View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8810A_low_126 (Length: 292)
Name: NF8810A_low_126
Description: NF8810A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8810A_low_126 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 62 - 292
Target Start/End: Complemental strand, 38336167 - 38335937
Alignment:
| Q |
62 |
ttgagaagttagaatatctaattcactctcaaatttctcactaaaaagttcttcccaaaacccttcatcaagttctttattcaatttctcatgagtctca |
161 |
Q |
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| T |
38336167 |
ttgagaagttagaatatctaattcactctcaaatttctcactaaaaagttcttcccaaaacccttcatcaagttctttattcaatttctcattagtctca |
38336068 |
T |
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| Q |
162 |
aatacctcaatctcttcctcatgttctccaccacctcttccaagaccctgcatttccatagccaacatttccaactctgacacttcaaatccatatcgaa |
261 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38336067 |
aatacctcaatctcttcctcatgttctccaccacctcttccaagaccctgcatttccatagccaacatttccaactctgacacttcaaatccatatcgaa |
38335968 |
T |
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| Q |
262 |
caccgctccttccatcgccaccattacttga |
292 |
Q |
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||| |||||||||||||||||||||||||| |
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| T |
38335967 |
cactactccttccatcgccaccattacttga |
38335937 |
T |
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