View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8804_high_3 (Length: 395)
Name: NF8804_high_3
Description: NF8804
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8804_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 355; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 18 - 388
Target Start/End: Original strand, 46848069 - 46848439
Alignment:
| Q |
18 |
atgatgtgtctaaatggttcaatagaataaacaaactcttttcttgccttctccaaatcataacaaggtagctcccacattgtttcttcataagaagaag |
117 |
Q |
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| T |
46848069 |
atgatgtgtctaaatggttcaatagaataaaaaaactcttttcttgccttctccaaatcataacaaggtagctcccacattgtttcttcataagaagaag |
46848168 |
T |
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| Q |
118 |
atgaataagaaaaagagtgtttaccaacttttgtcttttcacccacaagaggcataggatcaaaccaaaatgactcttttttgaacaaatttgaatcata |
217 |
Q |
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| T |
46848169 |
atgaataagaaaaagagtgtttaccaacttttgtcttttcacccacaagaggcataggatcaaaccaaaatgactcttttttggacaaatttgaatcata |
46848268 |
T |
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| Q |
218 |
agtttcacaagtatcaacatcataaattaatatgttcagtggaatccatgattccaaagctttacgactactttcattcatatattcaagaacatattct |
317 |
Q |
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| T |
46848269 |
agtttcacaagtatcaacatcataaattaatatgttcagtggaatccatgattccaaagctttacgactactttcattcatatattcaagaacatattct |
46848368 |
T |
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| Q |
318 |
tcaaaatccttagaaggtgagattttgaggctatcccaacacatacaatccgttgtaagcttgagtataat |
388 |
Q |
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| T |
46848369 |
tcaaaatccttagaaggtgagattttgaggctatcccaacacatacaatccgttgcaagcttgattataat |
46848439 |
T |
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