View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8810A_low_183 (Length: 255)
Name: NF8810A_low_183
Description: NF8810A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8810A_low_183 |
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Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 3 - 245
Target Start/End: Original strand, 31486576 - 31486816
Alignment:
| Q |
3 |
atcatgatggtaatgtggggtagctgtttttgcaatgaaattaaccacgaaaacggagaggttaaatggaaaagcatgttaccaataaaatcattttaat |
102 |
Q |
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| T |
31486576 |
atcatgatgctaatgtggggtagctgtttttgcaatgaaattaaccacgaaaacggagaggttaaatggaaaagcatgttaccaataaaatcattttaat |
31486675 |
T |
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| Q |
103 |
cttgaccattattatttaaccgttcttaaaaagcaaaagcaaatcatgaataatgaatgatagagcattaatacaagttttatgtttgatgtatgtatc- |
201 |
Q |
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| T |
31486676 |
cttgaccattattatttaaccgttcttaaaaagcaaaagcaaatcatgaat----aatgatagagcattaatacaagttttatg-ttgatgcatgtatct |
31486770 |
T |
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| Q |
202 |
--gagtaatcaattctgctcaaaaacaactaaatatgtgagaataa |
245 |
Q |
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| T |
31486771 |
tagagtaatcaattctactaaaaaacaactaaatatgtgagaataa |
31486816 |
T |
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