttcgatagataatagaatttgaaaatccaaatac 19799156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 26927716 - 26927865
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| |||||||||| | ||||||||||||||||||||||| ||||||||||||||| || || |||||||||||||||||||||||||||  |||||||    
T  26927716 tgggcttgttttattttagaggcggcgtggttgatagtctgccttgcacaattttgggcaatgccacgaaacgtcttaaagagagcgacttagtcgtgac 26927815  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| ||||||||||||| ||||||||||||    
T  26927816 tcaacctagtaacaacttcggtagataatagaatttaaaaatccaaatac 26927865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 33301179 - 33301323
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||| || |||||| ||||     
T  33301179 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagaacgacctggtcgtgattcaag 33301278  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||  || |||||||||||| |||||||||||||    
T  33301279 ctagtaacaactttgatagataatagaatttggaaatccaaatac 33301323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 47455385 - 47455529
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||| || ||||||||||||    
T  47455385 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttggacattgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 47455484  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||| |||||||||  ||  |||||||||||| |||||||||||||    
T  47455485 ctaataacaacttcggtggataatagaatttggaaatccaaatac 47455529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 10135557 - 10135408
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || ||||||||||||||||| ||||| ||||||||||||| |  |||| ||||||||||||||||||||||||| || |||||||    
T  10135557 tgggcttgttttatcctagaggcggcgtggttgattgtctgccttgcacaattttaggtagtgccacgaaacgtcttaaagagagcgacctggtcgtgac 10135458  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| ||||||||| || |||||||||||||    
T  10135457 tcaacctagtaacaacttcggtagataatagaacttggaaatccaaatac 10135408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 23192816 - 23192957
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||| |||||||||||||||||| |||| |||||||||| ||||| ||||||||||||||||||||||||| || ||||||||||||    
T  23192816 ttgttttatcctggaggaggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 23192915  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaa 185  Q
    |||||||||||||  ||| |||||||||||| |||| |||||    
T  23192916 ctagtaacaacttcggtagataatagaatttggaaaaccaaa 23192957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 16649612 - 16649755
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| |  |||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||| || ||||||||||||    
T  16649612 ttgttttatcccggaggcggcgtggttgatagtctatcttgcacaattttggacagtgccac-aaacgtcttaaagagagcgacctggtcgtgactcaac 16649710  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
     ||||||||||||  ||| |||||||||||| ||||| |||||||    
T  16649711 ttagtaacaacttcggtagataatagaatttggaaattcaaatac 16649755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 40166076 - 40165932
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||||||| |||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||| || ||||||||||||    
T  40166076 ttgttttatcctagaggcggcgttgttgttagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacatggtcgtgactcaac 40165977  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||| |||||||||| | | |||||||||||    
T  40165976 ctagtaacaacttcggtagataatagaatatggtaatccaaatac 40165932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 62 - 188
Target Start/End: Original strand, 39588384 - 39588510
Alignment:
Q  62 ggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactttagta 161  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||  ||     
T  39588384 ggcgtggtagatagtctgtcttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctgatcgtgacttaacctagtaacaatttcggtg 39588483  T
Q  162 aataatagaatttagaaatccaaatac 188  Q
     |||||| ||||| |||||||||||||    
T  39588484 gataatataatttggaaatccaaatac 39588510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 67 - 188
Target Start/End: Complemental strand, 3094187 - 3094066
Alignment:
Q  67 ggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactttagtaaataa 166  Q
    ||||||||||||| ||||||||||||||| ||||| || |||||||||||||||||||||| || |||||||||||||||||||||||||  ||| ||||    
T  3094187 ggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataa 3094088  T
Q  167 tagaatttagaaatccaaatac 188  Q
    |||||||| |||||||||||||    
T  3094087 tagaatttggaaatccaaatac 3094066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 18784548 - 18784687
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||| | ||||| ||||||| |||||||| |||||||| |||||||||||||||    
T  18784548 ttgttttattctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaatgtcttaaa-agagcgacctgatcgtgactcaac 18784646  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaa 184  Q
    |||||||||||||   || | ||||||||||||||| ||||    
T  18784647 ctagtaacaacttcgctagaaaatagaatttagaaaaccaa 18784687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 47451224 - 47451368
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    |||||||||  | ||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||||||||||||||| || ||||||||||||    
T  47451224 ttgttttatcttggaggcggcgtggttgatagtctgtcttgcacaatttttggcagtgccatgaaacgtcttaaagagagcgacctggtcgtgactcaac 47451323  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||| || ||  ||  |||||||||||| |||||||||||||    
T  47451324 ctagtaataatttcggtggataatagaatttggaaatccaaatac 47451368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 42 - 161
Target Start/End: Complemental strand, 12260094 - 12259975
Alignment:
Q  42 gtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    ||||||||||| ||  || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||| ||||    
T  12260094 gtttgttttatcctaaagacggcgtggttgatagtctgtcttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacatggtcgtgtctca 12259995  T
Q  142 acctagtaacaactttagta 161  Q
    ||| ||||||||||| ||||    
T  12259994 accaagtaacaacttcagta 12259975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 44 - 157
Target Start/End: Complemental strand, 16035704 - 16035591
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||||||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||||| ||||| || ||||||||||||    
T  16035704 ttgttttatcctggaggcggcgtggttgataatctgtcttgcacaactttggacagtgccacgaaacgtgttaaagagggcgacctggtcgtgactcaac 16035605  T
Q  144 ctagtaacaacttt 157  Q
    ||||||||||||||    
T  16035604 ctagtaacaacttt 16035591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 51041457 - 51041604
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| |||||||||  | ||||||||||||||||||||||| |||||||||||| || ||||| |||||||||||||||| |||||||| || |||||||    
T  51041457 tgggcttgttttatcttggaggcggcgtggttgatagtctgccttgcacaatttggg-cagtgccacgaaacgtcttaaa-agagcgacctggtcgtgac 51041554  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||| ||||||||||||  ||| |||||||||||| |||||||||||||    
T  51041555 tcaacttagtaacaacttcggtagataatagaatttggaaatccaaatac 51041604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 82 - 188
Target Start/End: Complemental strand, 25855229 - 25855123
Alignment:
Q  82 ttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactttagtaaataatagaatttagaaatc 181  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||  ||| |||||||||||| ||||||    
T  25855229 ttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatc 25855130  T
Q  182 caaatac 188  Q
    |||||||    
T  25855129 caaatac 25855123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 10140190 - 10140041
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || |||| |||||||||||| ||||| ||||||||||||||   |||| |||||||||| |||||||||||||| ||||||||||    
T  10140190 tgggcttgttttatcctagaggtggcgtggttgattgtctgccttgcacaattttgagtagtgccacgaaacgtgttaaagagagcgacctgatcgtgac 10140091  T
Q  139 tcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||  ||| ||||||||  ||  ||||||||||||    
T  10140090 tcaacctagtaacaacttcggtagataatagatcttgaaaatccaaatac 10140041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 38620788 - 38620645
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    |||||||||  | |||||||||| |||||||||||| |||||||||||||||||| || ||||||||||||||||||||| ||  || ||| ||||||||    
T  38620788 ttgttttatcttggaggcggcgtagttgatagtctgccttgcacaattttggacaatg-cacgaaacgtcttaaagagagtgatctggtcgcgactcaac 38620690  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||| ||| |||||  ||| |||||| ||||| |||||||||||||    
T  38620689 ctaataataacttcggtagataataaaatttggaaatccaaatac 38620645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 8900350 - 8900238
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||| ||| |||||||| ||| |||||||| ||| ||||||||||| |||||| |||||||||||||  || ||||||||||||    
T  8900350 ttgttttatcctggaggcggtgtgattgatagtatgttttgcacaactttagacagtgtcacaaaacgttttaaagagagcgatatggtcgtgactcaac 8900251  T
Q  144 ctagtaacaactt 156  Q
    |||||||||||||    
T  8900250 ctagtaacaactt 8900238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 96 - 188
Target Start/End: Complemental strand, 16832145 - 16832053
Alignment:
Q  96 acagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||| |||||||||||||||||||| || |||||||||||  |||||||||||| |||| |||||||||||| |||||||||||||    
T  16832145 acagtgtcacggaacgtcttaaagagagcgacctggtcgtgactcaatatagtaacaacttaagtagataatagaatttggaaatccaaatac 16832053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 47 - 156
Target Start/End: Complemental strand, 11806452 - 11806343
Alignment:
Q  47 ttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaaccta 146  Q
    |||||||||  |||||||||||||||||||||| |||| || | ||||  |||||||||||||| |||||||||||||||  || | |||||||||||||    
T  11806452 ttttattctgaaggcggcgtggttgatagtctgccttgtaccactttgcgcagtgtcacgaaacatcttaaagagagcgatctggttgtgactcaaccta 11806353  T
Q  147 gtaacaactt 156  Q
     |||||||||    
T  11806352 ataacaactt 11806343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 57 - 151
Target Start/End: Complemental strand, 5346746 - 5346652
Alignment:
Q  57 gaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaac 151  Q
    ||||||||||| |||||||||||| ||| |||| ||||||||||| ||| |||||| ||||||||| |||| |||| || |||||||||||||||    
T  5346746 gaggcggcgtgattgatagtctgtattgtacaaatttggacagtgccacaaaacgttttaaagagaacgacctgattgtaactcaacctagtaac 5346652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 12906235 - 12906168
Alignment:
Q  59 ggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgac 127  Q
    |||| |||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||    
T  12906235 ggcgtcgtggttgatagtctg-cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgac 12906168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 2493817 - 2493899
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgac 127  Q
    ||||||||| || | |||| ||||||||||||| || ||||||||||||||| ||||| |||||||||||||||||||||||||    
T  2493817 ttgttttatcctgggggcgccgtggttgatagtttg-cttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgac 2493899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 33380940 - 33381002
Alignment:
Q  64 cgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgac 127  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||    
T  33380940 cgtggttgatagtctg-cttgcacaattttgagcagtgtcacgaaacgtcttaaagagagcgac 33381002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 27761858 - 27761916
Alignment:
Q  64 cgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagag 123  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||    
T  27761858 cgtggttgatagtctg-cttgcacaattttggacagtgccacgaaacgttttaaagagag 27761916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 10106199 - 10106100
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||| ||||||||||| ||||||  ||||||||| || ||  |||| | ||||||||||||||||||||||| || ||||||||||||    
T  10106199 ttgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaac 10106101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 25843820 - 25843764
Alignment:
Q  132 tcgtgactcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||||||||||||||  ||| |||||||||||| |||||||||||||    
T  25843820 tcgtgactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatac 25843764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 24159822 - 24159880
Alignment:
Q  68 gttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgac 127  Q
    |||||||||||| ||||||||||||||| |||| | ||||||||||||||||||||||||    
T  24159822 gttgatagtctg-cttgcacaattttgggcagtattacgaaacgtcttaaagagagcgac 24159880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 152
Target Start/End: Original strand, 28434573 - 28434680
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||| ||||  ||||||||||||||  ||||||| |||| ||||||||| ||||||||||||| |||| | | || | || |||||||    
T  28434573 ttgttttatcctggagacggcaaggttgatagtctgtggtgcacaagtttg-acagtgtcatgaaacgtcttaaaaagagtggcatgcttgtaactcaac 28434671  T
Q  144 ctagtaaca 152  Q
    |||||||||    
T  28434672 ctagtaaca 28434680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 34318224 - 34318319
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||  ||  |||| | |||||||||||||||||||||||||| ||||||||||    
T  34318224 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacttggtcgtgactca 34318319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 31064032 - 31063970
Alignment:
Q  64 cgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgac 127  Q
    ||||||||||||| || |||| ||||||||||| |||| |||||||| ||||||||||||||||    
T  31064032 cgtggttgatagtttg-cttgaacaattttggaaagtgccacgaaacctcttaaagagagcgac 31063970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 38734370 - 38734272
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || ||| ||||||||||| ||||||  ||||||||| |  ||  |||| | ||||||||||||||||||||||| || |||||||||||||    
T  38734370 tgttttatcctggagacggcgtggttgttagtctaccttgcacaactagggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 38734272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 4632962 - 4633031
Alignment:
Q  81 cttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaa 150  Q
    ||||||||| || ||| |||| | | ||||||||||||||||||||| |  |||||||||||||||||||    
T  4632962 cttgcacaaattcggatagtgccgcaaaacgtcttaaagagagcgacatagtcgtgactcaacctagtaa 4633031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 19422937 - 19422982
Alignment:
Q  105 cgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaa 150  Q
    ||||||||||||||||||||||  |||||||||||||||| |||||    
T  19422937 cgaaacgtcttaaagagagcgatctgatcgtgactcaacccagtaa 19422982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 144
Target Start/End: Original strand, 27461723 - 27461800
Alignment:
Q  67 ggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||||| || |||||| ||||||  ||||| ||||||||| | ||||||||| |||| || |||||||||||||    
T  27461723 ggttgatagtatgccttgcataattttaaacagtatcacgaaacttattaaagagaacgacatggtcgtgactcaacc 27461800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 5725074 - 5724979
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||| ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  5725074 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 5724979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 36684715 - 36684810
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||  ||  |||| | ||||||||||||||||||||||| || ||||||||||    
T  36684715 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 36684810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 36724789 - 36724722
Alignment:
Q  59 ggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgac 127  Q
    |||| |||||||||| ||||| |||||||||||||||  |||| ||  |||||||||||||||||||||    
T  36724789 ggcgtcgtggttgattgtctg-cttgcacaattttgggtagtgccataaaacgtcttaaagagagcgac 36724722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 13890908 - 13890810
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || ||| ||| ||||||| ||||||  ||||||||| || ||  |||| | | ||||||||||||||||||||| || |||||||||||||    
T  13890908 tgttttatcctggagacggtgtggttgttagtctaccttgcacaacttgggt-agtgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacc 13890810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 39747165 - 39747263
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || ||| || |||||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||||||| || || |||||||||||||    
T  39747165 tgttttatcctggagacgacgtggttgctagtctaccttgcacaacttgggt-agtgccgcgaaacgtcttaaagagagcaacctggtcgtgactcaacc 39747263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 11251113 - 11251208
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  11251113 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 11251208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 124
Target Start/End: Original strand, 17135243 - 17135287
Alignment:
Q  80 tcttgcacaattttggacagtgtcacgaaacgtcttaaagagagc 124  Q
    |||||||| ||||| |||||||||||||||| | |||||||||||    
T  17135243 tcttgcactattttagacagtgtcacgaaacattttaaagagagc 17135287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 23193237 - 23193304
Alignment:
Q  59 ggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgac 127  Q
    |||| |||||||||||||||| |||||| ||||||||   ||| || ||||||||||| ||||||||||    
T  23193237 ggcgtcgtggttgatagtctg-cttgcataattttgggttgtgccatgaaacgtcttatagagagcgac 23193304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 25661844 - 25661899
Alignment:
Q  66 tggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagaga 122  Q
    |||||||||||||  |||||||||||||||  |||| ||| ||||||||||||||||    
T  25661844 tggttgatagtcta-cttgcacaattttgggtagtgccacaaaacgtcttaaagaga 25661899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 37404416 - 37404511
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  37404416 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 37404511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 97; Significance: 7e-48; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 36 - 188
Target Start/End: Complemental strand, 4930337 - 4930185
Alignment:
Q  36 agttgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgt 135  Q
    ||||||| ||||||||| || |||||||||||||||||||| || ||| ||||||||||| ||||| ||||||||||||||||||||||||| || ||||    
T  4930337 agttgggcttgttttatcctggaggcggcgtggttgatagtatgacttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgt 4930238  T
Q  136 gactcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||||||||||  ||| |||||||||||| |||||||||||||    
T  4930237 gactcaacctagtaacaacttcggtagataatagaatttggaaatccaaatac 4930185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 26341295 - 26341151
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  26341295 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtcgtgactcaac 26341196  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||| |||||||| ||| |||||||||||||    
T  26341195 ctagtaacaacttcggtagataatagattttggaaatccaaatac 26341151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 44 - 185
Target Start/End: Complemental strand, 8076146 - 8076005
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||| || ||||||||||||    
T  8076146 ttgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 8076047  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaa 185  Q
    | ||||||||||| |||| |||||||||||| |||| |||||    
T  8076046 ccagtaacaacttcagtagataatagaatttggaaaaccaaa 8076005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 9650966 - 9651107
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| || ||||||||||||    
T  9650966 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 9651065  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaa 185  Q
    |||||||||||||  ||| | || ||||||| |||| |||||    
T  9651066 ctagtaacaacttcggtagaaaacagaatttggaaaaccaaa 9651107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 44423136 - 44423281
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||||||| |||||||||||| |||| |||||||||| ||||| ||||||||||||||||||||||||  |||||||||||||||    
T  44423136 ttgttttatcctggaggcggcgtagttgatagtctgccttgaacaattttggtcagtgccacgaaacgtcttaaagagagcgatctgatcgtgactcaac 44423235  T
Q  144 ctagtaacaactttagtaaataatagaattt-agaaatccaaatac 188  Q
    |||||||||||||| ||| ||||||||||||  |||||||||||||    
T  44423236 ctagtaacaactttggtagataatagaatttgggaaatccaaatac 44423281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 44510676 - 44510817
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |  || ||||||||||||    
T  44510676 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggacagtgccacaaaacgtcttaaagagagcaatctggtcgtgactcaac 44510775  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaa 185  Q
    |||||||||||||  ||| |||||||||||| ||||| ||||    
T  44510776 ctagtaacaacttcggtagataatagaatttggaaatacaaa 44510817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 4579604 - 4579492
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||| || ||||||||||||    
T  4579604 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 4579505  T
Q  144 ctagtaacaactt 156  Q
    |||||||||||||    
T  4579504 ctagtaacaactt 4579492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 8268389 - 8268245
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    |||||||||  | |||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| || |||||||||||     
T  8268389 ttgttttatcatggaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaat 8268290  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
     ||||||||||||  ||| |||||||||||| ||||| |||||||    
T  8268289 atagtaacaacttcggtagataatagaatttggaaatgcaaatac 8268245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 23246932 - 23247044
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||||||| ||||| |||||||| |||||||||||||||| || |||||||||||     
T  23246932 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctggtcgtgactcaat 23247031  T
Q  144 ctagtaacaactt 156  Q
    |||||||||||||    
T  23247032 ctagtaacaactt 23247044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 44 - 143
Target Start/End: Complemental strand, 23866164 - 23866065
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| || ||||||||||||    
T  23866164 ttgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaac 23866065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 13314235 - 13314379
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||| ||||| |||||||||  ||||||||||||||| ||||  ||||||||||||||||||||||||  || ||||||||||||    
T  13314235 ttgttttatcctggaggcgacgtggctgatagtctaccttgcacaattttgggcagtaccacgaaacgtcttaaagagagcgatctggtcgtgactcaac 13314334  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||   ||| ||| |||||||| |||||||||||||    
T  13314335 ctagtaacaactacggtagatagtagaatttggaaatccaaatac 13314379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 188
Target Start/End: Complemental strand, 27238324 - 27238193
Alignment:
Q  58 aggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaacttt 157  Q
    |||||||||| ||||||||||| ||| ||||||||||  ||||| ||| ||||||||||||||||||||| || |||||||||||||||||||||||||     
T  27238324 aggcggcgtgattgatagtctgccttacacaattttgagcagtgccacaaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaacttc 27238225  T
Q  158 agtaaataatagaattt-agaaatccaaatac 188  Q
      || |||||||| ||| | ||||||||||||    
T  27238224 catagataatagagtttgaaaaatccaaatac 27238193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 57 - 156
Target Start/End: Complemental strand, 29151017 - 29150918
Alignment:
Q  57 gaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactt 156  Q
    |||||| ||||||||||||| || ||||||||||||||  |||||||||||||||||||||| |||||||  || |||||||||||||||||||||||||    
T  29151017 gaggcgacgtggttgatagtttgccttgcacaattttgagcagtgtcacgaaacgtcttaaaaagagcgatctggtcgtgactcaacctagtaacaactt 29150918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 62 - 188
Target Start/End: Original strand, 42627214 - 42627341
Alignment:
Q  62 ggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacct-agtaacaactttagt 160  Q
    ||||||||||||||||||  ||||||||||||||   ||| ||||||||||||||||||||||||| || |||||| ||||||| |||||||||||  ||    
T  42627214 ggcgtggttgatagtctgctttgcacaattttgggttgtgccacgaaacgtcttaaagagagcgacctggtcgtgaatcaacctaagtaacaacttcggt 42627313  T
Q  161 aaataatagaatttagaaatccaaatac 188  Q
    | |||||||||||| ||||| |||||||    
T  42627314 agataatagaatttggaaattcaaatac 42627341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 25543361 - 25543473
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||  |||||||||||| | |||||||||||||| | ||||  ||||||||||||||||||| ||||| |||| ||||||||||    
T  25543361 ttgttttatcctggaggcgatgtggttgatagtttatcttgcacaattttaggcagtaccacgaaacgtcttaaagagtgcgacctgattgtgactcaac 25543460  T
Q  144 ctagtaacaactt 156  Q
    |||||||||||||    
T  25543461 ctagtaacaactt 25543473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 61 - 156
Target Start/End: Original strand, 3357648 - 3357743
Alignment:
Q  61 cggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactt 156  Q
    ||||||||||||||||||| ||||||||| ||||| | ||  | ||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  3357648 cggcgtggttgatagtctgccttgcacaactttgggctgtaccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacctagtaacaactt 3357743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 68 - 156
Target Start/End: Complemental strand, 16372469 - 16372382
Alignment:
Q  68 gttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactt 156  Q
    |||||||||||||||||||| || ||||  |||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  16372469 gttgatagtctgtcttgcacgatcttggt-agtgccacgaaacatcttaaagagagcgacttggtcgtgactcaacctagtaacaactt 16372382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 47 - 188
Target Start/End: Complemental strand, 3880091 - 3879948
Alignment:
Q  47 ttttattcttgaggcggcgtggttgatagtctgtcttgcacaa-ttttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactc-aacc 144  Q
    |||||| || ||||||||||||||||||||||  ||| ||||| ||||| |||||||||| |||||||||||||| || ||| |||||||||||| ||||    
T  3880091 ttttatcctggaggcggcgtggttgatagtcttccttacacaaattttgaacagtgtcacaaaacgtcttaaagaaagtgacctgatcgtgactcaaacc 3879992  T
Q  145 tagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||| ||  ||  | |||||||||| |||||| ||||||    
T  3879991 tagtaacaaattcggtggaaaatagaatttggaaatcaaaatac 3879948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 44 - 157
Target Start/End: Complemental strand, 9008259 - 9008146
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||  | || ||||||| ||| ||||||||||||||   |||||||| ||||||||||||||||| ||| || ||||||||||||    
T  9008259 ttgttttatcctggaggcttcatgattgatagcctgccttgcacaattttgagtagtgtcactaaacgtcttaaagagagggacatggtcgtgactcaac 9008160  T
Q  144 ctagtaacaacttt 157  Q
    ||||||||||||||    
T  9008159 ctagtaacaacttt 9008146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 36 - 156
Target Start/End: Original strand, 10388358 - 10388476
Alignment:
Q  36 agttgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgt 135  Q
    ||||| ||||||||||| || |||||||||| |||||| |||| || ||||||| || || || || ||| ||||||||||||||||||||| || ||||    
T  10388358 agttgagtttgttttatcctggaggcggcgttgttgat-gtctatcatgcacaacttggg-caatgccacaaaacgtcttaaagagagcgacctggtcgt 10388455  T
Q  136 gactcaacctagtaacaactt 156  Q
    |||||||||||||||||||||    
T  10388456 gactcaacctagtaacaactt 10388476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 12254175 - 12254063
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| ||  |||||||||| ||||||||||| ||||||||| ||| | ||||| ||| |||| |||||||||||||||| || ||| ||||||||    
T  12254175 ttgttttatcctgtaggcggcgtgattgatagtctgccttgcacaactttaggcagtgccacaaaacatcttaaagagagcgacctggtcgcgactcaac 12254076  T
Q  144 ctagtaacaactt 156  Q
    || ||||||||||    
T  12254075 ctggtaacaactt 12254063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 57 - 138
Target Start/End: Complemental strand, 15642317 - 15642236
Alignment:
Q  57 gaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||||| ||| ||||||||| |||||| |||||||||||| ||||||| ||||||||||||| |||||||| ||||||||||    
T  15642317 gaggcgacgtagttgatagtttgtcttccacaattttggatagtgtcatgaaacgtcttaaaaagagcgacctgatcgtgac 15642236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 72 - 188
Target Start/End: Complemental strand, 30256922 - 30256806
Alignment:
Q  72 atagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactttagtaaataatagaa 171  Q
    ||||||||  |||||||||||||| ||||| ||||||| |||||||| | |||||  || |||||||||||||| |||| |||||  ||| |||||||||    
T  30256922 atagtctgctttgcacaattttgggcagtgccacgaaatgtcttaaaaacagcgatctggtcgtgactcaaccttgtaaaaacttcggtagataatagaa 30256823  T
Q  172 tttagaaatccaaatac 188  Q
    |||  ||||||||||||    
T  30256822 tttgcaaatccaaatac 30256806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 6590982 - 6591054
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtctta 116  Q
    ||||||||| ||  |||||||||||||||||||||| ||||||||||||| ||||||| ||| ||||||||||    
T  6590982 ttgttttatcctgaaggcggcgtggttgatagtctgccttgcacaattttagacagtgccacaaaacgtctta 6591054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 21671291 - 21671179
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    |||||||||||| || |||  || |||||| ||||| ||||||||| ||||| ||||| ||| |||| |||||||||||| | | |  ||||||||||||    
T  21671291 ttgttttattctggatgcgaagttgttgattgtctgccttgcacaactttgggcagtgccactaaacttcttaaagagagggtcctagtcgtgactcaac 21671192  T
Q  144 ctagtaacaactt 156  Q
    |||||||||||||    
T  21671191 ctagtaacaactt 21671179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 68 - 156
Target Start/End: Original strand, 26287181 - 26287269
Alignment:
Q  68 gttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactt 156  Q
    |||||||||||| ||| |||||||||||||| || ||  |||| ||||||||| |||| | || |||||||||||||||||||||||||    
T  26287181 gttgatagtctgccttacacaattttggacaatgccaaaaaacatcttaaagaaagcggcatggtcgtgactcaacctagtaacaactt 26287269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 66 - 129
Target Start/End: Original strand, 29478176 - 29478238
Alignment:
Q  66 tggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgactt 129  Q
    ||||||||||||||| |||||||||||||| ||||| ||||||||||||| |||||||||||||    
T  29478176 tggttgatagtctgt-ttgcacaattttgggcagtgccacgaaacgtcttgaagagagcgactt 29478238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 3284802 - 3284740
Alignment:
Q  65 gtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgac 127  Q
    ||||||||||||||||||||||||| |||| |||||  |||||||| ||||||||||||||||    
T  3284802 gtggttgatagtctgtcttgcacaagtttgaacagtagcacgaaacatcttaaagagagcgac 3284740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 6898376 - 6898436
Alignment:
Q  65 gtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcga 126  Q
    ||||||||||||||| ||||||||||||||||||||| ||| |||| |||||||||||||||    
T  6898376 gtggttgatagtctg-cttgcacaattttggacagtgccacaaaacatcttaaagagagcga 6898436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 9973558 - 9973459
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||| ||||||||||| | ||||  ||||||||| || ||| |||| | |||||||||||||||| |||||| || ||||||||||||    
T  9973558 ttgttttatcctggagacggcgtggttgttcgtctaccttgcacaactt-ggatagtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaac 9973460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 1289353 - 1289414
Alignment:
Q  65 gtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgac 127  Q
    ||||||||||||||| |||||| |||||||   |||||||| |||||||||||||||||||||    
T  1289353 gtggttgatagtctg-cttgcataattttgagtagtgtcacaaaacgtcttaaagagagcgac 1289414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 33238097 - 33238002
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||  ||  |||| | ||||||||||||||||||||||| || ||||||||||    
T  33238097 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 33238002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 156
Target Start/End: Original strand, 45748662 - 45748754
Alignment:
Q  64 cgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactt 156  Q
    |||||||||| || || ||||||||||||| ||||||||||| ||| || |||||||  || || ||||||| | |||| |||| ||||||||    
T  45748662 cgtggttgattgtttggcttgcacaattttagacagtgtcacaaaaggttttaaagaatgcaacctgatcgtaattcaatctaggaacaactt 45748754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 47999070 - 47998975
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||  ||  |||| | ||||||||||||||||||||||| || ||||||||||    
T  47999070 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 47998975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 24528449 - 24528351
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || ||| ||||||||||| ||||||  ||||||||| || ||  | || | | ||||||||||||||||||||| || |||||||||||||    
T  24528449 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtaa-tgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacc 24528351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 12799488 - 12799454
Alignment:
Q  62 ggcgtggttgatagtctgtcttgcacaattttgga 96  Q
    |||||||||||||||||| ||||||||||||||||    
T  12799488 ggcgtggttgatagtctgccttgcacaattttgga 12799454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 145
Target Start/End: Complemental strand, 14782886 - 14782823
Alignment:
Q  80 tcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacct 145  Q
    ||||||||||||||||| ||||| |||||| |||||||  |||||||  | |||||||||||||||    
T  14782886 tcttgcacaattttggatagtgttacgaaatgtcttaa--agagcgatctaatcgtgactcaacct 14782823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 145
Target Start/End: Complemental strand, 15232915 - 15232852
Alignment:
Q  80 tcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacct 145  Q
    ||||||||||||||||| ||||| |||||| |||||||  |||||||  | |||||||||||||||    
T  15232915 tcttgcacaattttggatagtgttacgaaatgtcttaa--agagcgatctaatcgtgactcaacct 15232852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 13142900 - 13142973
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaa 117  Q
    ||||||||| || | |||||||| ||||| |||||||| ||||||| ||||   |||| |||||||||||||||    
T  13142900 ttgttttatcctggtggcggcgttgttgaaagtctgtcatgcacaactttgactagtgccacgaaacgtcttaa 13142973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 2234630 - 2234725
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||| ||  |||| | |||||||||||||||| ||| || || ||||||||||    
T  2234630 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcaacctggtcgtgactca 2234725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 16539412 - 16539507
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  16539412 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 16539507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 16626250 - 16626155
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  16626250 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 16626155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 22857746 - 22857782
Alignment:
Q  105 cgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||||||||||| |||||| |||||||||||||    
T  22857746 cgaaacgtcttaaagaaagcgacctgatcgtgactca 22857782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 144
Target Start/End: Original strand, 28292506 - 28292600
Alignment:
Q  48 tttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    ||||| || ||| ||||||||||| ||||||  |||||||||  ||||| |||| | |||||||||||||| |||||||| || |||||||| ||||    
T  28292506 tttatcctggagacggcgtggttgttagtctaccttgcacaa-cttggatagtgccgcgaaacgtcttaaa-agagcgacctggtcgtgacttaacc 28292600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 32212654 - 32212749
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| | ||| ||||| ||||||  |||||||||||| ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  32212654 tgttttatcctggagacagcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 32212749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 33243274 - 33243179
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||  ||  |||| | ||||||||||||||||||| ||| || ||||||||||    
T  33243274 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagtgacctggtcgtgactca 33243179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 42572040 - 42571945
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  42572040 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 42571945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 47993895 - 47993800
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||  ||  |||| | ||||||||||||||||||||||| || | ||||||||    
T  47993895 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggttgtgactca 47993800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 7e-48; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 8747878 - 8747734
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||||||| |||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| || ||||||||||||    
T  8747878 ttgttttatcctggaggcggcgttgttgatagcctgtcttgcacaattttgggcagtgtcacggaacgtcttaaagagagcgacctggtcgtgactcaac 8747779  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||| | || |||||||||||| |||||||||||||    
T  8747778 ctagtaacaacttcaatagataatagaatttggaaatccaaatac 8747734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 36 - 189
Target Start/End: Original strand, 2700097 - 2700250
Alignment:
Q  36 agttgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgt 135  Q
    ||||||| ||||||||| || || ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||  || ||||    
T  2700097 agttgggcttgttttatcctggaagcggcgtggttgatagtctgtcttgcacaattttgaacagtgccacgaaacgtcttaaagagagcgatctggtcgt 2700196  T
Q  136 gactcaacctagtaacaactttagtaaataatagaatttagaaatccaaatact 189  Q
    |||||||||||||||||||||  ||| ||| ||||||||  |||||||||||||    
T  2700197 gactcaacctagtaacaacttcggtagatagtagaatttgaaaatccaaatact 2700250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 6407859 - 6408003
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||||||||||||||||||||  ||| |||||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  6407859 ttgttttatcctggaggcggcgtggttgatagtctgctttgtacaattttgggcagtgccacgaaacgtcttcaagagagcgacctgatcgtgactcaac 6407958  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||| |||||||||||| |||||||||||||    
T  6407959 ctagtaacaacttcggtagataatagaatttggaaatccaaatac 6408003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 44 - 188
Target Start/End: Original strand, 11570748 - 11570892
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||| ||||| ||||||||||||||| ||||| ||||||||||||||||||||||||| || | ||||||||||    
T  11570748 ttgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggttgtgactcaac 11570847  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||| |||||||||||| |||||||||||||    
T  11570848 ctagtaacaacttcggtagataatagaatttcgaaatccaaatac 11570892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 12689067 - 12688923
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||| ||||||||||||||||||| ||||||||||||||| |||| |||| ||||||||||||||||| ||| || || |||||||||    
T  12689067 ttgttttatcctggagacggcgtggttgatagtctgccttgcacaattttgggcagtatcacaaaacgtcttaaagagagtgacctggtcatgactcaac 12688968  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||  ||  |||||||||||| |||||||||||||    
T  12688967 ctagtaacaacttcggtggataatagaatttggaaatccaaatac 12688923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 19674385 - 19674265
Alignment:
Q  68 gttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactttagtaaataat 167  Q
    |||||||||||||||||||||||||||| ||||| || |||||||||||||||||| ||| || |||||||||||||||||||||||||  |||||||||    
T  19674385 gttgatagtctgtcttgcacaattttgggcagtgccatgaaacgtcttaaagagagtgacctggtcgtgactcaacctagtaacaacttcggtaaataat 19674286  T
Q  168 agaatttagaaatccaaatac 188  Q
    |||||||  ||||||||||||    
T  19674285 agaatttgaaaatccaaatac 19674265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 44 - 188
Target Start/End: Complemental strand, 21309127 - 21308983
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||||||||||||||||||||  |||||||||||||| ||||| || |||||||||||||||||||||  || | ||||||||||    
T  21309127 ttgttttatcctggaggcggcgtggttgatagtctgcattgcacaattttgggcagtgccatgaaacgtcttaaagagagcgatatggtagtgactcaac 21309028  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||   || |||||||||||| |||||||||||||    
T  21309027 ctagtaacaacttcgatagataatagaatttggaaatccaaatac 21308983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 24589163 - 24589275
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||  |||||||||||||||    
T  24589163 ttgttttatcctggagacggcgtggttgatagtctatcttgcacaattttggaaagtgtcacgaaacgttttaaagagagcgatctgatcgtgactcaac 24589262  T
Q  144 ctagtaacaactt 156  Q
     ||||||||||||    
T  24589263 ttagtaacaactt 24589275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 36 - 188
Target Start/End: Original strand, 33687594 - 33687746
Alignment:
Q  36 agttgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgt 135  Q
    ||||| ||||||||||| || ||| |||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| || | ||    
T  33687594 agttgagtttgttttatcctggagacggcatggttgatagtctgtcttgcacaattttggccagtgccacgaaacgtcttaaagagagcgacctggtggt 33687693  T
Q  136 gactcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
     |||||||||| |||||| ||  ||| |||| | |||||| ||||||||||||    
T  33687694 aactcaacctaataacaatttcggtagataacaaaatttaaaaatccaaatac 33687746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 44 - 157
Target Start/End: Original strand, 20748283 - 20748396
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    |||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||  || ||||| | |||||||| ||||| || ||||||||||||    
T  20748283 ttgttttattctggaggcggcgtggttgatagtcggccttgcacaattttggacagtaccatgaaacatgttaaagagggcgacctggtcgtgactcaac 20748382  T
Q  144 ctagtaacaacttt 157  Q
    ||||||||||||||    
T  20748383 ctagtaacaacttt 20748396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 29892260 - 29892372
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||| || |||||||||||| |||||||||||||||||| ||||| ||| |||| |||||||||||||||| ||| |||||||||||    
T  29892260 ttgttttatcctggaggaggtgtggttgatagtttgtcttgcacaattttgggcagtgccaccaaacttcttaaagagagcgacctgaccgtgactcaac 29892359  T
Q  144 ctagtaacaactt 156  Q
    |||||||||||||    
T  29892360 ctagtaacaactt 29892372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 60 - 174
Target Start/End: Complemental strand, 14509064 - 14508950
Alignment:
Q  60 gcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactttag 159  Q
    ||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||| ||||||||||| ||||| | | ||| |||| |||||||||| |    
T  14509064 gcggcgtggttgataatctgtcttgcacaattttgaacagtgacacgaaacgtcttgaagagagcgacatgatcataaatcatcctaataacaactttgg 14508965  T
Q  160 taaataatagaattt 174  Q
    || ||||||||||||    
T  14508964 tagataatagaattt 14508950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 11534734 - 11534821
Alignment:
Q  101 gtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||||||| |||| |||||||||||| |||||||||||||    
T  11534734 gtcacgaaacgtcttaaagagagcgacctggtcttgactcaacctagtaacaacttcagtagataatagaatttcgaaatccaaatac 11534821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 101 - 188
Target Start/End: Original strand, 11560244 - 11560331
Alignment:
Q  101 gtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    ||||||||||||||||||||||||||| || || |||||||||||||||||||||| |||| |||||||||||| |||||||||||||    
T  11560244 gtcacgaaacgtcttaaagagagcgacctggtcttgactcaacctagtaacaacttcagtagataatagaatttcgaaatccaaatac 11560331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 11614091 - 11614203
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||||||  ||||| ||  |||||| ||||||||| | || | |||||||||||||    
T  11614091 ttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagcagtgccataaaacgttttaaagagaacaacctcatcgtgactcaac 11614190  T
Q  144 ctagtaacaactt 156  Q
    |||||||||||||    
T  11614191 ctagtaacaactt 11614203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 76 - 188
Target Start/End: Complemental strand, 11428108 - 11427995
Alignment:
Q  76 tctgtcttgcacaa-ttttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactttagtaaataatagaattt 174  Q
    |||| ||||||||| |||||| ||||| ||||||||||||||||||||||||| || ||||||||||| ||| |||||||||  |||||||||| |||||    
T  11428108 tctgccttgcacaacttttgggcagtgccacgaaacgtcttaaagagagcgacctggtcgtgactcaatctaataacaacttcggtaaataataaaattt 11428009  T
Q  175 agaaatccaaatac 188  Q
      ||||||||||||    
T  11428008 gaaaatccaaatac 11427995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 17964553 - 17964634
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaaga 120  Q
    |||| ||||||||| || ||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||    
T  17964553 tgggcttgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaaga 17964634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 16836150 - 16836231
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaaga 120  Q
    |||| ||||||||| || ||||||||||||||||||||||| |||| |||||||||| ||||| ||||||||||||||||||    
T  16836150 tgggcttgttttatcctggaggcggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaaga 16836231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 156
Target Start/End: Original strand, 12406366 - 12406464
Alignment:
Q  58 aggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactt 156  Q
    |||||||||| ||||||||||  ||||||||| ||| | || || ||||||||||||| ||||||||||| || ||||||||||| |||||||||||||    
T  12406366 aggcggcgtgattgatagtcttccttgcacaactttaggcactgccacgaaacgtctttaagagagcgacctggtcgtgactcaatctagtaacaactt 12406464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 154
Target Start/End: Original strand, 22695270 - 22695380
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    |||||||||  | ||||||| ||| ||||| || |||||||||||||||||  || ||||||||||||| ||||||||||| || | |||||| ||||||    
T  22695270 ttgttttatcgtggaggcggtgtgattgattgtatgtcttgcacaattttgagcaatgtcacgaaacgtgttaaagagagcaacataatcgtgtctcaac 22695369  T
Q  144 ctagtaacaac 154  Q
    |||||||||||    
T  22695370 ctagtaacaac 22695380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 44 - 165
Target Start/End: Original strand, 13736677 - 13736798
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || ||||| | ||||||| ||||||  ||||||||||||| | ||||| ||||||||||| ||||||||| ||| || | | ||||||||    
T  13736677 ttgttttatcctggaggcagtgtggttggtagtcttccttgcacaattttaggcagtgccacgaaacgtcgtaaagagagggacctggtggcgactcaac 13736776  T
Q  144 ctagtaacaactttagtaaata 165  Q
    |||||||||||||  |||||||    
T  13736777 ctagtaacaacttcggtaaata 13736798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 25316580 - 25316693
Alignment:
Q  59 ggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaacttta 158  Q
    |||||||||||| ||||| ||  |||||||||||||| ||||| ||| ||||||||||||  ||||||| || ||| ||||||| |||||||||| ||      
T  25316580 ggcggcgtggttcatagtttgctttgcacaattttgggcagtgccacaaaacgtcttaaattgagcgacctggtcgcgactcaatctagtaacaatttcg 25316679  T
Q  159 gtaaataatagaat 172  Q
    ||| ||||||||||    
T  25316680 gtagataatagaat 25316693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 172
Target Start/End: Original strand, 26204074 - 26204187
Alignment:
Q  59 ggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaacttta 158  Q
    |||||||||||| ||||| ||  |||||||||||||| ||||| ||| ||||||||||||  ||||||| || ||| ||||||| |||||||||| ||      
T  26204074 ggcggcgtggttcatagtttgctttgcacaattttgggcagtgccacaaaacgtcttaaattgagcgacctggtcgcgactcaatctagtaacaatttcg 26204173  T
Q  159 gtaaataatagaat 172  Q
    ||| ||||||||||    
T  26204174 gtagataatagaat 26204187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 35129704 - 35129642
Alignment:
Q  64 cgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgac 127  Q
    |||||||||||||||| ||||||||||||||| ||||| || ||||||||||||||||||||||    
T  35129704 cgtggttgatagtctg-cttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgac 35129642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 12183000 - 12183100
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    ||||||||||| |||||| || ||||| ||||||   ||||||||  ||||  |||| | ||||||||||||||||||||||| || |||||||||||||    
T  12183000 tgttttattctggaggcgacgcggttgttagtctacattgcacaaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 12183099  T
Q  145 t 145  Q
    |    
T  12183100 t 12183100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 2863518 - 2863568
Alignment:
Q  111 gtcttaaagagagcgacttgatcgtgactcaacctagtaacaactttagta 161  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||| ||||    
T  2863518 gtcttaaagagagcgacatgatagtgactcaacctagtaacaacttcagta 2863568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 2882821 - 2882874
Alignment:
Q  111 gtcttaaagagagcgacttgatcgtgactcaacctagtaacaactttagtaaat 164  Q
    ||||||||||||||||  || ||||||||||||||||||||||||| |||||||    
T  2882821 gtcttaaagagagcgatatggtcgtgactcaacctagtaacaacttcagtaaat 2882874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 3902006 - 3901909
Alignment:
Q  47 ttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||| || ||||||||| ||||| || |||  |||||||||  ||||| |||| | | ||||||||||||||||||||| || |||||||||||||    
T  3902006 ttttatcctggaggcggcgcggttggtattctaccttgcacaaacttggatagtgccgcaaaacgtcttaaagagagcgacctggtcgtgactcaacc 3901909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 32815082 - 32815138
Alignment:
Q  64 cgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagag 121  Q
    |||||||||||||||| ||||||||||||||| ||||| | |||||||||||||||||    
T  32815082 cgtggttgatagtctg-cttgcacaattttgggcagtgccgcgaaacgtcttaaagag 32815138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 32551539 - 32551598
Alignment:
Q  65 gtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcg 125  Q
    ||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||| ||||||    
T  32551539 gtggttgatagtctg-cttgcacaattttgaacagtttcacgaaacgtattaaaaagagcg 32551598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 144
Target Start/End: Complemental strand, 10642793 - 10642706
Alignment:
Q  57 gaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    ||||||||| ||||| ||||||  |||||||||  | ||| |||| |||||||||||||||||| |||||| |  |||||||||||||    
T  10642793 gaggcggcgcggttgttagtctaccttgcacaacctcggatagtgccacgaaacgtcttaaagaaagcgacattgtcgtgactcaacc 10642706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 144
Target Start/End: Complemental strand, 19478227 - 19478145
Alignment:
Q  61 cggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    ||||||||||| ||||||  ||||||||| || ||  |||| | ||||||||||||||||||||||| || |||||||||||||    
T  19478227 cggcgtggttgttagtctaccttgcacaacttgggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactcaacc 19478145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 12851886 - 12851809
Alignment:
Q  66 tggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||||| || ||||||||||||||| ||||| | |||||| |||||   |||||| |||| ||||||||||||    
T  12851886 tggttgatagtttgccttgcacaattttgggcagtggcgcgaaacatcttatgaagagcgtcttggtcgtgactcaac 12851809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 144
Target Start/End: Complemental strand, 29325569 - 29325532
Alignment:
Q  107 aaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||||||| |||||||||||||||||||||||||    
T  29325569 aaacgtcttaaaaagagcgacttgatcgtgactcaacc 29325532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 127
Target Start/End: Complemental strand, 14041749 - 14041705
Alignment:
Q  83 tgcacaattttggacagtgtcacgaaacgtcttaaagagagcgac 127  Q
    ||||||||||| | |||||||||||||||| ||||||||||||||    
T  14041749 tgcacaattttaggcagtgtcacgaaacgttttaaagagagcgac 14041705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 22698243 - 22698338
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||  ||  |||| | ||||||||||||||||||||||| || ||||||||||    
T  22698243 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 22698338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 29491237 - 29491332
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||| ||||||||| ||||||||||    
T  29491237 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacttggtcgtgactca 29491332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 31981655 - 31981560
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||| ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  31981655 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 31981560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 5601025 - 5601072
Alignment:
Q  98 agtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacct 145  Q
    |||||| |||||||||||||||| |||||| || ||||||||||||||    
T  5601025 agtgtcgcgaaacgtcttaaagaaagcgacctggtcgtgactcaacct 5601072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 13605092 - 13605190
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || ||| ||||||||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||||||| || |  |||||||||||||    
T  13605092 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgccgcgaaacgtcttaaagagagcaacctagtcgtgactcaacc 13605190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 157
Target Start/End: Complemental strand, 17729136 - 17729090
Alignment:
Q  111 gtcttaaagagagcgacttgatcgtgactcaacctagtaacaacttt 157  Q
    |||||||||||||||||   |||||| ||||||||||||||||||||    
T  17729136 gtcttaaagagagcgacaatatcgtgtctcaacctagtaacaacttt 17729090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 34142175 - 34142080
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  ||||||||| || ||  || | |||||||||||||||||| |||||| || ||||||||||    
T  34142175 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttgggt-agagccacgaaacgtcttaaagaaagcgacctggtcgtgactca 34142080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 34154791 - 34154696
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  ||||||||| || ||  || | |||||||||||||||||| |||||| || ||||||||||    
T  34154791 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttgggt-agagccacgaaacgtcttaaagaaagcgacctggtcgtgactca 34154696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 34375955 - 34375919
Alignment:
Q  105 cgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||||||||||| |||||| |||||||||||||    
T  34375955 cgaaacgtcttaaagaaagcgacctgatcgtgactca 34375919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 36 - 188
Target Start/End: Complemental strand, 25503 - 25351
Alignment:
Q  36 agttgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgt 135  Q
    ||||||| ||||||||| || || ||||||||||||||||||||||||||||||||||   |||||||||| |||||||||||||||| ||| | || ||    
T  25503 agttgggcttgttttatcctggacgcggcgtggttgatagtctgtcttgcacaattttacgcagtgtcacgtaacgtcttaaagagagtgacctaattgt 25404  T
Q  136 gactcaacctagtaacaactttagtaaataatagaatttagaaatccaaatac 188  Q
    |||||||||||||||||||||   || |||||||||||| |||||||||||||    
T  25403 gactcaacctagtaacaacttcgatagataatagaatttggaaatccaaatac 25351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 44 - 185
Target Start/End: Complemental strand, 83162 - 83021
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||||| |||||||||||||| |||||| ||||||||   ||||||||||||||||||||||||||||| || ||||||||||||    
T  83162 ttgttttatcctggaggcggcatggttgatagtctgccttgcataattttgggtggtgtcacgaaacgtcttaaagagagcgacctggtcgtgactcaac 83063  T
Q  144 ctagtaacaactttagtaaataatagaatttagaaatccaaa 185  Q
    |||||||||||||  ||| | || ||||||| |||| |||||    
T  83062 ctagtaacaacttcggtagaaaacagaatttggaaaaccaaa 83021  T

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Target: scaffold0012 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 39 - 149
Target Start/End: Original strand, 166080 - 166190
Alignment:
Q  39 tgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgac 138  Q
    |||| ||||||||| || |||||||||||||||||||| |||||||||||||||| | ||||| ||||||||||||||||||||||||| || | |||||    
T  166080 tgggcttgttttatcctggaggcggcgtggttgatagtatgtcttgcacaatttttggcagtgccacgaaacgtcttaaagagagcgacctggttgtgac 166179  T
Q  139 tcaacctagta 149  Q
    |||||||||||    
T  166180 tcaacctagta 166190  T

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Target: scaffold0184 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 42 - 156
Target Start/End: Complemental strand, 2406 - 2293
Alignment:
Q  42 gtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    ||||||||||| || |||||||||||||||||| ||||||||||||||||||  ||| || ||| |||||| ||||||||| |||| ||||| |||||||    
T  2406 gtttgttttatactagaggcggcgtggttgata-tctgtcttgcacaattttaaacaatggcacaaaacgtattaaagagaacgacctgatcatgactca 2308  T
Q  142 acctagtaacaactt 156  Q
    ||||| |||||||||    
T  2307 acctaataacaactt 2293  T

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Target: scaffold2020 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold2020
Description:

Target: scaffold2020; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 467 - 361
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||| ||||||||||||| |||||||||||| |||||||| || || ||||||||||||| | |||||| |  ||||||||||||    
T  467 ttgttttatcctggaggcgacgtggttgatagtgtgtcttgcacaactttggacaatgccatgaaacgtcttaaaaaaagcgacatagtcgtgactcaac 368  T
Q  144 ctagtaa 150  Q
    |||||||    
T  367 ctagtaa 361  T

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Target: scaffold0009 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 165028 - 165134
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||| ||||||||||||| |||||||||||| |||||||| || || ||||||||||||| | |||||| |  ||||||||||||    
T  165028 ttgttttatcctggaggcgacgtggttgatagtgtgtcttgcacaactttggacaatgccatgaaacgtcttaaaaaaagcgacatagtcgtgactcaac 165127  T
Q  144 ctagtaa 150  Q
    |||||||    
T  165128 ctagtaa 165134  T

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Target: scaffold0240 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 36 - 156
Target Start/End: Complemental strand, 4095 - 3975
Alignment:
Q  36 agttgggtttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgt 135  Q
    ||||||| ||||||||| || ||||||||||||||||| || ||||||||| || ||| | || || ||  ||| ||||||||||||||||  || ||||    
T  4095 agttgggcttgttttatcctggaggcggcgtggttgatggtatgtcttgcaaaaattttggcattgccataaaaagtcttaaagagagcgatatggtcgt 3996  T
Q  136 gactcaacctagtaacaactt 156  Q
    |||||||||||||||||||||    
T  3995 gactcaacctagtaacaactt 3975  T

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Target: scaffold0008 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 44 - 153
Target Start/End: Complemental strand, 255913 - 255804
Alignment:
Q  44 ttgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaac 143  Q
    ||||||||| || |||||||| | ||||||||| ||||||||||||||||||  |||| |||||||| |||||||||||| ||| || ||||| || |||    
T  255913 ttgttttatcctggaggcggcatagttgatagtatgtcttgcacaattttgggtagtgccacgaaacctcttaaagagagtgacctggtcgtgtcttaac 255814  T
Q  144 ctagtaacaa 153  Q
     |||||||||    
T  255813 atagtaacaa 255804  T

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Target: scaffold0128 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 147
Target Start/End: Complemental strand, 13346 - 13265
Alignment:
Q  66 tggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctag 147  Q
    |||||||||||||  |||| |||||||||| ||||||||| |||||||||||||| || |||||||||| ||||| ||||||    
T  13346 tggttgatagtctaccttgaacaattttgggcagtgtcaccaaacgtcttaaagaaagtgacttgatcgggactccacctag 13265  T

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Target: scaffold0132 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 2772 - 2870
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || ||| ||||||||||| ||||||  ||||||||| || ||  |||||||||||||||||||||||| ||||| || |||||||||||||    
T  2772 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgtcacgaaacgtcttaaagagcgcgacctggtcgtgactcaacc 2870  T

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Target: scaffold0132; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 10732 - 10830
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || ||| ||||||||||| ||||||  ||||||||| || ||  |||||||||||||||||||||||| ||||| || |||||||||||||    
T  10732 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgtcacgaaacgtcttaaagagcgcgacctggtcgtgactcaacc 10830  T

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Target: scaffold0097 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 15355 - 15268
Alignment:
Q  69 ttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacctagtaacaactt 156  Q
    ||||||||||||||||||||||||||  |||||  ||||||| |||||||  ||| ||  || |||||||||||||||||||||||||    
T  15355 ttgatagtctgtcttgcacaattttgagcagtgctacgaaacatcttaaaaggagtgatatggtcgtgactcaacctagtaacaactt 15268  T

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Target: scaffold0018 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 171734 - 171796
Alignment:
Q  64 cgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgac 127  Q
    |||||||||||||||| ||||||||||||| | ||||| |||||||||||||||||||||||||    
T  171734 cgtggttgatagtctg-cttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgac 171796  T

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Target: scaffold0014 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 26468 - 26373
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||  ||  |||| | ||||||||||||||||||||||||||||||| |||||    
T  26468 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacttgatcgtaactca 26373  T

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Target: scaffold0014; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 31640 - 31545
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  31640 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 31545  T

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Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 1660 - 1562
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || ||| ||||||||||| ||||||  ||||||||| || ||  |||| | ||||||||||||||||||||||| || |||||||| ||||    
T  1660 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgacttaacc 1562  T

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Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 45 - 144
Target Start/End: Complemental strand, 7141 - 7043
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || ||| ||||||||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||||| |||| || |||| ||||||||    
T  7141 tgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggt-agtgccgcgaaacgtcttaaagagaacgacctggtcgtaactcaacc 7043  T

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Target: scaffold0060 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 150
Target Start/End: Complemental strand, 37105 - 37001
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||| ||  |||| | |||||||||||||||| |||||| || |||||||||| ||    
T  37105 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactcaccc 37007  T
Q  145 tagtaa 150  Q
     |||||    
T  37006 cagtaa 37001  T

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Target: scaffold0055 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 3153 - 3058
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||  ||  |||| | ||||||||||||||||||||||| || ||||||||||    
T  3153 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 3058  T

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Target: scaffold0052 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 81382 - 81477
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  |||||||||||  ||  |||| | ||||||||||||||||||||||| || ||||||||||    
T  81382 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattcaggt-agtgccgcgaaacgtcttaaagagagcgacctggtcgtgactca 81477  T

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Target: scaffold0067 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 34028 - 34067
Alignment:
Q  105 cgaaacgtcttaaagagagcgacttgatcgtgactcaacc 144  Q
    ||||||||||||||||||||||| || |||||||||||||    
T  34028 cgaaacgtcttaaagagagcgacctggtcgtgactcaacc 34067  T

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Target: scaffold0594 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 9208 - 9303
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  9208 tgttttatcctggagacggcgcggttgctagtcttccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 9303  T

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Target: scaffold0166 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 13740 - 13835
Alignment:
Q  45 tgttttattcttgaggcggcgtggttgatagtctgtcttgcacaattttggacagtgtcacgaaacgtcttaaagagagcgacttgatcgtgactca 141  Q
    |||||||| || ||| ||||| ||||| ||||||  ||||||||| || ||  |||| | |||||||||||||||| |||||| || ||||||||||    
T  13740 tgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggt-agtgccgcgaaacgtcttaaagaaagcgacctggtcgtgactca 13835  T

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