View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8806_high_5 (Length: 332)

Name: NF8806_high_5
Description: NF8806
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8806_high_5
NF8806_high_5
[»] chr7 (44 HSPs)
chr7 (13-289)||(47245941-47246218)
chr7 (40-167)||(18824091-18824217)
chr7 (40-167)||(11000648-11000774)
chr7 (40-149)||(10902668-10902775)
chr7 (40-170)||(44565991-44566119)
chr7 (40-167)||(16825354-16825479)
chr7 (40-167)||(35488189-35488314)
chr7 (40-167)||(41684022-41684147)
chr7 (40-170)||(40212835-40212963)
chr7 (40-166)||(41632365-41632489)
chr7 (43-170)||(45440856-45440982)
chr7 (40-163)||(38528713-38528832)
chr7 (40-164)||(6656476-6656596)
chr7 (40-117)||(9947038-9947115)
chr7 (40-105)||(45448888-45448953)
chr7 (74-165)||(6656226-6656315)
chr7 (40-108)||(8419646-8419714)
chr7 (40-167)||(11329939-11330064)
chr7 (40-167)||(25098015-25098140)
chr7 (40-167)||(27213855-27213980)
chr7 (40-108)||(27248239-27248307)
chr7 (40-167)||(28904186-28904311)
chr7 (40-167)||(45045572-45045697)
chr7 (40-112)||(45723095-45723167)
chr7 (40-166)||(30685993-30686117)
chr7 (40-141)||(5543157-5543256)
chr7 (40-117)||(25045665-25045742)
chr7 (40-117)||(27419272-27419349)
chr7 (40-117)||(38396414-38396491)
chr7 (40-168)||(38544140-38544266)
chr7 (52-167)||(39554141-39554254)
chr7 (40-166)||(45265049-45265173)
chr7 (69-167)||(48160591-48160687)
chr7 (40-98)||(9814281-9814339)
chr7 (40-117)||(25924685-25924762)
chr7 (55-167)||(33378803-33378913)
chr7 (40-166)||(34930466-34930592)
chr7 (40-117)||(48341309-48341385)
chr7 (40-167)||(48314068-48314193)
chr7 (52-166)||(43949203-43949315)
chr7 (52-165)||(44820212-44820323)
chr7 (52-160)||(43445890-43445996)
chr7 (69-115)||(40385677-40385723)
chr7 (135-167)||(6204472-6204504)
[»] scaffold0702 (1 HSPs)
scaffold0702 (40-167)||(3565-3690)
[»] scaffold0662 (1 HSPs)
scaffold0662 (40-167)||(4414-4539)
[»] chr2 (51 HSPs)
chr2 (40-163)||(14832756-14832877)
chr2 (52-167)||(6571645-6571758)
chr2 (50-164)||(18713660-18713772)
chr2 (40-168)||(1988257-1988383)
chr2 (40-163)||(28311701-28311822)
chr2 (40-172)||(27357958-27358088)
chr2 (40-167)||(11071551-11071676)
chr2 (51-165)||(24499399-24499509)
chr2 (40-167)||(25454970-25455095)
chr2 (40-167)||(37533898-37534023)
chr2 (40-167)||(45694134-45694259)
chr2 (40-166)||(41750475-41750599)
chr2 (70-167)||(4875751-4875846)
chr2 (40-149)||(14253468-14253575)
chr2 (43-163)||(638542-638660)
chr2 (40-167)||(5770110-5770235)
chr2 (40-108)||(17965929-17965997)
chr2 (40-167)||(20426483-20426608)
chr2 (40-167)||(34356700-34356825)
chr2 (40-163)||(37233375-37233496)
chr2 (40-117)||(3902402-3902479)
chr2 (40-117)||(6171737-6171814)
chr2 (43-167)||(40950859-40950981)
chr2 (40-167)||(346345-346470)
chr2 (52-167)||(14403233-14403346)
chr2 (40-108)||(14777555-14777623)
chr2 (40-165)||(37192468-37192591)
chr2 (40-101)||(2050812-2050873)
chr2 (43-167)||(9733846-9733968)
chr2 (55-167)||(21737400-21737510)
chr2 (40-108)||(2521621-2521689)
chr2 (40-108)||(4559505-4559573)
chr2 (40-167)||(5002837-5002961)
chr2 (40-167)||(40569966-40570091)
chr2 (40-108)||(42674718-42674786)
chr2 (40-107)||(41729188-41729255)
chr2 (40-117)||(25625332-25625409)
chr2 (40-172)||(45409196-45409326)
chr2 (52-167)||(1623341-1623453)
chr2 (53-105)||(13539627-13539679)
chr2 (40-96)||(23944109-23944165)
chr2 (43-166)||(41297919-41298040)
chr2 (69-167)||(39995131-39995227)
chr2 (67-117)||(11763419-11763469)
chr2 (121-167)||(14137207-14137253)
chr2 (70-166)||(4685155-4685249)
chr2 (40-167)||(37851805-37851929)
chr2 (60-163)||(39819662-39819763)
chr2 (68-165)||(1723230-1723325)
chr2 (72-167)||(7007551-7007644)
chr2 (40-117)||(26310213-26310292)
[»] chr6 (13 HSPs)
chr6 (40-167)||(6705765-6705890)
chr6 (40-164)||(345833-345956)
chr6 (40-117)||(16968871-16968948)
chr6 (40-167)||(7344083-7344208)
chr6 (40-170)||(1316964-1317092)
chr6 (40-167)||(2657646-2657771)
chr6 (55-167)||(7053570-7053680)
chr6 (40-117)||(14170959-14171036)
chr6 (40-100)||(14781685-14781745)
chr6 (80-172)||(8029319-8029409)
chr6 (40-117)||(18897867-18897944)
chr6 (40-149)||(21008042-21008149)
chr6 (225-265)||(29252612-29252652)
[»] chr1 (56 HSPs)
chr1 (40-167)||(5518504-5518629)
chr1 (40-167)||(13521268-13521392)
chr1 (52-167)||(19083105-19083218)
chr1 (52-167)||(19130993-19131106)
chr1 (43-166)||(20504990-20505111)
chr1 (40-167)||(52630720-52630845)
chr1 (40-167)||(29091613-29091738)
chr1 (53-165)||(38519064-38519174)
chr1 (40-172)||(20260081-20260211)
chr1 (40-117)||(36361729-36361806)
chr1 (40-167)||(12190177-12190302)
chr1 (52-166)||(13931885-13931997)
chr1 (40-161)||(30240957-30241075)
chr1 (40-172)||(4683369-4683499)
chr1 (40-117)||(48916070-48916147)
chr1 (40-167)||(1007694-1007819)
chr1 (40-167)||(1597342-1597467)
chr1 (40-167)||(2430443-2430568)
chr1 (40-108)||(39329555-39329623)
chr1 (40-167)||(47037404-47037529)
chr1 (69-164)||(52186049-52186142)
chr1 (40-167)||(52699466-52699591)
chr1 (40-165)||(9831872-9831995)
chr1 (43-117)||(17475369-17475443)
chr1 (40-172)||(1227874-1228003)
chr1 (40-117)||(13653798-13653875)
chr1 (40-117)||(14788670-14788747)
chr1 (40-167)||(3572565-3572690)
chr1 (40-167)||(8331961-8332086)
chr1 (40-167)||(9115784-9115909)
chr1 (45-168)||(16257007-16257128)
chr1 (40-167)||(39930404-39930529)
chr1 (40-108)||(46666655-46666723)
chr1 (40-166)||(25789710-25789834)
chr1 (40-107)||(46960574-46960641)
chr1 (40-165)||(32824869-32824992)
chr1 (40-117)||(2632799-2632876)
chr1 (57-161)||(9011167-9011268)
chr1 (40-160)||(11014448-11014566)
chr1 (52-152)||(13440354-13440452)
chr1 (40-117)||(35187403-35187480)
chr1 (55-167)||(6911455-6911565)
chr1 (40-108)||(50190822-50190890)
chr1 (73-167)||(49822917-49823009)
chr1 (40-128)||(51445119-51445204)
chr1 (69-167)||(6978746-6978842)
chr1 (40-95)||(37336514-37336569)
chr1 (52-109)||(24116391-24116448)
chr1 (40-117)||(38964727-38964804)
chr1 (53-117)||(37436669-37436733)
chr1 (67-164)||(31806759-31806852)
chr1 (69-166)||(37261823-37261918)
chr1 (56-117)||(3939503-3939564)
chr1 (40-96)||(5806356-5806412)
chr1 (52-167)||(19094072-19094185)
chr1 (70-114)||(37727001-37727045)
[»] scaffold0238 (1 HSPs)
scaffold0238 (43-166)||(23297-23418)
[»] chr5 (35 HSPs)
chr5 (40-167)||(42012179-42012304)
chr5 (53-166)||(15200547-15200658)
chr5 (40-168)||(36703820-36703946)
chr5 (40-167)||(40275754-40275880)
chr5 (40-167)||(18412155-18412280)
chr5 (56-167)||(27481319-27481428)
chr5 (40-167)||(29543015-29543140)
chr5 (40-173)||(12970524-12970655)
chr5 (53-174)||(43346888-43347007)
chr5 (40-149)||(27480955-27481062)
chr5 (40-149)||(31583081-31583187)
chr5 (40-165)||(32535883-32536006)
chr5 (40-128)||(6091661-6091747)
chr5 (40-117)||(8646439-8646516)
chr5 (69-165)||(26637045-26637139)
chr5 (69-149)||(28429676-28429754)
chr5 (52-167)||(555706-555819)
chr5 (40-167)||(4765560-4765685)
chr5 (40-167)||(14206821-14206946)
chr5 (40-167)||(19065505-19065630)
chr5 (40-108)||(22935969-22936037)
chr5 (69-172)||(36978166-36978267)
chr5 (40-166)||(3913201-3913323)
chr5 (40-170)||(20962536-20962664)
chr5 (40-117)||(11855703-11855780)
chr5 (40-111)||(6930586-6930657)
chr5 (52-117)||(17251770-17251835)
chr5 (40-112)||(35348579-35348650)
chr5 (40-161)||(28023779-28023898)
chr5 (53-108)||(28602515-28602569)
chr5 (40-161)||(8406840-8406959)
chr5 (40-166)||(19089718-19089842)
chr5 (53-100)||(41783685-41783732)
chr5 (52-122)||(1664688-1664758)
chr5 (56-117)||(16720260-16720321)
[»] chr4 (53 HSPs)
chr4 (40-171)||(34049593-34049722)
chr4 (56-162)||(10400810-10400914)
chr4 (40-167)||(6279921-6280046)
chr4 (40-167)||(25932391-25932516)
chr4 (40-167)||(30415852-30415977)
chr4 (40-167)||(45747796-45747921)
chr4 (40-166)||(47670312-47670436)
chr4 (40-117)||(13230037-13230114)
chr4 (40-117)||(32953473-32953550)
chr4 (40-117)||(39730341-39730418)
chr4 (40-117)||(48518939-48519016)
chr4 (40-117)||(50672953-50673030)
chr4 (40-167)||(35999636-35999761)
chr4 (40-167)||(39498775-39498900)
chr4 (40-167)||(39502114-39502239)
chr4 (40-167)||(41859047-41859172)
chr4 (52-167)||(42773910-42774023)
chr4 (40-167)||(45596218-45596343)
chr4 (57-167)||(27555377-27555485)
chr4 (40-170)||(27762896-27763024)
chr4 (40-169)||(18405703-18405830)
chr4 (40-165)||(18931703-18931826)
chr4 (40-117)||(8322195-8322272)
chr4 (40-167)||(40435850-40435975)
chr4 (40-167)||(43723214-43723339)
chr4 (40-167)||(48879275-48879400)
chr4 (40-108)||(55968057-55968125)
chr4 (50-117)||(12275959-12276026)
chr4 (80-166)||(36860108-36860191)
chr4 (40-113)||(34238006-34238079)
chr4 (40-112)||(936076-936148)
chr4 (56-167)||(23686753-23686862)
chr4 (43-166)||(31937870-31937991)
chr4 (40-167)||(39835307-39835432)
chr4 (40-167)||(51968727-51968852)
chr4 (43-118)||(18405281-18405356)
chr4 (40-165)||(41744222-41744346)
chr4 (67-167)||(9327245-9327344)
chr4 (67-167)||(9374004-9374103)
chr4 (40-106)||(25916092-25916158)
chr4 (40-166)||(7258913-7259036)
chr4 (69-161)||(44309739-44309829)
chr4 (53-117)||(38414170-38414233)
chr4 (40-106)||(27942687-27942753)
chr4 (70-108)||(47426298-47426336)
chr4 (40-117)||(22654525-22654602)
chr4 (40-146)||(54478495-54478605)
chr4 (67-149)||(9382300-9382381)
chr4 (40-167)||(18094200-18094324)
chr4 (52-100)||(36858441-36858489)
chr4 (40-107)||(52469648-52469715)
chr4 (48-105)||(26165322-26165379)
chr4 (57-113)||(24805137-24805193)
[»] chr8 (34 HSPs)
chr8 (69-167)||(7317348-7317444)
chr8 (40-167)||(1554354-1554479)
chr8 (40-167)||(18726619-18726744)
chr8 (56-163)||(29421493-29421598)
chr8 (51-115)||(35394347-35394411)
chr8 (40-167)||(38132737-38132862)
chr8 (40-166)||(33444627-33444749)
chr8 (53-165)||(21137134-21137244)
chr8 (40-164)||(26601941-26602062)
chr8 (40-172)||(32660928-32661058)
chr8 (40-167)||(16313507-16313632)
chr8 (40-117)||(3049955-3050032)
chr8 (40-168)||(10896216-10896342)
chr8 (40-167)||(12710591-12710716)
chr8 (40-108)||(35818481-35818549)
chr8 (40-108)||(38364027-38364095)
chr8 (70-146)||(44161730-44161806)
chr8 (42-172)||(16218938-16219066)
chr8 (53-165)||(5020492-5020605)
chr8 (40-101)||(18298058-18298119)
chr8 (40-117)||(37392594-37392671)
chr8 (40-167)||(25837857-25837982)
chr8 (40-167)||(26062090-26062215)
chr8 (40-108)||(41228771-41228839)
chr8 (40-166)||(42755813-42755937)
chr8 (52-165)||(14763933-14764044)
chr8 (52-161)||(38437412-38437519)
chr8 (52-163)||(7931197-7931306)
chr8 (52-167)||(34672292-34672405)
chr8 (40-167)||(40197076-40197201)
chr8 (43-162)||(43871971-43872088)
chr8 (56-161)||(15226926-15227029)
chr8 (40-160)||(41432687-41432804)
chr8 (43-113)||(19160793-19160863)
[»] scaffold0006 (3 HSPs)
scaffold0006 (40-167)||(119266-119392)
scaffold0006 (40-117)||(143559-143636)
scaffold0006 (40-167)||(201871-201996)
[»] scaffold0189 (1 HSPs)
scaffold0189 (40-162)||(28957-29077)
[»] chr3 (38 HSPs)
chr3 (40-169)||(12228254-12228381)
chr3 (41-167)||(6831957-6832079)
chr3 (40-167)||(26848968-26849093)
chr3 (52-167)||(31435923-31436036)
chr3 (40-108)||(31611042-31611110)
chr3 (40-167)||(40908211-40908336)
chr3 (40-111)||(18460885-18460956)
chr3 (40-117)||(6231549-6231626)
chr3 (43-167)||(28124436-28124558)
chr3 (40-164)||(48339760-48339882)
chr3 (40-167)||(11239120-11239245)
chr3 (40-167)||(20297739-20297864)
chr3 (69-167)||(24784182-24784276)
chr3 (40-165)||(1099144-1099267)
chr3 (50-167)||(20414465-20414580)
chr3 (54-167)||(43132157-43132268)
chr3 (52-169)||(47114855-47114970)
chr3 (40-101)||(46359898-46359959)
chr3 (40-108)||(8476365-8476433)
chr3 (40-167)||(28139720-28139845)
chr3 (40-167)||(44952254-44952379)
chr3 (40-159)||(53165733-53165850)
chr3 (40-114)||(27093961-27094035)
chr3 (52-165)||(27823232-27823343)
chr3 (70-164)||(32071420-32071508)
chr3 (52-117)||(1246950-1247015)
chr3 (83-167)||(2565460-2565542)
chr3 (40-164)||(12930945-12931065)
chr3 (55-167)||(24574536-24574646)
chr3 (80-117)||(26849203-26849240)
chr3 (40-100)||(9320513-9320573)
chr3 (40-167)||(28770210-28770335)
chr3 (40-163)||(33217917-33218038)
chr3 (69-116)||(33647752-33647799)
chr3 (40-149)||(10822736-10822843)
chr3 (80-166)||(38140365-38140453)
chr3 (69-128)||(39932562-39932621)
chr3 (74-155)||(21925475-21925559)


Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-112; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 13 - 289
Target Start/End: Complemental strand, 47246218 - 47245941
Alignment:
Q  13 attctcacccttttcttttnnnnnnnnttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatt 112  Q
    |||||||||||||||||||        ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  47246218 attctcacccttttcttttaaaaaaaattcaattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagaaatatatatt 47246119  T
Q  113 tctatatcattttatttctaaaaatctacaaatataatttaaaacaaacacacccataataacattgaatatctcaaataaacatttcattcatctgc-c 211  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||| |||| |      
T  47246118 tctatatcattttatttctaagaatctacaaatataatttgaaacaaacgcacccataataacattgaatgtctcaaataaacatttcatttatctacgg 47246019  T
Q  212 gtcctacaaatatttaatattaaaaaatcaaatataatgatatagaattattaactattactccaaactactctatct 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  47246018 gtcctacaaatatttaatattaaaaaatcaaatataatgatatagagttattaactattactccaaactactctatct 47245941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 18824091 - 18824217
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| || ||||||||||||| | |||||||||| ||| |||||||||||||||||| ||||||||||| | |||||||||||| | |||||||     
T  18824091 ttctattcccaaaaacattttatacccgggaataaaatttagtgaacttgtaacaaacataggcatatatattt-tctatcattttattcccaaaaatca 18824189  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    ||||||| || || ||||||||||||||    
T  18824190 acaaatacaacttgaaacaaacacaccc 18824217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 11000648 - 11000774
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| ||||| |||||||||| | |||||||||| |||||||||||||||||||||| | ||||||| | |||||||||||||||| |  ||||     
T  11000648 ttctattcccaagaatattttatacccgggaataaaatttagtaaacttgtaacaaacataggc-tatatatatttatatcattttatttccaggaatca 11000746  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    ||| |||||| || ||||||||||||||    
T  11000747 acatatataacttgaaacaaacacaccc 11000774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 40 - 149
Target Start/End: Complemental strand, 10902775 - 10902668
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| || ||||||||||| |  | ||||||||| |||||||||||||||||||||||||| ||||||||  ||||||||||||| |||||||||    
T  10902775 ttctattcccaaaaacattttatatccaaaaataaaatttagtaaacttgtaacaaacatagacatgtatatttc--tatcattttatttttaaaaatct 10902678  T
Q  140 acaaatataa 149  Q
    || |||||||    
T  10902677 actaatataa 10902668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 170
Target Start/End: Original strand, 44565991 - 44566119
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |  ||||||||||||| | |||||||||| | ||||||||||||||||||||||||||| ||| |  ||||||||||||||   |||||     
T  44565991 ttctattcccagaaacattttatacccgggaataaaatttaataaacttgtaacaaacatagacatatacattcc--tatcattttatttccggaaatca 44566088  T
Q  140 acaaatataatttaaaacaaacacacccata 170  Q
    |||| ||||| || |||||||||||||||||    
T  44566089 acaattataacttgaaacaaacacacccata 44566119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 16825479 - 16825354
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || |||||||||||||||||||||| |||||| |||||  |||||||||||| |||  |||      
T  16825479 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattcctaggaatta 16825382  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  16825381 acaattataacttgaaacaaacacaccc 16825354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 35488314 - 35488189
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||| |||||| ||| |   ||||||||||| |   |||||     
T  35488314 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatacattcc--aatcattttattcccggaaatca 35488217  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  35488216 acaattataacttgaaacaaacacaccc 35488189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 41684147 - 41684022
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |||||||| ||||| | |  ||||||||| ||||||||||||||||||||| ||||||||||||||||  ||| |||||   |  ||||     
T  41684147 ttctattcccaagaacatcttatatccggaaataaaatttagtaaacttgtaacaaacataaacatatatatttctat--catattattctcaggaatca 41684050  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||||||||| || ||||||||||||||    
T  41684049 acaaatataacttgaaacaaacacaccc 41684022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 170
Target Start/End: Original strand, 40212835 - 40212963
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   |||||||||| |||||||||||||||||||||| |||||| ||| |  |||||||||||| |    ||||     
T  40212835 ttctattcccaggaacattttataccccggaataaaatttagtaaacttgtaacaaacataggcatatacattcc--tatcattttattcccgcgaatca 40212932  T
Q  140 acaaatataatttaaaacaaacacacccata 170  Q
    |||| ||||| || |||||||||||||||||    
T  40212933 acaattataacttgaaacaaacacacccata 40212963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 166
Target Start/End: Complemental strand, 41632489 - 41632365
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||||||||||||||||||||   ||||||| || ||||||||||||| |||||||| |||||| |||||  ||||||||||||   |  ||||     
T  41632489 ttctattcctaagaacattttataccaaggaataaattttagtaaacttgtaataaacataggcatatacatttc--tatcattttattctcaggaatca 41632392  T
Q  140 acaaatataatttaaaacaaacacacc 166  Q
    |||| ||||| || |||||||||||||    
T  41632391 acaattataacttgaaacaaacacacc 41632365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 170
Target Start/End: Original strand, 45440856 - 45440982
Alignment:
Q  43 tattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctaca 142  Q
    |||||| | |||||||||||||  | |||||||||| |||||||||||||||||||||  ||| ||| ||| | ||| |||||||| | || ||||||||    
T  45440856 tattccgaggaacattttatactcgggaataaaatttagtaaacttgtaacaaacatatgcatgtatgttt-tttatgattttattcccaagaatctaca 45440954  T
Q  143 aatataatttaaaacaaacacacccata 170  Q
    | ||||| || |||||||||||||||||    
T  45440955 attataacttgaaacaaacacacccata 45440982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 40 - 163
Target Start/End: Complemental strand, 38528832 - 38528713
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| || |||||||||||||  ||||||||||  |||||||||||||||||||||  ||||||||||    ||| |||||||||  |||||| |    
T  38528832 ttctattcccaataacattttatacccaagaataaaatctagtaaacttgtaacaaacataagcatatatatt----tatgattttattttcaaaaatat 38528737  T
Q  140 acaaatataatttaaaacaaacac 163  Q
    | |||||||| || ||||||||||    
T  38528736 ataaatataacttgaaacaaacac 38528713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 164
Target Start/End: Complemental strand, 6656596 - 6656476
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |  ||||||||||||  || |||||| || |||||||||||||||||||||| ||||||||||   |||||| |||||||| |||||||     
T  6656596 ttctattcccagaaacattttatactcgaaaataaattt-agtaaacttgtaacaaacataggcatatatatt--catatca-tttatttccaaaaatca 6656501  T
Q  140 acaaatataatttaaaacaaacaca 164  Q
    |||||||||| || |||||||||||    
T  6656500 acaaatataacttgaaacaaacaca 6656476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 9947115 - 9947038
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||| |||||| ||| ||||    
T  9947115 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatacattcctat 9947038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 105
Target Start/End: Original strand, 45448888 - 45448953
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacat 105  Q
    ||||||||| | |||||||||||||| | |||||||||| ||||||||||||||||||||||||||    
T  45448888 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatagacat 45448953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 74 - 165
Target Start/End: Complemental strand, 6656315 - 6656226
Alignment:
Q  74 aaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaacaaacacac 165  Q
    ||||| ||||||||| ||||||||||||  |||||||||   ||||||||||||||| ||||||| |||||||||| || ||||||||||||    
T  6656315 aaatttagtaaacttataacaaacataggtatatatattc--atatcattttatttccaaaaatcaacaaatataacttgaaacaaacacac 6656226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 8419714 - 8419646
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatata 108  Q
    ||||||||| | |||||||||||||||| |||||||||  |||||||||||||||||||||| ||||||    
T  8419714 ttctattcccaggaacattttatacctgggaataaaataaagtaaacttgtaacaaacataggcatata 8419646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 11329939 - 11330064
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || |||||||||||||||||||||| |||||| |||||  |||||||||||| |    ||||     
T  11329939 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattcccgggaatca 11330036  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  11330037 acaattataacttgaaacaaacacaccc 11330064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 25098015 - 25098140
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| |  ||||||||| |||||||||||||||||||| | |||||| ||| |  |||||||||||| |  ||||||     
T  25098015 ttctattcccaggaacattttatacccggaaataaaatttagtaaacttgtaacaaacatgggcatatacattcc--tatcattttattcccgaaaatca 25098112  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    | || ||||| || ||||||||||||||    
T  25098113 aaaattataacttgaaacaaacacaccc 25098140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 27213980 - 27213855
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || |||||||||||||||||||||| |||||| |||||  |||||||||||| |    ||||     
T  27213980 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattcccgggaatca 27213883  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  27213882 acaattataacttgaaacaaacacaccc 27213855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 27248239 - 27248307
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatata 108  Q
    ||||||||| |  ||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  27248239 ttctattcccagtaacattttatacctgggaataaaatttagtaaacttgtaacaaacataggcatata 27248307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 28904311 - 28904186
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |  |||||||||||||   ||||||| || ||||||||||||||||||||||||||||| |||||  ||||||||||||      ||||     
T  28904311 ttctattcccagaaacattttataccaaggaataaattttagtaaacttgtaacaaacatagacatatacatttc--tatcattttattctcgggaatca 28904214  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| |||||||||||||||||    
T  28904213 acaattataacttaaaacaaacacaccc 28904186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 45045572 - 45045697
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| |  ||||||||| | |||||||||||||||||||| |||||| ||| |  |||||||||||| |    ||||     
T  45045572 ttctattcccaggaacattttatacccggaaataaaatttaataaacttgtaacaaacataggcatatacattcc--tatcattttattcccgggaatca 45045669  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| |||||||||||||||||    
T  45045670 acaattataacttaaaacaaacacaccc 45045697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 112
Target Start/End: Original strand, 45723095 - 45723167
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatt 112  Q
    ||||||||| |||||||||||||||  | |||||||||| ||||||||||| |||||||||| ||||||||||    
T  45723095 ttctattcccaagaacattttatactcgggaataaaatttagtaaacttgtgacaaacataggcatatatatt 45723167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 166
Target Start/End: Complemental strand, 30686117 - 30685993
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||  ||| ||| ||  | ||| |||||||| | |  |||||    
T  30686117 ttctattcccatgaacattttatacccgggaataaaatttagtaaacttgtaacaaacatatgcatgtatgtt--tttatgattttattccaacgaatct 30686020  T
Q  140 acaaatataatttaaaacaaacacacc 166  Q
    |||| ||||| || |||||||||||||    
T  30686019 acaattataacttgaaacaaacacacc 30685993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 141
Target Start/End: Complemental strand, 5543256 - 5543157
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |||||  ||||||||  |||||||||||| ||||||||||||||||||||| |||| ||||||  |||||| ||||||| | || |||||    
T  5543256 ttctattcccaagaaagttttatacgagagaataaaatttagtaaacttgtaacaaacataaacatgtatatt--tatatcgttttattcccaagaatct 5543159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 25045742 - 25045665
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | |||||||||||||  | |||||||||| |||||||||||||||||||||  |||||||||| ||||    
T  25045742 ttctattcccaggaacattttatactcgggaataaaatttagtaaacttgtaacaaacatatgcatatatattcctat 25045665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 27419349 - 27419272
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | ||||||||||||||   ||||||| || |||||||||||||||||||||| |||||| ||||||||    
T  27419349 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatttctat 27419272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 38396491 - 38396414
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | |||||||||||||| | |||||||||| ||||||||| || |||||||||||||||| ||| ||||    
T  38396491 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttataccaaacatagacatatacattcctat 38396414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 168
Target Start/End: Original strand, 38544140 - 38544266
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |  ||||||||||||| | |||||||||| ||||||| ||||| |||||||| |||||| ||| |  ||||||||||||||    ||||     
T  38544140 ttctattcccagaaacattttatacccgggaataaaatttagtaaacctgtaataaacataggcatatacattcc--tatcattttatttccgggaatca 38544237  T
Q  140 acaaatataatttaaaacaaacacaccca 168  Q
    |||| ||||| || |||||||||||||||    
T  38544238 acaattataacttgaaacaaacacaccca 38544266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 39554141 - 39554254
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatt 151  Q
    ||||||||||||||   ||||||| || |||||||||||||||||||||| |||||| |||||  |||||||||||| |    |||| |||| ||||| |    
T  39554141 gaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattcccgggaatcaacaattataact 39554238  T
Q  152 taaaacaaacacaccc 167  Q
    | ||||||||||||||    
T  39554239 tgaaacaaacacaccc 39554254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 166
Target Start/End: Complemental strand, 45265173 - 45265049
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| |  ||||||||| ||||||||| |||||||||||| |||||| ||| |   ||||||||||| |  | ||||     
T  45265173 ttctattcccaggaacattttatacccggaaataaaatttagtaaacttataacaaacataggcatatacattcc--aatcattttattcccgagaatca 45265076  T
Q  140 acaaatataatttaaaacaaacacacc 166  Q
    |||| ||||| || |||||||||||||    
T  45265075 acaattataacttgaaacaaacacacc 45265049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 48160687 - 48160591
Alignment:
Q  69 gaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaacaaacacaccc 167  Q
    |||||||||| ||||||||||||||||||||||||||||| ||| |  |||||||||||| |    |||| |||| ||||| || ||||||||||||||    
T  48160687 gaataaaatttagtaaacttgtaacaaacatagacatatacattcc--tatcattttattcccgggaatcaacaattataacttgaaacaaacacaccc 48160591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 9814339 - 9814281
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaaca 98  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||    
T  9814339 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaaca 9814281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 25924762 - 25924685
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | |||||||||||||    ||||||| || |||||||||||||||||||||| |||||| ||||||||    
T  25924762 ttctattcccaggaacattttatacaaaggaataaattttagtaaacttgtaacaaacataggcatatacatttctat 25924685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 33378803 - 33378913
Alignment:
Q  55 cattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaa 154  Q
    |||||||||||   |||||||||| |||||||||||||||||||||| |||||| ||| |  |||||||||||| |    |||| |||| ||||| || |    
T  33378803 cattttatacccaggaataaaatttagtaaacttgtaacaaacataggcatatacattcc--tatcattttattcccgggaatcaacaattataacttga 33378900  T
Q  155 aacaaacacaccc 167  Q
    |||||||||||||    
T  33378901 aacaaacacaccc 33378913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 166
Target Start/End: Complemental strand, 34930592 - 34930466
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaac-aaacatagacatatatatttctatatcattttatttctaaaaatc 138  Q
    ||||||||| | ||||||||||||||   ||||||| || |||||||||||||| |||||||| |||||| |||||  |||||||||||| | |  ||||    
T  34930592 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaaacataggcatatacatttc--tatcattttattcccaggaatc 34930495  T
Q  139 tacaaatataa-tttaaaacaaacacacc 166  Q
     |||| ||||| ||| |||||||||||||    
T  34930494 aacaattataactttgaaacaaacacacc 34930466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 48341309 - 48341385
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | |||||||||||||| | |||||||||| | |||||||||||||||||||| |||||| ||| ||||    
T  48341309 ttctattcccaggaacattttataccgg-gaataaaatttaataaacttgtaacaaacataggcatatacattcctat 48341385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 48314068 - 48314193
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |  ||||||||||| | | |||||||||| ||||||||| |||||||||||| |||||| ||| |  |||||||||||| |    ||||     
T  48314068 ttctattcccagaaacattttatatccgggaataaaatttagtaaacttctaacaaacataggcatatacattcc--tatcattttattcccgggaatca 48314165  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  48314166 acaattataacttgaaacaaacacaccc 48314193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 166
Target Start/End: Original strand, 43949203 - 43949315
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatt 151  Q
    |||||||||||||    ||||||| || |||||||||||||||||||||| |||||| |||||  |||||||||||| |    |||| |||| ||||| |    
T  43949203 gaacattttatactaaggaataaattttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattcccgggaatcaacaattataact 43949300  T
Q  152 taaaacaaacacacc 166  Q
    | |||||||||||||    
T  43949301 tgaaacaaacacacc 43949315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 165
Target Start/End: Original strand, 44820212 - 44820323
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatt 151  Q
    ||||||||||||||   ||||||| || | ||||| ||||||||||| | ||| ||| ||||||||  ||||||||| || |||||| |||| ||||| |    
T  44820212 gaacattttataccaaggaataaattttaataaacatgtaacaaacacatacaaatacatttctat--cattttattcctgaaaatcaacaattataact 44820309  T
Q  152 taaaacaaacacac 165  Q
    | ||||||||||||    
T  44820310 tgaaacaaacacac 44820323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 160
Target Start/End: Complemental strand, 43445996 - 43445890
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatt 151  Q
    ||||||||||||   |||||||||||| ||||||||| ||||||| |||| |||||| |||| ||||  ||||||||   || |||||| |||||||| |    
T  43445996 gaacattttatattcgagaataaaatttagtaaacttataacaaatataggcatatacatttttata--attttattcgcaagaatctataaatataact 43445899  T
Q  152 taaaacaaa 160  Q
    | |||||||    
T  43445898 tgaaacaaa 43445890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 115
Target Start/End: Complemental strand, 40385723 - 40385677
Alignment:
Q  69 gaataaaattcagtaaacttgtaacaaacatagacatatatatttct 115  Q
    |||||||||||||||||||| |||||||||||  || ||||||||||    
T  40385723 gaataaaattcagtaaacttctaacaaacatatgcaaatatatttct 40385677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 167
Target Start/End: Original strand, 6204472 - 6204504
Alignment:
Q  135 aatctacaaatataatttaaaacaaacacaccc 167  Q
    |||||||||||||||||||||| ||||||||||    
T  6204472 aatctacaaatataatttaaaaaaaacacaccc 6204504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 3690 - 3565
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||  | |||||||||| |||||||||||||||||||||| ||||||||||| ||||  |||||||| ||| ||||||    
T  3690 ttctattcccaggaacattttatactcgggaataaaatttagtaaacttgtaacaaacataggcatatatatttttata--attttattcctagaaatct 3593  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||||||||| || ||||||||||||||    
T  3592 acaaatataacttgaaacaaacacaccc 3565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 4414 - 4539
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||  | |||||||||| |||||||||||||||||||||| ||||||||||| ||||  |||||||| ||| ||||||    
T  4414 ttctattcccaggaacattttatactcgggaataaaatttagtaaacttgtaacaaacataggcatatatatttttata--attttattcctagaaatct 4511  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||||||||| || ||||||||||||||    
T  4512 acaaatataacttgaaacaaacacaccc 4539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 6e-31; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 40 - 163
Target Start/End: Original strand, 14832756 - 14832877
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |||||||||||||||||| |||||||||| ||||||||| |||||||||||| ||||||||||||  |||||||||||| |||  ||||     
T  14832756 ttctattcccaagaacattttatacctgggaataaaatttagtaaacttttaacaaacataggcatatatatttc--tatcattttattcctaggaatca 14832853  T
Q  140 acaaatataatttaaaacaaacac 163  Q
    |||||||||| || ||||||||||    
T  14832854 acaaatataacttgaaacaaacac 14832877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 6571645 - 6571758
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatt 151  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |  ||||||||||||||   ||||| |||||||||| |    
T  6571645 gaacattttatacctgagaataaaatttagtaaacttgtaacaaacataggcatatatattcc--tatcattttatttccggaaatcaacaaatataact 6571742  T
Q  152 taaaacaaacacaccc 167  Q
    | ||||||| ||||||    
T  6571743 ttaaacaaatacaccc 6571758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 18713772 - 18713660
Alignment:
Q  50 aagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataa 149  Q
    |||||||||||||||| | |||||||||| |||||||||||||||||||||| ||||||||||  |||||||||||||| | |  |||| ||||||||||    
T  18713772 aagaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatatatt--tatatcattttattaccatgaatcaacaaatataa 18713675  T
Q  150 tttaaaacaaacaca 164  Q
     || |||||||||||    
T  18713674 cttgaaacaaacaca 18713660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 168
Target Start/End: Original strand, 1988257 - 1988383
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |||||||||||||| | |  ||||||||| | |||||||||||||||||||| ||| ||||||||  |||||||||||| | | |||||     
T  1988257 ttctattcccaagaacattttatatccggaaataaaatttaataaacttgtaacaaacataggcatgtatatttc--tatcattttattcccagaaatca 1988354  T
Q  140 acaaatataatttaaaacaaacacaccca 168  Q
    |||||||||| || |||||||||||||||    
T  1988355 acaaatataacttcaaacaaacacaccca 1988383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 40 - 163
Target Start/End: Complemental strand, 28311822 - 28311701
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||||| |  |||||||||||| |    ||||     
T  28311822 ttctattcccaggaacattttatacccgggaataaaattcagtaaacttgtaacaaacataggcatatatattcc--tatcattttattcccgggaatca 28311725  T
Q  140 acaaatataatttaaaacaaacac 163  Q
    |||||||||| || ||||||||||    
T  28311724 acaaatataacttgaaacaaacac 28311701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 172
Target Start/End: Complemental strand, 27358088 - 27357958
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| |  ||  |||||||||||  ||   ||||     
T  27358088 ttctattcccatgaatattttatacctgggaataaaatttagtaaacttgtaacaaacatagacatataca--tccctatcattttatacctgggaatca 27357991  T
Q  140 acaaatataatttaaaacaaacacacccataat 172  Q
    |||||||||| || |||||||||||||| ||||    
T  27357990 acaaatataacttgaaacaaacacacccttaat 27357958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 11071551 - 11071676
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||| |||||| ||| |  |||||||||||| |   |||||     
T  11071551 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatacattcc--tatcattttattcccggaaatca 11071648  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  11071649 acaattataacttgaaacaaacacaccc 11071676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 165
Target Start/End: Original strand, 24499399 - 24499509
Alignment:
Q  51 agaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataat 150  Q
    |||||||||||||||   |||||||||| ||||||||| ||||||||||||  |||||||||||  ||||||||||||||||  |||| ||||||||||     
T  24499399 agaacattttataccatggaataaaatttagtaaacttataacaaacatag--atatatatttc--tatcattttatttctatgaatcaacaaatataac 24499494  T
Q  151 ttaaaacaaacacac 165  Q
    || ||||||||||||    
T  24499495 ttgaaacaaacacac 24499509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 25454970 - 25455095
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||  |||||| ||||| |||||||||||||||||||||||||||| ||||  | ||| ||||||||   |  |||||    
T  25454970 ttctattcccaggaacattttatactcgagaatgaaatttagtaaacttgtaacaaacatagacatatgtatt--tttatgattttattctcaggaatct 25455067  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||||||||| || ||||||||||||||    
T  25455068 acaaatataacttgaaacaaacacaccc 25455095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 37533898 - 37534023
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   |||||||||| ||||||||||||||||||||||||||||| ||| |  |||||||||||| |   |||||     
T  37533898 ttctattccaaggaacattttatacccaggaataaaatttagtaaacttgtaacaaacatagacatatacattcc--tatcattttattcccggaaatca 37533995  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  37533996 acaattataacttgaaacaaacacaccc 37534023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 45694134 - 45694259
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||| ||||||||| | |||||||||| |||||||||||||||||||||||||| | |||| |  |||||||||||| | | ||||||    
T  45694134 ttctattcccatgaacgttttatacccgggaataaaatttagtaaacttgtaacaaacatagacatgtgtattcc--tatcattttattcccagaaatct 45694231  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    || ||||||| || |||||||| |||||    
T  45694232 acgaatataacttgaaacaaacgcaccc 45694259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 41750475 - 41750599
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || |||||||||||||||||||||| |||||| |||||  |||||||||||| |||  ||||     
T  41750475 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattcctaggaatca 41750572  T
Q  140 acaaatataatttaaaacaaacacacc 166  Q
    |||| ||||| || |||||||||||||    
T  41750573 acaattataacttgaaacaaacacacc 41750599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 4875751 - 4875846
Alignment:
Q  70 aataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaacaaacacaccc 167  Q
    ||||||||| || |||||||||||||||||| ||| || |||||||||  ||||||||||| ||||| |||||||||||| ||||||||||| |||||    
T  4875751 aataaaatttagcaaacttgtaacaaacataaacaaatttatttctat--cattttatttccaaaaagctacaaatataacttaaaacaaacgcaccc 4875846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 149
Target Start/End: Original strand, 14253468 - 14253575
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |  ||||||||||||  | |||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||| |  | ||||     
T  14253468 ttctattcccataaacattttatactcgggaataaaatttagtaaacttgtaacaaacatagacatatatatttc--tatcattttattcccgagaatca 14253565  T
Q  140 acaaatataa 149  Q
    ||||||||||    
T  14253566 acaaatataa 14253575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 163
Target Start/End: Original strand, 638542 - 638660
Alignment:
Q  43 tattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctaca 142  Q
    |||||||| |||||||||||||| |  ||||||||| ||||||| ||||||||||||||||||||| ||| |  ||||||||||||||   ||||| |||    
T  638542 tattcctaggaacattttatacccggaaataaaatttagtaaacctgtaacaaacatagacatatacattcc--tatcattttatttccggaaatcaaca 638639  T
Q  143 aatataatttaaaacaaacac 163  Q
    | ||||| || ||||||||||    
T  638640 attataacttgaaacaaacac 638660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 5770235 - 5770110
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||| |||||| ||| |  |||||||||||| | |  ||||     
T  5770235 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatacattcc--tatcattttattcccaggaatca 5770138  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||| ||||    
T  5770137 acaattataacttgaaacaaacataccc 5770110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 17965929 - 17965997
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatata 108  Q
    ||||||||||| |||||||||||||| | ||||||||||  ||||||||||||||||||||||||||||    
T  17965929 ttctattcctaggaacattttatacccgggaataaaatttggtaaacttgtaacaaacatagacatata 17965997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 20426608 - 20426483
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||| | | | |||||||| |||||||||||||||||||||| |||||| ||| |  |||||||||||| |    ||||     
T  20426608 ttctattcccaggaacattttatatccggggataaaatttagtaaacttgtaacaaacataggcatataaattcc--tatcattttattcccgggaatca 20426511  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    ||||||||||||| ||||||||||||||    
T  20426510 acaaatataatttgaaacaaacacaccc 20426483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 34356825 - 34356700
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| ||||||||| || |||||||||||||||| |||||  |||||||||||| |    ||||     
T  34356825 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttataccaaacatagacatatacatttc--tatcattttattcccgggaatca 34356728  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  34356727 acaattataacttgaaacaaacacaccc 34356700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 163
Target Start/End: Original strand, 37233375 - 37233496
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||| ||||||| || |  |||||||||||| |    ||||     
T  37233375 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatatgttcc--tatcattttattcccgggaatca 37233472  T
Q  140 acaaatataatttaaaacaaacac 163  Q
    |||||||||| || ||||||||||    
T  37233473 acaaatataacttgaaacaaacac 37233496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 3902402 - 3902479
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | |||||||||| |||||||||||||||| |||||||||||||||||||||    |||||||||||||    
T  3902402 ttctattcccaggaacattttaaacctgagaataaaatttagtaaacttgtaacaaacatatgtctatatatttctat 3902479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 6171737 - 6171814
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||| |||||| ||| ||||    
T  6171737 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatacattcctat 6171814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 167
Target Start/End: Complemental strand, 40950981 - 40950859
Alignment:
Q  43 tattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctaca 142  Q
    |||||| | ||||||||||||||   ||||||| || |||||||||||||||||||||  ||||||||||||  |||||||||||| |  | |||| |||    
T  40950981 tattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataagcatatatatttc--tatcattttattcccgagaatcaaca 40950884  T
Q  143 aatataatttaaaacaaacacaccc 167  Q
    | ||||| || ||||||||||||||    
T  40950883 attataacttgaaacaaacacaccc 40950859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 346470 - 346345
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| | |||||||||||||||||||| |||||| ||| |  |||||||||||| |    ||||     
T  346470 ttctattcccaggaacattttatacccgggaataaaatttaataaacttgtaacaaacataggcatatacattcc--tatcattttattcccgggaatca 346373  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  346372 acaattataacttgaaacaaacacaccc 346345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 14403346 - 14403233
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatt 151  Q
    ||||||||||||||||||||||||||| | ||||||||||| |||  ||| ||| ||||||  | |||||||||||||| |  |||| ||||||| || |    
T  14403346 gaacattttatacctgagaataaaatttattaaacttgtaataaatgtaggcatgtatatt--tttatcattttatttccaggaatcaacaaatacaact 14403249  T
Q  152 taaaacaaacacaccc 167  Q
    | ||||||||||||||    
T  14403248 tcaaacaaacacaccc 14403233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 14777623 - 14777555
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatata 108  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||| ||||||    
T  14777623 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatata 14777555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 165
Target Start/End: Original strand, 37192468 - 37192591
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || | ||||||||||||||||||||||||||| |||||  |||||||||||| |    ||||     
T  37192468 ttctattcccaggaacattttataccaaggaataaattttaataaacttgtaacaaacatagacatatacatttc--tatcattttattcccgggaatca 37192565  T
Q  140 acaaatataatttaaaacaaacacac 165  Q
    |||| ||||| || ||||||||||||    
T  37192566 acaattataacttgaaacaaacacac 37192591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 2050812 - 2050873
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatag 101  Q
    ||||||||| | |||||||||||||| | |||||||||| ||||||||||||||||||||||    
T  2050812 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatag 2050873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 43 - 167
Target Start/End: Complemental strand, 9733968 - 9733846
Alignment:
Q  43 tattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctaca 142  Q
    |||||| | ||||||||||||||   ||||||| || |||||||||||||||||||||| |||||| |||||  |||||||||||| |    |||| |||    
T  9733968 tattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattcccgggaatcaaca 9733871  T
Q  143 aatataatttaaaacaaacacaccc 167  Q
    | ||||| || ||||||||||||||    
T  9733870 attataacttgaaacaaacacaccc 9733846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 21737510 - 21737400
Alignment:
Q  55 cattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaa 154  Q
    |||||||||||   |||||||||| ||||||||||||||||||||||||||||| ||| |  |||||||||||| |    |||| |||| ||||| || |    
T  21737510 cattttatacccaggaataaaatttagtaaacttgtaacaaacatagacatatacattcc--tatcattttattcccgggaatcaacaattataacttga 21737413  T
Q  155 aacaaacacaccc 167  Q
    |||||||||||||    
T  21737412 aacaaacacaccc 21737400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 2521621 - 2521689
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatata 108  Q
    ||||||||| | ||||||||||||||   |||||||||| |||||||||||||||||||||| ||||||    
T  2521621 ttctattcccaggaacattttatacccaggaataaaatttagtaaacttgtaacaaacataggcatata 2521689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 4559505 - 4559573
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatata 108  Q
    ||||||||| | |||||||||||||| | |||||||||  |||||||||||||||||||||| ||||||    
T  4559505 ttctattcccaggaacattttatacccgggaataaaataaagtaaacttgtaacaaacataggcatata 4559573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 5002961 - 5002837
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |  |||||||||||| || |||||||||| || |||||||||||||| |||  ||| |||| ||||||  |||||||||  || ||||||    
T  5002961 ttctattcccagaaacattttatacttg-gaataaaatttagcaaacttgtaacaaatatatgcatgtatacttctat--cattttattcttagaaatct 5002865  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||||||||| || |||||||| |||||    
T  5002864 acaaatataacttgaaacaaacgcaccc 5002837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 40569966 - 40570091
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| |  ||||||||||||||||||| ||| ||| ||  | ||| |||||||| | |  |||||    
T  40569966 ttctattcccaggaacattttatacccgggaataaaatttaacaaacttgtaacaaacataggcatgtatgtt--tttatgattttattcccaggaatct 40570063  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  40570064 acaattataacttgaaacaaacacaccc 40570091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 42674786 - 42674718
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatata 108  Q
    ||||||||| | ||||||||||| || | |||||||||| |||||||||||||||||||||| ||||||    
T  42674786 ttctattcccaggaacattttatgcccgggaataaaatttagtaaacttgtaacaaacataggcatata 42674718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 107
Target Start/End: Complemental strand, 41729255 - 41729188
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatat 107  Q
    ||||||||| | |||||||||||| |||  ||||||||| |||||||||||||||||||||| |||||    
T  41729255 ttctattcccaggaacattttatatctggcaataaaatttagtaaacttgtaacaaacataggcatat 41729188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 25625332 - 25625409
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | ||||||||||||||| ||||||||||  |||||| ||| ||||||| |||||||  ||||||||||    
T  25625332 ttctattcccatgaacattttatacctcagaataaaatctagtaaatttgcaacaaacctagacattcatatttctat 25625409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 172
Target Start/End: Original strand, 45409196 - 45409326
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||| |||||||||| |  ||||||||| ||||||||||||| |||||||| |||||| ||| |  |||||||||||   |   ||||     
T  45409196 ttctattcccatgaatattttatacccggtaataaaatttagtaaacttgtaaaaaacataggcatatacattcc--tatcattttatacttgggaatca 45409293  T
Q  140 acaaatataatttaaaacaaacacacccataat 172  Q
    |||||||||| || |||||||||||||| ||||    
T  45409294 acaaatataacttgaaacaaacacacccttaat 45409326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 1623341 - 1623453
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatt 151  Q
    |||||||||||| | | |||| ||||| | |||||| ||||||| |||||||||||||||||||||   |||||| |  ||  |||| ||||||||||||    
T  1623341 gaacattttataaccgggaatcaaatttaataaactcgtaacaa-catagacatatatatttctatt--attttactcttaggaatcaacaaatataatt 1623437  T
Q  152 taaaacaaacacaccc 167  Q
    ||||||||||| ||||    
T  1623438 taaaacaaacataccc 1623453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 13539627 - 13539679
Alignment:
Q  53 aacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacat 105  Q
    ||||||||||||||| |||||||||| | |||| |||||||||||||||||||    
T  13539627 aacattttatacctgcgaataaaatttaataaatttgtaacaaacatagacat 13539679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 23944109 - 23944165
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaa 96  Q
    ||||||||| | |||||||||||| | |||||||||||| |||||||||||||||||    
T  23944109 ttctattcccaggaacattttatatccgagaataaaatttagtaaacttgtaacaaa 23944165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 43 - 166
Target Start/End: Complemental strand, 41298040 - 41297919
Alignment:
Q  43 tattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctaca 142  Q
    |||| |||| ||||||||||| | | |||||||||| | ||||||||||||| ||||| |  | ||||||||  | ||||||||||  ||| |||||||     
T  41298040 tatttctaaaaacattttatatccgggaataaaatttaataaacttgtaacatacataaatttgtatatttc--tttcattttattcataagaatctacg 41297943  T
Q  143 aatataatttaaaacaaacacacc 166  Q
    |||||||||| |||||||| ||||    
T  41297942 aatataatttgaaacaaacgcacc 41297919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 39995227 - 39995131
Alignment:
Q  69 gaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaacaaacacaccc 167  Q
    |||||||||| |||||||||||||||||||||| |||||| ||| |  |||||||||||| |    |||| |||| ||||| || ||||||||||||||    
T  39995227 gaataaaatttagtaaacttgtaacaaacataggcatatacattcc--tatcattttattcccgggaatcaacaattataacttgaaacaaacacaccc 39995131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 117
Target Start/End: Complemental strand, 11763469 - 11763419
Alignment:
Q  67 gagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    |||||||||||| |||||| || ||||||||||||||||||||||| ||||    
T  11763469 gagaataaaatttagtaaatttataacaaacatagacatatatattcctat 11763419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 167
Target Start/End: Original strand, 14137207 - 14137253
Alignment:
Q  121 attttatttctaaaaatctacaaatataatttaaaacaaacacaccc 167  Q
    |||||||||  |||||||||||||||||||||||||||||| |||||    
T  14137207 attttattttcaaaaatctacaaatataatttaaaacaaactcaccc 14137253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 70 - 166
Target Start/End: Original strand, 4685155 - 4685249
Alignment:
Q  70 aataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaacaaacacacc 166  Q
    ||||||||| | |||| || ||||||||||| |||| ||||||||  |||||||||||||| |||||| | | ||||| | || |||||||||||||    
T  4685155 aataaaatttaataaatttataacaaacataaacatgtatatttc--tatcattttatttccaaaaatatgcgaatatcacttgaaacaaacacacc 4685249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 37851805 - 37851929
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    |||||||||||  ||||||||||||| || ||||||||| ||||||||| || ||||||||   |  ||||||||  |||||||||||||  | ||||||    
T  37851805 ttctattcctagaaacattttatacccgaaaataaaatt-agtaaacttctagcaaacataagaaggtatatttc--tatcattttattttcagaaatct 37851901  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    || ||||| | || |||||||| |||||    
T  37851902 acgaatattacttgaaacaaacccaccc 37851929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 163
Target Start/End: Original strand, 39819662 - 39819763
Alignment:
Q  60 tatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaacaa 159  Q
    |||||| | |||| ||||| |||||||||||||||||||||| ||||| ||||  |  || |||||||||  |  ||||||||||||||| || ||||||    
T  39819662 tatacccgggaatgaaatttagtaaacttgtaacaaacataggcatatgtatt--ttcatgattttattttcaggaatctacaaatataacttgaaacaa 39819759  T
Q  160 acac 163  Q
    ||||    
T  39819760 acac 39819763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 165
Target Start/End: Complemental strand, 1723325 - 1723230
Alignment:
Q  68 agaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaacaaacacac 165  Q
    ||||||||||| | |||||||||||||||||| || || ||||||||   |||||||||||  |  |||| |||||| |||| || ||||||||||||    
T  1723325 agaataaaatttaataaacttgtaacaaacattgaaatgtatatttc--catcattttattcatggaaatatacaaacataacttgaaacaaacacac 1723230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 167
Target Start/End: Original strand, 7007551 - 7007644
Alignment:
Q  72 taaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaacaaacacaccc 167  Q
    ||||||| ||||||||||||  |||||| |||| |||||||||   ||||||||||  | || |||| |||||||||| || ||| ||||||||||    
T  7007551 taaaatttagtaaacttgtatgaaacattgacaaatatatttc--catcattttatccccaagaatcaacaaatataacttgaaataaacacaccc 7007644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 26310213 - 26310292
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaac--atagacatatatatttctat 117  Q
    ||||||||| | ||||||||||||||   ||||||| || | ||||||| ||||||||  ||||||||||| ||||||||    
T  26310213 ttctattcccaggaacattttataccaaggaataaattttaataaacttctaacaaacatatagacatatacatttctat 26310292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 6705890 - 6705765
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||  || ||||||||| | |  ||||     
T  6705890 ttctattcccaggaacattttatacctaggaataaaatttagtaaacttgtaacaaacatagacatatatatttc--taccattttattccaatgaatca 6705793  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||||||||| || ||||||||||||||    
T  6705792 acaaatataacttgaaacaaacacaccc 6705765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 40 - 164
Target Start/End: Complemental strand, 345956 - 345833
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttattt-ctaaaaatc 138  Q
    |||||||||||| ||| ||||||| | |||||||||||| |||||||||||||||||||||||||| | |||| |  ||||||||||||| |||  ||||    
T  345956 ttctattcctaaaaacgttttatatccgagaataaaatttagtaaacttgtaacaaacatagacatgtgtattcc--tatcattttatttcctaggaatc 345859  T
Q  139 tacaaatataatttaaaacaaacaca 164  Q
    ||| ||||||| ||||||||||||||    
T  345858 tacgaatataacttaaaacaaacaca 345833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 16968871 - 16968948
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| |  ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||| ||||    
T  16968871 ttctattcccagaaacattttatacccgagaataaaatttagtaaacttgtaacaaacatagacatatagattcctat 16968948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 7344208 - 7344083
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||||| |||||||||| ||||||||||||||||| |||| |||||| ||| |  ||||||||||||     |||| |    
T  7344208 ttctattcccaggaacattttatacctgggaataaaatttagtaaacttgtaacaaatataggcatatacattcc--tatcattttattctcggaaattt 7344111  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| |||||||| |||| |||||||||    
T  7344110 acaattataatttgaaacgaacacaccc 7344083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 170
Target Start/End: Original strand, 1316964 - 1317092
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||||| |||||||||  |||||||||||||||||||||| |||||| ||| |   ||||||||||| |    ||||     
T  1316964 ttctattcccaggaacattttatacctgggaataaaataaagtaaacttgtaacaaacataggcatatacattcc--aatcattttattcccgggaatca 1317061  T
Q  140 acaaatataatttaaaacaaacacacccata 170  Q
    |||| ||||| || |||||||||||||||||    
T  1317062 acaattataacttgaaacaaacacacccata 1317092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 2657646 - 2657771
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| ||||||||||||||||||||||  ||||| ||| |  |||||||||||| |    ||||     
T  2657646 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggtatatacattcc--tatcattttattcccgggaatca 2657743  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  2657744 acaattataacttgaaacaaacacaccc 2657771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 7053680 - 7053570
Alignment:
Q  55 cattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaa 154  Q
    |||||||||||   |||||||||| |||||||||||||||||||||| |||||| ||| |  |||||||||||| |    |||| |||| ||||| || |    
T  7053680 cattttatacccaggaataaaatttagtaaacttgtaacaaacataggcatatacattcc--tatcattttattcccgggaatcaacaattataacttga 7053583  T
Q  155 aacaaacacaccc 167  Q
    |||||||||||||    
T  7053582 aacaaacacaccc 7053570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 14170959 - 14171036
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | |||||||||||| |   |||||||||| |||||||||||||||||||||| |||||| ||| ||||    
T  14170959 ttctattcccaggaacattttatatccaggaataaaatttagtaaacttgtaacaaacataggcatatagattcctat 14171036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 14781745 - 14781685
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacata 100  Q
    ||||||||| | || ||||||||||||  |||||||||| |||||||||||||||||||||    
T  14781745 ttctattcccatgagcattttatacctaggaataaaatttagtaaacttgtaacaaacata 14781685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 172
Target Start/End: Original strand, 8029319 - 8029409
Alignment:
Q  80 agtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaacaaacacacccataat 172  Q
    |||||||||||||||||||||| |||||| |||||  |||||||||||| |    |||| |||| ||||| || |||||||||||||| ||||    
T  8029319 agtaaacttgtaacaaacataggcatatacatttc--tatcattttattcccgggaatcaacaattataacttgaaacaaacacacccttaat 8029409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 18897867 - 18897944
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| |  |||||||||||||   ||||||| || | |||||||||||||||||||| |||||| ||||||||    
T  18897867 ttctattcccagaaacattttataccaaggaataaattttaataaacttgtaacaaacataggcatatacatttctat 18897944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 149
Target Start/End: Complemental strand, 21008149 - 21008042
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |||||||||| ||    | |||||||||| ||||||| ||||||||| | || ||||||||||  | |||||||||||| | | |||||     
T  21008149 ttctattcccaagaacatttcatgttcgggaataaaatttagtaaacctgtaacaaatagaggcatatatatt--tttatcattttattcccagaaatca 21008052  T
Q  140 acaaatataa 149  Q
    ||||||||||    
T  21008051 acaaatataa 21008042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 29252652 - 29252612
Alignment:
Q  225 ttaatattaaaaaatcaaatataatgatatagaattattaa 265  Q
    ||||||||||||||| |||| |||||||||||| |||||||    
T  29252652 ttaatattaaaaaataaaatttaatgatatagagttattaa 29252612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 5518629 - 5518504
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||| ||||||||||||  |||||||||||| ||   ||||     
T  5518629 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatatatttc--tatcattttattcctgggaatca 5518532  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||||||||| || ||||||||||||||    
T  5518531 acaaatataacttgaaacaaacacaccc 5518504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 13521268 - 13521392
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |||||||||||||||  | |||||||||| ||||||||||||||||||| |||||| |||||||||||  |||| |||  | ||||||||    
T  13521268 ttctattcccaagaacattttatactcgtgaataaaatttagtaaacttgtaacaaacacagacatgtatatttctat--cattgtatccc-aaaaatct 13521364  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    ||||||||||||  ||||||||||||||    
T  13521365 acaaatataattagaaacaaacacaccc 13521392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 19083218 - 19083105
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatt 151  Q
    |||||||||||||  | |||||||||| ||||||||| |||||||||||||||| ||||||||  ||||||| |||| | |||||||||| |||||||||    
T  19083218 gaacattttatactcgtgaataaaatttagtaaacttataacaaacatagacatgtatatttc--tatcattgtattcccaaaaatctacgaatataatt 19083121  T
Q  152 taaaacaaacacaccc 167  Q
    | ||||||||||||||    
T  19083120 tgaaacaaacacaccc 19083105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 19131106 - 19130993
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatt 151  Q
    |||||||||||||  | |||||||||| ||||||||| |||||||||||||||| ||||||||  ||||||| |||| | |||||||||| |||||||||    
T  19131106 gaacattttatactcgtgaataaaatttagtaaacttataacaaacatagacatgtatatttc--tatcattgtattcccaaaaatctacgaatataatt 19131009  T
Q  152 taaaacaaacacaccc 167  Q
    | ||||||||||||||    
T  19131008 tgaaacaaacacaccc 19130993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 43 - 166
Target Start/End: Complemental strand, 20505111 - 20504990
Alignment:
Q  43 tattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctaca 142  Q
    |||||| | ||| |||||||||  | |||||||||| |||||||||||||||||||||||||| ||||||||  ||||||||||||   | |||||||||    
T  20505111 tattcccaggaatattttatactcgtgaataaaatttagtaaacttgtaacaaacatagacatgtatatttc--tatcattttattctcagaaatctaca 20505014  T
Q  143 aatataatttaaaacaaacacacc 166  Q
    ||||||||||||||||||| ||||    
T  20505013 aatataatttaaaacaaacgcacc 20504990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 52630720 - 52630845
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||| |  |||||||||||| | |  ||||     
T  52630720 ttctattcccaggaacattttatacccgagaataaaatttagtaaacttgtaacaaacatagacatatacattcc--tatcattttattcccaggaatca 52630817  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  52630818 acaattataacttgaaacaaacacaccc 52630845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 29091613 - 29091738
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||| |||  |||||||||||| |||||||||||||||||||||||||||||||||  | ||||||||||||   |  ||||     
T  29091613 ttctattccgatgaacattttttactcgagaataaaatttagtaaacttgtaacaaacatagacatatatatt--tttatcattttattatcaggaatca 29091710  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||||||||| || ||||||||||||||    
T  29091711 acaaatataacttgaaacaaacacaccc 29091738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 53 - 165
Target Start/End: Complemental strand, 38519174 - 38519064
Alignment:
Q  53 aacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataattt 152  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||  ||| | ||||||||| | | |||||||| |||||||||||||||||| ||    
T  38519174 aacattttatacctgggaataaaatttagtaaacttgtaacaaacataagcatctgtatttctat-tga-tttatttccaaaaatctacaaatataactt 38519077  T
Q  153 aaaacaaacacac 165  Q
     ||||||||||||    
T  38519076 gaaacaaacacac 38519064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 172
Target Start/End: Complemental strand, 20260211 - 20260081
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||| |||||| ||| |   ||||||||||| | |  ||||     
T  20260211 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatacattcc--aatcattttattcccaggaatca 20260114  T
Q  140 acaaatataatttaaaacaaacacacccataat 172  Q
    |||| ||||| || |||||||||||||||||||    
T  20260113 acaattataacttgaaacaaacacacccataat 20260081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 36361729 - 36361806
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||| |||||| ||| ||||    
T  36361729 ttctattcctaggaacattttatacctgggaataaaatttagtaaacttgtaacaaacataggcatatacattcctat 36361806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 12190302 - 12190177
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||| ||| || ||| |  |||||||||||| |  ||||||     
T  12190302 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatgtacattcc--tatcattttattcccgaaaatca 12190205  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  12190204 acaattataacttgaaacaaacacaccc 12190177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 52 - 166
Target Start/End: Complemental strand, 13931997 - 13931885
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatt 151  Q
    |||||||||||||| |  ||||||||| |||||||||||||||||||||| ||||| ||||  | ||| |||||||| |||  ||||||||||||||| |    
T  13931997 gaacattttatacccggaaataaaatttagtaaacttgtaacaaacataggcatatgtatt--tttatgattttattcctaggaatctacaaatataact 13931900  T
Q  152 taaaacaaacacacc 166  Q
    | |||||||||||||    
T  13931899 tcaaacaaacacacc 13931885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 161
Target Start/End: Original strand, 30240957 - 30241075
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| || ||| |||||| || | |||||||||| | |||||||||||||||||||| ||||||||||||  |||||||||||| | |||||||     
T  30240957 ttctattcccaataactttttattccgg-gaataaaatttaataaacttgtaacaaacataggcatatatatttc--tatcattttattaccaaaaatca 30241053  T
Q  140 acaaatataatttaaaacaaac 161  Q
    |||||||||| || ||||||||    
T  30241054 acaaatataacttgaaacaaac 30241075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 172
Target Start/End: Complemental strand, 4683499 - 4683369
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||||| |||||||||||| | | |||||||||| |||||| ||||||||||||||| |||||| ||| |  |||||||||||||||   ||||     
T  4683499 ttctattcctaggaacattttatatccgggaataaaatttagtaaatttgtaacaaacataggcatatacattcc--tatcattttatttctgggaatca 4683402  T
Q  140 acaaatataatttaaaacaaacacacccataat 172  Q
    |||| ||||| || ||||||| |||||| ||||    
T  4683401 acaattataaattgaaacaaagacacccttaat 4683369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 48916147 - 48916070
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | |||||||||||||| || ||||||||| |||||||||||||||||||||| |||||| ||||||||    
T  48916147 ttctattcccatgaacattttatacccgaaaataaaatttagtaaacttgtaacaaacataggcatatacatttctat 48916070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 1007694 - 1007819
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||| | | |||||||||| |||||||||||||||||| ||||||||||||||   |||||||||||||      ||||     
T  1007694 ttctattcccaggaacattttatatccgggaataaaatttagtaaacttgtaacaaacctagacatatatatt--catatcattttattctcgggaatca 1007791  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||||||||| || ||||||||||||||    
T  1007792 acaaatataacttgaaacaaacacaccc 1007819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 1597467 - 1597342
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||| | | |||||||||| |||||||||||||||||||||| |||||| ||| |  |||||||||||| |   |||||     
T  1597467 ttctattcccaggaacattttatatccgggaataaaatttagtaaacttgtaacaaacataggcatatacattcc--tatcattttattcccggaaatca 1597370  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  1597369 acaattataacttgaaacaaacacaccc 1597342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 2430443 - 2430568
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||| |||||| ||| |  |||||||||||| |    ||||     
T  2430443 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatacattcc--tatcattttattcccgggaatca 2430540  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  2430541 acaattataacttgaaacaaacacaccc 2430568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 39329555 - 39329623
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatata 108  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||||||||||    
T  39329555 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatagacatata 39329623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 47037404 - 47037529
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || |||||||||||||||||||||| ||||||||||||  |||||||||||| |    ||||     
T  47037404 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatatatttc--tatcattttattcccgggaatca 47037501  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  47037502 acaattataacttgaaacaaacacaccc 47037529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 69 - 164
Target Start/End: Complemental strand, 52186142 - 52186049
Alignment:
Q  69 gaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaacaaacaca 164  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||  ||||||||||||   | ||||| |||||||||| || |||||||||||    
T  52186142 gaataaaatttagtaaacttgtaacaaatatagacatatatatttc--tatcattttattataagaaatcaacaaatataacttgaaacaaacaca 52186049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 52699591 - 52699466
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||| ||||||||| | ||||||||||||||||||||||||||||||||| ||| | |||| |  |||||||||||| | |  |||||    
T  52699591 ttctattcccaggaacgttttatacccgggaataaaattcagtaaacttgtaacaaacataggcatgtgtattcc--tatcattttattcccaggaatct 52699494  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    || ||||||| || |||||||| |||||    
T  52699493 acgaatataacttgaaacaaacgcaccc 52699466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 40 - 165
Target Start/End: Complemental strand, 9831995 - 9831872
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || |||||||||||||||||||||| |||||| |||||  |||||||||||| ||   ||||     
T  9831995 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattcctgggaatca 9831898  T
Q  140 acaaatataatttaaaacaaacacac 165  Q
    |||| ||||| || ||||||||||||    
T  9831897 acaattataacttgaaacaaacacac 9831872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 17475443 - 17475369
Alignment:
Q  43 tattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    |||||| | |||||||||||||| | |||||||||| ||||||||| ||||||||||| ||||||||||||||||    
T  17475443 tattcccaggaacattttatacccgggaataaaatttagtaaacttataacaaacataaacatatatatttctat 17475369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 172
Target Start/End: Complemental strand, 1228003 - 1227874
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |  |||||||||||||||| ||||||||| | |||||||||||||| ||||| ||||| ||||  | ||| |||||||||  || |||||    
T  1228003 ttctattccaagaaacattttatacctgaaaataaaatttaataaacttgtaacaagcataggcatatgtatt--tttatgattttattttcaagaatct 1227906  T
Q  140 acaaatataatttaaaacaaacacacccataat 172  Q
    || ||||||| |||||| |||||||||| ||||    
T  1227905 acgaatataacttaaaa-aaacacacccgtaat 1227874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 13653798 - 13653875
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | |||||||||||| | | |||||||||| |||||||||||||||||| || ||||||||||||||||    
T  13653798 ttctattcccaggaacattttatatccgggaataaaatttagtaaacttgtaacaaacgtatacatatatatttctat 13653875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 14788670 - 14788747
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | |||||||||||||| | ||||| |||| ||||||||||||||||||||||||||||| ||| ||||    
T  14788670 ttctattcccaggaacattttatacccgggaatataatttagtaaacttgtaacaaacatagacatatacattcctat 14788747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 3572690 - 3572565
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| | |||||||||||||||||||| |||||| ||| |  |||||||||||| |    ||||     
T  3572690 ttctattcccaggaacattttatacccgggaataaaatttaataaacttgtaacaaacataggcatatacattcc--tatcattttattcccgggaatca 3572593  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  3572592 acaattataacttgaaacaaacacaccc 3572565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 8331961 - 8332086
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||| ||||||||||| |||||| ||| |   ||||||||||| |   |||||     
T  8331961 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgcaacaaacataggcatatacattcc--aatcattttattcccggaaatca 8332058  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  8332059 acaattataacttgaaacaaacacaccc 8332086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 9115784 - 9115909
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || |||||||||||||||||||||| |||||| |||||  |||||||||||| |    ||||     
T  9115784 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattcccgggaatca 9115881  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  9115882 acaattataacttgaaacaaacacaccc 9115909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 168
Target Start/End: Complemental strand, 16257128 - 16257007
Alignment:
Q  45 ttcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaa 144  Q
    ||||||||||  |||||||||| ||||||||||| | ||||||||||| |||||| || || ||||||  | ||| |||||||| | | |||| ||||||    
T  16257128 ttcctaagaatcttttatacctaagaataaaatttaataaacttgtaaaaaacattgaaatgtatatt--tttatgattttattccaagaaatatacaaa 16257031  T
Q  145 tataatttaaaacaaacacaccca 168  Q
    ||||| || |||||||||||||||    
T  16257030 tataacttcaaacaaacacaccca 16257007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 39930404 - 39930529
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || |||||||||||||||||||||| |||||| |||||  |||||||||||| |    ||||     
T  39930404 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattcccgggaatca 39930501  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  39930502 acaattataacttgaaacaaacacaccc 39930529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 46666655 - 46666723
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatata 108  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||| ||||||    
T  46666655 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatata 46666723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 25789710 - 25789834
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || |||||||||||||||||||||| |||||| |||||  |||||||||||| |    ||||     
T  25789710 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattcccgggaatca 25789807  T
Q  140 acaaatataatttaaaacaaacacacc 166  Q
    |||| ||||| || |||||||||||||    
T  25789808 acaattataacttgaaacaaacacacc 25789834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 107
Target Start/End: Original strand, 46960574 - 46960641
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatat 107  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||| |||||    
T  46960574 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatat 46960641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 165
Target Start/End: Original strand, 32824869 - 32824992
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||| |||||||| |  ||||||||| |||||||||||||||||||||| |||||| ||| |  ||| ||||||||||   |||||     
T  32824869 ttctattcccaggaacaatttatacccggaaataaaatttagtaaacttgtaacaaacataggcatatacattcc--tattattttatttccggaaatca 32824966  T
Q  140 acaaatataatttaaaacaaacacac 165  Q
    |||| ||||| || ||||||||||||    
T  32824967 acaattataacttgaaacaaacacac 32824992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 2632799 - 2632876
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | |||||||||||||| | |||||||||| | |||||||||||||||||||| |||||| ||| ||||    
T  2632799 ttctattcccaggaacattttatacccgggaataaaatttaataaacttgtaacaaacataggcatatacattcctat 2632876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 57 - 161
Target Start/End: Complemental strand, 9011268 - 9011167
Alignment:
Q  57 ttttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaa 156  Q
    ||||||||| || ||||||||| ||||||||||||| |||||||||||| |||||| |  |||||||||||||  || ||||||| ||||||| || |||    
T  9011268 ttttatacc-gaaaataaaatttagtaaacttgtaataaacatagacatgtatattcc--tatcattttattttcaagaatctacgaatataacttgaaa 9011172  T
Q  157 caaac 161  Q
    |||||    
T  9011171 caaac 9011167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 160
Target Start/End: Complemental strand, 11014566 - 11014448
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |  ||||||||||| | | ||||| |||| | |||||||||||||||||||||||| ||||||||  |||||||||||| | |  |||||    
T  11014566 ttctattcccagaaacattttatatccgtgaatataatttattaaacttgtaacaaacatagacatgtatatttc--tatcattttattcccaggaatct 11014469  T
Q  140 acaaatataatttaaaacaaa 160  Q
    ||| |||||| || |||||||    
T  11014468 acatatataacttgaaacaaa 11014448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 52 - 152
Target Start/End: Original strand, 13440354 - 13440452
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatt 151  Q
    |||||||||||||  | |||||||||| |||||| || |||||||||||| ||| ||||||||  ||||||| |||| | |||||||||| |||||||||    
T  13440354 gaacattttatactcgtgaataaaatttagtaaaattctaacaaacatagtcatttatatttc--tatcattgtattcccaaaaatctacgaatataatt 13440451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 35187403 - 35187480
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | ||||||||||||||   ||||||| || ||||||||||||||||||||| ||||||| ||||||||    
T  35187403 ttctattcccacgaacattttataccaaggaataaattttagtaaacttgtaacaaacataaacatatacatttctat 35187480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 6911455 - 6911565
Alignment:
Q  55 cattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaa 154  Q
    |||||||||||   |||||||||| |||||||||||||||||||||| |||||| | |||| |||||||||||| |  | |||| |||| ||||| || |    
T  6911455 cattttatacccaggaataaaatttagtaaacttgtaacaaacataggcatataca-ttct-tatcattttattcccgagaatcaacaattataacttga 6911552  T
Q  155 aacaaacacaccc 167  Q
    |||||||||||||    
T  6911553 aacaaacacaccc 6911565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 50190890 - 50190822
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatata 108  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||| ||| ||||||    
T  50190890 ttctattccaaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacgtaggcatata 50190822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 167
Target Start/End: Complemental strand, 49823009 - 49822917
Alignment:
Q  73 aaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaacaaacacaccc 167  Q
    |||||| |||||||||||||||||||||| |||||| |||||  |||||||||||| |  | |||| |||| ||||| || ||||||||||||||    
T  49823009 aaaatttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattcccgagaatcaacaattataacttgaaacaaacacaccc 49822917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 51445204 - 51445119
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatt 128  Q
    ||||||||| | ||||||||||||| | |||||||| || ||||||||||||||||||||||  ||||| |||  ||||||||||||||    
T  51445204 ttctattcccaggaacattttatac-taagaataaattttagtaaacttgtaacaaacataggtatatacatt--tatatcattttatt 51445119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 6978746 - 6978842
Alignment:
Q  69 gaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaacaaacacaccc 167  Q
    ||||||| || |||||||||||||||||||||| |||||| |||||  |||||||||||| |    |||| |||| ||||| || ||||||||||||||    
T  6978746 gaataaattttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattcccgggaatcaacaattataacttgaaacaaacacaccc 6978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 37336569 - 37336514
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaa 95  Q
    ||||||||| || || |||||||| |||||||||||||| ||||||||||||||||    
T  37336569 ttctattcccaataatattttatatctgagaataaaatttagtaaacttgtaacaa 37336514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 24116448 - 24116391
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatat 109  Q
    |||| ||||||||| | |||||||||| ||||||||||| ||||||||| ||||||||    
T  24116448 gaacgttttatacccgggaataaaatttagtaaacttgtgacaaacataaacatatat 24116391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 38964804 - 38964727
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | ||||||||||||||   ||||||| ||  ||||||||||||||||||||  |||||| ||||||||    
T  38964804 ttctattcccaggaacattttataccaaggaataaatttttgtaaacttgtaacaaacataagcatatacatttctat 38964727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 37436733 - 37436669
Alignment:
Q  53 aacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||||| | || ||||||||| |||||||||||||||||||||  |||||| ||| ||||    
T  37436733 aacattttatatccgaaaataaaatttagtaaacttgtaacaaacatatgcatatacattcctat 37436669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 164
Target Start/End: Complemental strand, 31806852 - 31806759
Alignment:
Q  67 gagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaacaaacaca 164  Q
    |||||||||||| |||||||  ||||||||||||  ||| |||||||||||  |||||||||   |  ||||||||||||||| || |||||||||||    
T  31806852 gagaataaaatttagtaaac--gtaacaaacataagcatgtatatttctat--cattttattctcaggaatctacaaatataacttgaaacaaacaca 31806759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 37261823 - 37261918
Alignment:
Q  69 gaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaacaaacacacc 166  Q
    |||||||||| | |||||||||||||||||||  ||| ||||||||||||  ||||||||   |  ||||||  |||||||||| |||||||| ||||    
T  37261823 gaataaaatttaataaacttgtaacaaacatatgcatgtatatttctata--attttattctcaggaatctatgaatataatttgaaacaaacgcacc 37261918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 3939503 - 3939564
Alignment:
Q  56 attttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    |||| ||||||  |||||||||| || ||||||||||||||||||  ||| |||||||||||    
T  3939503 atttcatacctaggaataaaatttagcaaacttgtaacaaacataagcatgtatatttctat 3939564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 5806412 - 5806356
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaa 96  Q
    ||||||||| | ||||||||||||||   ||||||| || |||||||||||||||||    
T  5806412 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaa 5806356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 19094072 - 19094185
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatt 151  Q
    |||||||||||| ||   ||||||||| | |||||||| |||||||||||  ||  |||||||   |||||| |||||| |  ||| ||||||||||| |    
T  19094072 gaacattttatatctagaaataaaatttaataaacttgcaacaaacataggaatgcatatttc--catcattctatttccaggaatttacaaatataact 19094169  T
Q  152 taaaacaaacacaccc 167  Q
    | ||||||||||||||    
T  19094170 tgaaacaaacacaccc 19094185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 114
Target Start/End: Original strand, 37727001 - 37727045
Alignment:
Q  70 aataaaattcagtaaacttgtaacaaacatagacatatatatttc 114  Q
    ||||||||| || |||||||||||||||||||| || ||||||||    
T  37727001 aataaaatttagaaaacttgtaacaaacatagatatgtatatttc 37727045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 43 - 166
Target Start/End: Complemental strand, 23418 - 23297
Alignment:
Q  43 tattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctaca 142  Q
    |||||| | ||| |||||||||  | |||||||||| |||||||||||||||||||||||||| ||||||||||||  ||||||||   | |||||||||    
T  23418 tattcccaggaatattttatactcgtgaataaaatttagtaaacttgtaacaaacatagacatgtatatttctata--attttattctcagaaatctaca 23321  T
Q  143 aatataatttaaaacaaacacacc 166  Q
    ||||||||||||||||||| ||||    
T  23320 aatataatttaaaacaaacgcacc 23297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 4e-26; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 42012304 - 42012179
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||||| |||||||||||||  |||||||||||| |||||| ||||||||||||||||||||| ||||||  |||||||||||| |  | ||||     
T  42012304 ttctattcctaggaacattttatactcgagaataaaatttagtaaatttgtaacaaacatagacatatgtatttc--tatcattttattcccgagaatca 42012207  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||||||||  || ||||||||||||||    
T  42012206 acaaatatagcttcaaacaaacacaccc 42012179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 53 - 166
Target Start/End: Complemental strand, 15200658 - 15200547
Alignment:
Q  53 aacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataattt 152  Q
    |||||||||| ||||||||||||||| | |||| || |||||||||||||||||||||||  |||||||||||||||  ||||||||| |||||||| ||    
T  15200658 aacattttatgcctgagaataaaatttaataaatttataacaaacatagacatatatatt--tatatcattttattttcaaaaatctataaatataactt 15200561  T
Q  153 aaaacaaacacacc 166  Q
     |||||||| ||||    
T  15200560 gaaacaaacgcacc 15200547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 168
Target Start/End: Original strand, 36703820 - 36703946
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || ||||||||||||||||||||||||||||| |||||  |||||||||||| |  | ||||     
T  36703820 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacatagacatatacatttc--tatcattttattcccgataatca 36703917  T
Q  140 acaaatataatttaaaacaaacacaccca 168  Q
    |||| ||||| || |||||||||||||||    
T  36703918 acaattataacttgaaacaaacacaccca 36703946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 40275880 - 40275754
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||| |||| ||| ||| |||||||||| || ||||||||||||||||||||||||| ||||| ||||  |||||||| | ||||||||    
T  40275880 ttctattcccaggaatatttcatatctgggaataaaatttagcaaacttgtaacaaacatagacatatgtatttttata--attttattcccaaaaatct 40275783  T
Q  140 acaaatataa-tttaaaacaaacacaccc 167  Q
    |||||||||| || |||| ||||||||||    
T  40275782 acaaatataacttgaaaaaaaacacaccc 40275754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 18412155 - 18412280
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| |||||||||||| |||||||||||||||||||||| |||||| ||| |  |||||||||||| | |  ||||     
T  18412155 ttctattcccaggaacattttatacccgagaataaaatttagtaaacttgtaacaaacataggcatatacattcc--tatcattttattcccaggaatca 18412252  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    | || ||||| || ||||||||||||||    
T  18412253 ataattataacttgaaacaaacacaccc 18412280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 167
Target Start/End: Original strand, 27481319 - 27481428
Alignment:
Q  56 attttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaa 155  Q
    |||||||||| | |||||||||| |||||||||||||||||||||| |||||| ||| |  |||||||||||||| ||||||| | || ||||| || ||    
T  27481319 attttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatacattcc--tatcattttatttccaaaaatcaaaaattataacttgaa 27481416  T
Q  156 acaaacacaccc 167  Q
    ||||||||||||    
T  27481417 acaaacacaccc 27481428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 29543140 - 29543015
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| ||||||||||||||||||||||||||||| ||| |   ||||||||||| | |  ||||     
T  29543140 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatagacatatacattcc--aatcattttattcccaggaatca 29543043  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  29543042 acaattataacttgaaacaaacacaccc 29543015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 173
Target Start/End: Complemental strand, 12970655 - 12970524
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||| |||||| ||| |  |||||||||||| |    ||||     
T  12970655 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatacattcc--tatcattttattcccgggaatca 12970558  T
Q  140 acaaatataatttaaaacaaacacacccataata 173  Q
    |||| ||||| || |||||||||||||| |||||    
T  12970557 acaattataacttgaaacaaacacacccttaata 12970524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 174
Target Start/End: Complemental strand, 43347007 - 43346888
Alignment:
Q  53 aacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataattt 152  Q
    |||| |||||||||| |||||||||| ||||||||||||||||||| | |||||| ||||  | ||| |||||||||  |  ||||||||||||||| ||    
T  43347007 aacaatttatacctgggaataaaatttagtaaacttgtaacaaacacatacatatgtatt--tttatgattttattttcaggaatctacaaatataactt 43346910  T
Q  153 aaaacaaacacacccataataa 174  Q
     |||||||||||||| ||||||    
T  43346909 gaaacaaacacacccgtaataa 43346888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 40 - 149
Target Start/End: Original strand, 27480955 - 27481062
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||    |||||||||| ||||||||||||||||||||||||||| ||||| |  ||||||||||||   |||||||     
T  27480955 ttctattcccatgaacattttatacacaggaataaaatttagtaaacttgtaacaaacatagacatacatattcc--tatcattttattctcaaaaatca 27481052  T
Q  140 acaaatataa 149  Q
    ||||||||||    
T  27481053 acaaatataa 27481062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 40 - 149
Target Start/End: Complemental strand, 31583187 - 31583081
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||||  |||| ||||||||  | |||||||||| ||||||||||||||||||||||||| |||||||||  |||| ||||||||| | ||||||    
T  31583187 ttctattcctgggaacgttttatactcgggaataaaatttagtaaacttgtaacaaacatagaca-atatatttc--tatcgttttatttccagaaatct 31583091  T
Q  140 acaaatataa 149  Q
    || |||||||    
T  31583090 acgaatataa 31583081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 40 - 165
Target Start/End: Original strand, 32535883 - 32536006
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| || |||||||||||||    |||||| || ||||||||||||||||||||| ||||||| |||||  |||||||||||| ||   ||||     
T  32535883 ttctattcccaataacattttataccaagaaataaattttagtaaacttgtaacaaacataaacatatacatttc--tatcattttattcctgggaatca 32535980  T
Q  140 acaaatataatttaaaacaaacacac 165  Q
    |||| ||||| |||||||||||||||    
T  32535981 acaattataacttaaaacaaacacac 32536006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 128
Target Start/End: Original strand, 6091661 - 6091747
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatt 128  Q
    ||||||||| ||||||||||||||||   ||||||| || |||||||||||||||||||||| |||||| |||  ||||||||||||||    
T  6091661 ttctattcccaagaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatt--tatatcattttatt 6091747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 8646516 - 8646439
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | |||||||||||| | | |||||||||| ||||||||||||||||||||||||||||| ||| ||||    
T  8646516 ttctattcccaggaacattttataaccgggaataaaatttagtaaacttgtaacaaacatagacatatacattcctat 8646439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 165
Target Start/End: Complemental strand, 26637139 - 26637045
Alignment:
Q  69 gaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaacaaacacac 165  Q
    |||||||||| ||||||||||||||||| ||||||||||||| |||  |||||||||||| | |  |||| |||||||||| || ||||||||||||    
T  26637139 gaataaaatttagtaaacttgtaacaaatatagacatatataattc--tatcattttattcccattaatcaacaaatataacttgaaacaaacacac 26637045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 28429676 - 28429754
Alignment:
Q  69 gaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataa 149  Q
    |||||||||| ||||||||||||||||| |||| ||| ||||||||  ||||||||||||||||| ||||||| |||||||    
T  28429676 gaataaaatttagtaaacttgtaacaaatataggcatgtatatttc--tatcattttatttctaagaatctacgaatataa 28429754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 555819 - 555706
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatt 151  Q
    ||||||||||||||   ||||||| || ||||||||||||||||||||||||||||| |||||  |||||||||||| |    |||| |||| ||||| |    
T  555819 gaacattttataccaaggaataaattttagtaaacttgtaacaaacatagacatatacatttc--tatcattttattcccgggaatcaacaattataact 555722  T
Q  152 taaaacaaacacaccc 167  Q
    | ||||||||||||||    
T  555721 tgaaacaaacacaccc 555706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 4765685 - 4765560
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| | |||||||||||||||||||| |||||| ||| |  |||||||||||| |    ||||     
T  4765685 ttctattcccaggaacattttatacccgggaataaaatttaataaacttgtaacaaacataggcatatacattcc--tatcattttattcccgggaatca 4765588  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  4765587 acaattataacttgaaacaaacacaccc 4765560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 14206946 - 14206821
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |  |||||||||||||   ||||||| || |||||||||||||||||||||| |||||| |||||  |||||||||||| |   |||||     
T  14206946 ttctattcccagaaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattcccggaaatca 14206849  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  14206848 acaattataacttgaaacaaacacaccc 14206821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 19065630 - 19065505
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| |  ||||||||| |||||||||||||||||||||| |||||| ||| |  |||||||||||| |    ||||     
T  19065630 ttctattcccaggaacattttatacccggaaataaaatttagtaaacttgtaacaaacataggcatatacattcc--tatcattttattcccgggaatca 19065533  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  19065532 acaattataacttgaaacaaacacaccc 19065505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 22936037 - 22935969
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatata 108  Q
    ||||||||| | |||||||||||||||| |||||||||  |||||||||||||||||||||| ||||||    
T  22936037 ttctattcccaggaacattttatacctgggaataaaataaagtaaacttgtaacaaacataggcatata 22935969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 36978267 - 36978166
Alignment:
Q  69 gaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaacaaacacaccca 168  Q
    ||||||||||  ||||  ||||||||||||||||||||||||||||  |||||||||||||  | |||| ||| ||| |||||| ||||||||||||| |    
T  36978267 gaataaaattttgtaagtttgtaacaaacatagacatatatatttc--tatcattttattttcagaaatatacgaatgtaatttgaaacaaacacaccta 36978170  T
Q  169 taat 172  Q
    ||||    
T  36978169 taat 36978166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 166
Target Start/End: Complemental strand, 3913323 - 3913201
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    |||||||||||| ||||||||||||||| |||||||||| |||||| |||||| ||||||| |||| ||||||||  |||| ||||||| | || |||||    
T  3913323 ttctattcctaa-aacattttatacctg-gaataaaatttagtaaatttgtaataaacatacacatgtatatttc--tatcgttttattcccaagaatct 3913228  T
Q  140 acaaatataatttaaaacaaacacacc 166  Q
    || ||||||| || ||| |||| ||||    
T  3913227 acgaatataacttgaaataaacgcacc 3913201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 40 - 170
Target Start/End: Original strand, 20962536 - 20962664
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |  ||| ||||||| | |||||||||||| |||||||||||||||||||||| ||  | |||| |  |||||||||||| | || |||||    
T  20962536 ttctattcccagaaacgttttatatccgagaataaaatttagtaaacttgtaacaaacataggcacgtgtattcc--tatcattttattcccaagaatct 20962633  T
Q  140 acaaatataatttaaaacaaacacacccata 170  Q
    || ||||||| || |||||||||||| ||||    
T  20962634 acgaatataacttgaaacaaacacactcata 20962664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 11855780 - 11855703
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | |||||||||||| | | |||||||||| |||||||||||||||||||||| |||||| ||| ||||    
T  11855780 ttctattcccaggaacattttatatccgggaataaaatttagtaaacttgtaacaaacataggcatatacattcctat 11855703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 6930586 - 6930657
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatat 111  Q
    ||||||||| || || |||||||| | || ||||||||| ||||||||||||||||||||| ||||||||||    
T  6930586 ttctattcccaataatattttatatccgaaaataaaatttagtaaacttgtaacaaacataaacatatatat 6930657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 17251770 - 17251835
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    |||||||||||||  |||||||||||| |||||| || ||||||||||| |||| |||||||||||    
T  17251770 gaacattttatactcgagaataaaatttagtaaaattataacaaacataaacatgtatatttctat 17251835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 112
Target Start/End: Complemental strand, 35348650 - 35348579
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatt 112  Q
    ||||||||| || |||||||||||||  | |||| |||| |||||||||||||||||||||||||| ||||||    
T  35348650 ttctattcccaaaaacattttatacccaa-aatacaatttagtaaacttgtaacaaacatagacatgtatatt 35348579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 161
Target Start/End: Original strand, 28023779 - 28023898
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaa-aaatc 138  Q
    ||||||||| ||  ||||||||||  ||||||||||||| | | ||||||||||||| ||||||||  |||||| ||||  |||||| |||||| |||||    
T  28023779 ttctattcccaaacacattttatatgtgagaataaaatttaatgaacttgtaacaaatatagacatgaatatttttata--atttta-ttctaagaaatc 28023875  T
Q  139 tacaaatataatttaaaacaaac 161  Q
    || ||||||||||| ||| ||||    
T  28023876 tataaatataatttgaaataaac 28023898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 28602515 - 28602569
Alignment:
Q  53 aacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatata 108  Q
    ||||||||||||| | |||||||||| |||||||||||||||||||||| ||||||    
T  28602515 aacattttataccgg-gaataaaatttagtaaacttgtaacaaacataggcatata 28602569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 161
Target Start/End: Original strand, 8406840 - 8406959
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| || |||||||||||||| |||| ||| || ||| |  ||||||||||||    ||||||     
T  8406840 ttctattcccaggaacattttatacccgggaataaaatttagcaaacttgtaacaaatataggcatgtacattcc--tatcattttattctcgaaaatca 8406937  T
Q  140 acaaatataatttaaaacaaac 161  Q
    |||| ||||| || ||||||||    
T  8406938 acaattataacttgaaacaaac 8406959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 166
Target Start/End: Complemental strand, 19089842 - 19089718
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| || ||| ||||||||   ||||||||||| | ||||||| ||||||||||| ||||  |||||||||| |  ||||||| | |  ||| |    
T  19089842 ttctattcccaaaaacgttttatactcaagaataaaatttaataaacttataacaaacataaacatgcatatttctattt--ttttattcccaggaattt 19089745  T
Q  140 acaaatataatttaaaacaaacacacc 166  Q
    || ||||||| ||||||||||| ||||    
T  19089744 acgaatataacttaaaacaaacgcacc 19089718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 41783732 - 41783685
Alignment:
Q  53 aacattttatacctgagaataaaattcagtaaacttgtaacaaacata 100  Q
    ||||||||||| | |||||||||||| ||||||||| |||||||||||    
T  41783732 aacattttatatccgagaataaaatttagtaaacttataacaaacata 41783685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 1664688 - 1664758
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcat 122  Q
    |||||||||||| |||  ||||||||| ||| || ||||||||||||||  |||||| |||||||| ||||    
T  1664688 gaacattttatagctggtaataaaatttagtcaatttgtaacaaacataagcatatagatttctatctcat 1664758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 16720321 - 16720260
Alignment:
Q  56 attttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    |||||||||| || ||||||||| |||||||||| ||||||||||   || |||||||||||    
T  16720321 attttatacccgataataaaatttagtaaacttgcaacaaacatatgtatgtatatttctat 16720260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 9e-24; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 40 - 171
Target Start/End: Complemental strand, 34049722 - 34049593
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   |||||||||| ||||||||||||||||||||||||||||| ||| |  ||||||||||||||    ||||     
T  34049722 ttctattcccaggaacattttataccctggaataaaatttagtaaacttgtaacaaacatagacatatacattcc--tatcattttatttccgggaatca 34049625  T
Q  140 acaaatataatttaaaacaaacacacccataa 171  Q
    |||| ||||| || ||||||||||||||||||    
T  34049624 acaattataacttgaaacaaacacacccataa 34049593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 162
Target Start/End: Complemental strand, 10400914 - 10400810
Alignment:
Q  56 attttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaa 155  Q
    ||||||||||  ||||||||||| ||||||||||||| ||||||||||||||| |||||  |||||||||||| | ||||||| |||||||||| || ||    
T  10400914 attttatacccaagaataaaatttagtaaacttgtaataaacatagacatatacatttc--tatcattttattcccaaaaatcaacaaatataacttgaa 10400817  T
Q  156 acaaaca 162  Q
    |||||||    
T  10400816 acaaaca 10400810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 6280046 - 6279921
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| ||||||||||||||||||||||||||||| |||   ||||||||||||| |    ||||     
T  6280046 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatagacatatacatt--catatcattttattcccgggaatca 6279949  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  6279948 acaattataacttgaaacaaacacaccc 6279921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 25932391 - 25932516
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || |||||||||||||||||||||| |||||| |||||  |||||||||||| |||  ||||     
T  25932391 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattcctaggaatca 25932488  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  25932489 acaattataacttgaaacaaacacaccc 25932516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 30415852 - 30415977
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| ||||||||||||||  || |||||||||| ||||||||||||||||||| ||||||||||||| |  ||||||||||||      ||||     
T  30415852 ttctattccaaagaacattttatatttgggaataaaatttagtaaacttgtaacaaacacagacatatatattcc--tatcattttattatcgggaatca 30415949  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||||||||| || ||||||||||||||    
T  30415950 acaaatataacttgaaacaaacacaccc 30415977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 45747921 - 45747796
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||||| |||||||||||||| | |||||||||| |||||||||||||||||||||| |||||| ||| |  |||||||||||| |    ||||     
T  45747921 ttctattcctaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatacattcc--tatcattttattcccgggaatca 45747824  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  45747823 acaattataacttgaaacaaacacaccc 45747796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 47670312 - 47670436
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || |||||||||||||||||||||| |||||| |||||  |||||||||||||| |  ||||     
T  47670312 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatttc--tatcattttatttccaggaatca 47670409  T
Q  140 acaaatataatttaaaacaaacacacc 166  Q
    |||| ||||| || |||||||||||||    
T  47670410 acaattataacttgaaacaaacacacc 47670436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 13230114 - 13230037
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||| |||||| ||||||||    
T  13230114 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatacatttctat 13230037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 32953473 - 32953550
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||| |||| |||||| ||| ||||    
T  32953473 ttctattcctaggaacattttatacccgagaataaaatttagtaaacttgtaacaaagataggcatatacattcctat 32953550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 39730418 - 39730341
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | |||||||||||||| | |||||||||| ||||||||||||||||||||||||||||| ||| ||||    
T  39730418 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatagacatatacattcctat 39730341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 48519016 - 48518939
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | |||||||||||||||| |||||||||| |||||||||||||||||||||| |||||| ||| ||||    
T  48519016 ttctattcccaggaacattttatacctgggaataaaatttagtaaacttgtaacaaacataggcatatacattcctat 48518939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 50673030 - 50672953
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| |  ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||| ||||    
T  50673030 ttctattcccagaaacattttatacccgagaataaaatttagtaaacttgtaacaaacatagacatatacattcctat 50672953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 35999636 - 35999761
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || |||||||||||||||||||||| |||||| |||||  |||||||||||| |  | ||||     
T  35999636 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattcccgagaatca 35999733  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  35999734 acaattataacttgaaacaaacacaccc 35999761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 39498775 - 39498900
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || ||||||||||||||||||||| ||||||| |||||  ||||||||||||||    ||||     
T  39498775 ttctattcccatgaacattttataccaaggaataaattttagtaaacttgtaacaaacataaacatatacatttc--tatcattttatttccgggaatca 39498872  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  39498873 acaattataacttgaaacaaacacaccc 39498900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 39502114 - 39502239
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || ||||||||||||||||||||| ||||||| |||||  ||||||||||||||    ||||     
T  39502114 ttctattcccatgaacattttataccaaggaataaattttagtaaacttgtaacaaacataaacatatacatttc--tatcattttatttccgggaatca 39502211  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  39502212 acaattataacttgaaacaaacacaccc 39502239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 41859172 - 41859047
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||||| |||||||||  |||||||||||||||||||||| |||||| ||| |   ||||||||||| |   |||||     
T  41859172 ttctattcccaggaacattttatacctgggaataaaataaagtaaacttgtaacaaacataggcatatacattcc--aatcattttattcccggaaatca 41859075  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  41859074 acaattataacttgaaacaaacacaccc 41859047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 42773910 - 42774023
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatt 151  Q
    |||||||||||||| | |||||||||| |||||||||||||||||||||| |||||| ||| |   ||||||||||| | | ||||| |||| ||||| |    
T  42773910 gaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatacattcc--aatcattttattcccagaaatcaacaattataact 42774007  T
Q  152 taaaacaaacacaccc 167  Q
    | ||||||||||||||    
T  42774008 tgaaacaaacacaccc 42774023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 45596218 - 45596343
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || |||||||||||||||||||||| |||||| |||||  |||||||||||| |  ||||||     
T  45596218 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattcccgaaaatca 45596315  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || |||||||| |||||    
T  45596316 acaattataacttgaaacaaacgcaccc 45596343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 27555377 - 27555485
Alignment:
Q  57 ttttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaa 156  Q
    ||||||||| | |||||||||| ||||||||||||||||||||||||||||| ||| |  |||||||||||| |  | |||| |||| ||||| || |||    
T  27555377 ttttatacccgcgaataaaatttagtaaacttgtaacaaacatagacatatacattcc--tatcattttattcccgagaatcaacaattataacttgaaa 27555474  T
Q  157 caaacacaccc 167  Q
    |||||||||||    
T  27555475 caaacacaccc 27555485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 170
Target Start/End: Complemental strand, 27763024 - 27762896
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||| |||||| ||| |   ||||||||||| |    ||||     
T  27763024 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatacattcc--aatcattttattcccgggaatca 27762927  T
Q  140 acaaatataatttaaaacaaacacacccata 170  Q
    |||| ||||| || |||||||||||||||||    
T  27762926 acaattataacttgaaacaaacacacccata 27762896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 40 - 169
Target Start/End: Original strand, 18405703 - 18405830
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||||| |||||||||||||||   |||||||||  |||||||||||||||||||||| || ||||||  |||||| |||||||     ||||||    
T  18405703 ttctattcctaggaacattttatacctagaaataaaattttgtaaacttgtaacaaacatagatatgtatatt--tatatcgttttattctcggaaatct 18405800  T
Q  140 acaaatataatttaaaacaaacacacccat 169  Q
       ||||||| |||||||||||||||||||    
T  18405801 ctgaatataacttaaaacaaacacacccat 18405830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 40 - 165
Target Start/End: Original strand, 18931703 - 18931826
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||  | |||||||||| ||||||||| || |||||||||||||||| ||| |  |||||||||||| | | |||||     
T  18931703 ttctattcccaggaacattttatacacgggaataaaatttagtaaacttataccaaacatagacatatacattcc--tatcattttattcccagaaatca 18931800  T
Q  140 acaaatataatttaaaacaaacacac 165  Q
    |||| ||||| || ||||||||||||    
T  18931801 acaattataacttgaaacaaacacac 18931826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 8322195 - 8322272
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| ||||| ||||||||||   ||||||| || ||||||||||||||||||||||||||||| ||||||||    
T  8322195 ttctattcccaagaatattttataccaaggaataaattttagtaaacttgtaacaaacatagacatatacatttctat 8322272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 40435850 - 40435975
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || |||||||||||||||||||||| |||||| |||||  |||||||||||| |    ||||     
T  40435850 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattcccgggaatca 40435947  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  40435948 acaattataacttgaaacaaacacaccc 40435975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 43723214 - 43723339
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || |||||||||||||||||||||| |||||| |||||  |||||||||||||     ||||     
T  43723214 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattttcgggaatca 43723311  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  43723312 acaattataacttgaaacaaacacaccc 43723339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 48879275 - 48879400
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || |||||||||||||||||||||| |||||| |||||  |||||||||||| |    ||||     
T  48879275 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattcccgggaatca 48879372  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  48879373 acaattataacttgaaacaaacacaccc 48879400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 55968125 - 55968057
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatata 108  Q
    ||||||||| | |||||||||||||| | |||||||||| ||||||||||||||||||| |||||||||    
T  55968125 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacagagacatata 55968057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 12276026 - 12275959
Alignment:
Q  50 aagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    |||||||||||||| |   |||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  12276026 aagaacattttatatccaggaataaaatttagtaaacttgtaacaaacataaacatatatatttctat 12275959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 80 - 166
Target Start/End: Original strand, 36860108 - 36860191
Alignment:
Q  80 agtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaacaaacacacc 166  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||||  | ||||| |||||||||| || |||||||||||||    
T  36860108 agtaaacttgtaacaaacataaacatatatatt--tatatcattttattt-aagaaatcaacaaatataacttgaaacaaacacacc 36860191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 34238079 - 34238006
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatattt 113  Q
    ||||||||| ||||||||||||||||   ||||||| || |||||||||||||||||||||| |||||| ||||    
T  34238079 ttctattcccaagaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacattt 34238006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 112
Target Start/End: Original strand, 936076 - 936148
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatt 112  Q
    ||||||||| | ||||||||||| || | |||||||||| ||||||||||||||||||||||  |||||||||    
T  936076 ttctattcccaggaacattttatgcccgggaataaaatttagtaaacttgtaacaaacatagggatatatatt 936148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 167
Target Start/End: Original strand, 23686753 - 23686862
Alignment:
Q  56 attttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaa 155  Q
    ||||||||||   ||||||| || |||||||||||||||||||||| ||||||||||||  |||||||||||| |    |||| |||| ||||| || ||    
T  23686753 attttataccaaggaataaattttagtaaacttgtaacaaacataggcatatatatttc--tatcattttattcccgggaatcaacaattataacttgaa 23686850  T
Q  156 acaaacacaccc 167  Q
    ||||||||||||    
T  23686851 acaaacacaccc 23686862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 166
Target Start/End: Complemental strand, 31937991 - 31937870
Alignment:
Q  43 tattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctaca 142  Q
    |||||| ||||||||||||||  || |||||||||| | ||||||| |||||||||||  ||| ||| ||  | ||| |||||||||  |||||||||||    
T  31937991 tattcccaagaacattttatatttgggaataaaatttaataaacttctaacaaacatatgcatgtatgtt--tttatgattttattttcaaaaatctaca 31937894  T
Q  143 aatataatttaaaacaaacacacc 166  Q
    | ||||| || |||||||||||||    
T  31937893 attataacttgaaacaaacacacc 31937870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 39835432 - 39835307
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || |||||||||||||||||||||  |||||| |||  |||||||||||||| |    ||||     
T  39835432 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacatatgcatatacatt--tatatcattttattcccgggaatca 39835335  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  39835334 acaattataacttgaaacaaacacaccc 39835307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 51968727 - 51968852
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||| ||||||||   ||||||||||| || ||||||||||||||||||| |||  |||||||  |||| ||||||| | | |||| |    
T  51968727 ttctattcccaggaacgttttatactcaagaataaaatttagcaaacttgtaacaaacataggcatgcatatttc--tatctttttattcccagaaattt 51968824  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    || ||||||| || ||||||||||||||    
T  51968825 acgaatataacttgaaacaaacacaccc 51968852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 118
Target Start/End: Complemental strand, 18405356 - 18405281
Alignment:
Q  43 tattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctata 118  Q
    |||||| | ||||||||||||||   ||||||| || |||||||||||||||||||||| |||||| |||||||||    
T  18405356 tattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatttctata 18405281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 165
Target Start/End: Complemental strand, 41744346 - 41744222
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaa-taaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatc 138  Q
    ||||||||| | ||||||||||||||  |||| |||| || |||||||||||||||||||||| |||||| |||||  |||||||||||| |   |||||    
T  41744346 ttctattcccaggaacattttataccaaagaaataaattttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattcccggaaatc 41744249  T
Q  139 tacaaatataatttaaaacaaacacac 165  Q
     |||| ||||| || ||| ||||||||    
T  41744248 aacaattataacttgaaataaacacac 41744222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 167
Target Start/End: Complemental strand, 9327344 - 9327245
Alignment:
Q  67 gagaataaaattcagtaaacttgtaa-caaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaacaaacacac 165  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||||||||  || |||||||||| ||  |||| |||||||||| || ||| ||| ||||    
T  9327344 gagaataaaatttagtaaacttataaacaaacatagacatatatatttc--taacattttatttttaggaatcaacaaatataacttgaaataaaaacac 9327247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 167
Target Start/End: Complemental strand, 9374103 - 9374004
Alignment:
Q  67 gagaataaaattcagtaaacttgtaa-caaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaacaaacacac 165  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||||||||  || |||||||||| ||  |||| |||||||||| || ||| ||| ||||    
T  9374103 gagaataaaatttagtaaacttataaacaaacatagacatatatatttc--taacattttatttttaggaatcaacaaatataacttgaaataaaaacac 9374006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 25916158 - 25916092
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacata 106  Q
    ||||||||| |  ||||||||||||| | |||||||||| |||||||||||||||||||||| ||||    
T  25916158 ttctattcccagaaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcata 25916092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 7258913 - 7259036
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaa-aaatc 138  Q
    ||||||||| | |||||||||||||  |  ||||||||| ||||||||||||||||||| |||||| |||||   | |||||||||| ||||||  ||||    
T  7258913 ttctattcccaggaacattttatacgcggaaataaaatttagtaaacttgtaacaaacaaagacatgtatat---tctatcatttta-ttctaaggaatc 7259008  T
Q  139 tacaaatataatttaaaacaaacacacc 166  Q
    ||| ||||||| || |||||||| ||||    
T  7259009 taccaatataacttgaaacaaacgcacc 7259036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 161
Target Start/End: Original strand, 44309739 - 44309829
Alignment:
Q  69 gaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaacaaac 161  Q
    |||||||||| ||||| ||||||||||||||||||||  |||||||  |||| ||||||||  | |||||||| ||||||| || ||||||||    
T  44309739 gaataaaatttagtaaccttgtaacaaacatagacatgcatatttc--tatcgttttattttcagaaatctacgaatataacttgaaacaaac 44309829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 117
Target Start/End: Original strand, 38414170 - 38414233
Alignment:
Q  53 aacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    |||||||||||| || |||||||||| ||||||||| | |||||||||||||| |||||||||||    
T  38414170 aacattttatacatg-gaataaaatttagtaaacttattacaaacatagacatgtatatttctat 38414233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 106
Target Start/End: Original strand, 27942687 - 27942753
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacata 106  Q
    ||||||||| | |||||||||||||| | |||||||||| ||||||||| ||| ||||||| |||||    
T  27942687 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttataataaacataaacata 27942753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 108
Target Start/End: Complemental strand, 47426336 - 47426298
Alignment:
Q  70 aataaaattcagtaaacttgtaacaaacatagacatata 108  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  47426336 aataaaatttagtaaacttgtaacaaacatagacatata 47426298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 22654602 - 22654525
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||  || |||||||| |||| |||||||||| | ||| ||||||||| |||||||| ||| |||||||||||    
T  22654602 ttctattcgcaataacattttttacccgagaataaaaattagttaacttgtaataaacataggcatgtatatttctat 22654525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 54478495 - 54478605
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttcta----tatcattttatttctaaaa 135  Q
    ||||||| | || |||||||||||||   |||| ||||| ||||||||| ||||||||||| || | ||||||||||    |||||||||||| | ||||    
T  54478495 ttctatttccaataacattttatacccatgaatgaaatttagtaaacttataacaaacatacacgtgtatatttctatttctatcattttattcccaaaa 54478594  T
Q  136 atctacaaata 146  Q
    |||||| ||||    
T  54478595 atctacgaata 54478605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 149
Target Start/End: Complemental strand, 9382381 - 9382300
Alignment:
Q  67 gagaataaaattcagtaaacttgtaa-caaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataa 149  Q
    |||||||||||| |||||| || ||| ||||||||||||||||||||||  || |||||||||| ||  |||| ||||||||||    
T  9382381 gagaataaaatttagtaaatttataaacaaacatagacatatatatttc--taacattttatttttaggaatcaacaaatataa 9382300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 18094200 - 18094324
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    |||||||||||  ||||||||||||| || ||||||||| ||||||||| || ||||||||   |  ||||||||  |||||||||||||  | ||||||    
T  18094200 ttctattcctagaaacattttatacccgaaaataaaatt-agtaaacttctagcaaacataagaaggtatatttc--tatcattttattttcagaaatct 18094296  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    || ||||| | || |||||||| |||||    
T  18094297 acgaatattacttgaaacaaacccaccc 18094324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 36858489 - 36858441
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacata 100  Q
    |||||||||||||| | | |||||||| |||||||||||||||||||||    
T  36858489 gaacattttatacccgggcataaaatttagtaaacttgtaacaaacata 36858441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 107
Target Start/End: Original strand, 52469648 - 52469715
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatat 107  Q
    |||||||||||  ||||||||||  | |  ||||||||| | ||||||||||||||||||||||||||    
T  52469648 ttctattcctagaaacattttattgccggaaataaaatttaataaacttgtaacaaacatagacatat 52469715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 26165322 - 26165379
Alignment:
Q  48 ctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacat 105  Q
    ||||||||||||||||     |||||||||| ||||||||||||||||||||| ||||    
T  26165322 ctaagaacattttatattcatgaataaaatttagtaaacttgtaacaaacataaacat 26165379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 24805193 - 24805137
Alignment:
Q  57 ttttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatattt 113  Q
    |||||| || || ||||||||| |||||| |||||||||||||| |||| |||||||    
T  24805193 ttttattcccgaaaataaaatttagtaaatttgtaacaaacataaacatgtatattt 24805137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 7317348 - 7317444
Alignment:
Q  69 gaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaacaaacacaccc 167  Q
    |||||||||| |||||||||||||||||||||| |||||||||| |  ||||||||||||| | |||||| |||||||||| || ||||||||||||||    
T  7317348 gaataaaatttagtaaacttgtaacaaacataggcatatatattcc--tatcattttatttttgaaaatcaacaaatataacttgaaacaaacacaccc 7317444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 1554479 - 1554354
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| ||||||||||||||||||||||||||||| ||| |  |||||||||||| |    ||||     
T  1554479 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatagacatatacattcc--tatcattttattcccgggaatca 1554382  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  1554381 acaattataacttgaaacaaacacaccc 1554354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 18726744 - 18726619
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||||| |||||||||| |||||||||||||||||||||| |||||| ||| |  |||||||||||| |    ||||     
T  18726744 ttctattcccaggaacattttatacctgggaataaaatttagtaaacttgtaacaaacataggcatatacattcc--tatcattttattcccgggaatca 18726647  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  18726646 acaattataacttgaaacaaacacaccc 18726619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 56 - 163
Target Start/End: Complemental strand, 29421598 - 29421493
Alignment:
Q  56 attttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaa 155  Q
    |||||||||| |||||||||||| | ||||||||||||||||||| |||||||||||||  ||||||||||||   |  |||| ||||||||||||| ||    
T  29421598 attttatacccgagaataaaatttaataaacttgtaacaaacataaacatatatatttc--tatcattttattctcatgaatcaacaaatataatttgaa 29421501  T
Q  156 acaaacac 163  Q
    ||||||||    
T  29421500 acaaacac 29421493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 35394347 - 35394411
Alignment:
Q  51 agaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttct 115  Q
    ||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||    
T  35394347 agaacattttatacccgggaataaaatttagtaaacttgtaacaaacatagacatatatatttct 35394411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 38132862 - 38132737
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || ||||||||||||||||||||||||||||| |||||  |||||||||||| |  | ||||     
T  38132862 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacatagacatatacatttc--tatcattttattcccgagaatca 38132765  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  38132764 acaattataacttgaaacaaacacaccc 38132737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 40 - 166
Target Start/End: Complemental strand, 33444749 - 33444627
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |||||||||||||||| | |||||||||| ||||| |||||||||||||||||||||||||||  | ||||||||||||   |  ||||     
T  33444749 ttctattcccaagaacattttataccgg-gaataaaatttagtaa-cttgtaacaaacatagacatatatatt--tttatcattttattctcaggaatca 33444654  T
Q  140 acaaatataatttaaaacaaacacacc 166  Q
    |||||||||| || |||||||||||||    
T  33444653 acaaatataacttgaaacaaacacacc 33444627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 165
Target Start/End: Complemental strand, 21137244 - 21137134
Alignment:
Q  53 aacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataattt 152  Q
    ||||||||||||| | |||||||||| |||||||||||||||||||||| |||||||||||||||   ||||||||   |  |||| |||||||||| ||    
T  21137244 aacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatatatttctatt--attttattctcaggaatcaacaaatataactt 21137147  T
Q  153 aaaacaaacacac 165  Q
     ||||||||||||    
T  21137146 caaacaaacacac 21137134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 164
Target Start/End: Complemental strand, 26602062 - 26601941
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |||||||||||||||| | |||||||||| |||||||||||||||||||||| |||||| ||| |  |||||||||||| |    ||||     
T  26602062 ttctattcccaagaacattttataccag-gaataaaatttagtaaacttgtaacaaacataggcatatacattcc--tatcattttattcccgggaatca 26601966  T
Q  140 acaaatataatttaaaacaaacaca 164  Q
    |||| |||||||| |||||||||||    
T  26601965 acaattataatttgaaacaaacaca 26601941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 172
Target Start/End: Complemental strand, 32661058 - 32660928
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| | |||||||||||||||||||| |||||| ||| |  |||||||||||| | |  ||||     
T  32661058 ttctattcccaggaacattttatacccgggaataaaatttaataaacttgtaacaaacataggcatatacattcc--tatcattttattcccaggaatca 32660961  T
Q  140 acaaatataatttaaaacaaacacacccataat 172  Q
    |||| ||||| || |||||||||||||| ||||    
T  32660960 acaattataacttgaaacaaacacacccttaat 32660928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 16313632 - 16313507
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| ||||||||||||||||||||||  ||||| ||| |  |||||||||||| |   |||||     
T  16313632 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggtatatacattcc--tatcattttattcccggaaatca 16313535  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  16313534 acaattataacttgaaacaaacacaccc 16313507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 3049955 - 3050032
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||| |||||| ||| ||||    
T  3049955 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatacattcctat 3050032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 168
Target Start/End: Complemental strand, 10896342 - 10896216
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || |||||| ||||||||||||||| |||||| |||||  |||||||||||| ||   ||||     
T  10896342 ttctattcccaggaacattttataccaaggaataaattttagtaaatttgtaacaaacataggcatatacatttc--tatcattttattcctgggaatca 10896245  T
Q  140 acaaatataatttaaaacaaacacaccca 168  Q
    |||| ||||| || |||||||||||||||    
T  10896244 acaattataacttgaaacaaacacaccca 10896216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 12710591 - 12710716
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || |||||||||||||||||||||| |||||| |||||  |||||||||||| |    ||||     
T  12710591 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattcccgggaatca 12710688  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  12710689 acaattataacttgaaacaaacacaccc 12710716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 35818549 - 35818481
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatata 108  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||| ||||||    
T  35818549 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatata 35818481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 38364027 - 38364095
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatata 108  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||| ||||||    
T  38364027 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatata 38364095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 146
Target Start/End: Original strand, 44161730 - 44161806
Alignment:
Q  70 aataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaata 146  Q
    ||||||||| |||||| || ||| ||||||| |||||||||||| | |||||||||||||| |||||||||||||||    
T  44161730 aataaaatttagtaaatttataataaacataaacatatatatttttttatcattttatttcaaaaaatctacaaata 44161806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 42 - 172
Target Start/End: Complemental strand, 16219066 - 16218938
Alignment:
Q  42 ctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctac 141  Q
    |||||||| ||||| ||||| |||   |||||||||  |||||||||||||||||||||| |||| |||||||  |||| ||||||| | | ||| ||||    
T  16219066 ctattcctgagaacgttttaaaccccggaataaaatctagtaaacttgtaacaaacataggcatacatatttc--tatcgttttattcccagaaaactac 16218969  T
Q  142 aaatataatttaaaacaaacacacccataat 172  Q
     |||||||||| |||||||| ||||| ||||    
T  16218968 gaatataatttgaaacaaacgcacccttaat 16218938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 165
Target Start/End: Complemental strand, 5020605 - 5020492
Alignment:
Q  53 aacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttct-atatcattttatttctaaaaatctacaaatataatt 151  Q
    ||||||||||||| |||| |||| || ||||||||||||| |||||||  |||||||||| ||  |||||||||||| | |  |||| |||||||||| |    
T  5020605 aacattttatacccgagagtaaactttagtaaacttgtaagaaacatatgcatatatattcctcctatcattttattcccatgaatcaacaaatataact 5020506  T
Q  152 taaaacaaacacac 165  Q
    | ||||||||||||    
T  5020505 tgaaacaaacacac 5020492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 18298058 - 18298119
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatag 101  Q
    ||||||||| | |||||||||||||| | |||||||||| ||||||||||||||||||||||    
T  18298058 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatag 18298119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 37392671 - 37392594
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | |||||||||||||| | |||||||||| | |||||||||||||||||||| |||||| ||| ||||    
T  37392671 ttctattcccaggaacattttatacccgggaataaaatttaataaacttgtaacaaacataggcatatacattcctat 37392594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 25837857 - 25837982
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | ||||||||||  ||||||||||||||||||||| ||| || ||| |  |||||||||||| |    ||||     
T  25837857 ttctattcccaggaacattttatacccgggaataaaattttgtaaacttgtaacaaacataggcatgtacattcc--tatcattttattcccgggaatca 25837954  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  25837955 acaattataacttgaaacaaacacaccc 25837982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 26062090 - 26062215
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | | ||||||||||||   ||||||| || ||||||||||||||||||||||  ||||| |||||  |||||||||||| |  | ||||     
T  26062090 ttctattcccagggacattttataccaaggaataaattttagtaaacttgtaacaaacataggaatatacatttc--tatcattttattcccgagaatca 26062187  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  26062188 acaattataacttgaaacaaacacaccc 26062215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 41228839 - 41228771
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatata 108  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||| ||| ||||||    
T  41228839 ttctattccaaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacgtaggcatata 41228771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 42755813 - 42755937
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||    ||||||| || |||||||||||||| ||||||| |||||| |||||  |||||||||||| | |  ||||     
T  42755813 ttctattcccaggaacattttatacaaaggaataaattttagtaaacttgtaactaacataggcatatacatttc--tatcattttattcccaggaatca 42755910  T
Q  140 acaaatataatttaaaacaaacacacc 166  Q
    |||| ||||| || |||||||||||||    
T  42755911 acaattataacttgaaacaaacacacc 42755937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 165
Target Start/End: Complemental strand, 14764044 - 14763933
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatt 151  Q
    |||||||||||||| | |||||||||| |||||||||| ||||||||||  ||| ||||||||  ||||||||||||   | ||| |||  ||||||| |    
T  14764044 gaacattttatacccgtgaataaaatttagtaaacttgaaacaaacatatgcatgtatatttc--tatcattttattcacataaaactatgaatataact 14763947  T
Q  152 taaaacaaacacac 165  Q
    | ||||||||||||    
T  14763946 tgaaacaaacacac 14763933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 161
Target Start/End: Original strand, 38437412 - 38437519
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatt 151  Q
    |||| ||||||||| || |||||||||  |||||||||||||||||||||| |||| |||| |  |||| ||||||||  |  ||| ||||||||||| |    
T  38437412 gaacgttttatacccgaaaataaaattttgtaaacttgtaacaaacatagatatatgtattcc--tatcgttttattttcaggaatatacaaatataact 38437509  T
Q  152 taaaacaaac 161  Q
    ||||||||||    
T  38437510 taaaacaaac 38437519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 163
Target Start/End: Original strand, 7931197 - 7931306
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatt 151  Q
    ||||||||||||||   ||||||| || ||||||||| ||||||||||| ||||||| |||||  |||||||||||| | |  |||| |||| ||||| |    
T  7931197 gaacattttataccaaggaataaattttagtaaacttataacaaacatatacatatacatttc--tatcattttattcccaggaatcaacaattataact 7931294  T
Q  152 taaaacaaacac 163  Q
    | ||||||||||    
T  7931295 tgaaacaaacac 7931306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 34672292 - 34672405
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatt 151  Q
    |||||||||||| |||||||||||||| | ||||||||||| |||  ||  ||||||||||  | |||||||||||||  |  |||| ||||||| || |    
T  34672292 gaacattttatatctgagaataaaatttattaaacttgtaataaatgtaagcatatatatt--tttatcattttattttcaggaatcaacaaatacaact 34672389  T
Q  152 taaaacaaacacaccc 167  Q
    | ||||||||||||||    
T  34672390 tcaaacaaacacaccc 34672405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 40197201 - 40197076
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |  ||||||||||| |  |||||||| || ||||||||| ||||||||||| ||||||| |||||  ||||||||||||||    ||||     
T  40197201 ttctattcccagaaacattttatatcaaagaataaattttagtaaacttataacaaacataaacatatacatttc--tatcattttatttccgggaatca 40197104  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||| ||||    
T  40197103 acaattataacttgaaacaaacataccc 40197076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 43872088 - 43871971
Alignment:
Q  43 tattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctaca 142  Q
    |||||| | |||||||||||||| | |||||||||| |  ||||||||||||||||||| ||| ||| ||  | ||| |||||||||| || |||||| |    
T  43872088 tattcccaggaacattttatacccgggaataaaatttaacaaacttgtaacaaacataggcatgtatgtt--tttatgattttatttccaagaatctata 43871991  T
Q  143 aatataatttaaaacaaaca 162  Q
    | ||||| || |||||||||    
T  43871990 attataacttgaaacaaaca 43871971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 161
Target Start/End: Original strand, 15226926 - 15227029
Alignment:
Q  56 attttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaa 155  Q
    |||||||||| |  ||||||||| ||||||||||||||||||||| |||||| ||||  ||||| ||||||||   |  ||||||| ||||||| || ||    
T  15226926 attttatacccggaaataaaatttagtaaacttgtaacaaacataaacatatgtatt--tatatgattttattcagaggaatctacgaatataacttgaa 15227023  T
Q  156 acaaac 161  Q
    ||||||    
T  15227024 acaaac 15227029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 160
Target Start/End: Original strand, 41432687 - 41432804
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |  ||| ||||||||| | |||||||||| ||||||||||||||||||||| |||| | |||| |  |||||||||||| | |  ||||     
T  41432687 ttctattcccataaacgttttataccgg-gaataaaatttagtaaacttgtaacaaacataaacatgtgtattcc--tatcattttattcccaggaatcc 41432783  T
Q  140 acaaatataatttaaaacaaa 160  Q
    || ||||||| ||||||||||    
T  41432784 acgaatataacttaaaacaaa 41432804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 19160863 - 19160793
Alignment:
Q  43 tattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatattt 113  Q
    |||||| ||||| |||||||||  | |||| ||||| ||||||||||||||||||||   |||||||||||    
T  19160863 tattcccaagaatattttatacacgggaatgaaatttagtaaacttgtaacaaacatctgcatatatattt 19160793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 54; Significance: 5e-22; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 119266 - 119392
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatt-tctaaaaatc 138  Q
    ||||||||| | |||||||||||||    |||||||||| |||||||||||||||||||||||||| ||||||||  ||||||| ||||  | |||||||    
T  119266 ttctattcccaggaacattttatactcatgaataaaatttagtaaacttgtaacaaacatagacatgtatatttc--tatcattgtattcccaaaaaatc 119363  T
Q  139 tacaaatataatttaaaacaaacacaccc 167  Q
    ||||||||||||   ||||||||||||||    
T  119364 tacaaatataatcagaaacaaacacaccc 119392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 143559 - 143636
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | |||||||||||| | | |||||||||| |||||||||||||||||| || ||||||||||||||||    
T  143559 ttctattcccaggaacattttatatccgggaataaaatttagtaaacttgtaacaaacgtatacatatatatttctat 143636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 201871 - 201996
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||| |||||||||| |  ||||||||| |||||||||||||||||||||| |||||| ||| |  |||||||||||| |    ||||     
T  201871 ttctattcccaggaatattttatacccggaaataaaatttagtaaacttgtaacaaacataggcatatacattcc--tatcattttattcccgggaatca 201968  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  201969 acaattataacttgaaacaaacacaccc 201996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 40 - 162
Target Start/End: Complemental strand, 29077 - 28957
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||| |||||| ||| |  |||||||||||| |  ||||||     
T  29077 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatacattcc--tatcattttattcccgaaaatca 28980  T
Q  140 acaaatataatttaaaacaaaca 162  Q
    |||| ||||| || |||||||||    
T  28979 acaattataacttgaaacaaaca 28957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 169
Target Start/End: Complemental strand, 12228381 - 12228254
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |  |||||||| |||| |||||||||||| ||||||||||||| |||||||| ||||||||||||  ||||||||||||   |  |||      
T  12228381 ttctattcccagaaacattttgtacccgagaataaaatttagtaaacttgtaataaacataggcatatatatttc--tatcattttattcgcaggaatta 12228284  T
Q  140 acaaatataatttaaaacaaacacacccat 169  Q
    |||| |||| ||||||||||||||||||||    
T  12228283 acaactatattttaaaacaaacacacccat 12228254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 41 - 167
Target Start/End: Complemental strand, 6832079 - 6831957
Alignment:
Q  41 tctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatcta 140  Q
    |||||||| | ||| |||||||||||| |||||||||| |||||||||||||||||||||||||| | | |||   | | |||||||||| |  ||||||    
T  6832079 tctattcccaggaatattttatacctg-gaataaaatttagtaaacttgtaacaaacatagacatgtgttttt---tgtgattttatttccaggaatcta 6831984  T
Q  141 caaatataatttaaaacaaacacaccc 167  Q
    ||||||||| || ||||||||||||||    
T  6831983 caaatataagttgaaacaaacacaccc 6831957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 26848968 - 26849093
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||| |||||| ||| |  |||||||||||| |    ||||     
T  26848968 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatacattcc--tatcattttattcccgggaatca 26849065  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  26849066 acaattataacttgaaacaaacacaccc 26849093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 52 - 167
Target Start/End: Complemental strand, 31436036 - 31435923
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatt 151  Q
    ||||||||||||||   |||||||||| |||||||||||||||||||||| |||||| |||||  ||||||||||||   |  |||| |||||||||| |    
T  31436036 gaacattttatacccaggaataaaatttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattctcaggaatcaacaaatataact 31435939  T
Q  152 taaaacaaacacaccc 167  Q
    | ||||||||||||||    
T  31435938 tgaaacaaacacaccc 31435923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 31611110 - 31611042
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatata 108  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||||||||||    
T  31611110 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacatagacatata 31611042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 40908211 - 40908336
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||| |||||| ||| |  |||||||||||| |    ||||     
T  40908211 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatacattcc--tatcattttattcccgggaatca 40908308  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  40908309 acaattataacttgaaacaaacacaccc 40908336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 18460885 - 18460956
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatat 111  Q
    ||||||||| |  |||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||    
T  18460885 ttctattcccagaaacattttataccaaagaataaaatttagtaaacttgtaacaaacatagacatatatat 18460956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 6231626 - 6231549
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||| | |||||||||||||| | |||||||||| |||||||||||||||||||||| |||||| ||| ||||    
T  6231626 ttctattccaaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacataggcatatacattcctat 6231549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 167
Target Start/End: Complemental strand, 28124558 - 28124436
Alignment:
Q  43 tattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctaca 142  Q
    |||||| | |||||||||||||| | |||||||||| ||||||||| |||||||||||| |||||| ||| |  |||||||||||| |  | |||| |||    
T  28124558 tattccgaggaacattttatacccgggaataaaatttagtaaacttataacaaacataggcatatacattcc--tatcattttattcccgagaatcaaca 28124461  T
Q  143 aatataatttaaaacaaacacaccc 167  Q
    | ||||| || ||||||||||||||    
T  28124460 attataacttgaaacaaacacaccc 28124436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 164
Target Start/End: Complemental strand, 48339882 - 48339760
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || |||||||||||||||||||||| |||||| |||  |||||||||||||| |   |||||     
T  48339882 ttctattcccatgaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatt--tatatcattttattcccggaaatca 48339785  T
Q  140 acaaatataatttaaaacaaacaca 164  Q
    |||| ||||| || |||||||||||    
T  48339784 acaattataacttgaaacaaacaca 48339760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 11239245 - 11239120
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || |||||||||||||||||||||| |||||| |||||  |||||||||||| |    ||||     
T  11239245 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattcccgggaatca 11239148  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  11239147 acaattataacttgaaacaaacacaccc 11239120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 20297739 - 20297864
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || | |||||||||||||||||||| |||||| |||||  ||||||||||||||    ||||     
T  20297739 ttctattcccaggaacattttataccaaggaataaattttaataaacttgtaacaaacataggcatatacatttc--tatcattttatttccgggaatca 20297836  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  20297837 acaattataacttgaaacaaacacaccc 20297864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 24784182 - 24784276
Alignment:
Q  69 gaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaacaaacacaccc 167  Q
    |||||||||| ||||||||||||||||||   ||||||| ||||| ||||  |||||||| | |||||||||||| ||||| |||||||||||||||||    
T  24784182 gaataaaatttagtaaacttgtaacaaact--gacatatgtatttttata--attttattccaaaaaatctacaattataacttaaaacaaacacaccc 24784276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 165
Target Start/End: Original strand, 1099144 - 1099267
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | ||||||||||||||   ||||||| || ||||||||||||||||||||||  ||||| |||||  |||||||||||| |    ||||     
T  1099144 ttctattcccaggaacattttataccaaggaataaattttagtaaacttgtaacaaacatagggatatacatttc--tatcattttattcccgggaatca 1099241  T
Q  140 acaaatataatttaaaacaaacacac 165  Q
    |||| ||||| |||||||||||||||    
T  1099242 acaattataacttaaaacaaacacac 1099267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 167
Target Start/End: Complemental strand, 20414580 - 20414465
Alignment:
Q  50 aagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataa 149  Q
    |||||||||||||||| | |||||||||| |||||| || |||||||||||| |||||| ||| |   ||||||||||| | | ||||| |||| |||||    
T  20414580 aagaacattttatacccgggaataaaatttagtaaatttataacaaacataggcatatacattcc--aatcattttattcccagaaatcaacaattataa 20414483  T
Q  150 tttaaaacaaacacaccc 167  Q
     || ||||||||||||||    
T  20414482 cttgaaacaaacacaccc 20414465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 167
Target Start/End: Complemental strand, 43132268 - 43132157
Alignment:
Q  54 acattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataattta 153  Q
    ||||||||||| ||| ||||||||| | |||||||||||||||||||| |||||||||| |  ||| ||||||||    | |||| |||||||||| ||     
T  43132268 acattttatacatgaaaataaaatttaataaacttgtaacaaacataggcatatatattcc--tattattttattctcgagaatcaacaaatataacttg 43132171  T
Q  154 aaacaaacacaccc 167  Q
    ||||||||||||||    
T  43132170 aaacaaacacaccc 43132157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 169
Target Start/End: Complemental strand, 47114970 - 47114855
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatt 151  Q
    |||||||||||||  | |||||||||| |||||||||||||||||||||| |||||| ||| |   ||||||||||| | |  |||| |||| ||||| |    
T  47114970 gaacattttatactcgggaataaaatttagtaaacttgtaacaaacataggcatatacattcc--aatcattttattcccaggaatcaacaattataact 47114873  T
Q  152 taaaacaaacacacccat 169  Q
    | ||||||||||||||||    
T  47114872 tgaaacaaacacacccat 47114855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 46359898 - 46359959
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatag 101  Q
    ||||||||  |||||||||||||||| | |||||||||| ||||||||||||||||||||||    
T  46359898 ttctattcacaagaacattttatacccgggaataaaatttagtaaacttgtaacaaacatag 46359959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 8476433 - 8476365
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatata 108  Q
    ||||||||| | |||||||||||||| | |||||||||| ||||||||||||||||||| || ||||||    
T  8476433 ttctattcccaggaacattttatacccgggaataaaatttagtaaacttgtaacaaacacaggcatata 8476365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 28139845 - 28139720
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |||||| ||||||| | || ||||||||| | ||| |||||||||||||||  ||| ||||||||  |||| ||||||| |||| ||| |    
T  28139845 ttctattcccaagaacgttttatatccgaaaataaaatttactaatcttgtaacaaacataagcatgtatatttc--tatctttttattcctaagaatat 28139748  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    || ||||||| || |||||||| |||||    
T  28139747 acgaatataacttgaaacaaacgcaccc 28139720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 167
Target Start/End: Original strand, 44952254 - 44952379
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |  |||||||||||||   ||||||| || |||||||||||||||||||||| |||||| |||||  |||||||||||| |    ||||     
T  44952254 ttctattcccagaaacattttataccaaggaataaattttagtaaacttgtaacaaacataggcatatacatttc--tatcattttattcccgggaatca 44952351  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    |||| ||||| || ||||||||||||||    
T  44952352 acaattataacttgaaacaaacacaccc 44952379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 159
Target Start/End: Complemental strand, 53165850 - 53165733
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |  ||||||||||| | | |||||||||| |||||||||||||||||||||  |||||||||| |  ||||||||||||| |   ||||     
T  53165850 ttctattcccagaaacattttatatccgggaataaaatttagtaaacttgtaacaaacataagcatatatattcc--tatcattttatttatgggaatca 53165753  T
Q  140 acaaatataatttaaaacaa 159  Q
    |||||||||| || ||||||    
T  53165752 acaaatataacttgaaacaa 53165733  T

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Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 27093961 - 27094035
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttc 114  Q
    ||||||||| |  ||||||||||||| |||||||| ||  ||||||||| |||||||||||| ||||||||||||    
T  27093961 ttctattcccataaacattttatacccgagaataagatatagtaaacttataacaaacataggcatatatatttc 27094035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 165
Target Start/End: Original strand, 27823232 - 27823343
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatt 151  Q
    |||| ||||||||  | |||||||||| ||||||||| || ||||||||||||| ||||||||  |||||||||||| | | |||| ||  ||||||| |    
T  27823232 gaacgttttatactcgggaataaaatttagtaaacttatagcaaacatagacatttatatttc--tatcattttattcccataaatttatgaatataact 27823329  T
Q  152 taaaacaaacacac 165  Q
    | ||||||||||||    
T  27823330 tgaaacaaacacac 27823343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 164
Target Start/End: Original strand, 32071420 - 32071508
Alignment:
Q  70 aataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaacaaacaca 164  Q
    ||||||||| ||||||||||||||||||||    |||||||||||  ||||||||||||| || ||||| | |||||||| || |||||||||||    
T  32071420 aataaaatttagtaaacttgtaacaaacat----atatatatttc--tatcattttatttttagaaatcaataaatataacttcaaacaaacaca 32071508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 1247015 - 1246950
Alignment:
Q  52 gaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||||| | || |||||||||| |||||||||||||||||||||  ||||| |||||||||    
T  1247015 gaacattttattcttgggaataaaatttagtaaacttgtaacaaacataagcatatgtatttctat 1246950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 167
Target Start/End: Complemental strand, 2565542 - 2565460
Alignment:
Q  83 aaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaaaacaaacacaccc 167  Q
    |||||||||||||||| ||  |||||||||||  ||| |||||||| |||| |||| |||||||||| ||||||| |||||||||    
T  2565542 aaacttgtaacaaacacaggtatatatatttc--tattattttattcctaagaatcaacaaatataacttaaaacgaacacaccc 2565460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 164
Target Start/End: Complemental strand, 12931065 - 12930945
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| |  ||||||||||||| | |||||||||| |||||||||||||||||||||| |||||  |||  | ||| |||||||| | || |||||    
T  12931065 ttctattcccataaacattttataccgg-gaataaaatttagtaaacttgtaacaaacatagccatatgcatt--tttatgattttattcccaacaatct 12930969  T
Q  140 acaaatataatttaaaacaaacaca 164  Q
    || ||||||| || |||||||||||    
T  12930968 ac-aatataacttgaaacaaacaca 12930945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 24574536 - 24574646
Alignment:
Q  55 cattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatctacaaatataatttaa 154  Q
    |||||||||||   |||||||||| |||||||||||||||||||||| |||||| ||| |  |||||||||||| |    |||| |||| ||||| || |    
T  24574536 cattttatacccaggaataaaatttagtaaacttgtaacaaacataggcatatacattcc--tatcattttattcccgggaatcaacaattataacttga 24574633  T
Q  155 aacaaacacaccc 167  Q
    |||||||||||||    
T  24574634 aacaaacacaccc 24574646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 117
Target Start/End: Complemental strand, 26849240 - 26849203
Alignment:
Q  80 agtaaacttgtaacaaacatagacatatatatttctat 117  Q
    ||||||||||||||||||||||||||||||||||||||    
T  26849240 agtaaacttgtaacaaacatagacatatatatttctat 26849203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 100
Target Start/End: Complemental strand, 9320573 - 9320513
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacata 100  Q
    ||||||||| | ||| |||||||||| | |||||||||| |||||||||||||||||||||    
T  9320573 ttctattcccaggaatattttatacccgggaataaaatttagtaaacttgtaacaaacata 9320513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 28770335 - 28770210
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||| ||| |||| |||||||||   |||| ||||| |||||||||||| |||||||||||||  |||||||  |||| ||||||| | |  |||||    
T  28770335 ttctattgctaggaacgttttatacccaggaatcaaatttagtaaacttgtaccaaacatagacatgcatatttc--tatctttttattcccaggaatct 28770238  T
Q  140 acaaatataatttaaaacaaacacaccc 167  Q
    || ||||||| || ||| ||||||||||    
T  28770237 acgaatataacttgaaagaaacacaccc 28770210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 163
Target Start/End: Complemental strand, 33218038 - 33217917
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||  | |||||||||| | |||| ||||||||||||||| |||||| ||| |  |||||||||||| |   |||||     
T  33218038 ttctattcccaggaacattttatactcgggaataaaatttaataaatttgtaacaaacataggcatatacattcc--tatcattttattcccggaaatca 33217941  T
Q  140 acaaatataatttaaaacaaacac 163  Q
    |||| ||||| || ||||||||||    
T  33217940 acaattataacttgaaacaaacac 33217917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 116
Target Start/End: Complemental strand, 33647799 - 33647752
Alignment:
Q  69 gaataaaattcagtaaacttgtaacaaacatagacatatatatttcta 116  Q
    |||||||||| ||||||||||||||||||||||| || ||||||||||    
T  33647799 gaataaaatttagtaaacttgtaacaaacatagagatgtatatttcta 33647752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 149
Target Start/End: Complemental strand, 10822843 - 10822736
Alignment:
Q  40 ttctattcctaagaacattttatacctgagaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatttctaaaaatct 139  Q
    ||||||||| | |||||||||||||| | ||||    || ||||||||||||||||||||||||||||| | |||  |||||||||||| |   |||||     
T  10822843 ttctattcccaggaacattttatacccgggaattttttttagtaaacttgtaacaaacatagacatatacacttc--tatcattttattcccggaaatca 10822746  T
Q  140 acaaatataa 149  Q
    ||||||||||    
T  10822745 acaaatataa 10822736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 166
Target Start/End: Complemental strand, 38140453 - 38140365
Alignment:
Q  80 agtaaacttgtaacaaacatagacatatatatttctatat--cattttatttctaaaaatctacaaatataatttaaaacaaacacacc 166  Q
    ||||||||| |||||||||| ||||||||||| | |||||  |||||||||   |  ||||||||||||||| |||||| |||||||||    
T  38140453 agtaaacttataacaaacattgacatatatatatatatatatcattttattctcatgaatctacaaatataacttaaaataaacacacc 38140365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 128
Target Start/End: Complemental strand, 39932621 - 39932562
Alignment:
Q  69 gaataaaattcagtaaacttgtaacaaacatagacatatatatttctatatcattttatt 128  Q
    |||||||||| ||||||||| ||||||||||| |||||||||  | | ||||||||||||    
T  39932621 gaataaaatttagtaaacttataacaaacataaacatatatacatttctatcattttatt 39932562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 155
Target Start/End: Complemental strand, 21925559 - 21925475
Alignment:
Q  74 aaattcagtaaacttgtaacaaacatagacatatatatttc---tatatcattttatttctaaaaatctacaaatataatttaaa 155  Q
    ||||||| |||||||||||||||||||  || |||||||||   | ||||||||||||| ||  ||||||| ||||||| |||||    
T  21925559 aaattcaataaacttgtaacaaacataagcaaatatatttcttttctatcattttatttataggaatctacgaatataacttaaa 21925475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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