View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8810A_low_188 (Length: 253)
Name: NF8810A_low_188
Description: NF8810A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8810A_low_188 |
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Alignment Details
Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 24 - 252
Target Start/End: Original strand, 585176 - 585404
Alignment:
| Q |
24 |
tactttaatatgtttgtatggtgcaattttattaatgtgtttttcttatcgtgctttaaatgtgtgatatagcttatattagttgctctccgcaatttta |
123 |
Q |
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| T |
585176 |
tactttaatatgtttgtatggtgcaattttattaatgtgtttttcttatcgtgctttaaatgtgtgatatagcttatattagttgcgctccgcaatttta |
585275 |
T |
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| Q |
124 |
ttctaatgctttaacttgttttcaggtaaatgagcagaaggtccgtaacatgttgtttggtgggcaaagaattatattgaggtttgcccttcctatcaag |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
585276 |
ttctaatgctttaacttgttttcaggtaaatgagcagaaggtccgtaacatgttgtttggtgggcaaagaattatattgaggtttgcccttcctatcaag |
585375 |
T |
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| Q |
224 |
ctatttcatgcttaaatttgtaaatcagg |
252 |
Q |
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| T |
585376 |
ctatttcatgcttaaatttgtaaatcagg |
585404 |
T |
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