View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8810A_low_231 (Length: 248)
Name: NF8810A_low_231
Description: NF8810A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8810A_low_231 |
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Alignment Details
Target: chr2 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 6917705 - 6917921
Alignment:
| Q |
1 |
gtgataagtaatttttgcactatttgatgactgttcttggcacacatgcatgctgtttccacgcctgtgttatggttggttgagaggctatgatgttaac |
100 |
Q |
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| T |
6917705 |
gtgataagtaatttttgcactatttgatgactgttcttggcacatatgcatgatgtttccacgcctgtgttatggttggttgagaggctatgatgttaac |
6917804 |
T |
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| Q |
101 |
ataatttgtccactggtgttgaaaagtcaaatggcttatgtcatgagaacaacaaggttacatggtcgtttccaagatcaatggtaaaggttaaaaactt |
200 |
Q |
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| T |
6917805 |
ataatttgtccactggtgttgaaaagtcaaatggcttatgtcatgagaacaacaaggttacatggtcatttccaagatcaacggtaaaggttaaaaactt |
6917904 |
T |
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| Q |
201 |
gaagtaatggtaatttg |
217 |
Q |
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||||||||||||||||| |
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| T |
6917905 |
gaagtaatggtaatttg |
6917921 |
T |
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