View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8810A_low_157 (Length: 271)
Name: NF8810A_low_157
Description: NF8810A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8810A_low_157 |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 1129717 - 1129971
Alignment:
| Q |
1 |
gtcacttaagttgccgcactttcaggagtaatggggcgtcacttcgccattagagatggatactcagaacaggttgttaaattttagatcgactattatt |
100 |
Q |
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| T |
1129717 |
gtcactgaatttaccgcactttcaggagtaatggggcgtcactacgcccttagagatggatactcagaacaggttgttaaattttagatcgactattatt |
1129816 |
T |
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| Q |
101 |
ttgtaatcttagaaatcatgacccttgcaatcttagtactgcattctatttggttactagctacttattatcttgcaatctttttcttttccttgtcact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1129817 |
ttgtaatcttagaaatcatgacccttgcaatcttagtactgcattctatttggttactagctacttattatcttgcaatctttttcttttccttgtcact |
1129916 |
T |
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| Q |
201 |
tcaaatattgcagactgcagaggccttgtatgagatcacacttcctagatattct |
255 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
1129917 |
tcaaatattgcagactgcagaggccttgtatgagatcacacttcctagattttct |
1129971 |
T |
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