View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8810A_low_204 (Length: 250)

Name: NF8810A_low_204
Description: NF8810A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8810A_low_204
NF8810A_low_204
[»] chr3 (53 HSPs)
chr3 (6-232)||(17044853-17045079)
chr3 (6-230)||(41172310-41172534)
chr3 (6-220)||(22306522-22306736)
chr3 (6-232)||(17047013-17047239)
chr3 (6-232)||(17693954-17694180)
chr3 (11-232)||(17538993-17539214)
chr3 (6-232)||(35354489-35354715)
chr3 (31-241)||(49900608-49900818)
chr3 (13-232)||(11259318-11259537)
chr3 (6-232)||(40812720-40812942)
chr3 (40-232)||(17518846-17519038)
chr3 (40-232)||(17533708-17533900)
chr3 (68-232)||(40807883-40808047)
chr3 (68-232)||(44274305-44274469)
chr3 (6-232)||(15931447-15931672)
chr3 (6-216)||(14508749-14508960)
chr3 (82-232)||(50348041-50348191)
chr3 (68-232)||(10563596-10563759)
chr3 (71-218)||(10311428-10311575)
chr3 (6-130)||(17541423-17541547)
chr3 (92-184)||(35064566-35064658)
chr3 (52-189)||(11563654-11563792)
chr3 (68-187)||(19568209-19568328)
chr3 (68-187)||(33565018-33565138)
chr3 (68-189)||(42323972-42324094)
chr3 (17-189)||(45530553-45530725)
chr3 (68-213)||(9510917-9511062)
chr3 (68-213)||(9518892-9519037)
chr3 (68-167)||(13185846-13185946)
chr3 (11-119)||(50350760-50350867)
chr3 (68-167)||(16050879-16050978)
chr3 (68-166)||(24177737-24177835)
chr3 (68-187)||(35960929-35961049)
chr3 (40-119)||(15566744-15566823)
chr3 (174-232)||(5200277-5200335)
chr3 (70-167)||(11885560-11885657)
chr3 (6-119)||(14152338-14152451)
chr3 (171-232)||(35064684-35064745)
chr3 (6-74)||(17325560-17325628)
chr3 (36-88)||(50347604-50347656)
chr3 (28-97)||(14641509-14641578)
chr3 (84-163)||(37039005-37039085)
chr3 (40-104)||(53646032-53646096)
chr3 (68-135)||(36528851-36528918)
chr3 (68-189)||(49968860-49968981)
chr3 (40-97)||(6159427-6159484)
chr3 (68-148)||(12509351-12509431)
chr3 (68-119)||(15446869-15446920)
chr3 (28-97)||(12917265-12917336)
chr3 (29-97)||(3527117-3527187)
chr3 (68-119)||(17208524-17208575)
chr3 (68-119)||(22652773-22652824)
chr3 (68-98)||(5200244-5200274)
[»] chr7 (61 HSPs)
chr7 (6-232)||(12465199-12465425)
chr7 (6-232)||(8851098-8851324)
chr7 (13-232)||(13147418-13147637)
chr7 (6-232)||(12372161-12372387)
chr7 (6-232)||(32433528-32433754)
chr7 (6-232)||(12322869-12323095)
chr7 (6-220)||(11067367-11067581)
chr7 (6-232)||(16999320-16999549)
chr7 (28-232)||(12127124-12127328)
chr7 (68-232)||(20620173-20620337)
chr7 (13-232)||(46386038-46386253)
chr7 (68-232)||(14180399-14180563)
chr7 (68-232)||(20214034-20214198)
chr7 (68-232)||(20586239-20586403)
chr7 (71-218)||(10277228-10277375)
chr7 (68-232)||(24269948-24270112)
chr7 (11-119)||(43276688-43276796)
chr7 (6-191)||(47974759-47974944)
chr7 (6-166)||(12754552-12754711)
chr7 (11-96)||(19283079-19283164)
chr7 (28-129)||(44374833-44374934)
chr7 (28-129)||(44383698-44383799)
chr7 (6-102)||(14160795-14160891)
chr7 (6-97)||(58352-58443)
chr7 (68-189)||(48807326-48807448)
chr7 (13-98)||(18074593-18074678)
chr7 (6-119)||(19195611-19195726)
chr7 (68-167)||(35771442-35771542)
chr7 (68-189)||(15095638-15095759)
chr7 (71-196)||(25943041-25943166)
chr7 (6-119)||(32160139-32160252)
chr7 (68-167)||(4071771-4071871)
chr7 (68-167)||(14218896-14218996)
chr7 (68-167)||(16078281-16078381)
chr7 (68-189)||(8135239-8135359)
chr7 (68-223)||(33002057-33002204)
chr7 (109-189)||(13132363-13132443)
chr7 (6-97)||(8488033-8488124)
chr7 (68-189)||(13698639-13698761)
chr7 (71-137)||(13744662-13744728)
chr7 (68-189)||(15140143-15140264)
chr7 (6-97)||(8513692-8513783)
chr7 (28-119)||(38299748-38299841)
chr7 (54-119)||(4690650-4690715)
chr7 (68-148)||(10658852-10658932)
chr7 (28-97)||(13744469-13744540)
chr7 (68-167)||(15289056-15289156)
chr7 (68-188)||(15623950-15624069)
chr7 (28-97)||(25943289-25943360)
chr7 (11-102)||(15119251-15119342)
chr7 (117-187)||(12557853-12557923)
chr7 (12-58)||(16214535-16214581)
chr7 (28-85)||(14156353-14156410)
chr7 (68-148)||(36704572-36704652)
chr7 (107-187)||(41284963-41285043)
chr7 (68-119)||(16250223-16250274)
chr7 (68-119)||(29052183-29052234)
chr7 (109-167)||(36685187-36685245)
chr7 (54-119)||(43745656-43745721)
chr7 (68-160)||(30820152-30820243)
chr7 (28-97)||(37539470-37539541)
[»] chr6 (32 HSPs)
chr6 (6-232)||(7827859-7828085)
chr6 (6-232)||(23150226-23150452)
chr6 (6-232)||(19655170-19655396)
chr6 (6-232)||(18703451-18703681)
chr6 (6-232)||(18709386-18709616)
chr6 (18-232)||(27125428-27125642)
chr6 (68-232)||(15890713-15890877)
chr6 (68-217)||(27329982-27330131)
chr6 (68-217)||(27390722-27390871)
chr6 (68-168)||(24267800-24267900)
chr6 (6-85)||(17318105-17318184)
chr6 (6-119)||(20410451-20410564)
chr6 (70-191)||(18585733-18585854)
chr6 (68-223)||(28948470-28948626)
chr6 (68-185)||(18928614-18928732)
chr6 (72-206)||(19235037-19235170)
chr6 (68-222)||(30673403-30673550)
chr6 (156-222)||(19167926-19167992)
chr6 (68-185)||(19401028-19401145)
chr6 (28-97)||(19825447-19825516)
chr6 (6-119)||(31734708-31734820)
chr6 (68-167)||(31731905-31732005)
chr6 (28-87)||(25922033-25922092)
chr6 (68-142)||(27572123-27572198)
chr6 (40-102)||(23431420-23431482)
chr6 (68-128)||(15998880-15998940)
chr6 (68-148)||(24550169-24550249)
chr6 (68-137)||(19167854-19167923)
chr6 (28-97)||(10446239-10446310)
chr6 (68-119)||(12041621-12041672)
chr6 (68-189)||(23501601-23501723)
chr6 (28-119)||(13285748-13285841)
[»] chr4 (36 HSPs)
chr4 (6-232)||(25091540-25091766)
chr4 (6-232)||(53630413-53630639)
chr4 (6-232)||(10356375-10356601)
chr4 (6-232)||(16998412-16998638)
chr4 (6-232)||(42875684-42875910)
chr4 (12-232)||(19610211-19610431)
chr4 (45-237)||(11425825-11426017)
chr4 (68-232)||(15115109-15115273)
chr4 (68-228)||(37019561-37019721)
chr4 (71-218)||(6633541-6633688)
chr4 (71-218)||(46001535-46001682)
chr4 (6-119)||(10694184-10694297)
chr4 (6-119)||(10907950-10908063)
chr4 (6-119)||(12424229-12424342)
chr4 (6-119)||(25513851-25513964)
chr4 (11-119)||(9639010-9639118)
chr4 (6-102)||(40230323-40230419)
chr4 (6-97)||(19022366-19022457)
chr4 (68-187)||(9924085-9924205)
chr4 (68-184)||(14549695-14549811)
chr4 (68-166)||(19434560-19434658)
chr4 (68-148)||(15613061-15613141)
chr4 (72-189)||(9870449-9870568)
chr4 (36-119)||(33186903-33186986)
chr4 (68-185)||(11478654-11478772)
chr4 (68-167)||(21147-21247)
chr4 (154-206)||(26921708-26921760)
chr4 (68-148)||(51993532-51993612)
chr4 (6-102)||(44023546-44023638)
chr4 (40-102)||(33243267-33243329)
chr4 (54-119)||(2424374-2424439)
chr4 (28-97)||(10273405-10273476)
chr4 (68-119)||(15008963-15009014)
chr4 (68-119)||(16296938-16296989)
chr4 (68-166)||(21062593-21062692)
chr4 (68-119)||(35811377-35811428)
[»] chr1 (31 HSPs)
chr1 (6-232)||(19676598-19676824)
chr1 (11-232)||(21045993-21046214)
chr1 (6-232)||(20633570-20633799)
chr1 (40-232)||(16058287-16058478)
chr1 (68-232)||(42912936-42913100)
chr1 (6-102)||(41225393-41225489)
chr1 (6-102)||(41226646-41226742)
chr1 (11-97)||(20588660-20588746)
chr1 (11-97)||(20593198-20593284)
chr1 (6-119)||(28476673-28476786)
chr1 (68-167)||(13302853-13302953)
chr1 (68-191)||(24723352-24723475)
chr1 (68-223)||(51324400-51324555)
chr1 (6-97)||(12710889-12710980)
chr1 (15-167)||(22350668-22350815)
chr1 (68-191)||(7051923-7052046)
chr1 (68-222)||(21168831-21168984)
chr1 (28-97)||(8306628-8306697)
chr1 (68-167)||(42697735-42697835)
chr1 (68-167)||(45755471-45755571)
chr1 (68-157)||(4595854-4595944)
chr1 (68-189)||(7320595-7320716)
chr1 (68-148)||(21239050-21239130)
chr1 (68-191)||(44822022-44822145)
chr1 (68-119)||(46197746-46197797)
chr1 (68-119)||(51336479-51336530)
chr1 (68-119)||(12327744-12327795)
chr1 (68-119)||(29763633-29763684)
chr1 (71-137)||(45499374-45499439)
chr1 (107-167)||(11946392-11946453)
chr1 (68-97)||(22145667-22145696)
[»] chr2 (39 HSPs)
chr2 (11-235)||(5031073-5031297)
chr2 (11-232)||(24780784-24781005)
chr2 (6-232)||(24436535-24436761)
chr2 (6-232)||(9975816-9976042)
chr2 (6-219)||(22251387-22251600)
chr2 (28-232)||(17307373-17307577)
chr2 (12-232)||(2523692-2523912)
chr2 (68-232)||(24516073-24516237)
chr2 (68-232)||(40912207-40912371)
chr2 (54-232)||(19201187-19201365)
chr2 (107-232)||(27484517-27484642)
chr2 (71-218)||(37270600-37270747)
chr2 (115-232)||(36841151-36841268)
chr2 (6-181)||(27852605-27852777)
chr2 (68-189)||(25142133-25142255)
chr2 (6-96)||(21369316-21369406)
chr2 (40-191)||(22501897-22502050)
chr2 (40-191)||(22509831-22509984)
chr2 (68-216)||(3539740-3539888)
chr2 (68-191)||(357809-357932)
chr2 (69-191)||(1383545-1383667)
chr2 (6-79)||(36841267-36841340)
chr2 (6-101)||(31521187-31521282)
chr2 (11-97)||(14179672-14179758)
chr2 (40-115)||(149474-149549)
chr2 (6-97)||(14183405-14183496)
chr2 (6-87)||(20916339-20916420)
chr2 (68-167)||(44072509-44072608)
chr2 (68-148)||(25046088-25046169)
chr2 (68-119)||(21080970-21081021)
chr2 (11-58)||(24718080-24718127)
chr2 (82-167)||(18390229-18390314)
chr2 (68-167)||(5986128-5986228)
chr2 (68-189)||(19358820-19358942)
chr2 (105-166)||(18388227-18388289)
chr2 (136-190)||(24884399-24884453)
chr2 (68-148)||(14694296-14694377)
chr2 (56-97)||(23801518-23801559)
chr2 (40-87)||(12626399-12626447)
[»] scaffold1283 (1 HSPs)
scaffold1283 (6-232)||(407-633)
[»] chr8 (52 HSPs)
chr8 (11-232)||(42817851-42818072)
chr8 (13-223)||(19140661-19140870)
chr8 (6-232)||(39935946-39936175)
chr8 (68-241)||(20083639-20083812)
chr8 (68-232)||(6101754-6101918)
chr8 (77-232)||(5082222-5082377)
chr8 (54-232)||(5761421-5761598)
chr8 (71-232)||(6573060-6573221)
chr8 (71-218)||(37292606-37292753)
chr8 (71-218)||(6202677-6202824)
chr8 (11-119)||(18761448-18761556)
chr8 (120-241)||(20178581-20178704)
chr8 (6-102)||(21579145-21579241)
chr8 (11-114)||(22258250-22258353)
chr8 (6-97)||(36306019-36306110)
chr8 (68-221)||(20397511-20397656)
chr8 (6-98)||(23943765-23943857)
chr8 (68-223)||(22532133-22532288)
chr8 (68-223)||(22536818-22536973)
chr8 (15-97)||(18834444-18834526)
chr8 (52-157)||(20022025-20022131)
chr8 (5-102)||(29762806-29762903)
chr8 (72-235)||(31722498-31722661)
chr8 (71-167)||(39694281-39694377)
chr8 (68-167)||(17906850-17906949)
chr8 (28-119)||(22208269-22208360)
chr8 (68-189)||(45469220-45469342)
chr8 (28-87)||(12037125-12037184)
chr8 (68-189)||(22317912-22318033)
chr8 (54-119)||(4380604-4380669)
chr8 (68-159)||(23899988-23900080)
chr8 (68-167)||(36727039-36727139)
chr8 (28-97)||(22345186-22345257)
chr8 (28-97)||(22356846-22356917)
chr8 (105-167)||(42265546-42265609)
chr8 (71-137)||(36305837-36305903)
chr8 (68-148)||(19700131-19700212)
chr8 (68-148)||(23419411-23419492)
chr8 (72-167)||(17218653-17218749)
chr8 (68-143)||(22254741-22254817)
chr8 (68-167)||(23948214-23948314)
chr8 (28-96)||(23884192-23884262)
chr8 (68-119)||(26454708-26454759)
chr8 (68-98)||(17158964-17158994)
chr8 (68-98)||(19880843-19880873)
chr8 (68-134)||(22583661-22583727)
chr8 (68-98)||(23479103-23479133)
chr8 (72-134)||(23889784-23889846)
chr8 (68-97)||(12577901-12577930)
chr8 (28-102)||(20879489-20879565)
chr8 (54-115)||(21514695-21514756)
chr8 (68-97)||(22610268-22610297)
[»] scaffold0737 (1 HSPs)
scaffold0737 (6-232)||(4653-4879)
[»] scaffold0077 (2 HSPs)
scaffold0077 (11-232)||(34226-34447)
scaffold0077 (68-148)||(5921-6001)
[»] scaffold0064 (1 HSPs)
scaffold0064 (6-232)||(58633-58859)
[»] scaffold0001 (3 HSPs)
scaffold0001 (6-232)||(31881-32107)
scaffold0001 (6-232)||(37188-37414)
scaffold0001 (6-232)||(77574-77800)
[»] scaffold0080 (2 HSPs)
scaffold0080 (12-232)||(21738-21958)
scaffold0080 (6-60)||(58826-58880)
[»] scaffold1633 (1 HSPs)
scaffold1633 (11-232)||(1092-1313)
[»] scaffold0407 (1 HSPs)
scaffold0407 (6-232)||(11214-11439)
[»] scaffold0111 (2 HSPs)
scaffold0111 (40-219)||(12506-12685)
scaffold0111 (70-232)||(5270-5432)
[»] chr5 (29 HSPs)
chr5 (40-232)||(21300017-21300209)
chr5 (31-232)||(19921525-19921732)
chr5 (71-218)||(7484903-7485050)
chr5 (68-228)||(20566445-20566597)
chr5 (11-119)||(23199151-23199259)
chr5 (58-206)||(31622038-31622178)
chr5 (6-97)||(21398583-21398674)
chr5 (62-191)||(36508628-36508757)
chr5 (68-167)||(21617929-21618029)
chr5 (68-167)||(20469177-20469277)
chr5 (68-191)||(31456888-31457011)
chr5 (71-137)||(22111810-22111876)
chr5 (31-97)||(32607280-32607346)
chr5 (68-148)||(25249829-25249910)
chr5 (68-148)||(25313613-25313694)
chr5 (6-119)||(26762403-26762515)
chr5 (68-119)||(266038-266089)
chr5 (68-119)||(6551291-6551342)
chr5 (36-92)||(8503857-8503913)
chr5 (68-148)||(10954060-10954140)
chr5 (107-187)||(31251931-31252011)
chr5 (68-119)||(17011728-17011779)
chr5 (68-119)||(18744874-18744925)
chr5 (136-190)||(17876132-17876186)
chr5 (105-189)||(21405665-21405751)
chr5 (70-119)||(30616614-30616663)
chr5 (68-167)||(10774665-10774763)
chr5 (54-102)||(14025794-14025842)
chr5 (170-206)||(22111729-22111765)
[»] scaffold0019 (1 HSPs)
scaffold0019 (6-167)||(24070-24231)
[»] scaffold1941 (1 HSPs)
scaffold1941 (68-232)||(25-189)
[»] scaffold0036 (1 HSPs)
scaffold0036 (12-180)||(78130-78298)
[»] scaffold1766 (1 HSPs)
scaffold1766 (68-232)||(697-861)
[»] scaffold0241 (2 HSPs)
scaffold0241 (68-232)||(3069-3233)
scaffold0241 (125-232)||(2451-2558)
[»] scaffold0207 (1 HSPs)
scaffold0207 (68-232)||(13393-13557)
[»] scaffold0020 (3 HSPs)
scaffold0020 (68-232)||(169000-169164)
scaffold0020 (63-232)||(143498-143667)
scaffold0020 (6-102)||(174238-174334)
[»] scaffold0334 (1 HSPs)
scaffold0334 (68-232)||(405-569)
[»] scaffold0026 (1 HSPs)
scaffold0026 (68-232)||(146610-146774)
[»] scaffold0004 (5 HSPs)
scaffold0004 (54-232)||(328275-328455)
scaffold0004 (71-220)||(75691-75834)
scaffold0004 (71-159)||(110133-110222)
scaffold0004 (75-222)||(72841-72980)
scaffold0004 (28-97)||(73109-73180)
[»] scaffold0632 (1 HSPs)
scaffold0632 (68-232)||(1052-1216)
[»] scaffold0956 (1 HSPs)
scaffold0956 (11-150)||(2524-2663)
[»] scaffold0047 (1 HSPs)
scaffold0047 (6-228)||(78955-79162)
[»] scaffold0149 (2 HSPs)
scaffold0149 (68-206)||(29574-29711)
scaffold0149 (68-191)||(21539-21662)
[»] scaffold0113 (1 HSPs)
scaffold0113 (68-193)||(35418-35541)
[»] scaffold0431 (1 HSPs)
scaffold0431 (6-119)||(5633-5746)
[»] scaffold0213 (1 HSPs)
scaffold0213 (11-119)||(19207-19315)
[»] scaffold0162 (1 HSPs)
scaffold0162 (5-97)||(23830-23922)
[»] scaffold0285 (1 HSPs)
scaffold0285 (68-228)||(19652-19804)
[»] scaffold0037 (3 HSPs)
scaffold0037 (72-223)||(112971-113123)
scaffold0037 (68-185)||(81501-81618)
scaffold0037 (68-157)||(117808-117899)
[»] scaffold0230 (1 HSPs)
scaffold0230 (70-191)||(6688-6809)
[»] scaffold0853 (1 HSPs)
scaffold0853 (11-119)||(2399-2506)
[»] scaffold0107 (1 HSPs)
scaffold0107 (11-87)||(13496-13572)
[»] scaffold0203 (1 HSPs)
scaffold0203 (40-119)||(17913-17992)
[»] scaffold0628 (1 HSPs)
scaffold0628 (52-189)||(1043-1181)
[»] scaffold0379 (2 HSPs)
scaffold0379 (11-97)||(10969-11055)
scaffold0379 (71-184)||(10741-10846)
[»] scaffold0174 (6 HSPs)
scaffold0174 (71-206)||(5183-5310)
scaffold0174 (71-206)||(11303-11430)
scaffold0174 (71-221)||(19605-19754)
scaffold0174 (28-119)||(5454-5545)
scaffold0174 (28-96)||(11639-11707)
scaffold0174 (28-97)||(19878-19947)
[»] scaffold0112 (1 HSPs)
scaffold0112 (68-222)||(2793-2940)
[»] scaffold0008 (1 HSPs)
scaffold0008 (68-188)||(135505-135625)
[»] scaffold0083 (2 HSPs)
scaffold0083 (68-191)||(10756-10877)
scaffold0083 (68-142)||(5046-5120)
[»] scaffold0032 (1 HSPs)
scaffold0032 (40-119)||(61821-61900)
[»] scaffold0156 (1 HSPs)
scaffold0156 (73-191)||(16532-16650)
[»] scaffold0802 (1 HSPs)
scaffold0802 (68-187)||(4710-4830)
[»] scaffold0414 (1 HSPs)
scaffold0414 (6-97)||(11099-11190)
[»] scaffold0328 (1 HSPs)
scaffold0328 (40-97)||(18613-18670)
[»] scaffold0220 (1 HSPs)
scaffold0220 (68-167)||(19906-20005)
[»] scaffold0125 (1 HSPs)
scaffold0125 (11-87)||(28583-28659)
[»] scaffold0100 (1 HSPs)
scaffold0100 (71-206)||(26638-26767)
[»] scaffold0175 (1 HSPs)
scaffold0175 (68-189)||(8571-8693)
[»] scaffold0040 (1 HSPs)
scaffold0040 (68-191)||(106052-106175)
[»] scaffold0028 (1 HSPs)
scaffold0028 (67-189)||(3052-3174)
[»] scaffold0848 (1 HSPs)
scaffold0848 (117-189)||(2071-2143)
[»] scaffold0371 (2 HSPs)
scaffold0371 (6-102)||(10385-10481)
scaffold0371 (6-58)||(3935-3987)
[»] scaffold0075 (1 HSPs)
scaffold0075 (68-167)||(60846-60946)
[»] scaffold0676 (1 HSPs)
scaffold0676 (40-119)||(2881-2960)
[»] scaffold0123 (1 HSPs)
scaffold0123 (68-189)||(7205-7328)
[»] scaffold0010 (1 HSPs)
scaffold0010 (76-167)||(126313-126404)
[»] scaffold0256 (1 HSPs)
scaffold0256 (75-137)||(1855-1917)
[»] scaffold1256 (1 HSPs)
scaffold1256 (54-119)||(2187-2252)
[»] scaffold0516 (1 HSPs)
scaffold0516 (54-115)||(5292-5353)
[»] scaffold0251 (1 HSPs)
scaffold0251 (68-184)||(20087-20202)
[»] scaffold0074 (1 HSPs)
scaffold0074 (6-87)||(1970-2051)
[»] scaffold0056 (1 HSPs)
scaffold0056 (68-164)||(67075-67172)
[»] scaffold0041 (1 HSPs)
scaffold0041 (72-121)||(5712-5761)
[»] scaffold0439 (1 HSPs)
scaffold0439 (111-190)||(12323-12403)
[»] scaffold0395 (1 HSPs)
scaffold0395 (6-58)||(11950-12002)
[»] scaffold0031 (1 HSPs)
scaffold0031 (28-97)||(127302-127373)
[»] scaffold0577 (1 HSPs)
scaffold0577 (68-167)||(9012-9110)
[»] scaffold0515 (1 HSPs)
scaffold0515 (68-119)||(5029-5080)
[»] scaffold0306 (1 HSPs)
scaffold0306 (68-119)||(5029-5080)
[»] scaffold0071 (1 HSPs)
scaffold0071 (68-119)||(15272-15323)
[»] scaffold0057 (1 HSPs)
scaffold0057 (68-119)||(69854-69905)
[»] scaffold0671 (1 HSPs)
scaffold0671 (68-148)||(4910-4991)
[»] scaffold0261 (1 HSPs)
scaffold0261 (154-203)||(6620-6669)
[»] scaffold0003 (1 HSPs)
scaffold0003 (71-148)||(96369-96446)
[»] scaffold0002 (1 HSPs)
scaffold0002 (68-148)||(398532-398613)
[»] scaffold0589 (1 HSPs)
scaffold0589 (68-167)||(4336-4436)
[»] scaffold0151 (1 HSPs)
scaffold0151 (68-167)||(31061-31159)
[»] scaffold0007 (1 HSPs)
scaffold0007 (68-167)||(158823-158922)
[»] scaffold0878 (1 HSPs)
scaffold0878 (29-97)||(3383-3452)
[»] scaffold0436 (1 HSPs)
scaffold0436 (68-119)||(8960-9011)
[»] scaffold0308 (1 HSPs)
scaffold0308 (105-167)||(13392-13455)
[»] scaffold0138 (2 HSPs)
scaffold0138 (68-119)||(21097-21148)
scaffold0138 (68-119)||(34112-34163)
[»] scaffold0070 (1 HSPs)
scaffold0070 (40-79)||(11193-11232)
[»] scaffold0042 (1 HSPs)
scaffold0042 (68-166)||(29340-29439)
[»] scaffold0859 (1 HSPs)
scaffold0859 (111-189)||(4612-4690)
[»] scaffold0601 (1 HSPs)
scaffold0601 (68-98)||(197-227)
[»] scaffold0116 (1 HSPs)
scaffold0116 (105-166)||(35501-35563)
[»] scaffold0061 (2 HSPs)
scaffold0061 (28-119)||(14546-14638)
scaffold0061 (28-119)||(23604-23696)
[»] scaffold1128 (1 HSPs)
scaffold1128 (107-167)||(449-510)
[»] scaffold0505 (1 HSPs)
scaffold0505 (56-97)||(4958-4999)
[»] scaffold0180 (1 HSPs)
scaffold0180 (68-113)||(11635-11680)
[»] scaffold0017 (1 HSPs)
scaffold0017 (70-119)||(26727-26776)
[»] scaffold0819 (1 HSPs)
scaffold0819 (68-167)||(5319-5417)
[»] scaffold0369 (1 HSPs)
scaffold0369 (28-89)||(15576-15638)
[»] scaffold0065 (1 HSPs)
scaffold0065 (72-167)||(52549-52645)


Alignment Details
Target: chr3 (Bit Score: 183; Significance: 4e-99; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 17045079 - 17044853
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||    
T  17045079 tcagagaagagaagaatcttgtgagaagatgagtaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagtt 17044980  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  17044979 gtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaa 17044880  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    | |||||||||||||||| ||||||||    
T  17044879 tttgttgaatttgtgtagaattgatgt 17044853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 6 - 230
Target Start/End: Original strand, 41172310 - 41172534
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| |||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||| ||    
T  41172310 tcagagaagagaagaatcttgtgacaagatgagcaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctacttataagtt 41172409  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||    
T  41172410 gtataactctgaaattgagtttagcatgttgtaggttgtagttatgggaattagggaattaggttttgaagttgtaattggttgttaatagagtagaaaa 41172509  T
Q  206 tatgttgaatttgtgtagtattgat 230  Q
    | |||||||||||||||| ||||||    
T  41172510 tttgttgaatttgtgtagaattgat 41172534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 6 - 220
Target Start/End: Original strand, 22306522 - 22306736
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||    
T  22306522 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagtt 22306621  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  22306622 gtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgtgaattaggttttgaagttgtaattggttgttaatagagtagaaaa 22306721  T
Q  206 tatgttgaatttgtg 220  Q
    |  ||||||||||||    
T  22306722 tccgttgaatttgtg 22306736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 17047239 - 17047013
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||    
T  17047239 tcagagaagagaagaatcttgtgagaagaggagtaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagtt 17047140  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||  | |||||||||||||||||||||||||||||| ||||    
T  17047139 gtataattctgaaattgagtttagcatgttgtaggttgtagttatttgaatttgggaattaagttttgaagttgtaattggttgttaatagagtaaaaaa 17047040  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  ||||||||||||||| ||||||||    
T  17047039 tccgttgaatttgtgtagaattgatgt 17047013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 17694180 - 17693954
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||| ||| ||    
T  17694180 tcagagaagagaagaatcttgcgagaagaggagcaatcttgtagagtccgatcatctaatttaatgtaagggtgagactaactttctctaattctaagtt 17694081  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||| | |||||||||||||||||    
T  17694080 gtataattctaaaattgagtttagcatgttgtaggttgtagttatggaaatttgtgaattagattttgaagttgtaattgatcgttaatagagtagaaaa 17693981  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  ||||||||||||||| ||||||||    
T  17693980 tccgttgaatttgtgtagaattgatgt 17693954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 11 - 232
Target Start/End: Complemental strand, 17539214 - 17538993
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatata 110  Q
    |||||||||||| ||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||||| |||||||||| ||||||| ||| || ||||    
T  17539214 gaagagaagaatcttgtgagaagaggagtaatcttgtagaatccgatcatctaatttaaggtaagggtgagactaactttatctaattctaagttgtata 17539115  T
Q  111 attctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgt 210  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| |||    
T  17539114 attctgaaattgattttatcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagatgtaattggttgttaatagagtagaaaatctgt 17539015  T
Q  211 tgaatttgtgtagtattgatgt 232  Q
    ||||||||||||| ||||||||    
T  17539014 tgaatttgtgtagaattgatgt 17538993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 35354715 - 35354489
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| |||||| |||| ||||||||||||||||||| ||||||||||| ||| |||| |||||||||||||||||||||| ||| ||    
T  35354715 tcagagaagagaagaatcttgtgataagaggagcaatcttgtagagtccaatcatctaatttaagctaagtgtgggactaactttctctaattttaagtt 35354616  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| | ||||||||||||||| |||||  ||||||||||||    
T  35354615 gtataattctgaaattgagtttagcatgttgttggttgtagttatgggaatttggaaattaggttttgaagttgtaattgattgttggtagagtagaaaa 35354516  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  ||||||||||||||| ||||||||    
T  35354515 tccgttgaatttgtgtagaattgatgt 35354489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 31 - 241
Target Start/End: Complemental strand, 49900818 - 49900608
Alignment:
Q  31 aagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagc 130  Q
    |||| ||| ||||| |||||| |||||||||||||  ||||||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||||||    
T  49900818 aagaggagtaatctcgtagagaccgatcatctaatctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaattgagtttagc 49900719  T
Q  131 atgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgat 230  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  49900718 atgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgat 49900619  T
Q  231 gtccatctcat 241  Q
    || ||| ||||    
T  49900618 gttcatatcat 49900608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 13 - 232
Target Start/End: Complemental strand, 11259537 - 11259318
Alignment:
Q  13 agagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataat 112  Q
    |||||||||| ||| ||||||| |||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||| ||| || ||||||    
T  11259537 agagaagaatcttgcgagaagaggagcaatcttgtagagtccgattatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataat 11259438  T
Q  113 tctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttg 212  Q
    ||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||||||||| ||||||||| ||||||||||  ||||    
T  11259437 tctgaaattgaatttagcatgttgtagattgtagttatgagaatttgggaattaggttttgaagttgtaattgattgttaataaagtagaaaatccgttg 11259338  T
Q  213 aatttgtgtagtattgatgt 232  Q
    ||||||||||| | ||||||    
T  11259337 aatttgtgtagaagtgatgt 11259318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 40812942 - 40812720
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| ||||| |||||| |||||||||||||| |||| ||||||||| ||||||    ||  ||||||||||||||||||||||||||||||| ||| ||    
T  40812942 tcagagaagaaaagaatcttgtgagaagatgaacaattttgtagagttcgatca----atctaaggtaagggtgggactaactttctctaattctaagtt 40812847  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||    
T  40812846 gcataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattgattgttaatagagtagaaaa 40812747  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  ||||||||||||||| ||||||||    
T  40812746 tccgttgaatttgtgtagaattgatgt 40812720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 40 - 232
Target Start/End: Original strand, 17518846 - 17519038
Alignment:
Q  40 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtag 139  Q
    |||||| |||||||||||||||||||  |||| |||||||||||||||||||||||||| ||| || ||||||||||||||||| ||||| |||||||||    
T  17518846 aatcttctagagtccgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaattgactttagaatgttgtag 17518945  T
Q  140 gttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  17518946 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 17519038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 40 - 232
Target Start/End: Original strand, 17533708 - 17533900
Alignment:
Q  40 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtag 139  Q
    |||||| |||||||||||||||||||  |||| |||||||||||||||||||||||||| ||| || ||||||||||||||||| ||||| |||||||||    
T  17533708 aatcttctagagtccgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaattgactttagaatgttgtag 17533807  T
Q  140 gttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  17533808 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 17533900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 68 - 232
Target Start/End: Complemental strand, 40808047 - 40807883
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40808047 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 40807948  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
     | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  40807947 gttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 40807883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 68 - 232
Target Start/End: Complemental strand, 44274469 - 44274305
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  44274469 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattat 44274370  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
    || ||||||||||||||||||||||||||||||||||||   |||||||||||||| ||||||||    
T  44274369 attttgaagttgtaattggttgttaatagagtagaaaattcattgaatttgtgtagaattgatgt 44274305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 6 - 232
Target Start/End: Original strand, 15931447 - 15931672
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| ||| ||||||||||||||||||||| ||||| ||||||| |||| |||||||||||||||||| ||| |     
T  15931447 tcagagaagagaagaatcttgtgagaagaggagtaatcttgtagagtccgatcatttaatttaaggtaaaggtgagactaactttctctaattctaagtg 15931546  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     |||||||||||||| |||||||||||||| ||||||||||||||| |||||| |||||||| | | ||||||||||||  || ||||||||||||||||    
T  15931547 -tataattctgaaatagagtttagcatgttttaggttgtagttatgagaattttggaattaggtttcgaagttgtaattaattattaatagagtagaaaa 15931645  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  ||||||||||||||| ||||||||    
T  15931646 ttcgttgaatttgtgtagaattgatgt 15931672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 6 - 216
Target Start/End: Complemental strand, 14508960 - 14508749
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||| ||| ||||||||||| ||| ||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||| ||| ||    
T  14508960 tcagagaagagaataatcttgtgagaagaagagtaatcttgtagagtccgatcatctaatttatggtaagggtgagactaactttctctaattctaagtt 14508861  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatatt-gaagttgtaattggttgttaatagagtagaaa 204  Q
     |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| | || ||||||||||||||||||  | |||||||| |    
T  14508860 gtataattctgaaattgaggttagcatgttgtaggttgtagttatgggaattttggaattaggttttggaagttgtaattggttgtagaaagagtagata 14508761  T
Q  205 atatgttgaatt 216  Q
    || || ||||||    
T  14508760 atctgatgaatt 14508749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 82 - 232
Target Start/End: Original strand, 50348041 - 50348191
Alignment:
Q  82 actaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgta 181  Q
    ||||||||||||||||| ||| || ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  50348041 actaactttctctaattctaagttgtataattttaaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgta 50348140  T
Q  182 attggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  50348141 attggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 50348191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 68 - 232
Target Start/End: Complemental strand, 10563759 - 10563596
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||| ||||||||||||||||||||||| ||| || ||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  10563759 aaggtaatggtgggactaactttctctaattttaagttgtataattatgaaattgagtttagcatgttgtagtttgtagttatggaaatttgggaattag 10563660  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
     | |||||||||||||||||||||||||||||||||||   |||||||||| |||| ||||||||    
T  10563659 gttttgaagttgtaattggttgttaatagagtagaaaagccgttgaatttg-gtagaattgatgt 10563596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 71 - 218
Target Start/End: Complemental strand, 10311575 - 10311428
Alignment:
Q  71 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 170  Q
    |||||||||||||||||||||||||||| ||  || ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||| ||||||| |     
T  10311575 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgaattttgcatgttgtaggttgtagttatgagaatttgagaattaggtt 10311476  T
Q  171 ttgaagttgtaattggttgttaatagagtagaaaatatgttgaatttg 218  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  10311475 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 10311428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 17541547 - 17541423
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||| ||    
T  17541547 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagtt 17541448  T
Q  106 atataattctgaaattgagtttagc 130  Q
     ||||||||||||||||||||||||    
T  17541447 gtataattctgaaattgagtttagc 17541423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 184
Target Start/End: Original strand, 35064566 - 35064658
Alignment:
Q  92 tctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaatt 184  Q
    ||||||| ||| || ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||    
T  35064566 tctaattctaagttgtataattttgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaattaggttttgaagttgtaatt 35064658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 52 - 189
Target Start/End: Complemental strand, 11563792 - 11563654
Alignment:
Q  52 tccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttat 150  Q
    ||||||||||||||  |||||||||||||||||||| |||||||||| ||| |  |||||||||| ||||  | |||| || |||||||||||||||| |    
T  11563792 tccgatcatctaatctaaggtaagggtgggactaaccttctctaattctaagtggtataattctgaaaatcaaatttaacaagttgtaggttgtagtttt 11563693  T
Q  151 gggaatttgggaattagatattgaagttgtaattggttg 189  Q
    ||||||||||||||||| | |  ||||||||||||||||    
T  11563692 gggaatttgggaattaggtttaaaagttgtaattggttg 11563654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 187
Target Start/End: Original strand, 19568209 - 19568328
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||||||||||||||||||| ||| || ||| ||||||||| |   |||| || |||||||||||||||| ||||||||||||||||||    
T  19568209 aaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactagatttaacaggttgtaggttgtagttttgggaatttgggaattag 19568308  T
Q  168 atattgaagttgtaattggt 187  Q
       | |||||||||||||||    
T  19568309 ggttagaagttgtaattggt 19568328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 33565138 - 33565018
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||| |||||||||||||||||| ||| |  ||||||||||||| |||| |||| || ||||||||||| |||| ||||||||||| |||||    
T  33565138 aaggtaagggtgtgactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatta 33565039  T
Q  167 gatattgaagttgtaattggt 187  Q
    | | | |||||||||||||||    
T  33565038 ggtttagaagttgtaattggt 33565018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 189
Target Start/End: Original strand, 42323972 - 42324094
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||||||||||| || | ||||| ||| || ||||||||||||| |||| |||  ||||||||||||||||||| ||||||||||| |||||    
T  42323972 aaggtaagggtgggactaacattatttaattttaagttgtataattctgaaaattgaatttgacatgttgtaggttgtagttttgggaatttggaaatta 42324071  T
Q  167 gatattgaagttgtaattggttg 189  Q
    |   | |||||||||||||||||    
T  42324072 gggttagaagttgtaattggttg 42324094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 189
Target Start/End: Original strand, 45530553 - 45530725
Alignment:
Q  17 aagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctg 116  Q
    |||||| ||||||||| | ||||||||||||||||||||||||||||||| ||||||| | |||||||||| ||   ||||| | || ||||| ||||||    
T  45530553 aagaatcttgtgagaaaaggagcaatcttgtagagtccgatcatctaatttaaggtaa-gatgggactaacatttaataattct-aagtatatgattctg 45530650  T
Q  117 -aaattgagtttagcatgttgtaggttgtagttatgggaatttg-ggaattagatattgaagttgtaattggttg 189  Q
     ||||||| |||| || ||||| |||||||||| |||||||||| | ||||||   | |||||||||||||||||    
T  45530651 aaaattgaatttaacaggttgtgggttgtagttttgggaatttgcgaaattagggttagaagttgtaattggttg 45530725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 213
Target Start/End: Original strand, 9510917 - 9511062
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||  ||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || |||| |||||||| |||||||||| |||||||    
T  9510917 aaggtaagggtgaaactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattgtagttttgggaatttgagaattag 9511016  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttga 213  Q
     | | |||||||||||||||||||   | |||||||||| ||||||    
T  9511017 gtttagaagttgtaattggttgttttaatagtagaaaatctgttga 9511062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 213
Target Start/End: Original strand, 9518892 - 9519037
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||  ||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || |||| |||||||| |||||||||| |||||||    
T  9518892 aaggtaagggtgaaactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattgtagttttgggaatttgagaattag 9518991  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttga 213  Q
     | | |||||||||||||||||||   | |||||||||| ||||||    
T  9518992 gtttagaagttgtaattggttgttttaatagtagaaaatctgttga 9519037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 13185946 - 13185846
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattct-gaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    ||||||||||||||||||||||||||||||| ||| | ||||||||||  |||| || |||| || |||||||||||||||| ||| |||||||||||||    
T  13185946 aaggtaagggtgggactaactttctctaattttaagtgatataattctaaaaatcgaatttaacaagttgtaggttgtagttttggaaatttgggaatta 13185847  T
Q  167 g 167  Q
    |    
T  13185846 g 13185846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 50350760 - 50350867
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatata 110  Q
    |||||||||||| ||||||||||| || || | ||||||||||||||||||||||  |||||||||||||||||||| |||| |||| ||  | ||||||    
T  50350760 gaagagaagaatcttgtgagaagaggaacagtgttgtagagtccgatcatctaatctaaggtaagggtgggactaaccttctttaatcat-gagtatata 50350858  T
Q  111 attctgaaa 119  Q
    |||||||||    
T  50350859 attctgaaa 50350867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 16050978 - 16050879
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||||||||||||||||||| ||| || ||| |||||||||||| ||||| || |||||| ||||||||| || | ||||| |||||||    
T  16050978 aaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaattgggtttaacaagttgtatgttgtagttttgaggatttgagaattag 16050879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 24177737 - 24177835
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||||||| |||||||||||||||||| || ||||||||||||| ||  ||||  | || ||||||||||||| ||| |||||||||||||    
T  24177737 aaggtaagggtgggacaaactttctctaattataagttgtataattctgaaactggatttaataggtggtaggttgtagttttggaaatttgggaatta 24177835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 187
Target Start/End: Original strand, 35960929 - 35961049
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    ||||||||||||||| ||||||||||||||| ||  |  ||||||||||||| |||| |||| || ||||||||||| |||| ||| ||||||| |||||    
T  35960929 aaggtaagggtgggattaactttctctaattctatgtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttggaaatttggaaatta 35961028  T
Q  167 gatattgaagttgtaattggt 187  Q
    | | | |||||||||||||||    
T  35961029 ggtttagaagttgtaattggt 35961049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 119
Target Start/End: Complemental strand, 15566823 - 15566744
Alignment:
Q  40 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    |||||||| |||||||||||| ||||  || |||||||||||||||||||||||||||| ||| || |||||||||||||    
T  15566823 aatcttgttgagtccgatcatgtaatctaaagtaagggtgggactaactttctctaattctaagttgtataattctgaaa 15566744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 5200277 - 5200335
Alignment:
Q  174 aagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  5200277 aagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5200335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 11885560 - 11885657
Alignment:
Q  70 ggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||||||||||||||||| ||| |  |||||||||| ||||||  |||| || |||||||||||||||| |||||||||| |||||||    
T  11885560 ggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttgtagtt-tgggaatttgagaattag 11885657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 14152338 - 14152451
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| ||||||||||||| ||| |||||   |||   |||||||||||||||||| ||||||||||| || | ||    
T  14152338 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtatagttcgatccattaacctaaggtaagggtgggactagctttctctaataatgagtt 14152437  T
Q  106 atataattctgaaa 119  Q
     ||| |||||||||    
T  14152438 gtatcattctgaaa 14152451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 35064684 - 35064745
Alignment:
Q  171 ttgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
    ||||||||||||||||||||||||| ||||||||||  ||||||||||||||| ||||||||    
T  35064684 ttgaagttgtaattggttgttaatatagtagaaaatccgttgaatttgtgtagaattgatgt 35064745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 17325560 - 17325628
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaa 74  Q
    |||| |||||||||||| ||||||||||| ||| ||||||||||||||| ||||||||||| |||||||    
T  17325560 tcagagaagagaagaatcttgtgagaagaggagtaatcttgtagagtccaatcatctaatttaaggtaa 17325628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 50347604 - 50347656
Alignment:
Q  36 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaact 88  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  50347604 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaact 50347656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 14641509 - 14641578
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    ||||||| ||||||||| |||||| |||||||||||||  ||||||||||||||| || |||||||||||    
T  14641509 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggattagctttctctaat 14641578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 163
Target Start/End: Complemental strand, 37039085 - 37039005
Alignment:
Q  84 taactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaa 163  Q
    |||| |||| ||||||||| || ||||||||||||| |||  |||| ||||||||||||||||||| ||||||||||||||    
T  37039085 taacattctttaattataagttgtataattctgaaaattggatttaacatgttgtaggttgtagttttgggaatttgggaa 37039005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 53646032 - 53646096
Alignment:
Q  40 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaat 104  Q
    |||||||||||||| |||||||||||  |||||||||||||||||||| |||| |||| ||||||    
T  53646032 aatcttgtagagtctgatcatctaatctaaggtaagggtgggactaaccttctttaatcataaat 53646096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 36528918 - 36528851
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgtt 135  Q
    ||||||||||||||| ||||||||||||||| ||| | |||||||||||| |||| ||||| ||||||    
T  36528918 aaggtaagggtgggattaactttctctaattctaagtaatataattctgagattgggtttaacatgtt 36528851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 189
Target Start/End: Original strand, 49968860 - 49968981
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||| ||||||||||| ||| |||||| ||| |  ||| ||||||||| |||| |||| || ||||||| |||||||| || ||||||||||||||    
T  49968860 aaggtaagagtgggactaaccttcactaattctaagtg-tatgattctgaaaattgaatttaacaggttgtagcttgtagttttgagaatttgggaatta 49968958  T
Q  167 gatattgaagttgtaattggttg 189  Q
    | | |  ||||||||||||||||    
T  49968959 ggtttataagttgtaattggttg 49968981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 6159484 - 6159427
Alignment:
Q  40 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    ||||||||||||||||||||||||||  |||||||||||| ||||  |||||||||||    
T  6159484 aatcttgtagagtccgatcatctaatctaaggtaagggtgagactcgctttctctaat 6159427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 12509351 - 12509431
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagtt 148  Q
    |||||||||||||||| ||| |||| ||||| ||| || ||||||||||||||||  |||| ||||| ||||| |||||||    
T  12509351 aaggtaagggtgggacaaaccttctttaattctaagttgtataattctgaaattggatttaacatgtggtaggatgtagtt 12509431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 15446869 - 15446920
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||||||||||||||||||||||||||| ||| || ||| |||||||||    
T  15446869 aaggtaagggtgggactaactttctctaattctaagttgtattattctgaaa 15446920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 12917265 - 12917336
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccga--tcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    ||||||| |||||| ||||||||||||||  ||| | |||  ||| ||||||||||||||||||||||||||    
T  12917265 gagaagaggagcaagcttgtagagtccgaattcaaccaatctaagataagggtgggactaactttctctaat 12917336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 3527117 - 3527187
Alignment:
Q  29 agaagatgagcaatcttgtagagtccga--tcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    |||||| |||||| ||||||||||||||  ||| || ||  |||||||||||||||||| |||||||||||    
T  3527117 agaagaggagcaaacttgtagagtccgaattcaacttatctaaggtaagggtgggactagctttctctaat 3527187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 17208575 - 17208524
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    |||||||||||||||||| ||||||||||| || | || |||||||||||||    
T  17208575 aaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 17208524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 22652824 - 22652773
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    |||||||| |||||||||||||||||||||| ||| | || |||||||||||    
T  22652824 aaggtaagagtgggactaactttctctaattctaagtaatttaattctgaaa 22652773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 98
Target Start/End: Original strand, 5200244 - 5200274
Alignment:
Q  68 aaggtaagggtgggactaactttctctaatt 98  Q
    |||||||||||||||||||||||||||||||    
T  5200244 aaggtaagggtgggactaactttctctaatt 5200274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 6 - 232
Target Start/End: Original strand, 12465199 - 12465425
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||    
T  12465199 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagtt 12465298  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  12465299 gtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaa 12465398  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  ||||||||||||||| ||||||||    
T  12465399 tccgttgaatttgtgtagaattgatgt 12465425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 6 - 232
Target Start/End: Original strand, 8851098 - 8851324
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||    
T  8851098 tcagagaagagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagtt 8851197  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| | |||||||||||||||||||||||||||||| ||||    
T  8851198 gtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttggaaattaggttttgaagttgtaattggttgttaatagagtataaaa 8851297  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    | |||||||||||||||| ||||||||    
T  8851298 tctgttgaatttgtgtagaattgatgt 8851324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 13 - 232
Target Start/End: Original strand, 13147418 - 13147637
Alignment:
Q  13 agagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataat 112  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||| |||||||||    
T  13147418 agagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttatataat 13147517  T
Q  113 tctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttg 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||  ||||    
T  13147518 tctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaataaagtagaaaatccgttg 13147617  T
Q  213 aatttgtgtagtattgatgt 232  Q
    ||||||||||| | ||||||    
T  13147618 aatttgtgtagaagtgatgt 13147637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 12372387 - 12372161
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||    
T  12372387 tcagagaagagaagaatcttgtgtgaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagtt 12372288  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  12372287 gtataattctgaaattgagtttagcatgttgcaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaa 12372188  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  ||||||||||||||| ||||||||    
T  12372187 ttcgttgaatttgtgtagaattgatgt 12372161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 6 - 232
Target Start/End: Original strand, 32433528 - 32433754
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||| ||    
T  32433528 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagtt 32433627  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  32433628 gtataattctgaaattgagtttagcatgttgtaggttgtagttatgtgaatttgtgaattaggttttgaagttgtaattggttgttaatagagtagaaaa 32433727  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  ||||||||||||||| | ||||||    
T  32433728 ttagttgaatttgtgtagaagtgatgt 32433754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 6 - 232
Target Start/End: Original strand, 12322869 - 12323095
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| ||    
T  12322869 tcagagaagagaagaatcttgtgagaaaaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtggaactaactttctctaattctaagtt 12322968  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||| ||||||||||||||| |||||||    
T  12322969 gtataattctgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaattaggttttgaagttgtacttggttgttaatagaatagaaaa 12323068  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  ||||||||||||||| ||||||||    
T  12323069 tccgttgaatttgtgtagaattgatgt 12323095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 6 - 220
Target Start/End: Complemental strand, 11067581 - 11067367
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| |||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||| ||| ||    
T  11067581 tcagagaagagaagaatattgtgagaagaggagcaatcttatagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagtt 11067482  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| || |||||||||||||||||||||||||||    
T  11067481 gtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgatgtagtaattggttgttaatagagtagaaaa 11067382  T
Q  206 tatgttgaatttgtg 220  Q
    |  ||||||||||||    
T  11067381 ttcgttgaatttgtg 11067367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 16999549 - 16999320
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat--tataaa 103  Q
    |||| |||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||  |||||     
T  16999549 tcagagaagagaagaatcttgtgagaagaggagtaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctataag 16999450  T
Q  104 ttatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaa-tttgggaattagatattgaagttgtaattggttgttaatagagtaga 202  Q
    || ||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||| | ||||||||||||| ||||||||||||||||||    
T  16999449 ttgtataattctgaaattgagtttagcatgttatatgttgtagttatgggaattttgggaattaggttttgaagttgtaatcggttgttaatagagtaga 16999350  T
Q  203 aaatatgttgaatttgtgtagtattgatgt 232  Q
    ||||  ||||||||||||||| ||||||||    
T  16999349 aaatccgttgaatttgtgtagaattgatgt 16999320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 28 - 232
Target Start/End: Original strand, 12127124 - 12127328
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagttt 127  Q
    ||||||| ||||||||| |||||| |||||||||||||  ||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  12127124 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 12127223  T
Q  128 agcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtatt 227  Q
    | ||||||||||||| ||||||||| |||||||||||||| | ||||||||||||||||||||||| ||||||||||||  ||||||||||||||| |||    
T  12127224 aacatgttgtaggttttagttatggaaatttgggaattaggttttgaagttgtaattggttgttaagagagtagaaaattcgttgaatttgtgtagaatt 12127323  T
Q  228 gatgt 232  Q
     ||||    
T  12127324 tatgt 12127328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 68 - 232
Target Start/End: Complemental strand, 20620337 - 20620173
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||||| |||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20620337 aaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaattag 20620238  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
     | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  20620237 gttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 20620173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 232
Target Start/End: Original strand, 46386038 - 46386253
Alignment:
Q  13 agagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataat 112  Q
    |||||| ||| |||||||||||||||||||||||||| || ||||||    ||  ||| ||||||| ||||||||||||||||||| ||| || ||||||    
T  46386038 agagaataatcttgtgagaagatgagcaatcttgtagtgttcgatca----atctaagataagggtaggactaactttctctaattctaagttgtataat 46386133  T
Q  113 tctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttg 212  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||| |  ||||    
T  46386134 tctgaaattgagtttaatatgttgtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaattccgttg 46386233  T
Q  213 aatttgtgtagtattgatgt 232  Q
    ||||||||||| ||||||||    
T  46386234 aatttgtgtagaattgatgt 46386253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 68 - 232
Target Start/End: Original strand, 14180399 - 14180563
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||||||||| |||||| ||||||||||| ||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||     
T  14180399 aaggtaagggtgtgactaattttctctaattctaagttgtataattctgaaattgagtttagcatattgtaggttgtagttatgggaatttgggaattat 14180498  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
     | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  14180499 gttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 14180563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 68 - 232
Target Start/End: Complemental strand, 20214198 - 20214034
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||||||||||||||||||||||| |||| | | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  20214198 aaggtaagggtgggactaactttctcaaattctgagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaa 20214099  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
     | ||||||||||||||||||||||||||||||||||||  ||||||||||||||  ||||||||    
T  20214098 gttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtacaattgatgt 20214034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 68 - 232
Target Start/End: Complemental strand, 20586403 - 20586239
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||| |||||||||||||||||||||||||||| || || |||    
T  20586403 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaccatgttgtaggttgtagttatgggaattaggaaactag 20586304  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
       ||||||||| ||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  20586303 ggtttgaagttgcaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 20586239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 71 - 218
Target Start/End: Complemental strand, 10277375 - 10277228
Alignment:
Q  71 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 170  Q
    |||||||||||||||||||||||||||| ||  || ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| |     
T  10277375 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 10277276  T
Q  171 ttgaagttgtaattggttgttaatagagtagaaaatatgttgaatttg 218  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  10277275 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg 10277228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 68 - 232
Target Start/End: Original strand, 24269948 - 24270112
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||| ||||||||||||||| ||| || ||||||||||||||||||||||||||||||| | ||||   | || ||| |||||||||||    
T  24269948 aaggtaagggtgggattaactttctctaattttaagttgtataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaagttgggaattag 24270047  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
     | ||||||| ||||||||||||||||||||||||||||   |||||||||||||  ||||||||    
T  24270048 gttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatttgtgtacaattgatgt 24270112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 43276688 - 43276796
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatata 110  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||   || ||||    
T  43276688 gaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaataatgggttgtata 43276787  T
Q  111 attctgaaa 119  Q
    |||||||||    
T  43276788 attctgaaa 43276796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 191
Target Start/End: Original strand, 47974759 - 47974944
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| ||||| |||||| ||||||||||| ||||||| ||||||||| |||||   |||   |||||||||||| |||||||||||||||||| ||| ||    
T  47974759 tcagagaagaaaagaatcttgtgagaagaggagcaatattgtagagttcgatcgattaacctaaggtaagggtgagactaactttctctaattctaagtt 47974858  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgtt 191  Q
     ||| ||||||||| ||  |||| || || ||||||||||||| ||| |||||||||||||  | | |||||||||||||||||||    
T  47974859 gtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaattatgtttagaagttgtaattggttgtt 47974944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 6 - 166
Target Start/End: Original strand, 12754552 - 12754711
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||| | |||   |||   ||||||||||||||||||||||||||||||| ||| ||    
T  12754552 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttc-atcgattaacctaaggtaagggtgggactaactttctctaattctaagtt 12754650  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||| ||||||||| ||  |||| || || |||||||||||| |||| |||||||||||||    
T  12754651 atatgattctgaaactggatttaacaggtggtaggttgtagtaatggaaatttgggaatta 12754711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 19283164 - 19283079
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaa 96  Q
    |||||||||||| ||||||||| | ||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  19283164 gaagagaagaatcttgtgagaaaaggagtaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaa 19283079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 44374934 - 44374833
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagttt 127  Q
    ||||||| ||||||||| |||||| |||||||||||||  |||||||||||| || ||||||||||||||| ||| || |||||||||||||||||||||    
T  44374934 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaattgagttt 44374835  T
Q  128 ag 129  Q
    ||    
T  44374834 ag 44374833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 129
Target Start/End: Complemental strand, 44383799 - 44383698
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagttt 127  Q
    ||||||| ||||||||| |||||| |||||||||||||  |||||||||||| || ||||||||||||||| ||| || |||||||||||||||||||||    
T  44383799 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaattgagttt 44383700  T
Q  128 ag 129  Q
    ||    
T  44383699 ag 44383698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 14160795 - 14160891
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataa 102  Q
    |||| |||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||| |||| ||||    
T  14160795 tcagagaagagaagaatcttgtgtgaagaggagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaaccttctttaatcataa 14160891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 58352 - 58443
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    |||| |||||||||||| ||||||||||| || |||||||||||| ||||||||||||||  |||||||||||||||||| |||||||||||    
T  58352 tcagagaagagaagaatcttgtgagaagaggaacaatcttgtagattccgatcatctaatctaaggtaagggtgggactagctttctctaat 58443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 68 - 189
Target Start/End: Original strand, 48807326 - 48807448
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    ||||||||||||||||||||||||||||||| ||| |  |||||||||| |||| || |||| || ||||||| |||||||| ||||||||||||||||     
T  48807326 aaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtagattgtagttttgggaatttgggaattt 48807425  T
Q  167 gatattgaagttgtaattggttg 189  Q
    | ||  |||||||||||||||||    
T  48807426 ggtacagaagttgtaattggttg 48807448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 18074593 - 18074678
Alignment:
Q  13 agagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaatt 98  Q
    |||||||||| ||||||||||| || |||||||||||||||||| ||||||||| |||||||| |||||| |||||||||||||||    
T  18074593 agagaagaatcttgtgagaagaagatcaatcttgtagagtccgaccatctaatttaaggtaagagtgggattaactttctctaatt 18074678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 19195726 - 19195611
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaa--gatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaa 103  Q
    |||| |||||||||||| ||||||||   || || |||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||| || |     
T  19195726 tcagagaagagaagaatcttgtgagataggaggaacaatcttgtagagtccgatcatctaatctaaggtaagggtgggactagctttctctaataatgag 19195627  T
Q  104 ttatataattctgaaa 119  Q
    || |||||||||||||    
T  19195626 ttgtataattctgaaa 19195611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 35771442 - 35771542
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    ||||||||||||||||||||||||||||||| ||| | ||||||||||| |||| || |||| || |||||||||||||||| ||| |||||||||||||    
T  35771442 aaggtaagggtgggactaactttctctaattctaagtgatataattctgaaaatcgaatttaacaagttgtaggttgtagttttggaaatttgggaatta 35771541  T
Q  167 g 167  Q
    |    
T  35771542 g 35771542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 189
Target Start/End: Original strand, 15095638 - 15095759
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||||||||||| ||| |||||| ||| |  ||| ||||||||| |||| |||| || |||||||||||||||| |||||||||||||||||    
T  15095638 aaggtaagggtgggactaaccttcactaattctaagtg-tatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatta 15095736  T
Q  167 gatattgaagttgtaattggttg 189  Q
    | | | |||||||||||| ||||    
T  15095737 ggtttagaagttgtaattagttg 15095759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 25943166 - 25943041
Alignment:
Q  71 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 170  Q
    |||| ||||||| ||||||||||||||| |   || ||||||||||||||||| ||||||||||||| | ||||   | || |||||||| |||||| |     
T  25943166 gtaacggtgggattaactttctctaattttgggttgtataattctgaaattgaatttagcatgttgttgtttgtgaatttgtgaatttggaaattaggtt 25943067  T
Q  171 ttgaagttgtaattggttgttaatag 196  Q
    ||||||| ||||||||||||||||||    
T  25943066 ttgaagtcgtaattggttgttaatag 25943041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 32160139 - 32160252
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||| |||||   |||   |||||||||||  |||||||||||||||||| ||| |     
T  32160139 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaggtaagggtaagactaactttctctaattctaagta 32160238  T
Q  106 atataattctgaaa 119  Q
    || |||||||||||    
T  32160239 atttaattctgaaa 32160252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 4071871 - 4071771
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    ||||||||||||||||||||||||||||||| ||| | |||||| |||| ||||||  |||| || |||||||||||||||| |||| ||||| ||||||    
T  4071871 aaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttggggatttgagaatta 4071772  T
Q  167 g 167  Q
    |    
T  4071771 g 4071771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 14218896 - 14218996
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||| |||||||||||||||||| ||| |  |||||||||| ||||||| |||| || |||||||||||||||| || |||||| |||||||    
T  14218896 aaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgagaattttggaatta 14218995  T
Q  167 g 167  Q
    |    
T  14218996 g 14218996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 16078381 - 16078281
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    ||||||||||||||||||||||||||||||| ||| |  ||||||| || |||| || |||| || ||||||| |||||||| |||||||||||||||||    
T  16078381 aaggtaagggtgggactaactttctctaattctaagtggtataattatgaaaatcgaatttaacaagttgtagtttgtagttttgggaatttgggaatta 16078282  T
Q  167 g 167  Q
    |    
T  16078281 g 16078281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 189
Target Start/End: Original strand, 8135239 - 8135359
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||||||||| ||||||| ||| |||||  ||| |  ||| ||||||||||||| |||| || |||||||||||||||| | |||||||| |||||||    
T  8135239 aaggtaagggtgagactaaccttcactaatcctaagtg-tatgattctgaaattgaatttaacaggttgtaggttgtagttttaggaatttgagaattag 8135337  T
Q  168 atattgaagttgtaattggttg 189  Q
     | | |||||||||||||||||    
T  8135338 gtttagaagttgtaattggttg 8135359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 223
Target Start/End: Complemental strand, 33002204 - 33002057
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||| ||||||||||||||||||| ||| || ||| ||||||||||||  |||| |       ||||||||||| ||||||||||||||||||    
T  33002204 aaggtaagggtcggactaactttctctaattctaagttgtatgattctgaaattggatttaac-------aggttgtagtt-tgggaatttgggaattag 33002113  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtag 223  Q
       | |||||||||||||||||||   | |||||| ||| ||||||||| ||||||    
T  33002112 ggttagaagttgtaattggttgttgtaatagtagagaatctgttgaattggtgtag 33002057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 109 - 189
Target Start/End: Original strand, 13132363 - 13132443
Alignment:
Q  109 taattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttg 189  Q
    ||||||||||||||| |||| || ||||||||| |||||| |||||||||||||||||| | | ||||||||||| |||||    
T  13132363 taattctgaaattgaatttaacaagttgtaggtcgtagttttgggaatttgggaattaggtttagaagttgtaatcggttg 13132443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 8488033 - 8488124
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    |||| |||||||||||| ||||||||||| || |||||||||| ||| |||||   |||   ||||||||||||||||||||||||||||||    
T  8488033 tcagagaagagaagaatcttgtgagaagaagaacaatcttgtaaagttcgatcgattaacctaaggtaagggtgggactaactttctctaat 8488124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 189
Target Start/End: Original strand, 13698639 - 13698761
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    ||||||||||| ||||||||||||| ||||| ||| ||   ||||||||||| |||  |||  |||||| |||||||||||| ||| |||||||||||||    
T  13698639 aaggtaagggtaggactaactttctttaattttaagttgattaattctgaaaattggatttgacatgttttaggttgtagttttggaaatttgggaatta 13698738  T
Q  167 gatattgaagttgtaattggttg 189  Q
    |   | |||||||||||||||||    
T  13698739 gggttagaagttgtaattggttg 13698761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 71 - 137
Target Start/End: Original strand, 13744662 - 13744728
Alignment:
Q  71 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgt 137  Q
    |||||||||||| ||||||||||||||| ||  || ||||||||||||||| |||||||||||||||    
T  13744662 gtaagggtgggattaactttctctaattttaggttgtataattctgaaattaagtttagcatgttgt 13744728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 189
Target Start/End: Complemental strand, 15140264 - 15140143
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||| ||||| ||||||| ||| |||||| ||| |  ||| ||||||||| |||| |||| || |||||||||||||||| |||||||||||||||||    
T  15140264 aaggtatgggtgagactaaccttcactaattctaagtg-tatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatta 15140166  T
Q  167 gatattgaagttgtaattggttg 189  Q
    | | |  ||||||||||||||||    
T  15140165 ggtttaaaagttgtaattggttg 15140143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 8513692 - 8513783
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    |||| |||||||||||| ||||||||| | || |||||||||| ||| |||||   |||   ||||||||||||||||||||||||||||||    
T  8513692 tcagagaagagaagaatcttgtgagaataagaacaatcttgtaaagttcgatcgattaacctaaggtaagggtgggactaactttctctaat 8513783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 38299841 - 38299748
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccga--tcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||| |||||| ||||||||||| ||  |||||||||  |||||||||||||||||| ||||||||||| ||   || |||||||||||||    
T  38299841 gagaagaggagcaagcttgtagagtctgaaatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 38299748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 4690650 - 4690715
Alignment:
Q  54 cgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    |||||||||||   ||||||| ||||||||||||||||||||||| ||| || |||||||||||||    
T  4690650 cgatcatctaacctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaa 4690715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 10658852 - 10658932
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagtt 148  Q
    |||||||||||||||||||| |||| ||||| ||| || ||| ||||||||||||  |||| ||| ||||||| |||||||    
T  10658852 aaggtaagggtgggactaaccttctttaattctaagttgtatgattctgaaattggatttaacattttgtaggatgtagtt 10658932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 13744469 - 13744540
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccg--atcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    ||||||| |||||| ||||||||||| |  ||||||||||  |||||||||||||||||| |||||||||||    
T  13744469 gagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 13744540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 15289156 - 15289056
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||||||| |||||||||||||| ||| |  ||||| |||| ||||||  |||| || |||||||||||||||| || | ||||| ||||||    
T  15289156 aaggtaagggtgggaccaactttctctaattctaagtattataactctgaaaattggatttaacaagttgtaggttgtagttttgaggatttgagaatta 15289057  T
Q  167 g 167  Q
    |    
T  15289056 g 15289056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 188
Target Start/End: Complemental strand, 15624069 - 15623950
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||||||||| ||||||| |||  ||||| ||| |  ||| ||||||||||||| ||||  | ||||||| |||||||| |||||||||| |||||||    
T  15624069 aaggtaagggtgagactaaccttcaataattctaagtg-tatgattctgaaattgaatttaataggttgtagtttgtagttttgggaatttgagaattag 15623971  T
Q  168 atattgaagttgtaattggtt 188  Q
     | | | ||||||||||||||    
T  15623970 gtttaggagttgtaattggtt 15623950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 25943360 - 25943289
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccg--atcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    |||||||||| ||| ||||||||||| |  ||||||||||  |||||||||||||||||| |||||||||||    
T  25943360 gagaagatgaacaaacttgtagagtctgtaatcatctaatataaggtaagggtgggactagctttctctaat 25943289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 15119251 - 15119342
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataa 102  Q
    |||||||||||| ||||||||||| |||||||||||||||||  ||||   |||   ||||||||||| |||||||| |||| |||| ||||    
T  15119251 gaagagaagaatattgtgagaagaggagcaatcttgtagagtttgatcgattaacctaaggtaagggtaggactaaccttctttaatcataa 15119342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 187
Target Start/End: Complemental strand, 12557923 - 12557853
Alignment:
Q  117 aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggt 187  Q
    ||||||| |||| || |||||||||||||||| ||||||||||| |||||| | | ||||||| |||||||    
T  12557923 aaattgaatttaacaggttgtaggttgtagttttgggaatttggaaattaggtttagaagttgaaattggt 12557853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 16214581 - 16214535
Alignment:
Q  12 aagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatc 58  Q
    ||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  16214581 aagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatc 16214535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 14156353 - 14156410
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggacta 85  Q
    ||||||| |||||||||||||||  ||||| |||||||  ||||||||||||||||||    
T  14156353 gagaagaggagcaatcttgtagataccgataatctaatctaaggtaagggtgggacta 14156410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 36704572 - 36704652
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagtt 148  Q
    |||||||||||||||||||| |||| ||||| ||| || | |||||||||||||   |||| ||||||||| | |||||||    
T  36704572 aaggtaagggtgggactaaccttctttaattttaagttgtgtaattctgaaatttgatttaacatgttgtaagatgtagtt 36704652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 187
Target Start/End: Complemental strand, 41285043 - 41284963
Alignment:
Q  107 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggt 187  Q
    ||||||||||||||||  ||||  | ||| |||||||||||| | |||||||||||||||| | | |||||| ||||||||    
T  41285043 tataattctgaaattggatttaataggttataggttgtagttttaggaatttgggaattaggtttagaagttataattggt 41284963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 16250223 - 16250274
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    |||||||||||||||||||||||||||||| || | || ||||||| |||||    
T  16250223 aaggtaagggtgggactaactttctctaataatgagttgtataattttgaaa 16250274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 29052183 - 29052234
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||||||||||||||||||||||||||| ||| |  | |||||||||||    
T  29052183 aaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 29052234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 167
Target Start/End: Original strand, 36685187 - 36685245
Alignment:
Q  109 taattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||| ||  |||| || |||||||||||||||| ||| ||||||||||||||    
T  36685187 taattctgaaactggatttaacaggttgtaggttgtagttttggaaatttgggaattag 36685245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 43745721 - 43745656
Alignment:
Q  54 cgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    |||||||||||   |||||||||||||||||| ||||||||||| || | || ||||||| |||||    
T  43745721 cgatcatctaacctaaggtaagggtgggactagctttctctaataatgagttgtataattatgaaa 43745656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 160
Target Start/End: Original strand, 30820152 - 30820243
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgg 160  Q
    ||||| |||||||||||||| |||  ||||| | | | || ||||||||||| ||  |||| || |||||||||||||||| |||||||||||    
T  30820152 aaggtgagggtgggactaaccttcagtaattctgagt-atgtaattctgaaactggatttaacaggttgtaggttgtagttttgggaatttgg 30820243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 37539541 - 37539470
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccg--atcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    ||||||| |||||| ||||||||||| |  ||||||||||  || ||||||||||||||||| |||| ||||    
T  37539541 gagaagaggagcaagcttgtagagtctgtaatcatctaatctaaagtaagggtgggactaacattctataat 37539470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 179; Significance: 1e-96; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 7828085 - 7827859
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||    
T  7828085 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagtt 7827986  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  7827985 gtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaa 7827886  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  ||||||||||||||| ||||||||    
T  7827885 tcggttgaatttgtgtagaattgatgt 7827859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 6 - 232
Target Start/End: Original strand, 23150226 - 23150452
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||    
T  23150226 tcagagaagagaaaaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagtt 23150325  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||    
T  23150326 gtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtataaaa 23150425  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    | |||||||||||||||| ||||||||    
T  23150426 tttgttgaatttgtgtagaattgatgt 23150452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 6 - 232
Target Start/End: Original strand, 19655170 - 19655396
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||| ||    
T  19655170 tcagagaagagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagtt 19655269  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||    
T  19655270 gtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattagttgttaatagagtagaaaa 19655369  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  ||||||||||||||| ||||||||    
T  19655370 tccgttgaatttgtgtagaattgatgt 19655396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 18703681 - 18703451
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| || |||||||| || |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||| ||    
T  18703681 tcagagaagagaagaatcttatgagaagaggaacaatcttgtagagtccgatcatctaatttaaggtaagtgtgggactaactttctctaattctaagtt 18703582  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgt----aattggttgttaatagagtag 201  Q
     ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    |||||||||||||||||||||    
T  18703581 gtataattctgaaattgagtttagaatgttgtaggttgtagttatgggaatttgggaattagattttgaagttgtaattaattggttgttaatagagtag 18703482  T
Q  202 aaaatatgttgaatttgtgtagtattgatgt 232  Q
    |||||  ||||||||||| ||| | ||||||    
T  18703481 aaaatccgttgaatttgtatagaagtgatgt 18703451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 18709616 - 18709386
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| || |||||||| || |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||| ||    
T  18709616 tcagagaagagaagaatcttatgagaagaggaacaatcttgtagagtccgatcatctaatttaaggtaagtgtgggactaactttctctaattctaagtt 18709517  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgt----aattggttgttaatagagtag 201  Q
     ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    |||||||||||||||||||||    
T  18709516 gtataattctgaaattgagtttagaatgttgtaggttgtagttatgggaatttgggaattagattttgaagttgtaattaattggttgttaatagagtag 18709417  T
Q  202 aaaatatgttgaatttgtgtagtattgatgt 232  Q
    |||||  ||||||||||| ||| | ||||||    
T  18709416 aaaatccgttgaatttgtatagaagtgatgt 18709386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 18 - 232
Target Start/End: Original strand, 27125428 - 27125642
Alignment:
Q  18 agaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctga 117  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||| || ||||| ||| |    
T  27125428 agaattttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataagtctaa 27125527  T
Q  118 aattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaattt 217  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||| |||||||||||||||||||||  |||||||||    
T  27125528 aattgagattagcatgttgtaggttgtagttatgggaatttgggacttaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaattt 27125627  T
Q  218 gtgtagtattgatgt 232  Q
    || ||| | ||||||    
T  27125628 gtatagaagtgatgt 27125642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 68 - 232
Target Start/End: Original strand, 15890713 - 15890877
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||| ||||||||||||||||||| ||  ||||||||||||||    
T  15890713 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttttgttaatttgggaattag 15890812  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
     | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  15890813 gttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 15890877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 68 - 217
Target Start/End: Original strand, 27329982 - 27330131
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||||| ||| |||||||||||||||||| ||  || |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  27329982 aaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggcaatttgggaattag 27330081  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaattt 217  Q
     | ||||||||||||||||||||||||||||||||||||  |||||||||    
T  27330082 gttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 27330131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 68 - 217
Target Start/End: Original strand, 27390722 - 27390871
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||||| ||| |||||||||||||||||| ||  || |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  27390722 aaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggcaatttgggaattag 27390821  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaattt 217  Q
     | ||||||||||||||||||||||||||||||||||||  |||||||||    
T  27390822 gttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 27390871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 24267900 - 24267800
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24267900 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgagaattag 24267801  T
Q  168 a 168  Q
    |    
T  24267800 a 24267800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 17318105 - 17318184
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggacta 85  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17318105 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacta 17318184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 20410451 - 20410564
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||| | || ||||||||||| ||   ||    
T  20410451 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtgcgatcatctaatttaaggtaagggtggaaatagctttctctaataatgggtt 20410550  T
Q  106 atataattctgaaa 119  Q
     |||||||||||||    
T  20410551 gtataattctgaaa 20410564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 191
Target Start/End: Complemental strand, 18585854 - 18585733
Alignment:
Q  70 ggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagat 169  Q
    ||||||||||||||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || ||||||||||||| ||| ||||| |||||||| |    
T  18585854 ggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttaggaattaggt 18585755  T
Q  170 attgaagttgtaattggttgtt 191  Q
     | |||||||||||||||||||    
T  18585754 ttagaagttgtaattggttgtt 18585733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 68 - 223
Target Start/End: Complemental strand, 28948626 - 28948470
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtag-ttatgggaatttgggaatta 166  Q
    |||||||||||| |||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || ||| ||||||| || | | |||||||||||||    
T  28948626 aaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaactggatttaacaagtggtaagttgtaggttttagaaatttgggaatta 28948527  T
Q  167 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtag 223  Q
    | | | |||||||||||||||||||   | |||||||||||||||||||| ||||||    
T  28948526 ggtttagaagttgtaattggttgttttaatagtagaaaatatgttgaattggtgtag 28948470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 18928732 - 18928614
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    ||||||||||| ||||||||||||||||||| ||| |  ||||||||||||| |||| |||| || ||||||||||| |||| ||||||||||| |||||    
T  18928732 aaggtaagggtaggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatta 18928633  T
Q  167 gatattgaagttgtaattg 185  Q
    | | | |||||||||||||    
T  18928632 ggtttagaagttgtaattg 18928614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 72 - 206
Target Start/End: Complemental strand, 19235170 - 19235037
Alignment:
Q  72 taagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatat 171  Q
    ||||||||||| ||||||||||||||| ||  || ||||||||||||||||| ||||| ||||||| | ||||   | || ||||||||| ||||| | |    
T  19235170 taagggtgggattaactttctctaattttaggttgtataattctgaaattgattttaggatgttgttgtttgtgaatttgtgaatttggg-attaggttt 19235072  T
Q  172 tgaagttgtaattggttgttaatagagtagaaaat 206  Q
    |||||| ||||||||||||||||| ||||||||||    
T  19235071 tgaagtcgtaattggttgttaataaagtagaaaat 19235037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 222
Target Start/End: Original strand, 30673403 - 30673550
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||| ||||||||||||||| ||  || ||||||| ||||||||||||||||||| ||| | ||||        |||||| ||||||||    
T  30673403 aaggtaagggtgggattaactttctctaattttaggttgtataattttgaaattgagtttagcatgatgttgtttgt--------gaattttggaattag 30673494  T
Q  168 atattgaagttgtaa-ttggttgttaatagagtagaaaatatgttgaatttgtgta 222  Q
     | ||||| | |||| ||||||||||||||||||||||||   |||||||||||||    
T  30673495 gttttgaattagtaatttggttgttaatagagtagaaaattcattgaatttgtgta 30673550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 222
Target Start/End: Original strand, 19167926 - 19167992
Alignment:
Q  156 tttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgta 222  Q
    |||||||||||| | ||||||| ||||||||||||||||||||||||||||   |||||||||||||    
T  19167926 tttgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatttgtgta 19167992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 19401145 - 19401028
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||||||||||| ||| |||||| ||| |  ||| ||||||||| |||| |||| || |||||||||||||||| |||||||||| ||||||    
T  19401145 aaggtaagggtgggactaaccttcactaattctaagtg-tatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgagaatta 19401047  T
Q  167 gatattgaagttgtaattg 185  Q
    | | |  ||||||||||||    
T  19401046 ggtttataagttgtaattg 19401028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 19825447 - 19825516
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    ||||||| ||||||||| |||||| |||||||||||||  |||||||||||| ||||| |||||||||||    
T  19825447 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagactagctttctctaat 19825516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 31734820 - 31734708
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| ||||| |||||| ||||||||||| ||||||||||||||||| |||||   |||   |||||||||||||||||||| |||| |||| || || |    
T  31734820 tcagagaagaaaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaggtaagggtgggactaaccttctttaatcat-aagt 31734722  T
Q  106 atataattctgaaa 119  Q
    || |||||||||||    
T  31734721 atgtaattctgaaa 31734708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 31731905 - 31732005
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||||||||||||||||| |||| ||| |  |||||||||| ||||||  |||  || |||||||||||||||| |||| ||||| ||||||    
T  31731905 aaggtaagggtgggactaactttctccaattctaagtgttataattctgaaaattggatttgacaagttgtaggttgtagttttggggatttgagaatta 31732004  T
Q  167 g 167  Q
    |    
T  31732005 g 31732005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 25922092 - 25922033
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaac 87  Q
    ||||||| ||||||||| |||||| |||||||||||||  ||||||||||||||||||||    
T  25922092 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggactaac 25922033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 68 - 142
Target Start/End: Original strand, 27572123 - 27572198
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcat-gttgtaggtt 142  Q
    |||||||||||| |||||||||||||||||| ||| |  ||||||||||||||||| |||| ||| ||||||||||    
T  27572123 aaggtaagggtgagactaactttctctaattctaagtcgtataattctgaaattgaatttaacatggttgtaggtt 27572198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 102
Target Start/End: Original strand, 23431420 - 23431482
Alignment:
Q  40 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataa 102  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||||| |||| |||| ||||    
T  23431420 aatcttgtagagtccgatcatctaatctaaggtaagcgtgggactaaccttctttaatcataa 23431482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 15998940 - 15998880
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagttta 128  Q
    |||||||||||| |||||||||||||||||| ||| || |||||||||||||  |||||||    
T  15998940 aaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaaagagttta 15998880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 24550169 - 24550249
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagtt 148  Q
    |||||||||||||||||||  |||| ||||| ||| || | ||||||||||||||  |||| ||||||||||| |||||||    
T  24550169 aaggtaagggtgggactaaacttctttaattgtaagttgtgtaattctgaaattggatttaacatgttgtaggatgtagtt 24550249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 19167854 - 19167923
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgt 137  Q
    ||||||||||||| | ||||||| ||||||  ||  || ||||||||||| |||||||||||||||||||    
T  19167854 aaggtaagggtggaattaactttgtctaatattaggttgtataattctgatattgagtttagcatgttgt 19167923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 10446310 - 10446239
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccga--tcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    ||||||| |||||| | ||||||||| ||  |||||||||  |||||||||||||||||| |||||||||||    
T  10446310 gagaagaggagcaagcatgtagagtctgaaatcatctaatctaaggtaagggtgggactagctttctctaat 10446239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 12041621 - 12041672
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    |||||||||||||||||||| |||| ||||| ||| || |||||||||||||    
T  12041621 aaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaa 12041672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 189
Target Start/End: Complemental strand, 23501723 - 23501601
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaat-tgagtttagcatgttgtaggttgtagttatgggaa-tttgggaatt 165  Q
    |||||||||||| ||||||| |||  ||||| |||||  | |||||||||||  ||| |||| || |||||||||||||||| | |||| ||||||||||    
T  23501723 aaggtaagggtgagactaaccttcaataattctaaatgtt-taattctgaaaactgaatttaacaagttgtaggttgtagtttttggaaatttgggaatt 23501625  T
Q  166 agatattgaagttgtaattggttg 189  Q
    || | | |||||||||||| ||||    
T  23501624 aggtttagaagttgtaatttgttg 23501601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 13285841 - 13285748
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccgat--catctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||| |||||| ||||||||||| ||   ||||||||  |||||||||||||||||||| |||| |||| || | ||  ||||||||||||    
T  13285841 gagaagaggagcaagcttgtagagtctgaaaccatctaatctaaggtaagggtgggactaaccttctataatcatgagtttcataattctgaaa 13285748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 175; Significance: 3e-94; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 25091766 - 25091540
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||    
T  25091766 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcatctaatttaaggtaagggtgggactaactttctctaattctaagtt 25091667  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  25091666 gtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaa 25091567  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  ||||||||||||||| ||||||||    
T  25091566 tccgttgaatttgtgtagaattgatgt 25091540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 6 - 232
Target Start/End: Original strand, 53630413 - 53630639
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| ||| |||||||| ||||||||||| || ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||| ||    
T  53630413 tcagagaaaagaagaatcttgtgagaagaggaacaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagtt 53630512  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  53630513 gtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaa 53630612  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  ||||||||||||||| ||||||||    
T  53630613 ttcgttgaatttgtgtagaattgatgt 53630639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 6 - 232
Target Start/End: Original strand, 10356375 - 10356601
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||| ||||| | ||||| ||||||||| ||||||||||||||||||||| ||| ||    
T  10356375 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcttttaatttaaggtaaggttgggactaactttctctaattctaagtt 10356474  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||    
T  10356475 gtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggtagttaatagagtagaaaa 10356574  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  ||||||||||||||| ||||||||    
T  10356575 tccgttgaatttgtgtagaattgatgt 10356601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 16998638 - 16998412
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| |||||||||||  | ||||   ||||||||||||||||||||| |||||||| ||| |||||||||||||||||| ||| ||    
T  16998638 tcagagaagagaagaatcttgtgagaagagaaacaattccgtagagtccgatcatctaatttaaggtaagagtgagactaactttctctaattctaagtt 16998539  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  16998538 gtataattatgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaa 16998439  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  ||||||||||||||||||||||||    
T  16998438 ttcgttgaatttgtgtagtattgatgt 16998412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 42875910 - 42875684
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| ||||||| |||||||||| ||| |||||||| ||||||||||||||||||||||| | ||||| ||| ||    
T  42875910 tcagagaagagaagaatcttgtgagaagaggagcaattttgtagagtctgattatctaatttaaggtaagggtgggactaactttatataattctaagtt 42875811  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| |||||||||||||||||||    
T  42875810 gtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaaataggttttgaagttgtaattgattgttaatagagtagaaaa 42875711  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  ||||||||||||||| ||||||||    
T  42875710 tccgttgaatttgtgtagaattgatgt 42875684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 12 - 232
Target Start/End: Complemental strand, 19610431 - 19610211
Alignment:
Q  12 aagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataa 111  Q
    ||||||||||| ||||||||||| ||| ||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||| ||| || |||||    
T  19610431 aagagaagaatcttgtgagaagaggagtaatcttgtagaatccgatcatctaatttaaggtaagggtgagactaactttctctaattttaagttgtataa 19610332  T
Q  112 ttctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgtt 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||  | |||| |||||||||||||||||||||||||||||||  |||    
T  19610331 ttctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgagaattaagttttgacgttgtaattggttgttaatagagtagaaaatccgtt 19610232  T
Q  212 gaatttgtgtagtattgatgt 232  Q
     ||||||||||| ||||||||    
T  19610231 aaatttgtgtagaattgatgt 19610211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 45 - 237
Target Start/End: Complemental strand, 11426017 - 11425825
Alignment:
Q  45 tgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgt 144  Q
    ||||||| |||||||||  ||| ||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||    
T  11426017 tgtagagaccgatcatcatatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgt 11425918  T
Q  145 agttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgtccatc 237  Q
    ||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||  ||||||||||||||| |||||||| ||||    
T  11425917 agttatgggaatttgggaattaggttttgaaattgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgttcatc 11425825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 68 - 232
Target Start/End: Complemental strand, 15115273 - 15115109
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  15115273 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattat 15115174  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
     | |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  15115173 tttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 15115109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 68 - 228
Target Start/End: Complemental strand, 37019721 - 37019561
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||||||||| |||||||||||||||||| ||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  37019721 aaggtaagggtgtgactaactttctctaattttaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgagaattag 37019622  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattg 228  Q
     | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  37019621 gttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattg 37019561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 71 - 218
Target Start/End: Original strand, 6633541 - 6633688
Alignment:
Q  71 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 170  Q
    |||||||||||||||||||||||||||| ||  || ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| |     
T  6633541 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 6633640  T
Q  171 ttgaagttgtaattggttgttaatagagtagaaaatatgttgaatttg 218  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  6633641 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg 6633688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 71 - 218
Target Start/End: Original strand, 46001535 - 46001682
Alignment:
Q  71 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 170  Q
    ||||||||| |||||||||||||||||| ||  || ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| |     
T  46001535 gtaagggtgagactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 46001634  T
Q  171 ttgaagttgtaattggttgttaatagagtagaaaatatgttgaatttg 218  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  46001635 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg 46001682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 10694184 - 10694297
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||| ||| |     
T  10694184 tcagagaagagaagaatctcgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaaatttctctaattctaagta 10694283  T
Q  106 atataattctgaaa 119  Q
    || |||||||||||    
T  10694284 atttaattctgaaa 10694297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 10907950 - 10908063
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||| ||| |     
T  10907950 tcagagaagagaagaatctcgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaaatttctctaattctaagta 10908049  T
Q  106 atataattctgaaa 119  Q
    || |||||||||||    
T  10908050 atttaattctgaaa 10908063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 12424229 - 12424342
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||   ||    
T  12424229 tcagagaagagaagaatcttgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggtt 12424328  T
Q  106 atataattctgaaa 119  Q
     |||||||||||||    
T  12424329 gtataattctgaaa 12424342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 25513964 - 25513851
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||||| |||||||||||  ||||||| |||||||||| ||||||||||| || | ||    
T  25513964 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtctgatcatctaatctaaggtaatggtgggactagctttctctaataatgagtt 25513865  T
Q  106 atataattctgaaa 119  Q
     |||||||||||||    
T  25513864 gtataattctgaaa 25513851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 9639118 - 9639010
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatata 110  Q
    |||||||||||| ||||||||||| ||| |||||||||||||||||| |||||||  |||||||||||||||||| ||||||||||| || | || | ||    
T  9639118 gaagagaagaatcttgtgagaagaggagaaatcttgtagagtccgataatctaatctaaggtaagggtgggactagctttctctaataatgagttgtgta 9639019  T
Q  111 attctgaaa 119  Q
    |||||||||    
T  9639018 attctgaaa 9639010  T

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Target: chr4; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 40230419 - 40230323
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataa 102  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||| | ||||||||||  ||||||||||||||||||||||||| |||| ||||    
T  40230419 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcaatcatctaatctaaggtaagggtgggactaactttctttaatcataa 40230323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 19022457 - 19022366
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    |||| |||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||| |||||||||||||||||    
T  19022457 tcagagaagagaataatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatctaaggtaaaggtgagactaactttctctaat 19022366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 68 - 187
Target Start/End: Complemental strand, 9924205 - 9924085
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||| |||||||||||||||||| ||| |  ||||||||||||| |||| |||| || ||||||||||| |||| ||||||||||| |||||    
T  9924205 aaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatta 9924106  T
Q  167 gatattgaagttgtaattggt 187  Q
    | | | |||||||||||||||    
T  9924105 ggtttagaagttgtaattggt 9924085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 14549811 - 14549695
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||||||||| |||||||||||||||||| ||| || |||  |||||||| ||  |||| || || ||||||||||||| ||| ||||||||||||||    
T  14549811 aaggtaagggtgagactaactttctctaattctaagttgtatgtttctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaattag 14549712  T
Q  168 atattgaagttgtaatt 184  Q
     | | ||||||||||||    
T  14549711 gtttagaagttgtaatt 14549695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 19434560 - 19434658
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    ||||||||||||||||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || ||||||||||||| | | |||||||||||||    
T  19434560 aaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtttttgaaatttgggaatta 19434658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 15613141 - 15613061
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagtt 148  Q
    |||||||||||||||||||| |||| ||||| ||| || ||||||||||||||||  |||| ||||||||||| |||||||    
T  15613141 aaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattggatttaacatgttgtaggatgtagtt 15613061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 9870449 - 9870568
Alignment:
Q  72 taagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttggg-aattagat 169  Q
    ||||||||||||||||||||  ||||| ||| || |||||||||| ||||||  |||  |||| |||||||||||||| |||||||||||| ||||||      
T  9870449 taagggtgggactaactttccataattctaagttgtataattctgaaaattggatttgacatgatgtaggttgtagttttgggaatttgggaaattaggg 9870548  T
Q  170 attgaagttgtaattggttg 189  Q
     | |||||||||||||||||    
T  9870549 ttagaagttgtaattggttg 9870568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 33186986 - 33186903
Alignment:
Q  36 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||| ||||||||||||||||||||||| |||||| ||||| ||||| ||||||||||| ||   || |||||||||||||    
T  33186986 gagcaattttgtagagtccgatcatctaatttaaggtaggggtgagactagctttctctaataatgggttgtataattctgaaa 33186903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 11478654 - 11478772
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||| ||||||||| |||||||| ||| |  |||||||||| ||||||| |||| || ||||||| ||| |||| ||||||||||| |||||    
T  11478654 aaggtaagggtgagactaacttcctctaattctaagtggtataattctgaaaattgaatttaacaagttgtagattgaagttttgggaatttggaaatta 11478753  T
Q  167 gatattgaagttgtaattg 185  Q
    | | | ||| |||||||||    
T  11478754 ggtttagaacttgtaattg 11478772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 21247 - 21147
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    ||||||||| || ||||||| |||| ||||| ||| || ||||||||||| |||||| |||| ||||||||||||||||||| || | ||||| ||||||    
T  21247 aaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaatta 21148  T
Q  167 g 167  Q
    |    
T  21147 g 21147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 26921708 - 26921760
Alignment:
Q  154 aatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaat 206  Q
    |||||||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  26921708 aatttgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaat 26921760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 51993612 - 51993532
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagtt 148  Q
    |||||||||||||||||||| |||| ||||| ||| || | ||||||||||||||  |||| ||||||||||| |||||||    
T  51993612 aaggtaagggtgggactaaccttctttaattctaagttgtgtaattctgaaattggatttaacatgttgtaggatgtagtt 51993532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 44023546 - 44023638
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataa 102  Q
    |||| |||||||||||| |||||| |||| |||||||||||||||||||||||    |||  |||||||||||| ||||||| |||| |||| ||||    
T  44023546 tcagagaagagaagaatcttgtgaaaagaggagcaatcttgtagagtccgatc----aatctaaggtaagggtgcgactaaccttctttaatcataa 44023638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 102
Target Start/End: Original strand, 33243267 - 33243329
Alignment:
Q  40 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataa 102  Q
    ||||||||||||||| ||||||||||  |||||||||||| ||||||| |||| |||| ||||    
T  33243267 aatcttgtagagtcccatcatctaatctaaggtaagggtgagactaacattctttaatcataa 33243329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 2424374 - 2424439
Alignment:
Q  54 cgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    |||||||||||   |||||||||||| |||||||||||||||||| ||| || ||||||| |||||    
T  2424374 cgatcatctaacctaaggtaagggtgagactaactttctctaattctaagttgtataattttgaaa 2424439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 10273476 - 10273405
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccga--tcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    ||||||| |||||| ||||||||||| ||  || ||||||  |||||||||||||||||| |||||||||||    
T  10273476 gagaagaggagcaagcttgtagagtctgaaatcgtctaatctaaggtaagggtgggactagctttctctaat 10273405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 15009014 - 15008963
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||||||||||||||||||||||||||| ||| |  | |||||||||||    
T  15009014 aaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 15008963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 16296989 - 16296938
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    |||||||||||||||||| ||||||||||| || | || |||||||||||||    
T  16296989 aaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 16296938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 166
Target Start/End: Complemental strand, 21062692 - 21062593
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    ||||||||||||||||||||||||||||||| ||| |  ||||| | || ||||||  |||| || || ||||||||||||| || | ||||| ||||||    
T  21062692 aaggtaagggtgggactaactttctctaattctaagtgttataactatgaaaattggatttaacaagtggtaggttgtagttttgaggatttgagaatta 21062593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 35811377 - 35811428
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||||||||||||||||||||||||||| ||| |  ||||||| |||||    
T  35811377 aaggtaagggtgggactaactttctctaattctaagtggtataattttgaaa 35811428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 175; Significance: 3e-94; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 19676824 - 19676598
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||    
T  19676824 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagtt 19676725  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  19676724 gtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaa 19676625  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  ||||||||||||||| ||||||||    
T  19676624 tccgttgaatttgtgtagaattgatgt 19676598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 11 - 232
Target Start/End: Original strand, 21045993 - 21046214
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatata 110  Q
    |||||||||||| ||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| || ||||    
T  21045993 gaagagaagaatcttgtgagaagaggtgcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtata 21046092  T
Q  111 attctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||  ||    
T  21046093 attctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgt 21046192  T
Q  211 tgaatttgtgtagtattgatgt 232  Q
    ||||||||||||| ||||||||    
T  21046193 tgaatttgtgtagaattgatgt 21046214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 6 - 232
Target Start/End: Original strand, 20633570 - 20633799
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||| ||| ||    
T  20633570 tcagagaagagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaacttgctctaattctaagtt 20633669  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtag---ttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtaga 202  Q
     |||||||||||||||||||||||||||||||||||| |||   ||||||||||||||||||||| | ||||||||||||||||||||||||||| || |    
T  20633670 gtataattctgaaattgagtttagcatgttgtaggttatagttattatgggaatttgggaattaggttttgaagttgtaattggttgttaatagaataaa 20633769  T
Q  203 aaatatgttgaatttgtgtagtattgatgt 232  Q
    ||||| ||||||||||||||| ||||||||    
T  20633770 aaataagttgaatttgtgtagaattgatgt 20633799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 40 - 232
Target Start/End: Original strand, 16058287 - 16058478
Alignment:
Q  40 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtag 139  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||||||||||||||||    
T  16058287 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 16058386  T
Q  140 gttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
    ||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| | ||||||    
T  16058387 gttgtagttatggaaatttgggaattaggt-ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 16058478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 68 - 232
Target Start/End: Complemental strand, 42913100 - 42912936
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||||||||| |||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  42913100 aaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttgtgggaatttaggaattag 42913001  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
     | |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  42913000 gttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 42912936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 41225393 - 41225489
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataa 102  Q
    |||| |||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||| |||||||||||||||||||| |||| |||| ||||    
T  41225393 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtcgagtacgatcatctaatttaaggtaagggtgggactaaccttctttaatcataa 41225489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 41226646 - 41226742
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataa 102  Q
    |||| |||||||||||| ||||||||||| |||||||||||| |||| ||||||||||||| |||||||||||||||||||| |||| |||| ||||    
T  41226646 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtcgagtacgatcatctaatttaaggtaagggtgggactaaccttctttaatcataa 41226742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 20588746 - 20588660
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    ||||||||||||  |||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||| || |||||||||||    
T  20588746 gaagagaagaatactgtgagaagaggagcaatcttgtagagtccgatcatccaatttaaggtaagggtgggattagctttctctaat 20588660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 20593284 - 20593198
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    ||||||||||||  |||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||| || |||||||||||    
T  20593284 gaagagaagaatactgtgagaagaggagcaatcttgtagagtccgatcatccaatttaaggtaagggtgggattagctttctctaat 20593198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 119
Target Start/End: Original strand, 28476673 - 28476786
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||| ||||||| ||||||||||| ||||||||||| |||||||| |||||||||  ||||||||||||||||||  |||||||||| || | ||    
T  28476673 tcagagaagggaagaatcttgtgagaagaggagcaatcttgcagagtccggtcatctaatctaaggtaagggtgggactagatttctctaataatgagtt 28476772  T
Q  106 atataattctgaaa 119  Q
     |||||||||||||    
T  28476773 gtataattctgaaa 28476786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 13302953 - 13302853
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||| |||||||||||||||||| ||| |  ||||||||||||| |||| |||| || |||||||||||||||| |||||||||||||||||    
T  13302953 aaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaatta 13302854  T
Q  167 g 167  Q
    |    
T  13302853 g 13302853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 191
Target Start/End: Original strand, 24723352 - 24723475
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||||||||||||||||||| ||| || ||| ||||||||| ||| |||| || || |||| |||||||| ||| |||||| ||||||     
T  24723352 aaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactgaatttaacaggtggtagattgtagttttggaaatttgagaattat 24723451  T
Q  168 atattgaagttgtaattggttgtt 191  Q
     | | |||||||||||||||||||    
T  24723452 gtttagaagttgtaattggttgtt 24723475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 68 - 223
Target Start/End: Complemental strand, 51324555 - 51324400
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||||||||| ||||||||||| |||||| ||| || ||| ||||||||| ||  |||| || || ||||||||||||| |||||| |||||||||||    
T  51324555 aaggtaagggtgagactaactttccctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttgggaaattgggaattag 51324456  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtag 223  Q
     | |  ||||||||||||||||||   | |||||||||| | ||||||| ||||||    
T  51324455 gtttaaaagttgtaattggttgttttaatagtagaaaatctattgaattggtgtag 51324400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 12710980 - 12710889
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    |||| |||||||||||| || |||||||| ||||||||||||||||||| ||||||||||  ||||||| | |||||||| |||||||||||    
T  12710980 tcagagaagagaagaatcttatgagaagaggagcaatcttgtagagtcccatcatctaatctaaggtaaagatgggactagctttctctaat 12710889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 15 - 167
Target Start/End: Complemental strand, 22350815 - 22350668
Alignment:
Q  15 agaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattc 114  Q
    |||||||| || ||||| || ||||||||||||||||||||||||    ||  |||||||||||||||||||| |||  ||||| | | | |||| ||||    
T  22350815 agaagaatcttatgaga-gaggagcaatcttgtagagtccgatca----atctaaggtaagggtgggactaaccttcaataattctgagt-atatgattc 22350722  T
Q  115 tgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||| |||| |||| || |||||||||||||||| ||||||||||||||||||    
T  22350721 tgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaattag 22350668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 191
Target Start/End: Original strand, 7051923 - 7052046
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || |||| || ||||| | | ||||||||||||||    
T  7051923 aaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattttagttttagaaatttgggaattag 7052022  T
Q  168 atattgaagttgtaattggttgtt 191  Q
     | | ||| |||||||||||||||    
T  7052023 gtttagaaattgtaattggttgtt 7052046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 222
Target Start/End: Complemental strand, 21168984 - 21168831
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||| | ||||||||||||||| ||  || ||||||||| ||||||||||||||||||||| | ||||   | || |||||||||||| ||    
T  21168984 aaggtaagggtggaattaactttctctaattttaggttgtataattctaaaattgagtttagcatgttgttgtttgtgaatttgtgaatttgggaataag 21168885  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgta 222  Q
     | ||||| | ||  || ||| |||||||||||||||||   |||||||||||||    
T  21168884 gttttgaattagt-ttttgtttttaatagagtagaaaatccattgaatttgtgta 21168831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 8306697 - 8306628
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    ||||||| ||||||||| |||||| |||||||||||||  |||||||| ||||||||| |||||||||||    
T  8306697 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagagtgggactagctttctctaat 8306628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 42697835 - 42697735
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||| ||||||| |||| ||||| ||| || ||||||||||| |||||  |||| ||||||||||||||||||| || | ||||| ||||||    
T  42697835 aaggtaagggtgagactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggttgtagttttgaggatttgagaatta 42697736  T
Q  167 g 167  Q
    |    
T  42697735 g 42697735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 45755571 - 45755471
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||| ||||||| |||| ||||||||| |||||| |||||| ||| ||  |||| || |||||||||||||||| || ||||||| ||||||    
T  45755571 aaggtaagggtgagactaaccttctttaattataagttatatgattctgaaaagtggatttaacaagttgtaggttgtagttttgagaatttgagaatta 45755472  T
Q  167 g 167  Q
    |    
T  45755471 g 45755471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 4595854 - 4595944
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatt 157  Q
    |||||||||||| |||||||||||||||||| |||    |||||||||| |||| || |||| || |||||||||||||||| ||||||||    
T  4595854 aaggtaagggtgagactaactttctctaattctaagaggtataattctgaaaatcgaatttaacaagttgtaggttgtagttttgggaatt 4595944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 189
Target Start/End: Original strand, 7320595 - 7320716
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||||||||||| | | |||||| ||| |  ||| ||||||||| |||| |||| || ||||||| |||||||| |||||||||||||||||    
T  7320595 aaggtaagggtgggactaacctacactaattctaagtg-tattattctgaaaattgaatttaacaggttgtagattgtagttttgggaatttgggaatta 7320693  T
Q  167 gatattgaagttgtaattggttg 189  Q
      | | || ||||||||||||||    
T  7320694 tgtttagatgttgtaattggttg 7320716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 21239050 - 21239130
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagtt 148  Q
    |||||| |||||||||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || |||||||||||||    
T  21239050 aaggtatgggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtt 21239130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 191
Target Start/End: Original strand, 44822022 - 44822145
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||| ||||||||||| |||  ||||| | | |||||| ||| ||||| |||  |||| || || ||||||||||||| ||| |||||||||||||    
T  44822022 aaggtaagagtgggactaaccttcaataattctga-ttatatgattatgaaaattggatttaacaggtggtaggttgtagttctggaaatttgggaatta 44822120  T
Q  167 gatattgaagttgtaattggttgtt 191  Q
    | | | |||||||||||||||||||    
T  44822121 ggtttagaagttgtaattggttgtt 44822145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 46197746 - 46197797
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||||||||||||||||||||||||||| ||| | || |||||||||||    
T  46197746 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 46197797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 51336530 - 51336479
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||||||||||||||||||||||||||| ||| || ||| |||||||||    
T  51336530 aaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaa 51336479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 12327744 - 12327795
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    |||||||||||| |||||||||||||||||| ||| || ||| |||||||||    
T  12327744 aaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaa 12327795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 29763633 - 29763684
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||||||||||||||||||||||||||| ||| |  | |||||||||||    
T  29763633 aaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 29763684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 45499439 - 45499374
Alignment:
Q  71 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgt 137  Q
    |||||||||| | ||||| ||||||||| ||  || |||||||||||||||||||||||||| ||||    
T  45499439 gtaagggtgg-attaactctctctaattttaggttgtataattctgaaattgagtttagcatattgt 45499374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 11946453 - 11946392
Alignment:
Q  107 tataattctgaaattgagtttagcatgttgtaggttgtagttatg-ggaatttgggaattag 167  Q
    ||||||||||||||||  |||| ||||||||||||| ||||| || ||| ||||||||||||    
T  11946453 tataattctgaaattggatttaacatgttgtaggttatagttttgaggattttgggaattag 11946392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 97
Target Start/End: Original strand, 22145667 - 22145696
Alignment:
Q  68 aaggtaagggtgggactaactttctctaat 97  Q
    ||||||||||||||||||||||||||||||    
T  22145667 aaggtaagggtgggactaactttctctaat 22145696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 173; Significance: 4e-93; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 11 - 235
Target Start/End: Original strand, 5031073 - 5031297
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatata 110  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||| || ||||    
T  5031073 gaagagaagaatcttgtgagaagatgagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtata 5031172  T
Q  111 attctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||  ||    
T  5031173 attctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtataaaattcgt 5031272  T
Q  211 tgaatttgtgtagtattgatgtcca 235  Q
    ||||||||||||| | |||||||||    
T  5031273 tgaatttgtgtagaagtgatgtcca 5031297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 11 - 232
Target Start/End: Original strand, 24780784 - 24781005
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatata 110  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| || ||||    
T  24780784 gaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtata 24780883  T
Q  111 attctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgt 210  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  ||    
T  24780884 attctgaaattgagtttagcatgaagtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgt 24780983  T
Q  211 tgaatttgtgtagtattgatgt 232  Q
    ||||||||||||| | ||||||    
T  24780984 tgaatttgtgtagaagtgatgt 24781005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 24436761 - 24436535
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||| ||| ||    
T  24436761 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaactttctcgaattctaagtt 24436662  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||| ||||||||||||||||||||    
T  24436661 gtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaattagttgttaatagagtagaaaa 24436562  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  ||||||||||||||| ||||||||    
T  24436561 tccgttgaatttgtgtagaattgatgt 24436535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 9976042 - 9975816
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| || |||||||| || |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| ||    
T  9976042 tcagagaagagaagaatcttatgagaagaggaacaatcttgtagagtccgatcatctaatttaaggtaagggttggactaactttctctaattctaagtt 9975943  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||    
T  9975942 gtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagacaa 9975843  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  | ||||||||||||| ||||||||    
T  9975842 tccgctgaatttgtgtagaattgatgt 9975816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 6 - 219
Target Start/End: Original strand, 22251387 - 22251600
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| ||| |||||||||||||| |||||||||||| ||||||||||||  ||||| ||||||||||| ||| ||    
T  22251387 tcagagaagagaagaatcttgtgagaagaggagtaatcttgtagagtctgatcatctaatttaaggtaagggtgaaactaattttctctaattctaagtt 22251486  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  22251487 gtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaa 22251586  T
Q  206 tatgttgaatttgt 219  Q
    | ||||||||||||    
T  22251587 tctgttgaatttgt 22251600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 28 - 232
Target Start/End: Complemental strand, 17307577 - 17307373
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagttt 127  Q
    ||||||| ||||||  | |||||| |||||||||||||  ||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||    
T  17307577 gagaagaggagcaaaatcgtagagaccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 17307478  T
Q  128 agcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtatt 227  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||    
T  17307477 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaatt 17307378  T
Q  228 gatgt 232  Q
    |||||    
T  17307377 gatgt 17307373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 12 - 232
Target Start/End: Original strand, 2523692 - 2523912
Alignment:
Q  12 aagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataa 111  Q
    ||||||| ||| ||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||| || |||||    
T  2523692 aagagaaaaatcttgtgagaagaggagcaatcttgtaaagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataa 2523791  T
Q  112 ttctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgtt 211  Q
    |||| |||||||||||| |||||||||||||||| |||||||||||||| |||||| | || || |||||||||||| |||||||||||||||||  |||    
T  2523792 ttcttaaattgagtttaacatgttgtaggttgtatttatgggaatttggaaattaggtttttaaattgtaattggttattaatagagtagaaaattcgtt 2523891  T
Q  212 gaatttgtgtagtattgatgt 232  Q
    ||||||||| || ||||||||    
T  2523892 gaatttgtgcagaattgatgt 2523912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 68 - 232
Target Start/End: Complemental strand, 24516237 - 24516073
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24516237 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaattag 24516138  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
     | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  24516137 gttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 24516073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 68 - 232
Target Start/End: Complemental strand, 40912371 - 40912207
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40912371 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 40912272  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
     | ||||||||||| ||||||||||||||||||||||||  ||||||||||||||| | ||||||    
T  40912271 gttttgaagttgtagttggttgttaatagagtagaaaattcgttgaatttgtgtagaaatgatgt 40912207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 54 - 232
Target Start/End: Original strand, 19201187 - 19201365
Alignment:
Q  54 cgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatggg 153  Q
    |||||||||||   ||| |||||||| |||||||||||||||||| ||| || |||||||||||||||||||||| ||||||||||||||||||||| ||    
T  19201187 cgatcatctaacctaagttaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttatcatgttgtaggttgtagttatagg 19201286  T
Q  154 aatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||    
T  19201287 aatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgggtagaattgatgt 19201365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 107 - 232
Target Start/End: Original strand, 27484517 - 27484642
Alignment:
Q  107 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaat 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||    
T  27484517 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaaaat 27484616  T
Q  207 atgttgaatttgtgtagtattgatgt 232  Q
      ||||||||||||||| ||||||||    
T  27484617 ccgttgaatttgtgtagaattgatgt 27484642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 71 - 218
Target Start/End: Complemental strand, 37270747 - 37270600
Alignment:
Q  71 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 170  Q
    |||||||||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||  |     
T  37270747 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgagaattaagtt 37270648  T
Q  171 ttgaagttgtaattggttgttaatagagtagaaaatatgttgaatttg 218  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||||    
T  37270647 ttgaagttgtaatgggttgttaatagagtagaaaatccgttgaatttg 37270600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 115 - 232
Target Start/End: Complemental strand, 36841268 - 36841151
Alignment:
Q  115 tgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaa 214  Q
    |||||||||||||| ||||||||||||||||||||||||||||| | |||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  36841268 tgaaattgagtttaacatgttgtaggttgtagttatgggaatttagaaattaggttttgaagttgtaattggttgttaatagagtagaaaatatgttgaa 36841169  T
Q  215 tttgtgtagtattgatgt 232  Q
    ||||||||| ||||||||    
T  36841168 tttgtgtagaattgatgt 36841151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 6 - 181
Target Start/End: Complemental strand, 27852777 - 27852605
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| |||||| |||| ||||| ||||||||||||||||||    ||  ||||||||||||||||||||||||||||||| ||| |     
T  27852777 tcagagaagagaagaatcttgtgaaaagaggagcattcttgtagagtccgatca----atctaaggtaagggtgggactaactttctctaattctaagtg 27852682  T
Q  106 atataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgta 181  Q
     ||||||||||||| |||| |||| || |||||||||||| ||| |||||||||||||||||||| | |||||||||    
T  27852681 gtataattctgaaaattgaatttaacaagttgtaggttgttgttttgggaatttgggaattagatttagaagttgta 27852605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 68 - 189
Target Start/End: Complemental strand, 25142255 - 25142133
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    ||||||||||||||||||||||||||||||| ||| |  ||||||||||||| |||| |||| || |||||||||||||||| |||||||||||||||||    
T  25142255 aaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaatta 25142156  T
Q  167 gatattgaagttgtaattggttg 189  Q
    | | | |||||||||||||||||    
T  25142155 ggtttagaagttgtaattggttg 25142133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 21369406 - 21369316
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaa 96  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| | ||||||||||    
T  21369406 tcagagaagagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatctaaggtaagggtgggacaagctttctctaa 21369316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 40 - 191
Target Start/End: Complemental strand, 22502050 - 22501897
Alignment:
Q  40 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgta 138  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||| | || ||||||||| |||||  |||| ||||||||     
T  22502050 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtg 22501951  T
Q  139 ggttgtagttatgggaatttggg-aattagatattgaagttgtaattggttgtt 191  Q
    |||||||||| |  ||||||||| ||||||   | |||||||| ||||||||||    
T  22501950 ggttgtagttttatgaatttgggaaattagggttagaagttgtgattggttgtt 22501897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 40 - 191
Target Start/End: Complemental strand, 22509984 - 22509831
Alignment:
Q  40 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgta 138  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||| | || ||||||||| |||||  |||| ||||||||     
T  22509984 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtg 22509885  T
Q  139 ggttgtagttatgggaatttggg-aattagatattgaagttgtaattggttgtt 191  Q
    |||||||||| |  ||||||||| ||||||   | |||||||| ||||||||||    
T  22509884 ggttgtagttttatgaatttgggaaattagggttagaagttgtgattggttgtt 22509831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 68 - 216
Target Start/End: Complemental strand, 3539888 - 3539740
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    ||||||||||||||||||||||||||||||| ||| |  |||||||||| |||| || |||| || |||||||||||||||| | |||||||| ||||||    
T  3539888 aaggtaagggtgggactaactttctctaattttaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagtttttggaatttgagaatta 3539789  T
Q  167 gatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatt 216  Q
    | | | ||||||||||||||||| |   ||||||| ||||||||||||||    
T  3539788 ggtttagaagttgtaattggttgatttaagagtag-aaatatgttgaatt 3539740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 191
Target Start/End: Complemental strand, 357932 - 357809
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || ||||||||||||| | | ||||||||||||||    
T  357932 aaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtttttgaaatttgggaattag 357833  T
Q  168 atattgaagttgtaattggttgtt 191  Q
     | | |||||||||||||||||||    
T  357832 gtttagaagttgtaattggttgtt 357809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 1383545 - 1383667
Alignment:
Q  69 aggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaga 168  Q
    ||||||||||| |||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || ||||||||||||| ||| ||||||||||||||     
T  1383545 aggtaagggtgagactaactttctctaattctaagttgtatcattctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaattagg 1383644  T
Q  169 tattgaagttgtaattggttgtt 191  Q
    | | |||||||||||||||||||    
T  1383645 tttagaagttgtaattggttgtt 1383667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 36841340 - 36841267
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtg 79  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  36841340 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 36841267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 101
Target Start/End: Complemental strand, 31521282 - 31521187
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattata 101  Q
    |||| |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||| | |||||||||| | |||||||||  ||||||||    
T  31521282 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtacagtccgatcatctaatttagggtaagggtgaggctaactttcaataattata 31521187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 14179672 - 14179758
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    |||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||||  |||||||||||||||||||| |||| ||||    
T  14179672 gaagagaataatcttgtgagaagaggagcaatcttgtagagttcgatcatctaatataaggtaagggtgggactaaccttctttaat 14179758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 115
Target Start/End: Original strand, 149474 - 149549
Alignment:
Q  40 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattct 115  Q
    ||||||||||||||||||||||||||  ||||||||||||| |||| ||||||||||| || | || |||||||||    
T  149474 aatcttgtagagtccgatcatctaatctaaggtaagggtggaactagctttctctaataatgagttgtataattct 149549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 14183405 - 14183496
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    |||| ||| |||||||| ||||||||||   ||||||||| || | ||||||||||||||| |||||||||||||||||||| |||| ||||    
T  14183405 tcagtgaaaagaagaatcttgtgagaagtgaagcaatcttataaaatccgatcatctaatttaaggtaagggtgggactaaccttctttaat 14183496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 20916420 - 20916339
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaac 87  Q
    |||| ||||||| |||| || |||||||| ||||||||||||||||  ||||||||||||| || |||||||||| ||||||    
T  20916420 tcagagaagagaggaatcttatgagaagaggagcaatcttgtagagctcgatcatctaatttaaagtaagggtggaactaac 20916339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 44072608 - 44072509
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||| ||||||||||| |||||| | || | ||| ||| || ||||||| ||||||| |||||||||||||||| ||||||||||| |||||    
T  44072608 aaggtaagggtgagactaactttcactaattct-aagtgtatgattttgaaaattgaatttagcaagttgtaggttgtagttttgggaatttggaaatta 44072510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 25046169 - 25046088
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgtaggttgtagtt 148  Q
    |||||||||||||||||||| |||| ||||| ||| || ||||||||||| |||||  |||| ||||||||||| |||||||    
T  25046169 aaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggatgtagtt 25046088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 21080970 - 21081021
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||||||||||||||||||||||||||| ||| | || |||||||||||    
T  21080970 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 21081021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 58
Target Start/End: Complemental strand, 24718127 - 24718080
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatc 58  Q
    |||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  24718127 gaagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatc 24718080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 167
Target Start/End: Original strand, 18390229 - 18390314
Alignment:
Q  82 actaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||||| ||| | ||||||||||| |||| || |||| || | |||| ||||||||| ||||||||||||||||||    
T  18390229 actaactttctctaattctaagtgatataattctgaaaatagaatttaacaag-tgtatgttgtagttttgggaatttgggaattag 18390314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 5986228 - 5986128
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||||||| ||| |||| ||||| ||| || |||||||||| ||||||  |||| || |||||||||| ||||| || | ||||| ||||||    
T  5986228 aaggtaagggtgggacgaaccttctttaattctaagttgtataattctgaaaattggatttaacaagttgtaggttatagttttgaggatttgagaatta 5986129  T
Q  167 g 167  Q
    |    
T  5986128 g 5986128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 189
Target Start/End: Complemental strand, 19358942 - 19358820
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggg-aatt 165  Q
    |||||||||||||||||||| ||   ||||| | | | |||| ||||||||| |||| |||| || ||||| |||||||||| |||||||||||| ||||    
T  19358942 aaggtaagggtgggactaacctttaataattctgagt-atatgattctgaaaattgaatttaacaagttgtgggttgtagttttgggaatttgggaaatt 19358844  T
Q  166 agatattgaagttgtaattggttg 189  Q
    ||   | |||||||||||||||||    
T  19358843 agggttagaagttgtaattggttg 19358820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 18388227 - 18388289
Alignment:
Q  105 tatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    ||||| ||||||||| |||  |||| || |||||||||||||||| |||||||||||||||||    
T  18388227 tatatgattctgaaaattggatttaacaagttgtaggttgtagttttgggaatttgggaatta 18388289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 24884453 - 24884399
Alignment:
Q  136 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgt 190  Q
    ||||||||||||| ||  |||||||||||||| | | ||||||||||||||||||    
T  24884453 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgt 24884399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 14694377 - 14694296
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagtt 148  Q
    |||||||||||| |||||||||||| ||||| ||| | || ||||| || ||||||  |||| |||| ||||||||||||||    
T  14694377 aaggtaagggtgagactaactttctataattctaagtaatttaattttgaaaattggatttaacatgatgtaggttgtagtt 14694296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 23801559 - 23801518
Alignment:
Q  56 atcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    ||||||||||  |||||||||||||||||| |||||||||||    
T  23801559 atcatctaatctaaggtaagggtgggactagctttctctaat 23801518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 12626399 - 12626447
Alignment:
Q  40 aatcttgtagagtccgatca-tctaattcaaggtaagggtgggactaac 87  Q
    |||||||||||||||||||| || |||  ||||||||||||||||||||    
T  12626399 aatcttgtagagtccgatcattcaaatgtaaggtaagggtgggactaac 12626447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 6 - 232
Target Start/End: Original strand, 407 - 633
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| ||| |||||||| ||||||||||| || ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||| ||    
T  407 tcagagaaaagaagaatcttgtgagaagaggaacaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagtt 506  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  507 gtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaa 606  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    || ||||||||||||||| ||||||||    
T  607 taagttgaatttgtgtagaattgatgt 633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 170; Significance: 2e-91; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 11 - 232
Target Start/End: Original strand, 42817851 - 42818072
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatata 110  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| || ||||    
T  42817851 gaagagaagaatcttgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacttactttctctaattctaagttgtata 42817950  T
Q  111 attctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgt 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||  ||    
T  42817951 attctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattagattttgaagttgtaattggttgttaataaagtagaaaatccgt 42818050  T
Q  211 tgaatttgtgtagtattgatgt 232  Q
    ||||||||||||| ||||||||    
T  42818051 tgaatttgtgtagaattgatgt 42818072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 13 - 223
Target Start/End: Complemental strand, 19140870 - 19140661
Alignment:
Q  13 agagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataat 112  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||| || ||||||    
T  19140870 agagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacta-ctttctctaattctaagttgtataat 19140772  T
Q  113 tctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttg 212  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  ||||    
T  19140771 tctgaaattgagtttagcaagttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttg 19140672  T
Q  213 aatttgtgtag 223  Q
    |||||||||||    
T  19140671 aatttgtgtag 19140661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 6 - 232
Target Start/End: Original strand, 39935946 - 39936175
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| ||||||||||||  |||||||||| || || ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||| ||    
T  39935946 tcagagaagagaagaatcatgtgagaagaagaacagtcttgtagagtccgatcatctaatttaaggtaagggtgggattaactttctctaattctaagtt 39936045  T
Q  106 atataattctgaaattgagtttagca---tgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtaga 202  Q
     ||||||| |||||||||||||||||   |||||||||||||||||||||||||||| ||||||| | |||||||||||||| |||||||||||||||||    
T  39936046 gtataattatgaaattgagtttagcatgttgttgtaggttgtagttatgggaatttgcgaattaggttttgaagttgtaattagttgttaatagagtaga 39936145  T
Q  203 aaatatgttgaatttgtgtagtattgatgt 232  Q
    ||||  ||||||||||||||  ||||||||    
T  39936146 aaatccgttgaatttgtgtacaattgatgt 39936175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 68 - 241
Target Start/End: Original strand, 20083639 - 20083812
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||||||||| |||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20083639 aaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgggaattag 20083738  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgtccatctcat 241  Q
     | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||| ||| ||||    
T  20083739 gttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgttcatatcat 20083812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 68 - 232
Target Start/End: Original strand, 6101754 - 6101918
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||| ||||||||||||||||||||||| ||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  6101754 aaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaattgtgtttagcatgttgtaggttgtagttatgggaatttgggaatcag 6101853  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
     | |||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  6101854 gttttgaagttataattggttgttaatagagtagaaaatctattgaatttgtgtagtattgatgt 6101918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 77 - 232
Target Start/End: Original strand, 5082222 - 5082377
Alignment:
Q  77 gtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaag 176  Q
    |||||||||||||||||||||| ||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  5082222 gtgggactaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaag 5082321  T
Q  177 ttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  5082322 ttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5082377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 54 - 232
Target Start/End: Complemental strand, 5761598 - 5761421
Alignment:
Q  54 cgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatggg 153  Q
    |||||||||||   ||||||||||||||||||||||||||||||| ||| |  ||||||| |||||||||||||||||||||||||||||||||||||||    
T  5761598 cgatcatctaacctaaggtaagggtgggactaactttctctaattctaagtg-tataattttgaaattgagtttagcatgttgtaggttgtagttatggg 5761500  T
Q  154 aatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
    |||||||||||||| | |||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||    
T  5761499 aatttgggaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5761421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 71 - 232
Target Start/End: Original strand, 6573060 - 6573221
Alignment:
Q  71 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 170  Q
    ||||||||| |||||||||||||||||| ||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |     
T  6573060 gtaagggtgagactaactttctctaattctaagttgtataattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatgaggtt 6573159  T
Q  171 ttgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  6573160 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 6573221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 71 - 218
Target Start/End: Complemental strand, 37292753 - 37292606
Alignment:
Q  71 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 170  Q
    |||||||||||||||||||||||||||| ||  || ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||| |     
T  37292753 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 37292654  T
Q  171 ttgaagttgtaattggttgttaatagagtagaaaatatgttgaatttg 218  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  37292653 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg 37292606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 71 - 218
Target Start/End: Complemental strand, 6202824 - 6202677
Alignment:
Q  71 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 170  Q
    ||||||||| |||||||||||||||||| ||  || ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||| ||||||| |     
T  6202824 gtaagggtgagactaactttctctaattctacgttgtataattctgaaattgaattttgcatgttgtaggttgtagttatgagaatttgagaattaggtt 6202725  T
Q  171 ttgaagttgtaattggttgttaatagagtagaaaatatgttgaatttg 218  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  6202724 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 6202677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 18761556 - 18761448
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatata 110  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||| |  ||||    
T  18761556 gaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgcgactaactttctctaattctaagtggtata 18761457  T
Q  111 attctgaaa 119  Q
    |||||||||    
T  18761456 attctgaaa 18761448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 120 - 241
Target Start/End: Original strand, 20178581 - 20178704
Alignment:
Q  120 ttgagtttagca-tgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaa-ttggttgttaatagagtagaaaatatgttgaattt 217  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||| | |||||||||||| ||||||||||||||||||||||||  |||||||||    
T  20178581 ttgagtttagcaatgttgtaggttgtagttatgagaatttgggaattaggttttgaagttgtaaattggttgttaatagagtagaaaattcgttgaattt 20178680  T
Q  218 gtgtagtattgatgtccatctcat 241  Q
    |||||| |||||||| ||| ||||    
T  20178681 gtgtagaattgatgttcatatcat 20178704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 21579145 - 21579241
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataa 102  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||| |||| ||||    
T  21579145 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaaccttctttaatcataa 21579241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 22258250 - 22258353
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatata 110  Q
    |||||||||||| ||||||||||| |||||||||||||| |||||||||||||||| |||||||||||| ||||| ||||||||||| || | || ||||    
T  22258250 gaagagaagaatcttgtgagaagaagagcaatcttgtagtgtccgatcatctaatttaaggtaagggtgagactagctttctctaataatgagttgtata 22258349  T
Q  111 attc 114  Q
    ||||    
T  22258350 attc 22258353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 36306110 - 36306019
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||  |||||||||||| ||||| |||||||||||    
T  36306110 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatctaaggtaagggtgagactagctttctctaat 36306019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 68 - 221
Target Start/End: Original strand, 20397511 - 20397656
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||| ||||||||||||||| ||| || |||||||||||||||||||||||||||||    |||||     || || ||||||||||||    
T  20397511 aaggtaagggtgggattaactttctctaattctaagttgtataattctgaaattgagtttagcatgtt----gttgt-----tgtgattttgggaattag 20397601  T
Q  168 atattgaagttgtaatt-ggttgttaatagagtagaaaatatgttgaatttgtgt 221  Q
     | || ||||||||||| ||||||||||||||||||||||   ||||||||||||    
T  20397602 gttttaaagttgtaattaggttgttaatagagtagaaaatccattgaatttgtgt 20397656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 98
Target Start/End: Original strand, 23943765 - 23943857
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaatt 98  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||  || ||||||||||||    
T  23943765 tcagagaagagaagaattttgtgagaagaggagcaatcttgtagagtccggtcatctaatttaaggtaagggtgggtatagctttctctaatt 23943857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 223
Target Start/End: Original strand, 22532133 - 22532288
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || ||||||||||||| ||| || |||||||||||    
T  22532133 aaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaaattgggaattag 22532232  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtag 223  Q
     | |  |||||||||||| |||||   | |||||||||| ||||||||| ||||||    
T  22532233 gtttaaaagttgtaattgattgttttaatagtagaaaatttgttgaattggtgtag 22532288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 223
Target Start/End: Original strand, 22536818 - 22536973
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || ||||||||||||| ||| || |||||||||||    
T  22536818 aaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaaattgggaattag 22536917  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtag 223  Q
     | |  |||||||||||| |||||   | |||||||||| ||||||||| ||||||    
T  22536918 gtttaaaagttgtaattgattgttttaatagtagaaaatttgttgaattggtgtag 22536973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 18834526 - 18834444
Alignment:
Q  15 agaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    |||||||| ||||||||||| | |||||||||||| | |||||||||||||| |||||||||||||||||| |||||||||||    
T  18834526 agaagaatcttgtgagaagaggggcaatcttgtagtgcccgatcatctaatttaaggtaagggtgggactagctttctctaat 18834444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 157
Target Start/End: Original strand, 20022025 - 20022131
Alignment:
Q  52 tccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttat 150  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||| ||| |  |||||||||| |||| || |||| || |||||||||||||||| |    
T  20022025 tccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagtttt 20022124  T
Q  151 gggaatt 157  Q
    |||||||    
T  20022125 gggaatt 20022131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 29762806 - 29762903
Alignment:
Q  5 atcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataa 102  Q
    ||||| |||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||  |||||| |||| |||| ||||    
T  29762806 atcagagaagaagagaatcttgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgaaactaaccttctttaatcataa 29762903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 235
Target Start/End: Original strand, 31722498 - 31722661
Alignment:
Q  72 taagggtgggactaactttctctaattataaattatataattctgaaatt-gagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 170  Q
    ||||||||||||||||||||||||||| ||| |  ||||||| ||||| | || |||| || |||||||||||||||| ||||||||||| |||| | |     
T  31722498 taagggtgggactaactttctctaattctaagtggtataattttgaaaatcgaatttaacaagttgtaggttgtagttttgggaatttggaaatttggtt 31722597  T
Q  171 ttgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgtcca 235  Q
    | ||||||||||||||||| |   ||||||| |||| |||||||||  ||||| ||| |||||||    
T  31722598 tagaagttgtaattggttgatttaagagtag-aaatctgttgaattgatgtagaattaatgtcca 31722661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 39694281 - 39694377
Alignment:
Q  71 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||| | ||||| |||||||||||||||| || ||| ||||||||| ||  |||| || |||||||||||||||| ||||||||||||||||||    
T  39694281 gtaagggcgtgactagctttctctaattataagttgtatgattctgaaactggatttaacaagttgtaggttgtagttttgggaatttgggaattag 39694377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 17906850 - 17906949
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||||||||||||||||||| ||| || ||| ||||||||| ||  |||| || |||||||||||||||  |||| ||||| |||||||    
T  17906850 aaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaagttgtaggttgtagtgttggggatttgagaattag 17906949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 22208360 - 22208269
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||| ||||||||| |||||| |||||||||||||  |||||||||||||||||| ||||||||||| ||   || |||||||||||||    
T  22208360 gagaagaggagcaatctggtagagaccgatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 22208269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 189
Target Start/End: Original strand, 45469220 - 45469342
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||| |||||||||||||||||| ||| |  |||||||||| |||| || |||| || |||||||||| ||||| ||  |||||||||||||    
T  45469220 aaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttatagttttgtaaatttgggaatta 45469319  T
Q  167 gatattgaagttgtaattggttg 189  Q
      | | |||||||||||||||||    
T  45469320 tgtttagaagttgtaattggttg 45469342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 12037125 - 12037184
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaac 87  Q
    ||||||| ||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  12037125 gagaagaggagcaatctcgtagagtccgatcatctaatataaggtaagggtgggactaac 12037184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 189
Target Start/End: Original strand, 22317912 - 22318033
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||||||||||| ||| |||||| ||| |  ||| ||||||||| |||| |||| || ||| ||||||||||||  |||||||||||| |||    
T  22317912 aaggtaagggtgggactaaccttcactaattctaagtg-tatgattctgaaaattgaatttaacaggttctaggttgtagtttcgggaatttgggattta 22318010  T
Q  167 gatattgaagttgtaattggttg 189  Q
    | | | |||||||||||||||||    
T  22318011 ggtttagaagttgtaattggttg 22318033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 4380604 - 4380669
Alignment:
Q  54 cgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    |||||||||||   ||||||||||||||||||||||||||||||| ||| || |||||||||||||    
T  4380604 cgatcatctaacctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 4380669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 23899988 - 23900080
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttg 159  Q
    |||||||||||| |||||||||||||||||| ||| | |||||| ||||| |||||| |||| || |||||||| ||||||| |||| |||||    
T  23899988 aaggtaagggtgtgactaactttctctaattctaagtgatataactctgagaattgaatttaacaagttgtaggctgtagttttggggatttg 23900080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 36727039 - 36727139
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||| |||||||||||||||||| ||| |  |||||||||| ||||||  |||| || |||||||||||||||| | || ||||| ||||||    
T  36727039 aaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattggatttaacaagttgtaggttgtagtttttgggatttgagaatta 36727138  T
Q  167 g 167  Q
    |    
T  36727139 g 36727139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 22345257 - 22345186
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccg--atcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    ||||||| |||||| ||||||||||| |  ||||||||||  |||||||||||||||||| |||||||||||    
T  22345257 gagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 22345186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 22356917 - 22356846
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccg--atcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    ||||||| |||||| ||||||||||| |  ||||||||||  |||||||||||||||||| |||||||||||    
T  22356917 gagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 22356846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 167
Target Start/End: Original strand, 42265546 - 42265609
Alignment:
Q  105 tatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||| ||||||||| |||| |||| || |||||||||||||||| ||||||||||||||||||    
T  42265546 tatatgattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaattag 42265609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 36305903 - 36305837
Alignment:
Q  71 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgt 137  Q
    ||||||||| || ||||||||| ||||| ||  || ||||||| |||||||||||||||||||||||    
T  36305903 gtaagggtgtgattaactttctttaattttaggttgtataattatgaaattgagtttagcatgttgt 36305837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 19700212 - 19700131
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgtaggttgtagtt 148  Q
    |||||||||||||||||||| |||| ||||| ||| || ||||||||| | ||| |  |||| |||||||||||||||||||    
T  19700212 aaggtaagggtgggactaaccttctttaattctaagttgtataattctaagaatcggatttaacatgttgtaggttgtagtt 19700131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 23419492 - 23419411
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgtaggttgtagtt 148  Q
    |||||||||||||||||||| |||| ||||| ||| || ||||||||||| |||||  |||| ||| ||||||| |||||||    
T  23419492 aaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatattgtaggatgtagtt 23419411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 167
Target Start/End: Complemental strand, 17218749 - 17218653
Alignment:
Q  72 taagggtgggactaactttctctaattataaattatataattctgaaattgag-tttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||||||||||||||||||||| || ||| |  ||||||||||||| | || |||||||  ||||||||||| ||| || | ||||| |||||||    
T  17218749 taagggtgggactaactttctctagttctaagtattataattctgaaaattagatttagcaatttgtaggttgttgttttgaggatttgagaattag 17218653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 22254817 - 22254741
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttg 143  Q
    ||||||| ||||||||||||||||||||||| ||| |  |||||||||| ||||||  |||| || |||||||||||    
T  22254817 aaggtaatggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttg 22254741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 23948314 - 23948214
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    ||||||||||||| |||||| |||| ||||| ||| || ||| |||||| ||| ||  |||| || |||||||||||||||| |||| ||||| ||||||    
T  23948314 aaggtaagggtggtactaaccttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttggggatttgagaatta 23948215  T
Q  167 g 167  Q
    |    
T  23948214 g 23948214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 23884262 - 23884192
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccga--tcatctaattcaaggtaagggtgggactaactttctctaa 96  Q
    ||||||| |||||| ||||||||||| ||  |||||||||  |||||||||| ||||||| ||||||||||    
T  23884262 gagaagaggagcaaacttgtagagtctgaattcatctaatctaaggtaagggcgggactagctttctctaa 23884192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 26454759 - 26454708
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||||||||||||||||||||||||||| ||| |  | |||||||||||    
T  26454759 aaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 26454708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 98
Target Start/End: Original strand, 17158964 - 17158994
Alignment:
Q  68 aaggtaagggtgggactaactttctctaatt 98  Q
    |||||||||||||||||||||||||||||||    
T  17158964 aaggtaagggtgggactaactttctctaatt 17158994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 98
Target Start/End: Complemental strand, 19880873 - 19880843
Alignment:
Q  68 aaggtaagggtgggactaactttctctaatt 98  Q
    |||||||||||||||||||||||||||||||    
T  19880873 aaggtaagggtgggactaactttctctaatt 19880843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 134
Target Start/End: Original strand, 22583661 - 22583727
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgt 134  Q
    ||||||||||||||| |||| |||| ||||| ||  || ||||||||||||||||| |||| |||||    
T  22583661 aaggtaagggtgggattaacattctttaattctaggttgtataattctgaaattgaatttaacatgt 22583727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 98
Target Start/End: Complemental strand, 23479133 - 23479103
Alignment:
Q  68 aaggtaagggtgggactaactttctctaatt 98  Q
    |||||||||||||||||||||||||||||||    
T  23479133 aaggtaagggtgggactaactttctctaatt 23479103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 134
Target Start/End: Complemental strand, 23889846 - 23889784
Alignment:
Q  72 taagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgt 134  Q
    |||||||| || ||||||||||||||| ||  || ||||||||||||||||| |||| |||||    
T  23889846 taagggtgagattaactttctctaattctaggttgtataattctgaaattgaatttaacatgt 23889784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 97
Target Start/End: Complemental strand, 12577930 - 12577901
Alignment:
Q  68 aaggtaagggtgggactaactttctctaat 97  Q
    ||||||||||||||||||||||||||||||    
T  12577930 aaggtaagggtgggactaactttctctaat 12577901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 20879565 - 20879489
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccga--tcatctaattcaaggtaagggtgggactaactttctctaattataa 102  Q
    ||||||| |||||| ||||||||||||||  ||| | |||  |||||||||||||||||||| |||| |||| ||||    
T  20879565 gagaagaggagcaaacttgtagagtccgaattcaaccaatctaaggtaagggtgggactaaccttctttaatcataa 20879489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 21514756 - 21514695
Alignment:
Q  54 cgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattct 115  Q
    ||||||||||| | ||||||||||||||||||  |||||||||| || | || |||||||||    
T  21514756 cgatcatctaacttaaggtaagggtgggactagatttctctaataatgagttgtataattct 21514695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 97
Target Start/End: Original strand, 22610268 - 22610297
Alignment:
Q  68 aaggtaagggtgggactaactttctctaat 97  Q
    ||||||||||||||||||||||||||||||    
T  22610268 aaggtaagggtgggactaactttctctaat 22610297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 6 - 232
Target Start/End: Original strand, 4653 - 4879
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| ||    
T  4653 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtcggactaactttctctaattctaagtt 4752  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  4753 gtataattctgaaattgagtttagcatgttgtaggtcgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaa 4852  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  ||||||||||||||| | ||||||    
T  4853 tccgttgaatttgtgtagaagtgatgt 4879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 166; Significance: 6e-89; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 11 - 232
Target Start/End: Complemental strand, 34447 - 34226
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatata 110  Q
    |||||||||||| |||||||||||  |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| || | ||    
T  34447 gaagagaagaatcttgtgagaagagtagcaattttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaatttgttta 34348  T
Q  111 attctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgt 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||| |||    
T  34347 attctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatcaggttttgaagttgtaattggttgttaatagagtagaaaatttgt 34248  T
Q  211 tgaatttgtgtagtattgatgt 232  Q
    ||||||||||||| ||||||||    
T  34247 tgaatttgtgtagaattgatgt 34226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 6001 - 5921
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagtt 148  Q
    |||||||||||||||||||| |||| ||||| ||| || ||||||||||||||||| |||| ||||||||||| |||||||    
T  6001 aaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattgaatttaacatgttgtaggatgtagtt 5921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 163; Significance: 4e-87; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 58859 - 58633
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||| ||    
T  58859 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagtt 58760  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  58759 gtacaattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaa 58660  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  ||||||||||| ||| ||||||||    
T  58659 tccgttgaatttgtatagaattgatgt 58633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 163; Significance: 4e-87; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 32107 - 31881
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||| ||    
T  32107 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaactttctctaattctaagtt 32008  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||    
T  32007 gtataattctgaaattgagtttagcatgttataggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagcagaaaa 31908  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  ||||||||||||||| | ||||||    
T  31907 ttcgttgaatttgtgtagaagtgatgt 31881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 37414 - 37188
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||| ||    
T  37414 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaactttctctaattctaagtt 37315  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||    
T  37314 gtataattctgaaattgagtttagcatgttataggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagcagaaaa 37215  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  ||||||||||||||| | ||||||    
T  37214 ttcgttgaatttgtgtagaagtgatgt 37188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 6 - 232
Target Start/End: Complemental strand, 77800 - 77574
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| ||| |||||||| ||||||||||| ||| |||||||||||||| |||||||||||  |||||||||||| |||||||||||||||||| ||| ||    
T  77800 tcagagaacagaagaatcttgtgagaagaggagtaatcttgtagagtctgatcatctaatctaaggtaagggtgagactaactttctctaattctaagtt 77701  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||| |||||||||||||||||||||    
T  77700 gtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgagaattaggttttgaagttgtaataggttgttaatagagtagaaaa 77601  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  ||||||||||||||  ||||||||    
T  77600 tccgttgaatttgtgtataattgatgt 77574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 157; Significance: 1e-83; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 12 - 232
Target Start/End: Original strand, 21738 - 21958
Alignment:
Q  12 aagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataa 111  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||| ||| || ||||     
T  21738 aagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaatggtgggactaaatttctctaattctaagttgtatag 21837  T
Q  112 ttctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgtt 211  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| |||    
T  21838 ttctgaaattgaatttagcatgttgtaggttgtatttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtaaaaaataagtt 21937  T
Q  212 gaatttgtgtagtattgatgt 232  Q
    |||||||||||| ||||||||    
T  21938 gaatttgtgtagaattgatgt 21958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 58826 - 58880
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcat 60  Q
    |||| |||||||||||| ||||||||||| ||| |||||||||||||||||||||    
T  58826 tcagagaagagaagaatcttgtgagaagaggagtaatcttgtagagtccgatcat 58880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 154; Significance: 9e-82; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 11 - 232
Target Start/End: Complemental strand, 1313 - 1092
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatata 110  Q
    |||||||||||| |||||||||||  |||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||| || ||||    
T  1313 gaagagaagaatcttgtgagaagagtagcaattttgtagaatccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtata 1214  T
Q  111 attctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgt 210  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||||| | ||||||||||||||||||||||||||| ||||||||  ||    
T  1213 attctgaaattgagtttagcatgttgtaggttgtagttattgtaatttgggaattaggttttgaagttgtaattggttgttaatagaatagaaaatccgt 1114  T
Q  211 tgaatttgtgtagtattgatgt 232  Q
    ||||||||||||| ||||||||    
T  1113 tgaatttgtgtagaattgatgt 1092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 6 - 232
Target Start/End: Original strand, 11214 - 11439
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||| | ||| ||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||| ||    
T  11214 tcagagaagagaagaatcttgtgagaaaa-gagtaatgttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagtt 11312  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||    
T  11313 gtatatttctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaaaa 11412  T
Q  206 tatgttgaatttgtgtagtattgatgt 232  Q
    |  ||||||||||||||| ||||||||    
T  11413 tccgttgaatttgtgtagaattgatgt 11439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 40 - 219
Target Start/End: Original strand, 12506 - 12685
Alignment:
Q  40 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtag 139  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||| || ||||||||||||||||||||||||||||| |||    
T  12506 aatcttgtagagtccgatcatctaatccaaggtaagggtgggaataactttctctaattctaagttgtataattctgaaattgagtttagcatgttatag 12605  T
Q  140 gttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgt 219  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  |||||||||||    
T  12606 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgt 12685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 70 - 232
Target Start/End: Complemental strand, 5432 - 5270
Alignment:
Q  70 ggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagat 169  Q
    ||||||||||||||||||||||||||||| ||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |    
T  5432 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 5333  T
Q  170 attgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
     ||||||| ||||||||||||||||||||||||||||   |||||||||||||| ||||||||    
T  5332 tttgaagtcgtaattggttgttaatagagtagaaaatcctttgaatttgtgtagaattgatgt 5270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 137; Significance: 1e-71; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 40 - 232
Target Start/End: Original strand, 21300017 - 21300209
Alignment:
Q  40 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtag 139  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| ||| || ||||||||||||||| |||||||||||||||||    
T  21300017 aatcttgtagagtctgatcatctaatctaaggtaagggtgggactaactttctctaattttaagttgtataattctgaaattaagtttagcatgttgtag 21300116  T
Q  140 gttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
    || ||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||    
T  21300117 gtagtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttaaatttgtgtagaattgatgt 21300209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 31 - 232
Target Start/End: Complemental strand, 19921732 - 19921525
Alignment:
Q  31 aagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtggga------ctaactttctctaattataaattatataattctgaaattgag 124  Q
    |||||||||||||| |||||| |||||||||||||  |||||||||||||||      ||| |||||||||||| ||| || ||||||||||||||||||    
T  19921732 aagatgagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggagtgggactacctttctctaattctaagttgtataattctgaaattgag 19921633  T
Q  125 tttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagt 224  Q
    |||| |||||||||||||||| |||||| |||||||||||||| | |||||||| ||||| ||||||||||||||||||||| ||||||||||||||||     
T  19921632 tttaacatgttgtaggttgtaattatggaaatttgggaattaggttttgaagttataattagttgttaatagagtagaaaatctgttgaatttgtgtaga 19921533  T
Q  225 attgatgt 232  Q
    ||||||||    
T  19921532 attgatgt 19921525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 71 - 218
Target Start/End: Complemental strand, 7485050 - 7484903
Alignment:
Q  71 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 170  Q
    |||||||||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |     
T  7485050 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 7484951  T
Q  171 ttgaagttgtaattggttgttaatagagtagaaaatatgttgaatttg 218  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  7484950 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg 7484903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 228
Target Start/End: Complemental strand, 20566597 - 20566445
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||||||||| ||||||||||||||||||  || || |||||||||||||||||||||||||||||||||||||||||||||||        ||||||    
T  20566597 aaggtaagggtgagactaactttctctaattcaaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggg--------aattag 20566506  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattg 228  Q
     | ||||||||||||||||||||||||||| ||||||||  || |||||||||||| ||||    
T  20566505 gttttgaagttgtaattggttgttaatagaatagaaaatccgtagaatttgtgtagaattg 20566445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 23199151 - 23199259
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatata 110  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||   || ||||    
T  23199151 gaagagaagaatcttgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtata 23199250  T
Q  111 attctgaaa 119  Q
    |||||||||    
T  23199251 attctgaaa 23199259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 58 - 206
Target Start/End: Complemental strand, 31622178 - 31622038
Alignment:
Q  58 catctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatt 157  Q
    ||||||||  ||||||||||||||| ||||||||||||||| ||  || ||||||||||||||||||||||||||||||| | |||||        ||||    
T  31622178 catctaatctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgta--------aatt 31622087  T
Q  158 tgggaattagatattgaagttgtaattggttgttaatagagtagaaaat 206  Q
    |||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  31622086 tgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaat 31622038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 21398583 - 21398674
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||| || |||||||||||    
T  21398583 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatctaaggtaagggtgggattagctttctctaat 21398674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 36508628 - 36508757
Alignment:
Q  62 taattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 161  Q
    ||||| |||||||||||| |||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || ||||||||||||| ||| ||||||||    
T  36508628 taatttaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaaatggatttaacaggtggtaggttgtagttttggaaatttggg 36508727  T
Q  162 aattagatattgaagttgtaattggttgtt 191  Q
    |||||  | | |||||||||||||||||||    
T  36508728 aattatgtttagaagttgtaattggttgtt 36508757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 21617929 - 21618029
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattct-gaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    ||||||||||||||||||||||||||||||| ||| | |||||| |||  ||||||| |||| || |||||||||||||||| |||||||||| ||||||    
T  21617929 aaggtaagggtgggactaactttctctaattctaagtgatataactctaaaaattgaatttaacaagttgtaggttgtagttttgggaatttgagaatta 21618028  T
Q  167 g 167  Q
    |    
T  21618029 g 21618029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 20469177 - 20469277
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    ||||||||||||||||||||||||||||||| ||| | |||||| |||| ||||||  |||| || |||||||||||||||| |||| | ||| ||||||    
T  20469177 aaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttggggacttgagaatta 20469276  T
Q  167 g 167  Q
    |    
T  20469277 g 20469277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 191
Target Start/End: Complemental strand, 31457011 - 31456888
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||||||||| |||||||||||||||||| ||| |  ||| ||||||||| ||  |||| ||    ||||||||||||| ||| ||||||| ||||||    
T  31457011 aaggtaagggtgagactaactttctctaattttaagtggtatgattctgaaactggatttaacacaaggtaggttgtagttttggaaatttggaaattag 31456912  T
Q  168 atattgaagttgtaattggttgtt 191  Q
     | | |||||||||||||||||||    
T  31456911 gtttagaagttgtaattggttgtt 31456888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 137
Target Start/End: Complemental strand, 22111876 - 22111810
Alignment:
Q  71 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgt 137  Q
    |||||||||||| ||||||||||||||| |   || ||||||| |||||||||||||||||||||||    
T  22111876 gtaagggtgggattaactttctctaatttttggttgtataattttgaaattgagtttagcatgttgt 22111810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 32607280 - 32607346
Alignment:
Q  31 aagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    |||| ||||||||| |||||| ||||| |||||||  |||||||||||||||||| |||||||||||    
T  32607280 aagaggagcaatctcgtagagaccgattatctaatctaaggtaagggtgggactagctttctctaat 32607346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 25249829 - 25249910
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagtt 148  Q
    ||||||||||| |||||||| |||| ||||| ||| ||||||||||||| ||||||  |||| ||||||||||||| |||||    
T  25249829 aaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggttatagtt 25249910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 148
Target Start/End: Original strand, 25313613 - 25313694
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagtt 148  Q
    ||||||||||| |||||||| |||| ||||| ||| ||||||||||||| ||||||  |||| ||||||||||||| |||||    
T  25313613 aaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggttatagtt 25313694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 26762515 - 26762403
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| ||||| |||||| |||||||||||  |||||||||||||||| |||||   |||   |||||||||||||||||||| |||| |||| || ||||    
T  26762515 tcagagaagaaaagaatcttgtgagaagagaagcaatcttgtagagttcgatcgattaacctaaggtaagggtgggactaaccttctttaatcat-aatt 26762417  T
Q  106 atataattctgaaa 119  Q
    || |||| ||||||    
T  26762416 atgtaatcctgaaa 26762403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 266089 - 266038
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||||||||||||||||||||||||||| ||| | || |||||||||||    
T  266089 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 266038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 6551291 - 6551342
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    |||||||||||| |||||||||||||||||| ||| || |||||||||||||    
T  6551291 aaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 6551342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 8503857 - 8503913
Alignment:
Q  36 gagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttct 92  Q
    ||||||||| |||||| ||||| |||||||  |||||||||||||||||||| ||||    
T  8503857 gagcaatctcgtagagaccgattatctaatataaggtaagggtgggactaaccttct 8503913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 10954140 - 10954060
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagtt 148  Q
    |||||||||||||||||||| |||  ||||| ||| || | ||||| ||||||||  |||| ||||||||||| |||||||    
T  10954140 aaggtaagggtgggactaaccttccttaattctaagttgtgtaattatgaaattggatttaacatgttgtaggatgtagtt 10954060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 187
Target Start/End: Original strand, 31251931 - 31252011
Alignment:
Q  107 tataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggt 187  Q
    ||||||||||||||||  |||| || ||| |||||||||||| | |||||||| ||||||| | | |||||| ||||||||    
T  31251931 tataattctgaaattggatttaacaggttataggttgtagttttaggaatttgagaattaggtttagaagttataattggt 31252011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 17011779 - 17011728
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||||||||||||||||||||||||||| ||| |  | |||||||||||    
T  17011779 aaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 17011728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 18744925 - 18744874
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    |||||||||||||||||||||||||||||| ||   || |||||||||||||    
T  18744925 aaggtaagggtgggactaactttctctaataatgggttgtataattctgaaa 18744874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 17876186 - 17876132
Alignment:
Q  136 gtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgt 190  Q
    ||||||||||||| ||  |||||||||||||| | | ||||||||||||||||||    
T  17876186 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgt 17876132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 189
Target Start/End: Original strand, 21405665 - 21405751
Alignment:
Q  105 tatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggg-aattagatattgaagttgtaattggttg 189  Q
    ||||| ||||||||| |||| |||| || ||||| |||||||||| |||||||||||| ||||||   | |||||||||||||||||    
T  21405665 tatatgattctgaaaattgaatttaacaggttgtgggttgtagttttgggaatttgggaaattagggttagaagttgtaattggttg 21405751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 30616663 - 30616614
Alignment:
Q  70 ggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||||||||||| ||||||||||||| ||| || ||| |||||||||    
T  30616663 ggtaagggtgggactgactttctctaattctaagttgtatgattctgaaa 30616614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 10774665 - 10774763
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||||||||||| ||| |||||| | || | ||| |||||| ||||||| |||| |||| ||||| |||||||| || ||||| ||||||||    
T  10774665 aaggtaagggtgggactaaccttcactaattct-aagtgtatgattctgaaaattgaatttaacatg-tgtagattgtagttttgtgaattcgggaatta 10774762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 14025794 - 14025842
Alignment:
Q  54 cgatcatctaattcaaggtaagggtgggactaactttctctaattataa 102  Q
    ||||||||||||  |||||||||||||||||||| |||| |||| ||||    
T  14025794 cgatcatctaatctaaggtaagggtgggactaaccttctttaatcataa 14025842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 22111765 - 22111729
Alignment:
Q  170 attgaagttgtaattggttgttaatagagtagaaaat 206  Q
    |||||||| |||||||||||||||||||| |||||||    
T  22111765 attgaagtcgtaattggttgttaatagagcagaaaat 22111729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 6 - 167
Target Start/End: Original strand, 24070 - 24231
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||    
T  24070 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagtt 24169  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24170 gtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 24231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 68 - 232
Target Start/End: Complemental strand, 189 - 25
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  189 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaattag 90  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
     | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  89 gttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 25  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 12 - 180
Target Start/End: Original strand, 78130 - 78298
Alignment:
Q  12 aagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataa 111  Q
    ||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||| || |||||    
T  78130 aagagaataatcttgtgagaagaggagcaatcttgtagagtacgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataa 78229  T
Q  112 ttctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgt 180  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||    
T  78230 ttctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgt 78298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 68 - 232
Target Start/End: Original strand, 697 - 861
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||| |||||||||||||||||||||||| ||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  697 aaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaattag 796  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
     | |||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||    
T  797 gttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 121; Significance: 4e-62; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 68 - 232
Target Start/End: Complemental strand, 3233 - 3069
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||| ||||||||||||||||||| ||| || ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  3233 aaggtaagggttggactaactttctctaattctaagttgtataattctgaaattgactttagtatgttgtaggttgtagttatgggaatttgggaattag 3134  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
     | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  3133 gttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 3069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 125 - 232
Target Start/End: Complemental strand, 2558 - 2451
Alignment:
Q  125 tttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagt 224  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  |||||||||||||||     
T  2558 tttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 2459  T
Q  225 attgatgt 232  Q
    ||||||||    
T  2458 attgatgt 2451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 68 - 232
Target Start/End: Original strand, 13393 - 13557
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||||||||||||||||||||||||||||  || || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13393 aaggtaagggtgggactaactttctctaattccaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttttgggaatttgggaattag 13492  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
     | |||||||| |||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  13493 gttttgaagttataattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 13557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 121; Significance: 4e-62; HSPs: 3)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 68 - 232
Target Start/End: Original strand, 169000 - 169164
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||| |||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  169000 aaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 169099  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
     | ||||| |||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||    
T  169100 gttttgaacttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 169164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 63 - 232
Target Start/End: Complemental strand, 143667 - 143498
Alignment:
Q  63 aattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggga 162  Q
    |||| |||||||||||| |||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||   |||||||||    
T  143667 aatttaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttattttaatttggga 143568  T
Q  163 attagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
    ||||  | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  143567 attatgttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 143498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 174334 - 174238
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataa 102  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||| |||||   |||   || ||||||||||||||||| |||| |||| ||||    
T  174334 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaagtaagggtgggactaaccttctttaatcataa 174238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 68 - 232
Target Start/End: Complemental strand, 569 - 405
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||||||||| |||||||||||||||||| ||| || ||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  569 aaggtaagggtgagactaactttctctaattctaagttgtatcattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttggaaattag 470  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
     | ||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  469 gttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 68 - 232
Target Start/End: Complemental strand, 146774 - 146610
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||| ||||||||||||||| |||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  146774 aaggtatgggtgggactaacttactctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 146675  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
     | |||||||| |||||||||||||||||||||| ||||  ||||||||||||||| ||||||||    
T  146674 gttttgaagttataattggttgttaatagagtaggaaatccgttgaatttgtgtagaattgatgt 146610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 110; Significance: 2e-55; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 54 - 232
Target Start/End: Original strand, 328275 - 328455
Alignment:
Q  54 cgatcatctaattcaaggtaagggtgggactaactttctctaattat--aaattatataattctgaaattgagtttagcatgttgtaggttgtagttatg 151  Q
    |||||||||||   ||||||||||||||||||||||||||||||| |  || || |||||||||||||||||||||||||||||| || |||||||||||    
T  328275 cgatcatctaacctaaggtaagggtgggactaactttctctaattctctaagttgtataattctgaaattgagtttagcatgttgaagattgtagttatg 328374  T
Q  152 ggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
    | |||||||||||||| | | ||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  328375 gaaatttgggaattaggtttcgaagttgtaattggttgttaatagagtagaaaatcagttgaatttgtgtagaattgatgt 328455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 220
Target Start/End: Complemental strand, 75834 - 75691
Alignment:
Q  71 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 170  Q
    |||||||||||| ||||||||||||||  ||  || ||||||||||||||||||| ||||||||||| | |||||  | || ||||||||||||||| |     
T  75834 gtaagggtgggattaactttctctaatcttaggttgtataattctgaaattgagtgtagcatgttgttgtttgtaaatttgtgaatttgggaattaggt- 75736  T
Q  171 ttgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtg 220  Q
          ||||||||||||||||||||| ||||||||   |||||||||||    
T  75735 -----tttgtaattggttgttaatagaatagaaaatccattgaatttgtg 75691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 159
Target Start/End: Complemental strand, 110222 - 110133
Alignment:
Q  71 gtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttg 159  Q
    ||||||||| |||||||||||||||||| ||| | ||||||||||| ||||||| |||| || |||||||||||||||| |||| |||||    
T  110222 gtaagggtgagactaactttctctaattctaagtgatataattctgaaaattgaatttaacaagttgtaggttgtagttttggggatttg 110133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 222
Target Start/End: Complemental strand, 72980 - 72841
Alignment:
Q  75 gggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattga 174  Q
    |||||||| |||||||||| |||  ||  || ||||||||| ||||||||||||| ||||||| | | ||        ||||||| ||||||| | ||||    
T  72980 gggtgggattaactttctccaatcttaggttgtataattctaaaattgagtttagtatgttgttgttagt--------gaatttgtgaattaggttttga 72889  T
Q  175 agttgtaattggttgttaatagagtagaaaatatgttgaatttgtgta 222  Q
    ||||||||||||||||||||||| ||||||||   |||||||||||||    
T  72888 agttgtaattggttgttaatagaatagaaaatccattgaatttgtgta 72841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 73180 - 73109
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccgat--catctaattcaaggtaagggtgggactaactttctctaat 97  Q
    ||||||| |||||| ||||||||||| ||   ||||||||  ||||||||||||||||||||||||||||||    
T  73180 gagaagaggagcaagcttgtagagtctgaaaccatctaatgtaaggtaagggtgggactaactttctctaat 73109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 68 - 232
Target Start/End: Complemental strand, 1216 - 1052
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||||||||| ||||||||||  |||||| ||| || ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  1216 aaggtaagggtgtgactaacttttcctaattctaagttgtataattctgaaattgaatttagcatgttttaggttgtagttatgggaatttgggaattag 1117  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattgatgt 232  Q
     | ||||||||||||||||||||||||||| ||||||||  ||||||||||||||| ||||||||    
T  1116 gttttgaagttgtaattggttgttaatagaatagaaaatccgttgaatttgtgtagaattgatgt 1052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 11 - 150
Target Start/End: Complemental strand, 2663 - 2524
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatata 110  Q
    |||||||||||| ||||||||||| ||||||||| |||||| |||||||||||||  | ||||||||||||||||||||||||||||| ||| || ||||    
T  2663 gaagagaagaatcttgtgagaagaggagcaatctcgtagagaccgatcatctaatctacggtaagggtgggactaactttctctaattctaagttgtata 2564  T
Q  111 attctgaaattgagtttagcatgttgtaggttgtagttat 150  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2563 attctgaaattgagtttagcatgttgtaggttgtagttat 2524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 6 - 228
Target Start/End: Complemental strand, 79162 - 78955
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| ||||| |||||| ||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||| ||    
T  79162 tcagagaagataagaattttgtgagaagaggagcaatcttgtagagttcgatcatctaatttaaggtaagggtgagactaactttctctaattctaagtt 79063  T
Q  106 atataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgttaatagagtagaaaa 205  Q
     |||||||||||||||||||||||||||||       |||||||        |||||||||| | ||||||||||||||||||||||||| |||||||||    
T  79062 gtataattctgaaattgagtttagcatgtt-------gtagtta--------tgggaattaggttttgaagttgtaattggttgttaataaagtagaaaa 78978  T
Q  206 tatgttgaatttgtgtagtattg 228  Q
    |   |||||||||||||| ||||    
T  78977 tccattgaatttgtgtagaattg 78955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 99; Significance: 6e-49; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 29574 - 29711
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||||||||||||| ||||| ||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29574 aaggtaagggtgggactaactttctataattctaagttgtataattctgaaattgagtttagcatgtcgtaggttgtagttatgggaatttgggaattag 29673  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaat 206  Q
     | |||||||||||||||||||| ||||| |||||||||    
T  29674 gttttgaagttgtaattggttgtaaatag-gtagaaaat 29711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 191
Target Start/End: Complemental strand, 21662 - 21539
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||||||||||||||| |||||||||||| ||| || ||| |||| |||| ||  |||| ||  | |||| |||||||| ||| |||||||||||||     
T  21662 aaggtaagggtgggactagctttctctaattctaagttgtatgattcagaaactggatttaacagatggtagcttgtagttttggaaatttgggaattat 21563  T
Q  168 atattgaagttgtaattggttgtt 191  Q
     | | |||||||||||||||||||    
T  21562 gtttagaagttgtaattggttgtt 21539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 35541 - 35418
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||||||||| |||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||    
T  35541 aaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggt--tagttttgggaatttgggaattag 35444  T
Q  168 atattgaagttgtaattggttgttaa 193  Q
     | ||||||| |||||||||||||||    
T  35443 gttttgaagtcgtaattggttgttaa 35418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 6 - 119
Target Start/End: Complemental strand, 5746 - 5633
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaatt 105  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||   ||    
T  5746 tcagagaagagaagaatcttgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggtt 5647  T
Q  106 atataattctgaaa 119  Q
     |||||||||||||    
T  5646 gtataattctgaaa 5633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 19315 - 19207
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatata 110  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||| |||||||  || |||||||||||||||||||||||||||| ||| || ||||    
T  19315 gaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatgatctaatctaacgtaagggtgggactaactttctctaattctaagttgtata 19216  T
Q  111 attctgaaa 119  Q
    |||||||||    
T  19215 attctgaaa 19207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 23830 - 23922
Alignment:
Q  5 atcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    ||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  23830 atcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaattcaaggtaagggtgagactagctttctctaat 23922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 68 - 228
Target Start/End: Complemental strand, 19804 - 19652
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||||||||| |||| ||||||||||||| ||| || ||||||||| ||||||||||||||| |||||||| |||        |||||||||||||||    
T  19804 aaggtaagggtgagactgactttctctaattctaagttgtataattctcaaattgagtttagcaagttgtaggctgt--------gaatttgggaattag 19713  T
Q  168 atattgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtagtattg 228  Q
     | || |||||||||||||||||||||||||||||||||   |||||||||||||| ||||    
T  19712 gtttttaagttgtaattggttgttaatagagtagaaaatccattgaatttgtgtagaattg 19652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 223
Target Start/End: Original strand, 112971 - 113123
Alignment:
Q  72 taagggtgggactaactttctctaattataaattatataattctgaaa--ttgagtttagcatgttgtaggttgtagttatgggaatttgggaattagat 169  Q
    ||||||||||||||||||||||||||| ||| | |||||| |||||||  |||| |||| || ||||||||||||| || |||||||||||||||||| |    
T  112971 taagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgtaggttgtaattttgggaatttgggaattaggt 113070  T
Q  170 attgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgtag 223  Q
     | ||||||||||||||||||| | | |||||||||| ||||||||| ||||||    
T  113071 ttagaagttgtaattggttgttta-acagtagaaaatttgttgaattggtgtag 113123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 68 - 185
Target Start/End: Complemental strand, 81618 - 81501
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||||||||||| ||| |||||| |||||   || ||||| ||| |||| |||| || |||||||||||||||| |||||||||||||||||    
T  81618 aaggtaagggtgggactaaccttcactaattctaaatgg-atgattctaaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatta 81520  T
Q  167 gatattgaagttgtaattg 185  Q
    | | | |||||||||||||    
T  81519 ggtttagaagttgtaattg 81501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 117808 - 117899
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg--aaattgagtttagcatgttgtaggttgtagttatgggaatt 157  Q
    ||||||||||||||||||||||||||||||| ||| | |||||| ||||  ||||||| |||| || |||| || ||||| || ||||||||    
T  117808 aaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgaagattgtaattttgggaatt 117899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 191
Target Start/End: Original strand, 6688 - 6809
Alignment:
Q  70 ggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagat 169  Q
    ||||||||||||||||||||||||||||| ||| || ||| ||||||||| ||  |||| || || ||||||||||||| ||| ||||| |||||||| |    
T  6688 ggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttaggaattaggt 6787  T
Q  170 attgaagttgtaattggttgtt 191  Q
     | |||||||||||||||||||    
T  6788 ttagaagttgtaattggttgtt 6809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 2399 - 2506
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatata 110  Q
    ||||||| |||| ||||||||||| ||||||||||||| ||||||| ||||||||| |||||||||||||||||| ||||||||||| ||   || ||||    
T  2399 gaagagaggaatcttgtgagaaga-gagcaatcttgtaaagtccgaacatctaatttaaggtaagggtgggactagctttctctaataatgggttgtata 2497  T
Q  111 attctgaaa 119  Q
    |||||||||    
T  2498 attctgaaa 2506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 13496 - 13572
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaac 87  Q
    |||||||||||| ||||||||||| ||  ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13496 gaagagaagaatcttgtgagaagaggattaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaac 13572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 119
Target Start/End: Original strand, 17913 - 17992
Alignment:
Q  40 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||| ||| || |||||||||||||    
T  17913 aatcttgtagaatccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 52 - 189
Target Start/End: Original strand, 1043 - 1181
Alignment:
Q  52 tccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttat 150  Q
    ||||||||||||||  ||||||||||||||||||||||||||| ||| ||| |  |||||||||| ||||||| |||| || ||||||||||| |||| |    
T  1043 tccgatcatctaatctaaggtaagggtgggactaactttctcttattctaagtgttataattctgaaaattgaatttaacaagttgtaggttggagtttt 1142  T
Q  151 gggaatttgggaattagatattgaagttgtaattggttg 189  Q
    | |||||||||| ||||   | |||||||||||| ||||    
T  1143 gagaatttgggatttagggttagaagttgtaattagttg 1181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 11055 - 10969
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    |||||||||||| ||||||||||| ||||||||||||||| || |||||||||||  ||||||||||||| |||| |||||||||||    
T  11055 gaagagaagaatcttgtgagaagaggagcaatcttgtagaatctgatcatctaatataaggtaagggtggaactagctttctctaat 10969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 71 - 184
Target Start/End: Complemental strand, 10846 - 10741
Alignment:
Q  71 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 170  Q
    |||||||||||| ||||||||||||||| ||  || ||||||||||||||||||||||||||||||| | ||||        ||||||||||||||| |     
T  10846 gtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgt--------gaatttgggaattaggtt 10755  T
Q  171 ttgaagttgtaatt 184  Q
    ||||||||||||||    
T  10754 ttgaagttgtaatt 10741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 55; Significance: 1e-22; HSPs: 6)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 71 - 206
Target Start/End: Complemental strand, 5310 - 5183
Alignment:
Q  71 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 170  Q
    |||||||||||| ||||||||||||||  ||  || ||||||||||||||||||||| ||||||||| | ||||        ||||||||||||||  |     
T  5310 gtaagggtgggattaactttctctaatcttaggttgtataattctgaaattgagttttgcatgttgttgtttgt--------gaatttgggaattacgtt 5219  T
Q  171 ttgaagttgtaattggttgttaatagagtagaaaat 206  Q
    ||||||||||||||||||||||||||| ||||||||    
T  5218 ttgaagttgtaattggttgttaatagaatagaaaat 5183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 71 - 206
Target Start/End: Complemental strand, 11430 - 11303
Alignment:
Q  71 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 170  Q
    |||||||||||| ||||||||||||||  ||  || ||| ||||||||||||||||| ||||||||| | ||||        ||||||||||||||| |     
T  11430 gtaagggtgggattaactttctctaatcttaggttgtatcattctgaaattgagttttgcatgttgttgtttgt--------gaatttgggaattaggtt 11339  T
Q  171 ttgaagttgtaattggttgttaatagagtagaaaat 206  Q
    ||||||||||||||||||||||||||| ||||||||    
T  11338 ttgaagttgtaattggttgttaatagaatagaaaat 11303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 71 - 221
Target Start/End: Complemental strand, 19754 - 19605
Alignment:
Q  71 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagata 170  Q
    ||||| |||||| ||| ||||||||||  ||  |||||||||||||||||||||||||||||||||| | ||||   | || ||||||| ||||||| |     
T  19754 gtaagtgtgggattaaatttctctaatcttaggttatataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaatttgagaattaggtt 19655  T
Q  171 ttgaagttgtaattggttgttaatagagtagaaaatatgttgaatttgtgt 221  Q
     |||||||||||||| ||||||||| | ||||||||   ||||||||||||    
T  19654 atgaagttgtaattgattgttaata-aatagaaaatccattgaatttgtgt 19605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 5545 - 5454
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||| ||||||||| |||||| || ||||||||||  |||||||||||||||||| ||||||||||| || | || |||||||||||||    
T  5545 gagaagaggagcaatctcgtagagaccaatcatctaatctaaggtaagggtgggactacctttctctaataatgagttgtataattctgaaa 5454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 11707 - 11639
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaa 96  Q
    ||||||| ||||||||| | |||| |||||||||||||  ||| ||||||||||||||| |||||||||    
T  11707 gagaagaggagcaatctcgcagagaccgatcatctaatgtaagataagggtgggactaaatttctctaa 11639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 19947 - 19878
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    ||||||| ||||||||| |||||  |||||||||||||  ||||||||||| ||||||  ||||||||||    
T  19947 gagaagaggagcaatctcgtagaaaccgatcatctaatctaaggtaagggtaggactagatttctctaat 19878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 222
Target Start/End: Complemental strand, 2940 - 2793
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||| ||||||||||||||| ||  || ||||||||||||||||||||||||||||||| | ||||        ||||||| |||||||    
T  2940 aaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgt--------gaatttgtgaattag 2849  T
Q  168 atattgaagttgt-aattggttgttaatagagtagaaaatatgttgaatttgtgta 222  Q
     | ||||| | || ||||||||||||||||| ||||||||   |||||||||||||    
T  2848 gttttgaattagtaaattggttgttaatagaatagaaaatcctttgaatttgtgta 2793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 135505 - 135625
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||||||||||| ||| |||||| ||| |  ||||||||||||| |||| |||| || |||||||||||||||| |||||||||||||||||    
T  135505 aaggtaagggtgggactaaccttcactaattctaagtg-tataattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatta 135603  T
Q  167 gatattgaagttgtaattggtt 188  Q
    ||  | ||||||| ||||||||    
T  135604 gagttagaagttgaaattggtt 135625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 68 - 191
Target Start/End: Original strand, 10756 - 10877
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||||||||||||||||||| ||| || ||| ||| ||||| ||  |||| || |||||||||| ||||| ||||||||||||||||||    
T  10756 aaggtaagggtgggactaactttctctaattctaagttgtatgattgtgaaactggatttaacaggttgtaggtt-tagtt-tgggaatttgggaattag 10853  T
Q  168 atattgaagttgtaattggttgtt 191  Q
       | |||||||||||||||||||    
T  10854 ggttagaagttgtaattggttgtt 10877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 68 - 142
Target Start/End: Original strand, 5046 - 5120
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggtt 142  Q
    ||||||||||||||||||||||||||||||| ||| || ||| ||| ||||| ||  |||| || ||||||||||    
T  5046 aaggtaagggtgggactaactttctctaattctaagttgtatgattgtgaaactggatttaacaagttgtaggtt 5120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 119
Target Start/End: Original strand, 61821 - 61900
Alignment:
Q  40 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||||||| ||||||||||||||  |||||||||||| |||||||||||||||||| ||| || |||||||||||||    
T  61821 aatcttgtagaatccgatcatctaatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 61900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 73 - 191
Target Start/End: Complemental strand, 16650 - 16532
Alignment:
Q  73 aagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatatt 172  Q
    |||||||||||||| ||| ||||||| ||| || ||| ||||||||| ||  |||| ||||| ||||||||||||| ||| ||||||| |||||| | |     
T  16650 aagggtgggactaaatttatctaattctaagttgtatgattctgaaactggatttaacatgtggtaggttgtagttttggaaatttggcaattaggttta 16551  T
Q  173 gaagttgtaattggttgtt 191  Q
    |||||||||||||||||||    
T  16550 gaagttgtaattggttgtt 16532  T

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Target: scaffold0802 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 187
Target Start/End: Original strand, 4710 - 4830
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    ||||||||||||||||||||||||||||||| ||| |  |||||||||| ||||||| |||| || ||||||||||| ||||   ||||||||| |||||    
T  4710 aaggtaagggtgggactaactttctctaattctaagtagtataattctgaaaattgaatttaacaagttgtaggttgaagtttgtggaatttggaaatta 4809  T
Q  167 gatattgaagttgtaattggt 187  Q
    | | | |||||||| ||||||    
T  4810 ggtttagaagttgtcattggt 4830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 11099 - 11190
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    |||| |||||||||||| || ||||||||  ||||||||| ||| ||||||||| |||||| ||||||||| |||||||| |||||||||||    
T  11099 tcagagaagagaagaatcttctgagaagagaagcaatcttttagtgtccgatcacctaatttaaggtaaggatgggactagctttctctaat 11190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 18613 - 18670
Alignment:
Q  40 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||    
T  18613 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactagctttctctaat 18670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 20005 - 19906
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    ||||||||||||||||||||||||||||||| ||| |  |||||||||| ||||||  |||| || |||||||||||||||| |||| ||||| ||||||    
T  20005 aaggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttgtagtt-tggggatttgagaatta 19907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 28659 - 28583
Alignment:
Q  11 gaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaac 87  Q
    ||||| || ||| ||||||||||| ||||||||||||||||||| ||||||||||  |||||||| |||||||||||    
T  28659 gaagaaaataatcttgtgagaagaggagcaatcttgtagagtcctatcatctaatctaaggtaagagtgggactaac 28583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 71 - 206
Target Start/End: Original strand, 26638 - 26767
Alignment:
Q  71 gtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagat 169  Q
    |||||||||||| ||||||||| ||||| ||  || |||||||||| ||||||||||||||||||||| | ||||        ||||||||||||||| |    
T  26638 gtaagggtgggattaactttctttaattttaggttgtataattctgaaaattgagtttagcatgttgttgtttgt--------gaatttgggaattaggt 26729  T
Q  170 attgaagttgtaa-ttggttgttaatagagtagaaaat 206  Q
     ||||| | |||| ||||||||||||||||||||||||    
T  26730 tttgaattagtaatttggttgttaatagagtagaaaat 26767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 189
Target Start/End: Complemental strand, 8693 - 8571
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttggg-aatt 165  Q
    |||||||||||||||||||| ||| |||||| ||| |  ||| ||||||||| |||| |||| || |||||||||||||||| |||||||||||| ||||    
T  8693 aaggtaagggtgggactaaccttcactaattctaagtg-tatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaaatt 8595  T
Q  166 agatattgaagttgtaattggttg 189  Q
    ||   | |||||||||||||||||    
T  8594 agggttagaagttgtaattggttg 8571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 191
Target Start/End: Original strand, 106052 - 106175
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||||||||| |||||||||||||||||| ||| || ||| |||| |||| ||  |||| || || ||||  ||||||| ||| ||||||||||||||    
T  106052 aaggtaagggtgtgactaactttctctaattctaagttgtatgattcggaaactggatttaacaggtggtagactgtagttttggaaatttgggaattag 106151  T
Q  168 atattgaagttgtaattggttgtt 191  Q
     | | || ||||||||||||||||    
T  106152 gtttagacgttgtaattggttgtt 106175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 189
Target Start/End: Original strand, 3052 - 3174
Alignment:
Q  67 caaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatt 165  Q
    ||||||||||||||||||||| |||  ||||| ||| |  ||| ||||||||| |||| |||| || |||||||||||||||| ||||||||| ||||||    
T  3052 caaggtaagggtgggactaaccttcaataattctaagtg-tattattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttaggaatt 3150  T
Q  166 agatattgaagttgtaattggttg 189  Q
    ||   | |||||||||||||||||    
T  3151 agggttagaagttgtaattggttg 3174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 2071 - 2143
Alignment:
Q  117 aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttg 189  Q
    ||||||| |||| ||||||||||||||||||| ||| |||||||||||||| | |  ||||||||||||||||    
T  2071 aaattgaatttaacatgttgtaggttgtagttttggaaatttgggaattaggtttataagttgtaattggttg 2143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 10385 - 10481
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataa 102  Q
    |||| |||||||| ||| ||||||||||| ||||||||||||||||| |||||   |||   |||||||||||||||||||| |||| |||| ||||    
T  10385 tcagagaagagaataatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaggtaagggtgggactaaccttctttaatcataa 10481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 3987 - 3935
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatc 58  Q
    |||| |||||||||||| |||||||||||||||||||||| |||||| |||||    
T  3987 tcagagaagagaagaatcttgtgagaagatgagcaatcttatagagttcgatc 3935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 60946 - 60846
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    ||||||||| || ||||||| |||| ||||| ||| || ||||||||||| |||||| |||| ||||||||||||||||||| || | ||||| ||||||    
T  60946 aaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaatta 60847  T
Q  167 g 167  Q
    |    
T  60846 g 60846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 119
Target Start/End: Complemental strand, 2960 - 2881
Alignment:
Q  40 aatcttgtagagtccgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    |||||||||||||| |||||| ||||  |||||||||||||||||| ||||||||||| ||   || |||||||||||||    
T  2960 aatcttgtagagtctgatcatttaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 2881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 68 - 189
Target Start/End: Complemental strand, 7328 - 7205
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgg-gaatt 165  Q
    ||||| |||||||||||||| |||| ||||| ||| || |||||||||| ||||||  |||  ||||||||||||| ||||| |||||||||||  ||||    
T  7328 aaggtgagggtgggactaacattctttaattctaagttgtataattctgaaaattggatttgacatgttgtaggttatagttttgggaatttggaaaatt 7229  T
Q  166 agatattgaagttgtaattggttg 189  Q
    ||   | |||||||||||||||||    
T  7228 agggttagaagttgtaattggttg 7205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 126313 - 126404
Alignment:
Q  76 ggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||||||||||||||||||||| ||| || ||| ||||||||||||  |||| || ||||||| |||||||| || | ||||| |||||||    
T  126313 ggtgggactaactttctctaattctaagttgtatgattctgaaattggatttaacaagttgtagattgtagttttgaggatttgagaattag 126404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 137
Target Start/End: Original strand, 1855 - 1917
Alignment:
Q  75 gggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgt 137  Q
    |||||||||||||||||||||||| ||| |  ||||||||||||||||| |||| ||||||||    
T  1855 gggtgggactaactttctctaattctaagtggtataattctgaaattgaatttaacatgttgt 1917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 2187 - 2252
Alignment:
Q  54 cgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    |||||||||||   ||||||||||||||||||| ||||||||||| ||| || |||||||||||||    
T  2187 cgatcatctaacctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaa 2252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 5292 - 5353
Alignment:
Q  54 cgatcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattct 115  Q
    |||||||||||   ||||||||||||||||||||||||||||||| ||| || |||||||||    
T  5292 cgatcatctaacctaaggtaagggtgggactaactttctctaattttaagttgtataattct 5353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 20087 - 20202
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||| ||||||||| ||| |||||| ||| |  ||||||||||||| |||| |||| || |||||||||| ||||| |||||||||||||||||    
T  20087 aaggtaagggcgggactaaccttcactaattctaagtg-tataattctgaaaattgaatttaacaggttgtaggttatagtt-tgggaatttgggaatta 20184  T
Q  167 gatattgaagttgtaatt 184  Q
      | | ||||||||||||    
T  20185 tgtttagaagttgtaatt 20202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 2051 - 1970
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatcatctaattcaaggtaagggtgggactaac 87  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||| |||||   ||    ||||||||||||||||||||    
T  2051 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattatgctaaggtaagggtgggactaac 1970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 164
Target Start/End: Complemental strand, 67172 - 67075
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaat 164  Q
    ||||||| |||||||||||||||||||||||  || |  |||||||||| ||||||  |||| ||  ||||||||||||||| | |||||||||||||    
T  67172 aaggtaaaggtgggactaactttctctaattcgaagtggtataattctgaaaattggatttaacaaattgtaggttgtagttttaggaatttgggaat 67075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 5712 - 5761
Alignment:
Q  72 taagggtgggactaactttctctaattataaattatataattctgaaatt 121  Q
    ||||||||||||||||||||||||||| ||| || |||||||||||||||    
T  5712 taagggtgggactaactttctctaattctaagttgtataattctgaaatt 5761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 12403 - 12323
Alignment:
Q  111 attctgaaattgagtttagcatg-ttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttgt 190  Q
    ||||||||||||| |||| |||| ||||||||||||||| ||| |||||| ||||||| | | ||||||||||| ||||||    
T  12403 attctgaaattgaatttaacatggttgtaggttgtagttttggaaatttgagaattaggtttagaagttgtaataggttgt 12323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 12002 - 11950
Alignment:
Q  6 tcagggaagagaagaatgttgtgagaagatgagcaatcttgtagagtccgatc 58  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  12002 tcagagaagagaagaatcttgtgagaagaggagcaatcttgtagagttcgatc 11950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 127302 - 127373
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccg--atcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    ||||||| |||||| ||||||||||| |  ||||||||||  |||||||||||||||||| |||||||||||    
T  127302 gagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 127373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 9110 - 9012
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||||||||||||||||| |||  ||||| | | | || ||||||||||| ||  |||| || |||||||||||||||| | ||||||||||||||||    
T  9110 aaggtaagggtgggactaaccttcagtaattctgagt-atgtaattctgaaactggatttaacaggttgtaggttgtagtttttggaatttgggaattag 9012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 5080 - 5029
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||||||||||||||||||||||||||| ||| | || |||||||||||    
T  5080 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 5029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 5080 - 5029
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||||||||||||||||||||||||||| ||| | || |||||||||||    
T  5080 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 5029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 15323 - 15272
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||||||||||||||||||||||||||| ||| || ||| |||||||||    
T  15323 aaggtaagggtgggactaactttctctaattctaagttgtattattctgaaa 15272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 69854 - 69905
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||||||||||||||||||||||||||| ||| | || |||||||||||    
T  69854 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 69905  T

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Target: scaffold0671 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 4991 - 4910
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgtaggttgtagtt 148  Q
    |||||||||||||||||||| |||| ||||| ||| || ||||||||||| | |||  |||| ||||||||||| |||||||    
T  4991 aaggtaagggtgggactaaccttctttaattctaagttgtataattctgagagttggatttaacatgttgtaggatgtagtt 4910  T

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Target: scaffold0261 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 6620 - 6669
Alignment:
Q  154 aatttgggaattagatattgaagttgtaattggttgttaatagagtagaa 203  Q
    |||||||||||||| | |||| || |||||||||||||||||||||||||    
T  6620 aatttgggaattaggttttgatgtcgtaattggttgttaatagagtagaa 6669  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 148
Target Start/End: Complemental strand, 96446 - 96369
Alignment:
Q  71 gtaagggtgggactaactttctctaattataaattatataattctgaaattgagtttagcatgttgtaggttgtagtt 148  Q
    |||| ||||||||||||||||||||||| | | || ||| ||||||||| ||  |||| || ||||||||||||||||    
T  96446 gtaaaggtgggactaactttctctaattctgagttgtatgattctgaaaatggatttaacaagttgtaggttgtagtt 96369  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 148
Target Start/End: Complemental strand, 398613 - 398532
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgtaggttgtagtt 148  Q
    |||||||||||||||||||| |||| ||||| ||  || ||||||||||| |||||  |||| ||||||||||| |||||||    
T  398613 aaggtaagggtgggactaaccttctttaattctaggttgtataattctgagaattggatttaacatgttgtaggatgtagtt 398532  T

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Target: scaffold0589 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 4436 - 4336
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    ||||||| | |||||||||| |||| ||||| ||| || ||||||||||| || ||  |||| ||||||||||||||||||| || | ||||| ||||||    
T  4436 aaggtaacgatgggactaaccttctttaattctaagttgtataattctgagaactggatttaacatgttgtaggttgtagttttgaggatttgagaatta 4337  T
Q  167 g 167  Q
    |    
T  4336 g 4336  T

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Target: scaffold0151 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 31159 - 31061
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||||||||||| |||  ||||| |  | ||| |||||||| ||||||  |||| || |||||||||||||||| |||||||||||||||||    
T  31159 aaggtaagggtgggactaaccttcaataattct-gagtatgtaattctgaaaattggatttaacaagttgtaggttgtagtt-tgggaatttgggaatta 31062  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 167
Target Start/End: Original strand, 158823 - 158922
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||||||||||| |||  ||||| | | | |||| ||||| ||| |||  |||| || |||||||||||||||| |||||||||||||||||    
T  158823 aaggtaagggtgggactaaccttcaataattctgagt-atatgattctaaaaattggatttaacaagttgtaggttgtagttttgggaatttgggaatta 158921  T

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Target: scaffold0878 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 97
Target Start/End: Original strand, 3383 - 3452
Alignment:
Q  29 agaagatgagcaatcttgtagagtccga--tcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    |||||| |||||| ||| ||||||||||  |||||||||  |||||||||||||||||| |||||||||||    
T  3383 agaagaggagcaagctt-tagagtccgaaatcatctaatctaaggtaagggtgggactagctttctctaat 3452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 9011 - 8960
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||||||||||||||||||||||||||| ||| |  | |||||||||||    
T  9011 aaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 8960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 167
Target Start/End: Complemental strand, 13455 - 13392
Alignment:
Q  105 tatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    ||||| ||||||||| |||| |||| || ||||||||||| |||| ||||||||||||||||||    
T  13455 tatatgattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttgggaattag 13392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 21148 - 21097
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||||||||||||||||||||||||||| ||| |  | |||||||||||    
T  21148 aaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 21097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 34163 - 34112
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||||||||||||||||||||||||||| ||| |  | |||||||||||    
T  34163 aaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 34112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 11232 - 11193
Alignment:
Q  40 aatcttgtagagtccgatcatctaattcaaggtaagggtg 79  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  11232 aatcttgtagagtccgatcatctaatctaaggtaagggtg 11193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 166
Target Start/End: Complemental strand, 29439 - 29340
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||||||||||  |||| ||||| ||| || ||| |||||| ||| ||  |||| || |||||||||||||||| |||| ||||| ||||||    
T  29439 aaggtaagggtgggactaatcttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttggggatttgagaatta 29340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 189
Target Start/End: Complemental strand, 4690 - 4612
Alignment:
Q  111 attctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattagatattgaagttgtaattggttg 189  Q
    ||||| ||||||| |||| || ||| |||||||| ||| |||||||||| ||||||| | | |||||||||||| ||||    
T  4690 attctaaaattgaatttaacaggttttaggttgtggttttgggaatttgagaattaggtttagaagttgtaattagttg 4612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 98
Target Start/End: Original strand, 197 - 227
Alignment:
Q  68 aaggtaagggtgggactaactttctctaatt 98  Q
    |||||||||||||||||||||||||||||||    
T  197 aaggtaagggtgggactaactttctctaatt 227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 35501 - 35563
Alignment:
Q  105 tatataattctgaaa-ttgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    ||||| ||||||||| |||| |||| ||  ||||||||||||||| |||||||||||||||||    
T  35501 tatatgattctgaaaattgaatttaacaacttgtaggttgtagttttgggaatttgggaatta 35563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 14546 - 14638
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccg--atcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||| |||||| ||| |||||||||  ||||||||||  |||||||||||| ||||| ||||||||||| ||   || |||||||||||||    
T  14546 gagaagaagagcaagctt-tagagtccggaatcatctaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 14638  T

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Target: scaffold0061; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 23604 - 23696
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccg--atcatctaattcaaggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||| |||||| ||| |||||||||  ||||||||||  |||||||||||| ||||| ||||||||||| ||   || |||||||||||||    
T  23604 gagaagaagagcaagctt-tagagtccggaatcatctaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 23696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 510 - 449
Alignment:
Q  107 tataattctgaaattgagtttagcatgttgtaggttgtagttatg-ggaatttgggaattag 167  Q
    ||||||||||||||||  |||| ||||||||||||| ||||| || ||| ||||||||||||    
T  510 tataattctgaaattggatttaacatgttgtaggttatagttttgaggattttgggaattag 449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 4999 - 4958
Alignment:
Q  56 atcatctaattcaaggtaagggtgggactaactttctctaat 97  Q
    ||||||||||  |||||||||||||||||| |||||||||||    
T  4999 atcatctaatataaggtaagggtgggactagctttctctaat 4958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 113
Target Start/End: Complemental strand, 11680 - 11635
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataatt 113  Q
    |||||||||||| |||||||| ||  ||||||||||||||||||||    
T  11680 aaggtaagggtgagactaactctcaataattataaattatataatt 11635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 26776 - 26727
Alignment:
Q  70 ggtaagggtgggactaactttctctaattataaattatataattctgaaa 119  Q
    ||||||||||||| ||||||||||||||| ||  || |||||||||||||    
T  26776 ggtaagggtgggattaactttctctaattttaggttgtataattctgaaa 26727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 5417 - 5319
Alignment:
Q  68 aaggtaagggtgggactaactttctctaattataaattatataattctg-aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 166  Q
    |||||||||||||||||||| ||| |||||| | || | ||| |||||| ||||||| |||| |||| ||||| |||||||| || ||||| ||||||||    
T  5417 aaggtaagggtgggactaaccttcactaattct-aagtgtatgattctgaaaattgaatttaacatg-tgtagattgtagttttgtgaattcgggaatta 5320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 15576 - 15638
Alignment:
Q  28 gagaagatgagcaatcttgtagagtccga--tcatctaattcaaggtaagggtgggactaactt 89  Q
    ||||||| |||||| ||| ||||||||||  |||||||||  ||||||||||||||||||||||    
T  15576 gagaagaggagcaagctt-tagagtccgaaatcatctaatctaaggtaagggtgggactaactt 15638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 167
Target Start/End: Original strand, 52549 - 52645
Alignment:
Q  72 taagggtgggactaactttctctaattataaattatataattctga-aattgagtttagcatgttgtaggttgtagttatgggaatttgggaattag 167  Q
    |||||||||||||||| |||  ||||| ||| || | ||||||||| |||||  |||| ||||||||||| ||||||| || | ||||| |||||||    
T  52549 taagggtgggactaaccttcattaattctaagttgtgtaattctgagaattggatttaacatgttgtaggatgtagttttgaggatttgagaattag 52645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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