View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8808_low_5 (Length: 268)
Name: NF8808_low_5
Description: NF8808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8808_low_5 |
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Alignment Details
Target: chr6 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 27 - 251
Target Start/End: Original strand, 29526108 - 29526332
Alignment:
| Q |
27 |
gtttggtgttcatatctgcaggattgtactaagtatggaactcgaccacatcaatcaatttaannnnnnnncaataacatctcttatgaaatcgagccta |
126 |
Q |
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| T |
29526108 |
gtttagtgatcatatctgcaggattgtactaagtatggaacttgaccacatcaatcaatttaattttttttcaataacatctcttatgaaatcgagccta |
29526207 |
T |
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| Q |
127 |
acatcaatgcattaggtgctttcatgatacatttgattttttctcaagtaaattgaactttaactatcacaatgtatacaaattgaattctgtttcaaac |
226 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29526208 |
acatcaatgcattaggtgctttcatgatacatttgattttttctcaagtaaattgaactttaactatcacaatgtatacaaattgaattctgtttcaaac |
29526307 |
T |
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| Q |
227 |
tcagttcctaaactaaacctttaat |
251 |
Q |
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||||||||||||||||||||||||| |
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| T |
29526308 |
tcagttcctaaactaaacctttaat |
29526332 |
T |
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