View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8810A_low_33 (Length: 412)

Name: NF8810A_low_33
Description: NF8810A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8810A_low_33
NF8810A_low_33
[»] chr8 (12 HSPs)
chr8 (4-397)||(20649849-20650242)
chr8 (4-396)||(21194047-21194439)
chr8 (4-394)||(22437184-22437574)
chr8 (4-397)||(21847831-21848224)
chr8 (4-373)||(23903056-23903424)
chr8 (4-397)||(16414985-16415373)
chr8 (4-100)||(24931619-24931711)
chr8 (15-96)||(23154838-23154919)
chr8 (205-256)||(16268859-16268910)
chr8 (214-256)||(28984015-28984057)
chr8 (214-256)||(28989234-28989276)
chr8 (214-256)||(31414167-31414209)
[»] chr3 (18 HSPs)
chr3 (4-397)||(6150143-6150536)
chr3 (4-393)||(17201092-17201482)
chr3 (4-397)||(8271689-8272082)
chr3 (4-395)||(30149814-30150205)
chr3 (4-397)||(13964645-13965035)
chr3 (21-397)||(22150036-22150403)
chr3 (154-397)||(15943885-15944128)
chr3 (4-144)||(15948014-15948154)
chr3 (4-103)||(15612559-15612658)
chr3 (4-100)||(30140263-30140359)
chr3 (4-72)||(12796024-12796092)
chr3 (4-72)||(16258930-16258998)
chr3 (4-72)||(18915514-18915582)
chr3 (205-256)||(10408626-10408677)
chr3 (205-256)||(12509903-12509954)
chr3 (205-256)||(28756977-28757028)
chr3 (205-256)||(47126602-47126653)
chr3 (214-256)||(31692605-31692647)
[»] chr2 (10 HSPs)
chr2 (6-405)||(22739237-22739636)
chr2 (4-397)||(22280564-22280957)
chr2 (4-260)||(25131068-25131324)
chr2 (4-231)||(24567425-24567652)
chr2 (8-100)||(25878531-25878623)
chr2 (4-72)||(12638818-12638886)
chr2 (4-72)||(12644485-12644553)
chr2 (4-72)||(24829105-24829172)
chr2 (4-71)||(34821609-34821675)
chr2 (216-256)||(23113394-23113434)
[»] chr6 (15 HSPs)
chr6 (4-396)||(16100707-16101099)
chr6 (4-395)||(16379571-16379962)
chr6 (4-397)||(16647165-16647558)
chr6 (4-260)||(18401337-18401593)
chr6 (221-397)||(14149316-14149492)
chr6 (4-168)||(1646239-1646403)
chr6 (4-103)||(18578113-18578212)
chr6 (40-224)||(14133824-14133993)
chr6 (4-103)||(23025251-23025350)
chr6 (4-103)||(16235051-16235149)
chr6 (8-100)||(19985697-19985789)
chr6 (4-72)||(18836178-18836246)
chr6 (308-405)||(21412714-21412811)
chr6 (216-255)||(18182705-18182744)
chr6 (214-280)||(21474502-21474568)
[»] chr4 (9 HSPs)
chr4 (2-397)||(14999472-14999867)
chr4 (4-397)||(15290209-15290602)
chr4 (6-404)||(12339909-12340309)
chr4 (4-103)||(9292994-9293093)
chr4 (4-103)||(15139015-15139113)
chr4 (205-256)||(3261986-3262037)
chr4 (205-256)||(7357296-7357347)
chr4 (205-256)||(11204424-11204475)
chr4 (205-256)||(29450729-29450780)
[»] scaffold0225 (1 HSPs)
scaffold0225 (4-397)||(26253-26646)
[»] scaffold0021 (6 HSPs)
scaffold0021 (4-397)||(90359-90752)
scaffold0021 (4-397)||(8014-8407)
scaffold0021 (69-397)||(20930-21257)
scaffold0021 (69-397)||(30506-30833)
scaffold0021 (4-50)||(21255-21301)
scaffold0021 (4-50)||(30831-30877)
[»] scaffold0141 (1 HSPs)
scaffold0141 (4-397)||(23820-24213)
[»] scaffold0008 (2 HSPs)
scaffold0008 (4-397)||(131543-131936)
scaffold0008 (4-397)||(26634-27026)
[»] chr1 (14 HSPs)
chr1 (4-397)||(20527896-20528289)
chr1 (4-393)||(20927897-20928286)
chr1 (4-395)||(20828517-20828908)
chr1 (4-257)||(22133015-22133268)
chr1 (4-361)||(41215019-41215372)
chr1 (251-404)||(22129555-22129708)
chr1 (10-298)||(20172011-20172300)
chr1 (205-256)||(20074973-20075024)
chr1 (205-256)||(20297456-20297507)
chr1 (205-256)||(31537261-31537312)
chr1 (205-256)||(38910090-38910141)
chr1 (205-256)||(48425948-48425999)
chr1 (205-256)||(52988816-52988867)
chr1 (216-252)||(16379149-16379185)
[»] scaffold0561 (1 HSPs)
scaffold0561 (4-394)||(6061-6452)
[»] chr7 (19 HSPs)
chr7 (1-396)||(4442741-4443136)
chr7 (4-395)||(7826717-7827108)
chr7 (4-395)||(27104836-27105227)
chr7 (4-395)||(27173098-27173489)
chr7 (4-388)||(13458852-13459234)
chr7 (130-325)||(14207264-14207456)
chr7 (130-325)||(14215954-14216146)
chr7 (4-103)||(11284627-11284726)
chr7 (140-355)||(22034950-22035165)
chr7 (177-355)||(17142404-17142582)
chr7 (4-69)||(17926436-17926501)
chr7 (60-273)||(17131545-17131758)
chr7 (205-256)||(21755431-21755482)
chr7 (205-256)||(26115769-26115820)
chr7 (205-256)||(13965847-13965898)
chr7 (205-256)||(26091977-26092028)
chr7 (205-256)||(40924996-40925047)
chr7 (205-256)||(49155320-49155371)
chr7 (331-404)||(14218206-14218279)
[»] scaffold0218 (1 HSPs)
scaffold0218 (4-397)||(1006-1399)
[»] scaffold0467 (2 HSPs)
scaffold0467 (4-394)||(678-1068)
scaffold0467 (162-394)||(13388-13620)
[»] scaffold0120 (1 HSPs)
scaffold0120 (4-397)||(25035-25429)
[»] scaffold0011 (4 HSPs)
scaffold0011 (4-397)||(73651-74044)
scaffold0011 (4-397)||(78032-78425)
scaffold0011 (91-397)||(181934-182240)
scaffold0011 (6-263)||(175701-175958)
[»] scaffold0170 (1 HSPs)
scaffold0170 (4-394)||(34942-35332)
[»] chr5 (8 HSPs)
chr5 (4-397)||(23508426-23508810)
chr5 (4-397)||(24583952-24584336)
chr5 (4-175)||(21934643-21934814)
chr5 (4-72)||(23505316-23505383)
chr5 (205-256)||(14884365-14884416)
chr5 (205-256)||(20345225-20345276)
chr5 (205-256)||(22505622-22505673)
chr5 (205-281)||(25851015-25851091)
[»] scaffold0124 (1 HSPs)
scaffold0124 (4-397)||(4859-5253)
[»] scaffold0465 (1 HSPs)
scaffold0465 (4-397)||(12679-13072)
[»] scaffold0302 (1 HSPs)
scaffold0302 (4-397)||(1068-1461)
[»] scaffold0266 (1 HSPs)
scaffold0266 (4-397)||(6914-7308)
[»] scaffold0673 (1 HSPs)
scaffold0673 (4-375)||(5380-5751)
[»] scaffold0962 (1 HSPs)
scaffold0962 (4-361)||(2431-2785)
[»] scaffold0610 (1 HSPs)
scaffold0610 (4-396)||(3958-4349)
[»] scaffold0162 (2 HSPs)
scaffold0162 (4-394)||(15767-16157)
scaffold0162 (4-72)||(10553-10621)
[»] scaffold0138 (1 HSPs)
scaffold0138 (140-396)||(25755-26012)
[»] scaffold0112 (1 HSPs)
scaffold0112 (4-370)||(3356-3722)
[»] scaffold0462 (2 HSPs)
scaffold0462 (153-397)||(2703-2953)
scaffold0462 (4-117)||(2579-2692)
[»] scaffold0233 (1 HSPs)
scaffold0233 (9-370)||(20807-21168)
[»] scaffold0058 (1 HSPs)
scaffold0058 (56-370)||(77339-77653)
[»] scaffold0269 (1 HSPs)
scaffold0269 (4-103)||(2335-2434)
[»] scaffold0244 (1 HSPs)
scaffold0244 (4-103)||(24913-25012)
[»] scaffold0615 (1 HSPs)
scaffold0615 (240-394)||(9429-9583)
[»] scaffold0009 (1 HSPs)
scaffold0009 (258-396)||(96637-96775)
[»] scaffold1164 (1 HSPs)
scaffold1164 (46-138)||(2292-2384)
[»] scaffold0342 (1 HSPs)
scaffold0342 (4-100)||(3340-3436)
[»] scaffold0028 (1 HSPs)
scaffold0028 (4-100)||(93791-93887)
[»] scaffold1486 (1 HSPs)
scaffold1486 (4-95)||(364-455)
[»] scaffold0139 (1 HSPs)
scaffold0139 (4-103)||(17696-17794)
[»] scaffold0023 (1 HSPs)
scaffold0023 (4-95)||(53967-54058)
[»] scaffold0102 (1 HSPs)
scaffold0102 (4-103)||(46431-46529)
[»] scaffold0092 (1 HSPs)
scaffold0092 (4-72)||(929-997)
[»] scaffold0022 (1 HSPs)
scaffold0022 (4-78)||(8199-8273)
[»] scaffold0409 (2 HSPs)
scaffold0409 (4-72)||(3331-3399)
scaffold0409 (4-72)||(11586-11654)
[»] scaffold0335 (1 HSPs)
scaffold0335 (4-72)||(10757-10826)
[»] scaffold1424 (1 HSPs)
scaffold1424 (4-72)||(131-198)
[»] scaffold0066 (1 HSPs)
scaffold0066 (4-72)||(51698-51766)
[»] scaffold1488 (1 HSPs)
scaffold1488 (4-54)||(202-252)
[»] scaffold0293 (1 HSPs)
scaffold0293 (216-255)||(15479-15518)
[»] scaffold0088 (1 HSPs)
scaffold0088 (205-256)||(29992-30043)
[»] scaffold0068 (1 HSPs)
scaffold0068 (205-256)||(67303-67354)
[»] scaffold0041 (1 HSPs)
scaffold0041 (205-256)||(41793-41844)
[»] scaffold0010 (1 HSPs)
scaffold0010 (205-256)||(39528-39579)
[»] scaffold0001 (1 HSPs)
scaffold0001 (205-256)||(514548-514599)
[»] scaffold0585 (1 HSPs)
scaffold0585 (214-256)||(4284-4326)
[»] scaffold0077 (1 HSPs)
scaffold0077 (238-271)||(29941-29974)


Alignment Details
Target: chr8 (Bit Score: 270; Significance: 1e-151; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 4 - 397
Target Start/End: Complemental strand, 20650242 - 20649849
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||     
T  20650242 aatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaacattaccaaaattaacaggacacttatcacacat 20650143  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| || |  |||||||  || |||||  | |||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  20650142 aaaagaagtagtcaccgaaccgctggtcggggtgtcaataaccatcccccgcaacaaaggagttacaaccaatttcaaacgctcaacacaactaaccgag 20650043  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  20650042 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 20649943  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    | ||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||| ||||  ||||||||||||||||||||    
T  20649942 ccgcattcaaagcaaacacctttcccgccgccttcttcggcctggtacacttagtactaatatgacccttctccccacaattgtagcaagtaat 20649849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 4 - 396
Target Start/End: Complemental strand, 21194439 - 21194047
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  21194439 aatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacat 21194340  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||| ||||||| ||| |||||  | |||||||| ||||||||||||||||||||| ||| |||| |||||||||||    
T  21194339 aaaagaagtagtcaccgaacctctagccggggtgtcgataaccatcccccgcaacaaaggagttacaaccaatttcaaacgcttaacacaactaaccgag 21194240  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||||||||||||||| |||||||| |||| |||||||| |||||||||||||||||||||||||  ||||||||||| ||||    
T  21194239 ataaaagaatgagtagcaccaatatcaataattccaatcaaatgagtgctattgatgaaacacatacctcggataagattatccggctgctccacctcct 21194140  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaa 396  Q
    | |||||||| |||||||||||||| ||||||||||||||||||||||||||  |||| ||||| || |||| |||||||||||| |||||||    
T  21194139 ccgcattcaatgcaaacacctttcccgccgccttcttcggcttggtacacttggtactgatatggcccttctctccacaattgtaacaagtaa 21194047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 4 - 394
Target Start/End: Original strand, 22437184 - 22437574
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||| |||||||||||||||||  ||||| ||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||    
T  22437184 aatccatacaaaaaatcacatccatatgattcaatggaagacacacaagatctaactcaaaatcaacattaccaaaattaacatgacacttagcacacac 22437283  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
     ||| |||||||||| ||||||||||  ||||||| |||||||||  |||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  22437284 taaagaagtagtcactgaaccactagtcggggtgtcgatgaccatccctcgcaacaacggagttacaaccaatttcaaacgctcaacacaactaaccgag 22437383  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||| || || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  22437384 ataaaagaatgagtaacatcagtatcaataatcgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacttcct 22437483  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagt 394  Q
    |  ||||||| |||||||||||| |  |||||||||||||||||||||||||| |||| |||||||| ||||  ||||||||||| |||||    
T  22437484 ccacattcaatgcaaacaccttttccaccgccttcttcggcttggtacacttagtactgatatgacccttctcaccacaattgtaacaagt 22437574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 4 - 397
Target Start/End: Complemental strand, 21848224 - 21847831
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    |||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| | ||| |||||||||||||||||||||||     
T  21848224 aatccataccaaaaataacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaacaaaattaacaggacacttagcacacat 21848125  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||  |||||||||||||||||||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| |||||    
T  21848124 aaacgaagtagtcaccgaaccactagccggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgag 21848025  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  21848024 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaagagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 21847925  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    | || |||||||||||||||||||| ||||||||||||||| ||||||||||  ||||||||||||| |||| |||||||||||| ||||||||    
T  21847924 ccgcgttcaaagcaaacacctttcccgccgccttcttcggcatggtacacttggtactaatatgacccttctctccacaattgtaacaagtaat 21847831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 4 - 373
Target Start/End: Original strand, 23903056 - 23903424
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  23903056 aatccatacaaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaacatttccaaaattaacaggacacttagcacacac 23903155  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
     ||  |||||||||||||||||||||| ||||||| |||||||||  ||||| | ||||||||||||||||| ||||||||||||||| ||||| |||||    
T  23903156 taaggaagtagtcaccgaaccactagccggggtgtcgatgaccatccctcgcgataacggagttacaaccaaattcaaatgctcaacacaactagccgag 23903255  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| |||||||||||  |||| |||||||||||||||||||||| |||||||  ||||||||||  ||||||||||| || |    
T  23903256 ataaaagaatgagtagcaccagtatcaataattataatc-aaggagtactattgataaaacatatacctcatataagattatccggctgctccacctctt 23903354  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccatt 373  Q
    |||||||||| |||||||||||| | ||| ||||||| |||||||||||||||  ||| |||||||||||    
T  23903355 ctgcattcaatgcaaacaccttttctgccaccttctttggcttggtacacttagcactgatatgaccatt 23903424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 4 - 397
Target Start/End: Original strand, 16414985 - 16415373
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||      |  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  16414985 aatccataccaaaaatcacatccatatgcttcaaa-----aatcacaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacat 16415079  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| ||||| | || |||||||||| | |||||| |||||||||||    
T  16415080 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccccgcaacaaaggagtcaaaatcaatttcaaacgttcaacacaactaaccgag 16415179  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||  || |||||||| ||||    
T  16415180 ataaaagaatgagtagcaccagtatcaataattgcaatcaatggaatactattgataaaacacatacctcggataaggttatccggttgctccacctcct 16415279  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    | |||||||| ||||||||||||||  || ||||||||||||||||||||||| ||||||||||||| |||| |||| ||||||||||||||||    
T  16415280 ccgcattcaaggcaaacacctttcccaccaccttcttcggcttggtacacttagtactaatatgacctttctctccataattgtagcaagtaat 16415373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 24931711 - 24931619
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcaca 100  Q
    ||||||||||||||||||||||||||| ||||||||||| |||    |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24931711 aatccataccaaaaatcacatccatatgcttcaacggaaaaca----agatccaactcaaaatcaacattaccaaaattaacaggacacttagcaca 24931619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 23154919 - 23154838
Alignment:
Q  15 aaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttag 96  Q
    |||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||  ||||||| |||||||||    
T  23154919 aaaatcacatccatatgcttcaacggaagatacacaagatcaaactcaaaatcaacattaccataattaacatgacacttag 23154838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 16268910 - 16268859
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  16268910 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 16268859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 256
Target Start/End: Original strand, 28984015 - 28984057
Alignment:
Q  214 gagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||||||||| |||||||||| ||||| ||||||||||||||    
T  28984015 gagtagcaccagtatcaataatagcaattaaaggagtactatt 28984057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 256
Target Start/End: Original strand, 28989234 - 28989276
Alignment:
Q  214 gagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||||||||| |||||||||| ||||| ||||||||||||||    
T  28989234 gagtagcaccagtatcaataatagcaattaaaggagtactatt 28989276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 256
Target Start/End: Complemental strand, 31414209 - 31414167
Alignment:
Q  214 gagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||    
T  31414209 gagtagcaccaatatctataatagcaattaaaggagtactatt 31414167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 270; Significance: 1e-151; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 4 - 397
Target Start/End: Complemental strand, 6150536 - 6150143
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  6150536 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacat 6150437  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| ||||||| |||||||| ||||| |||||||  || |||||  | |||||||| ||||||||||||||||||||| |||||||| ||||||||||     
T  6150436 aaaagaagtagtaaccgaacctctagccggggtgtcaataaccattccccgcaacaagggagttacaaccaatttcaaacgctcaacacaactaaccgat 6150337  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  || |||||||| ||||    
T  6150336 ataaaagaatgagtagcaccaatatcaataattgcaatcaaatgagtactattgataaaacacatacctcggataagattatccggttgctccacctcct 6150237  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    | |||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  6150236 ccgcattcaaagcaaacacctttcccaccgccttcttcggcttggtacacttagtactaatatgacccttctctccacaattgtagcaagtaat 6150143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 4 - 393
Target Start/End: Original strand, 17201092 - 17201482
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||    
T  17201092 aatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaacattacctaaattaacaggacaattagcacacac 17201191  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| |||||  |||||| |||||||||  |||||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  17201192 aaaagaagtagtcaccgaaccgctagcacgggtgtcgatgaccatccctcgcaacaaaggagttacaaccaatttcaaacgctcaacacaactaaccgag 17201291  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgat-aaaacacatacctcggataagattatttggctgctccacttcc 302  Q
     |||||||| ||||||||| | ||||||||||||||||||| |||||||||||||| ||||||||||| || ||||||||||| ||| ||||||| ||||    
T  17201292 ataaaagaatgagtagcactagtatcaataattgcaatcaatggagtactattgataaaaacacatacatcagataagattatctggatgctccatttcc 17201391  T
Q  303 tctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaag 393  Q
    || |||||||| |||||||||||||| ||||||||||||||||||||||||||| |||| |||||||| |||| |||||||||||| ||||    
T  17201392 tccgcattcaatgcaaacacctttcccgccgccttcttcggcttggtacacttagtactgatatgacccttctctccacaattgtaacaag 17201482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 4 - 397
Target Start/End: Complemental strand, 8272082 - 8271689
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||     
T  8272082 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacatttagcacacat 8271983  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| |||||    
T  8271982 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgag 8271883  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  8271882 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 8271783  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||||    
T  8271782 ccgcattcaaagcaaacacctttcccgccgccttcttcggcttggtacacttggtactaatatgacccttctctccacaattgtaacaagtaat 8271689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 4 - 395
Target Start/End: Original strand, 30149814 - 30150205
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  30149814 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacat 30149913  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| |||||    
T  30149914 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgag 30150013  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  30150014 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 30150113  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagta 395  Q
    | || |||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||    
T  30150114 cggcgttcaaagcaaacacctttcccgccgccttctttggcttggtacacttggtactaatatgacccttctctccacaattgtaacaagta 30150205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 4 - 397
Target Start/End: Complemental strand, 13965035 - 13964645
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  13965035 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacat 13964936  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    ||||   |||||||||||||| ||||| ||||| |  || |||||  | ||||||||  ||||||||||||| | ||||   |||||| ||||| |||||    
T  13964935 aaaa---gtagtcaccgaaccgctagccggggtatcaataaccattccacgcaacaaacgagttacaaccaaatccaaactttcaacacaactagccgag 13964839  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| | ||||    
T  13964838 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccgcctcct 13964739  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||||    
T  13964738 ccgcattcaaagcaaacacctttcccgccgccttcttcggcttggtacacttggtactaatatgacccttctctccacaattgtaacaagtaat 13964645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 21 - 397
Target Start/End: Complemental strand, 22150403 - 22150036
Alignment:
Q  21 acatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacacaaaacaagtagtcaccg 120  Q
    |||||||||| ||||||||||||||| |||||| |||||||||||| ||||| ||||| ||||||| ||||||||||||||| |||| ||||||||||||    
T  22150403 acatccatatgcttcaacggaagacaaacaagacccaactcaaaattaacataaccaaaattaacaagacacttagcacacataaaagaagtagtcaccg 22150304  T
Q  121 aaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagc 220  Q
    |||| ||||| ||||| |  || ||| |  | |||||||| ||||||||||||||||||||| |||||||| | |||||| || |||||||| || ||||    
T  22150303 aaccgctagccggggtatcaataaccgttccccgcaacaaaggagttacaaccaatttcaaacgctcaacacagctaaccaagataaaagaatgactagc 22150204  T
Q  221 accaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaac 320  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||| ||||| |||||||||||||||    
T  22150203 accagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcagataagattatctggttgctccacctcctcagcattcaaagcaaac 22150104  T
Q  321 acctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    || ||||| |||||||||||||||||||         ||||||| ||||| |||| |||||||||||||||||||||    
T  22150103 acttttcccgccgccttcttcggcttgg---------tactaatgtgacccttctctccacaattgtagcaagtaat 22150036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 154 - 397
Target Start/End: Complemental strand, 15944128 - 15943885
Alignment:
Q  154 gcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtact 253  Q
    ||||||| | |||||||||||| |||||| | |||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15944128 gcaacaaagaagttacaaccaaattcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccaatatcaataattgcaatcaaaggagtact 15944029  T
Q  254 attgataaaacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacac 353  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  15944028 attgataaaacacatacctcgtataagattatccggctgctccacctcctccgcatttaaagcaaacacctttcccgccgccttcttcggcttggtacac 15943929  T
Q  354 ttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    ||| ||||||||||||| |||| ||| |||||||| ||||||||    
T  15943928 ttagtactaatatgacccttctctccgcaattgtaacaagtaat 15943885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 4 - 144
Target Start/End: Complemental strand, 15948154 - 15948014
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  15948154 aatccataccaaaaatcacatccatatgcttaaacggaagacaaacaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacat 15948055  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatga 144  Q
    |||| |||||||||||||||| ||||| |||||||||||||    
T  15948054 aaaagaagtagtcaccgaaccgctagccggggtgttgatga 15948014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 15612559 - 15612658
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15612559 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacac 15612658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 30140263 - 30140359
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcaca 100  Q
    |||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||||| ||||    
T  30140263 aatccataccaaaaataacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacagaacacttaacaca 30140359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 12796024 - 12796092
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 72  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  12796024 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacat 12796092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 16258930 - 16258998
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 72  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16258930 aatccataccaaaaataacatccatattcttcaacggaagacacacaagatccaactcaaaatcaacat 16258998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 18915514 - 18915582
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 72  Q
    ||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||| |||||||    
T  18915514 aatccataccaaaaatcacatccatatgcttcaacggaagccaaacaagatccaactcaaagtcaacat 18915582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 10408626 - 10408677
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  10408626 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 10408677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 12509954 - 12509903
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  12509954 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 12509903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 28756977 - 28757028
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  28756977 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 28757028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 47126602 - 47126653
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  47126602 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 47126653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 256
Target Start/End: Complemental strand, 31692647 - 31692605
Alignment:
Q  214 gagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||    
T  31692647 gagtagcaccaatatctataatagcaattaaaggagtactatt 31692605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 264; Significance: 1e-147; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 6 - 405
Target Start/End: Complemental strand, 22739636 - 22739237
Alignment:
Q  6 tccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacacaa 105  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||    
T  22739636 tccatgccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaacattacaaaaattaacaggacacttagcacacataa 22739537  T
Q  106 aacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggt 205  Q
    || ||||||| |||||||| ||||| | ||||| ||| |||||  | |||||||| ||||||||||||||||||||| || ||||| ||||||||||| |    
T  22739536 aagaagtagttaccgaaccgctagccgaggtgtcgataaccatcccccgcaacaaaggagttacaaccaatttcaaacgcacaacacaactaaccgagat 22739437  T
Q  206 aaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcctct 305  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||  |||||||||||||||||     
T  22739436 aaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctctgataaatttatccggctgctccacttcctcc 22739337  T
Q  306 gcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaatattcttcg 405  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||| || |||||    
T  22739336 gcattcaaagcaaacacctttcctgccgccttcttcggcttggtacacttagtactaatatgacccttctctccacaattgtagcaagtaacatccttcg 22739237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 4 - 397
Target Start/End: Original strand, 22280564 - 22280957
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||     
T  22280564 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacattacctaaattaacaggacacttagcacacat 22280663  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| ||||||||||||||||||||| | |||||| |||||||||||    
T  22280664 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgttcaacacaactaaccgag 22280763  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||| ||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||   |||||||||| ||||    
T  22280764 ataaatgaatgactagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctctgataagattatcctgctgctccacctcct 22280863  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    | ||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||  |||| |||||||||||| ||||||||    
T  22280864 ccgcattcaaagcaaacacctttcccgccgccttcttcggctttgtacacttagtactaatatgacatttctctccacaattgtaacaagtaat 22280957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 4 - 260
Target Start/End: Original strand, 25131068 - 25131324
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||    
T  25131068 aatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaatattaccaaaattaacagggcacttagcacacac 25131167  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
     ||  |||||||||||||||||||||| ||||||| |||||||||  ||||| ||||||||||||||||||| |||| | | | |||| |||||||||||    
T  25131168 taaggaagtagtcaccgaaccactagccggggtgtcgatgaccatccctcgcgacaacggagttacaaccaaattcagacgttaaacacaactaaccgag 25131267  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgata 260  Q
     || ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||    
T  25131268 atagaagaatgagtagcaccagtatcaataattgcaatcaaatgagtactattgata 25131324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 4 - 231
Target Start/End: Complemental strand, 24567652 - 24567425
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||     
T  24567652 aatccataccaaaaatcacatccatatgcttccatggaagacacacaagatccaactcaaaatcaacagtaccaaaatcaacaggacacttagcacacat 24567553  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||| |||| |||||| ||||  |||||||  || | |||  |  ||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  24567552 aaaagaagttgtcatcgaaccgctagtcggggtgtcaataatcattccctgcaacaaaggagttacaaccaatttcaaacgctcaacacaactaaccgag 24567453  T
Q  204 gtaaaagaaagagtagcaccaatatcaa 231  Q
     |||||||| ||||||||| | ||||||    
T  24567452 ataaaagaatgagtagcactagtatcaa 24567425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 25878623 - 25878531
Alignment:
Q  8 cataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcaca 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  25878623 cataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaacattaccaaaattaacaggacacttaacaca 25878531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 12638886 - 12638818
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 72  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  12638886 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaaaatccaactcaaaatcaacat 12638818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 12644553 - 12644485
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 72  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  12644553 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaaaatccaactcaaaatcaacat 12644485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 24829172 - 24829105
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 72  Q
    ||||||||||||||||||||| ||||| ||||||||||||||| | |||||||||||||||||||||||    
T  24829172 aatccataccaaaaatcacattcatatgcttcaacggaagaca-aaaagatccaactcaaaatcaacat 24829105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 34821609 - 34821675
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaaca 71  Q
    |||||||||||||| || ||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  34821609 aatccataccaaaa-tcgcatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaaca 34821675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 256
Target Start/End: Original strand, 23113394 - 23113434
Alignment:
Q  216 gtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||||||| |||||||||| ||||| ||||||||||||||    
T  23113394 gtagcaccagtatcaataatagcaattaaaggagtactatt 23113434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 261; Significance: 1e-145; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 4 - 396
Target Start/End: Original strand, 16100707 - 16101099
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  16100707 aatccataccaaaaatcacatccatatgcttcaacggaagacacgcaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacat 16100806  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||  |||||||  || |||||  | |||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  16100807 aaaagaagtagtcaccgaaccgctagtcggggtgtcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgctcaacacaactaaccgag 16100906  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||  || |||||||| || |    
T  16100907 ataaaaaaatgagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacaaatacttcggataagattatccggttgctccacctctt 16101006  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaa 396  Q
    | ||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||    
T  16101007 ccgcattcaaagcaaacacctttcccgccgccttctttggcttggtacacttagtactaatatgacccttctctccacaattgtagcaagtaa 16101099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 4 - 395
Target Start/End: Complemental strand, 16379962 - 16379571
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  16379962 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacat 16379863  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| |||||    
T  16379862 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgag 16379763  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  16379762 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 16379663  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagta 395  Q
    | || |||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||    
T  16379662 cggcgttcaaagcaaacacctttcccgccgccttctttggcttggtacacttggtactaatatgacccttctctccacaattgtaacaagta 16379571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 4 - 397
Target Start/End: Complemental strand, 16647558 - 16647165
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  16647558 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacat 16647459  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||  |||||||  || |||||  | ||||||||  ||||||||||||| | |||| | | |||| ||||| |||||    
T  16647458 aaaagaagtagtcaccgaaccgctagtcggggtgtcaataaccattccacgcaacaaatgagttacaaccaaatccaaacgtttaacacaactagccgag 16647359  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  16647358 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 16647259  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||||    
T  16647258 ccgcattcaaagcaaacacctttcccgccgccttcttcggcttggtacacttggtactaatatgacccttctctccacaattgtaacaagtaat 16647165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 4 - 260
Target Start/End: Original strand, 18401337 - 18401593
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||     
T  18401337 aatccataccaaaaatcacatccatatgcttcaacggaagagacacaagatccaactcaaaatcaacattaccgaaattaacaggacacttagcacacat 18401436  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||| ||||| ||||   ||||||  || |||||  | |||||||| |||||| |||||||||||||| | |||||| |||||||||||    
T  18401437 aaaagaagtagtcactgaaccgctagtcagggtgtcaataaccattccccgcaacaaaggagttccaaccaatttcaaacgttcaacacaactaaccgag 18401536  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgata 260  Q
     |||||| |  |||| |||||||||||||||||||||||||||||||||||||||||    
T  18401537 ataaaagtatcagtaacaccaatatcaataattgcaatcaaaggagtactattgata 18401593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 221 - 397
Target Start/End: Original strand, 14149316 - 14149492
Alignment:
Q  221 accaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaac 320  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||   | || ||||||||||| |||||||| ||||||    
T  14149316 accagtatcaataattgcaatcaaaggagtactatcgataaaacacatacctcggataagattatccagttgttccacttcctccgcattcaatgcaaac 14149415  T
Q  321 acctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    ||||| || ||||||||||||||||||||||| ||| |||| |||||||| ||||  ||||||||||| ||||||||    
T  14149416 accttccctgccgccttcttcggcttggtacaattagtactgatatgacccttctcaccacaattgtaacaagtaat 14149492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 4 - 168
Target Start/End: Complemental strand, 1646403 - 1646239
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  1646403 aatccataccaaaaatcacatccatatgcttcaacggaagaaaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacat 1646304  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagtta 168  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||    
T  1646303 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccccgcaacaaaggagtta 1646239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 18578113 - 18578212
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  18578113 aatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaacattaccaaaattaacaagacacttagcacacac 18578212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 40 - 224
Target Start/End: Original strand, 14133824 - 14133993
Alignment:
Q  40 gaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacacaaaacaagtagtcaccgaaccactagctggggtgtt 139  Q
    |||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||| ||  |||||||               ||||||||     
T  14133824 gaagacacacaagatccagctcaaaatcaaccttaccaaaattaacaggacacttagcacacactaaggaagtagt---------------tggggtgtc 14133908  T
Q  140 gatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagcacca 224  Q
     ||||||||  |||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||| |||||||||||    
T  14133909 aatgaccatccctcgcaacaacggagttacaaccaatttcaaacgctcaacacaactaaccgagataaaagaatgagtagcacca 14133993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 23025350 - 23025251
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||  ||||||| ||||||| ||||||||||||||||    
T  23025350 aatccataccaaaaatcacatccatatgcttcaacggaagacgcacaagatccaactcaaaatcaatgttaccaaaattaacaagacacttagcacacac 23025251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 16235051 - 16235149
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    |||||| | |||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16235051 aatccaaaacaaaaatcacatccatatgcttcaatggaagacaaacaagatccaactcaaaatcaacattaccaa-attaacaggacacttagcacacac 16235149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 19985789 - 19985697
Alignment:
Q  8 cataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcaca 100  Q
    ||||| |||||||||||| |||| ||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  19985789 catacaaaaaatcacatctatatgcttcaacggaagacaaacaggatccaactcaaaatcaacattaccaaaattaacaggacacttaacaca 19985697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 18836246 - 18836178
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 72  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  18836246 aatccataccaaaaatcacatccatatgcttcaacggaagacagacaagatccaactcaaaatcaacat 18836178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 405
Target Start/End: Complemental strand, 21412811 - 21412714
Alignment:
Q  308 attcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaatattcttcg 405  Q
    |||||||||||||||  |||| ||||||||||||| |||| |||||||| ||||||||| ||| |||| |||||||||||| ||||||| || |||||    
T  21412811 attcaaagcaaacactgttcccgccgccttcttcgacttgatacacttagtactaatataacccttctctccacaattgtatcaagtaacatccttcg 21412714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 255
Target Start/End: Complemental strand, 18182744 - 18182705
Alignment:
Q  216 gtagcaccaatatcaataattgcaatcaaaggagtactat 255  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  18182744 gtagcaccaatatcaataatagcaattaaaggagtactat 18182705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 280
Target Start/End: Original strand, 21474502 - 21474568
Alignment:
Q  214 gagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataag 280  Q
    ||||||||||| |||| ||||| ||||| |||||||||||||| |  ||||| ||||||| ||||||    
T  21474502 gagtagcaccagtatctataatagcaattaaaggagtactattaaagaaacaaatacctctgataag 21474568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 260; Significance: 1e-145; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 2 - 397
Target Start/End: Original strand, 14999472 - 14999867
Alignment:
Q  2 caaatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacac 101  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  14999472 caaatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacac 14999571  T
Q  102 acaaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccg 201  Q
    | |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| |||    
T  14999572 ataaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccccgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccg 14999671  T
Q  202 aggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttc 301  Q
    || |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||    
T  14999672 agataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacgcatacctcggataagattatctggctgctccacctc 14999771  T
Q  302 ctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||||    
T  14999772 ctccgcattcaaagcaaacacctttcccgccgccttcttcggcttggtacacttggtactaatatgacccttctctccacaattgtaacaagtaat 14999867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 4 - 397
Target Start/End: Complemental strand, 15290602 - 15290209
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  15290602 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacat 15290503  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| |||||    
T  15290502 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgag 15290403  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  15290402 ataaaagaatgagtagcaccactatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacttcct 15290303  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    | || ||||||| |||||||||||  |||||||||||||| | |||||||||  ||||||||||||| |||| |||| ||||||||||||||||    
T  15290302 ccgcgttcaaagaaaacacctttctcgccgccttcttcggttgggtacacttggtactaatatgacccttctctccataattgtagcaagtaat 15290209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 6 - 404
Target Start/End: Complemental strand, 12340309 - 12339909
Alignment:
Q  6 tccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacacaa 105  Q
    ||||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||| ||||||||||||   |||||| |||||||||| ||||| |    
T  12340309 tccataccaaaaatcacgtccatgtgcttcaacggaagacacacaagatccaactcaaagtcaacattaccagagttaacatgacacttagcgcacacca 12340210  T
Q  106 aacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggt 205  Q
    |  ||||||||||||||||||| |  ||||||| ||||||| |  |||||||||||||||| |||||||| |||||| | |||||| ||||||||||| |    
T  12340209 aggaagtagtcaccgaaccactggtcggggtgtcgatgaccctccctcgcaacaacggagtcacaaccaaattcaaacgttcaacacaactaaccgagat 12340110  T
Q  206 aaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgat--aaaacacatacctcggataagattatttggctgctccacttcct 303  Q
    ||||||| |||||| ||||||||||||||| |||||||||||||||||||||||  |||| ||||||||||||| ||||||| | | || || || || |    
T  12340109 aaaagaatgagtaggaccaatatcaataatcgcaatcaaaggagtactattgataaaaaatacatacctcggatgagattatcttgttgttcgacctcat 12340010  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaatattctt 403  Q
    | ||||||||| |||||||||| || | |||||||||||| |||||||||||| |||| ||||||||   || ||| || ||||| |||||||||| |||    
T  12340009 ccgcattcaaatcaaacaccttacccgacgccttcttcggtttggtacacttagtactgatatgacctgactctccgcagttgtaacaagtaatatcctt 12339910  T
Q  404 c 404  Q
    |    
T  12339909 c 12339909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 9292994 - 9293093
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9292994 aatccataccaaaaatcacatccatatgcttcaacggaagacacacaaaatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacac 9293093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 15139113 - 15139015
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    |||||||||||||||| |||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15139113 aatccataccaaaaattacatccataagcttcaacggaagaca-acaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacac 15139015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 3262037 - 3261986
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  3262037 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 3261986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 7357296 - 7357347
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  7357296 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 7357347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 11204475 - 11204424
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  11204475 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 11204424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 29450780 - 29450729
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  29450780 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 29450729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 4 - 397
Target Start/End: Original strand, 26253 - 26646
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  26253 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacat 26352  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| |||||    
T  26353 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgag 26452  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  26453 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 26552  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| |||| || ||||||||||||||||||    
T  26553 ccgcattcaaagcaaacacctttcccgccgccttcttcggcttggtacacttggtactaatatgacccttctctcgacaattgtagcaagtaat 26646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 258; Significance: 1e-143; HSPs: 6)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 4 - 397
Target Start/End: Original strand, 90359 - 90752
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  90359 aatccataccaaaaatcacatccatacgcttcaacggaagacaaacaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacat 90458  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| | ||| |||||||  || |||||  | |||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  90459 aaaagaagtagtcaccgaaccgccagccggggtgtcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgctcaacacaactaaccgag 90558  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  || |||||||| ||||    
T  90559 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcagataagattatccggttgctccacctcct 90658  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    | |||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||| ||| |||| |||||||||||| ||||||||    
T  90659 ccgcattcaaagcatacacctttcccgccgccttcttcggcttggtacacttagtactaatataacctttctctccacaattgtatcaagtaat 90752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 4 - 397
Target Start/End: Original strand, 8014 - 8407
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||| ||| |||||||||||||||||||     
T  8014 aatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatacaacttaaaatcaacatcaccaaaattgacaggacacttagcacacat 8113  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | || ||||| || |||||||||| ||||||| |||||||| |||||||||||    
T  8114 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccccggaacaaaggggttacaaccattttcaaacgctcaacacaactaaccgag 8213  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |    
T  8214 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcagataagattattcggctgctccacttctt 8313  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    | ||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| |||| |||| ||||||||||||||||    
T  8314 ccgcattcaaagcaaacacctttcccgccgccttcttcggattggtacacttagtactaatatgacccttctctccagaattgtagcaagtaat 8407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 69 - 397
Target Start/End: Complemental strand, 21257 - 20930
Alignment:
Q  69 acattaccaatattaacaggacacttagcacacacaaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagtta 168  Q
    |||||||||| ||||| |||||||||||||||||| ||| |||||||||||||||||||||| ||||||| |||||||||  ||||||||||| ||||||    
T  21257 acattaccaaaattaataggacacttagcacacactaaagaagtagtcaccgaaccactagccggggtgtcgatgaccatccctcgcaacaacagagtta 21158  T
Q  169 caaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacat 268  Q
    |||| |  |||||| | |||||| ||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21157 caac-atgttcaaacggtcaacacaactaaccgagataaaagaatgagtagcaccactatcaataattgcaatcaaaggagtactattgataaaacacat 21059  T
Q  269 acctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatga 368  Q
    ||||| |||||||||||  ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||| ||||||||||||||| |||| |||||     
T  21058 acctcagataagattatccggctgctccacttcctccgcaatcaaagcaaacacctttcctgccgccttctttggcttggtacacttagtactgatatgt 20959  T
Q  369 ccattctttccacaattgtagcaagtaat 397  Q
    || ||||  | ||||||||| ||||||||    
T  20958 cctttctcacaacaattgtaacaagtaat 20930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 69 - 397
Target Start/End: Complemental strand, 30833 - 30506
Alignment:
Q  69 acattaccaatattaacaggacacttagcacacacaaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagtta 168  Q
    |||||||||| ||||| |||||||||||||||||| ||| |||||||||||||||||||||| ||||||| |||||||||  ||||||||||| ||||||    
T  30833 acattaccaaaattaataggacacttagcacacactaaagaagtagtcaccgaaccactagccggggtgtcgatgaccatccctcgcaacaacagagtta 30734  T
Q  169 caaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacat 268  Q
    |||| |  |||||| | |||||| ||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  30733 caac-atgttcaaacggtcaacacaactaaccgagataaaagaatgagtagcaccactatcaataattgcaatcaaaggagtactattgataaaacacat 30635  T
Q  269 acctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatga 368  Q
    ||||| |||||||||||  ||||||||||||||||| ||| ||||||||||||||||||| ||||||||||| ||||||||||||||| |||| |||||     
T  30634 acctcagataagattatccggctgctccacttcctccgcaatcaaagcaaacacctttcctgccgccttctttggcttggtacacttagtactgatatgt 30535  T
Q  369 ccattctttccacaattgtagcaagtaat 397  Q
    || ||||  | ||||||||| ||||||||    
T  30534 cctttctcacaacaattgtaacaagtaat 30506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 21301 - 21255
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacaca 50  Q
    |||| ||||||||||||||||| |||| |||||||||||||||||||    
T  21301 aatcgataccaaaaatcacatctatatgcttcaacggaagacacaca 21255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 30877 - 30831
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacaca 50  Q
    |||| ||||||||||||||||| |||| |||||||||||||||||||    
T  30877 aatcgataccaaaaatcacatctatatgcttcaacggaagacacaca 30831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 4 - 397
Target Start/End: Original strand, 23820 - 24213
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  23820 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacat 23919  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| |||||    
T  23920 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgag 24019  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  24020 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 24119  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    |||| |||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||||    
T  24120 ctgcgttcaaagcaaacacctttcccgccgccttctttggcttggtacacttggtactaatatgacccttctctccacaattgtaacaagtaat 24213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 254; Significance: 1e-141; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 4 - 397
Target Start/End: Complemental strand, 131936 - 131543
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||| ||||| |||||| ||||||||||     
T  131936 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaacttaaaattaacattaccaaaattaataggacatttagcacacat 131837  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| ||||||||||||||||||||| | |||||| |||||||||||    
T  131836 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgatcaacacaactaaccgag 131737  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     ||||| || ||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  131736 ataaaataatgagtagcacaagtatcaataattgcaatcaaaggagttctattgataaaacacatacctcggataagattatccggctgctccacctcct 131637  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  131636 ccgcattcaaagcaaacacctttcccgccgccttcttcggcttggtacacttagtactaatatgacccttctctccacaattgtagcaagtaat 131543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 4 - 397
Target Start/End: Original strand, 26634 - 27026
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||     
T  26634 aatctataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaatt-aacattaccaaaattaacaggacacttagcacacat 26732  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||| | |||||||| ||||| ||||||||   ||||   | |||| ||||||  |||    
T  26733 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccataccacgcaacaaaggagtaacaaccaaaaacaaacaataaacacaactaaaagag 26832  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     ||||||||  ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||    
T  26833 ataaaagaataagtagcaacagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggttgctccacttcct 26932  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    | ||||||||||||||||||||| | ||| ||||||||||||||||| ||||| ||||||||||||| |||| |||||||||||||||||||||    
T  26933 ccgcattcaaagcaaacaccttttccgcccccttcttcggcttggtaaacttagtactaatatgacctttctctccacaattgtagcaagtaat 27026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 254; Significance: 1e-141; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 4 - 397
Target Start/End: Original strand, 20527896 - 20528289
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    |||||||| |||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  20527896 aatccatatcaaaaatcacatccatatgctttaacggaagacaaacaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacat 20527995  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||  |||||||  || |||||  | |||||||| ||||||||||||||||||||| | |||||| |||||||||||    
T  20527996 aaaagaagtagtcaccgaacctctagtcggggtgtcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgttcaacacaactaaccgag 20528095  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||| ||||    
T  20528096 ataaaagaatgagtagcaccaggatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatgcggctgttccacctcct 20528195  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    | ||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||| |||| |||||||||||| ||||||||    
T  20528196 ccgcattcaaagcaaacacctttcccgctgccttcttcggcttggtacacttagtactaatatgacctttctctccacaattgtaacaagtaat 20528289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 4 - 393
Target Start/End: Original strand, 20927897 - 20928286
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    |||||||||||||||||||||| |||| ||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||| ||||||||||     
T  20927897 aatccataccaaaaatcacatctatatgcttcaacggaagacaaacaagatctaactcaaaatcaacattaccaaaattaacaggacatttagcacacat 20927996  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | || ||||| ||||||| ||||||||||||| | |||||| |||||||||||    
T  20927997 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccccgtaacaaaggagttataaccaatttcaaacgatcaacacaactaaccgag 20928096  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  ||||||||||| ||||    
T  20928097 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcaaataagattatccggctgctccacctcct 20928196  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaag 393  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||| ||||    
T  20928197 ctgcattcaaagcaaacacctttcctgccgccttcttcggcttggtacacttagtactaatatgacctttctctccacaattgtaacaag 20928286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 4 - 395
Target Start/End: Complemental strand, 20828908 - 20828517
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  20828908 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacat 20828809  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| |||||    
T  20828808 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgag 20828709  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  20828708 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 20828609  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagta 395  Q
    | || |||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||    
T  20828608 cggcgttcaaagcaaacacctttcccgccgccttctttggcttggtacacttggtactaatatgacccttctctccacaattgtaacaagta 20828517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 4 - 257
Target Start/End: Complemental strand, 22133268 - 22133015
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||    
T  22133268 aatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaacattaccaaaattaataggacacttagcgcacac 22133169  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||||||||||||||||||||| |||| ||||||| |||||||||  |||||||||||||||||| |||||||||||||||||||||| |||||||||||    
T  22133168 aaaacaagtagtcaccgaaccattagccggggtgtcgatgaccatccctcgcaacaacggagttagaaccaatttcaaatgctcaacacaactaaccgag 22133069  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattg 257  Q
    ||||||||| ||||||||||  ||||||||||||||||||||||| ||||||||    
T  22133068 gtaaaagaatgagtagcaccggtatcaataattgcaatcaaaggattactattg 22133015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 4 - 361
Target Start/End: Complemental strand, 41215372 - 41215019
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    |||| |||||||||||||||||||||| ||  ||||||||||| ||||||||||||||||||| ||  ||||||| ||||||| ||||||||||||||||    
T  41215372 aatcaataccaaaaatcacatccatatgctaaaacggaagacaaacaagatccaactcaaaattaatgttaccaaaattaacatgacacttagcacacac 41215273  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
     ||  |||||||||||||    ||||| ||||||| ||| |||||  ||||||||||||||||||||||||| |||||| |||||||| |||||||||||    
T  41215272 taaggaagtagtcaccga----ctagccggggtgtcgataaccatccctcgcaacaacggagttacaaccaaattcaaacgctcaacacaactaaccgag 41215177  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| ||||||||||||||||| ||||||||||  ||||||||||||||| ||||||||||||||  || |||||||||||||    
T  41215176 ataaaagaatgagtagcaccagtatcaataattgcaatccaaggagtactgctgataaaacacatacatcggataagattatccggttgctccacttcct 41215077  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattact 361  Q
    | |||||||| |||||||||||||| | ||||||||| |||||||||||| |||||||    
T  41215076 cggcattcaatgcaaacacctttcccgtcgccttctttggcttggtacacatattact 41215019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 251 - 404
Target Start/End: Complemental strand, 22129708 - 22129555
Alignment:
Q  251 actattgataaaacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggta 350  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22129708 actattgataaaacaaatacctcgggtaagattatctggctgctccacttcctctgcattcaaagcaaacacctttcctgccgccttcttcggcttggta 22129609  T
Q  351 cacttattactaatatgaccattctttccacaattgtagcaagtaatattcttc 404  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||||||| ||||    
T  22129608 cacttagtactaatatgacccttctctccacaattgtagcaagtaatatccttc 22129555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 10 - 298
Target Start/End: Original strand, 20172011 - 20172300
Alignment:
Q  10 taccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacacaaaaca 109  Q
    |||| |||||||||||||||| |  |||||| |  || ||||||||||||||||||||||||| ||||| ||||||||||||||||||||| || ||  |    
T  20172011 taccgaaaatcacatccatattcaccaacggcaagcaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacaaactaagga 20172110  T
Q  110 agtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaaa 209  Q
    ||| | |||||| |||   |  ||||| | ||||| |||  ||| ||||||| |||||| ||||||  ||||| | |||||| |||||| |||| | |||    
T  20172111 agttgccaccgagccatcggtcggggtatcgatgaacattcctctcaacaacagagttaaaaccaaactcaaacgttcaacacaactaagcgagatgaaa 20172210  T
Q  210 gaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgat-aaaacacatacctcggataagattatttggctgctccac 298  Q
    |||   ||||||| | |||||| |||| |||||||| ||||||||||||| ||||||||||||||  || |||||||  |||||||||||    
T  20172211 gaatacgtagcactagtatcaacaatttcaatcaaatgagtactattgataaaaacacatacctcaaatgagattatccggctgctccac 20172300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 20075024 - 20074973
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  20075024 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 20074973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 20297456 - 20297507
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  20297456 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 20297507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 31537312 - 31537261
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  31537312 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 31537261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 38910141 - 38910090
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  38910141 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 38910090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 48425948 - 48425999
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  48425948 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 48425999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 52988816 - 52988867
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  52988816 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 52988867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 252
Target Start/End: Original strand, 16379149 - 16379185
Alignment:
Q  216 gtagcaccaatatcaataattgcaatcaaaggagtac 252  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  16379149 gtagcaccaatatcaataatagcaattaaaggagtac 16379185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 248; Significance: 1e-137; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 4 - 394
Target Start/End: Complemental strand, 6452 - 6061
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaata-ttaacaggacacttagcacaca 102  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||    
T  6452 aatccataccaaaaatcacatccatatgcttcaacggaacacacacaagatccaactcaaaatcaacattaccaaaaattaacagggcacttagcacaca 6353  T
Q  103 caaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccga 202  Q
    | ||  |||||||||| ||||||||||| ||||||| |||||||||  ||||||| |||||||| |||||||| |||||| |||||||| ||||||||||    
T  6352 ctaaggaagtagtcactgaaccactagccggggtgtcgatgaccattcctcgcaataacggagtcacaaccaaattcaaacgctcaacacaactaaccga 6253  T
Q  203 ggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcc 302  Q
    | |||||||| ||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||  |||||||||||||||    
T  6252 gataaaagaatgagtagcaccagtatcaattattgcaatcaaagtagtactattgataaaacacatacctcagataagattatccggctgctccacttcc 6153  T
Q  303 tctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagt 394  Q
    || |||||||| |||||||||||||| ||||||||||| ||||||||||||||| |||| |||||||| ||||| ||||||||||| |||||    
T  6152 tccgcattcaatgcaaacacctttcccgccgccttctttggcttggtacacttagtactgatatgacccttcttaccacaattgtaacaagt 6061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 248; Significance: 1e-137; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 1 - 396
Target Start/End: Original strand, 4442741 - 4443136
Alignment:
Q  1 tcaaatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcaca 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  ||||||| |||| || ||||| |||||||    
T  4442741 tcaaatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatacaactcaaaatcaatgttaccaaaattagcatgacacctagcaca 4442840  T
Q  101 cacaaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaacc 200  Q
    ||| ||  ||||||| |||||||||||||| |||||||  ||||||||  ||||||||||||||||||||||||| |||||| |||||||| ||||||||    
T  4442841 cactaaggaagtagttaccgaaccactagccggggtgtcaatgaccatccctcgcaacaacggagttacaaccaaattcaaacgctcaacacaactaacc 4442940  T
Q  201 gaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccactt 300  Q
    |||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  4442941 gaggtagaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccactt 4443040  T
Q  301 cctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaa 396  Q
    ||||  ||| |||||||||||||||||| ||||||||||| |||||||||||||||  ||| |||||||| ||||  ||||||||||| |||||||    
T  4443041 cctccacatacaaagcaaacacctttcccgccgccttctttggcttggtacacttagaactgatatgacctttctcaccacaattgtaacaagtaa 4443136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 4 - 395
Target Start/End: Original strand, 7826717 - 7827108
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  7826717 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacat 7826816  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| |||||    
T  7826817 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgag 7826916  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  7826917 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 7827016  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagta 395  Q
    | || |||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||    
T  7827017 cggcgttcaaagcaaacacctttcccgccgccttctttggcttggtacacttggtactaatatgacccttctctccacaattgtaacaagta 7827108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 4 - 395
Target Start/End: Complemental strand, 27105227 - 27104836
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  27105227 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacat 27105128  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| |||||    
T  27105127 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgag 27105028  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  27105027 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 27104928  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagta 395  Q
    | || |||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||    
T  27104927 cggcgttcaaagcaaacacctttcccgccgccttctttggcttggtacacttggtactaatatgacccttctctccacaattgtaacaagta 27104836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 4 - 395
Target Start/End: Original strand, 27173098 - 27173489
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  27173098 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacat 27173197  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| ||||||||||||||   |||| | |||||| ||||| |||||    
T  27173198 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccccgcaacaaaggagttacaaccaaacccaaacgttcaacacaactagccgag 27173297  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  27173298 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 27173397  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagta 395  Q
    | || |||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||    
T  27173398 cggcgttcaaagcaaacacctttcccgccgccttctttggcttggtacacttggtactaatatgacccttctctccacaattgtaacaagta 27173489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 4 - 388
Target Start/End: Original strand, 13458852 - 13459234
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    |||||||||||||||||||||||||||  |||||||| | |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||      
T  13458852 aatccataccaaaaatcacatccatatggttcaacggcatacacacaaaatccaactcaaaatcaacattaccaaaattaacaggacacttagcacact- 13458950  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
     ||| ||||||||||| |||||||||| |||||||||||||||||  ||||||||||| |||||||||| || ||||||||||||||| ||||||||||     
T  13458951 -aaagaagtagtcacctaaccactagccggggtgttgatgaccatccctcgcaacaacagagttacaactaaattcaaatgctcaacacaactaaccgaa 13459049  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  | ||||||||||||||    
T  13459050 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggagaagattatccgtctgctccacttcct 13459149  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgta 388  Q
    | |||||||| |||||||| ||||| | | ||||||||  ||||||||||||| |||| |||||||| ||||  |||||||||||    
T  13459150 ccgcattcaatgcaaacacttttcccgtcaccttcttcaacttggtacacttagtactgatatgacccttctcgccacaattgta 13459234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 130 - 325
Target Start/End: Original strand, 14207264 - 14207456
Alignment:
Q  130 ctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagcaccaatatc 229  Q
    ||||||| | |||||||||  | ||| ||||||||||||||||||| |||||| | |||||| |||||||||||   |||  | ||||||| ||| |||     
T  14207264 ctggggtatcgatgaccattccacgcgacaacggagttacaaccaaattcaaacgttcaacacaactaaccgagaccaaa--atgagtagcgccagtatt 14207361  T
Q  230 aataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctt 325  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||||| |||||||||||||| ||| ||||||||||| ||||||||    
T  14207362 aataattgcaattaaaggagtactattgataaaacacatacctc-aataagattatatggctgctccacttactccgcattcaaagcgaacacctt 14207456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 130 - 325
Target Start/End: Original strand, 14215954 - 14216146
Alignment:
Q  130 ctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagcaccaatatc 229  Q
    ||||||| | |||||||||  | ||| ||||||||||||||||||| |||||| | |||||| |||||||||||   |||  | ||||||| ||| |||     
T  14215954 ctggggtatcgatgaccattccacgcgacaacggagttacaaccaaattcaaacgttcaacacaactaaccgagaccaaa--atgagtagcgccagtatt 14216051  T
Q  230 aataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctt 325  Q
    |||||||||||| |||||||||||||||||||||||||||||||  |||||||||| |||||||||||||| ||| ||||||||||| ||||||||    
T  14216052 aataattgcaattaaaggagtactattgataaaacacatacctc-aataagattatatggctgctccacttactccgcattcaaagcgaacacctt 14216146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 11284627 - 11284726
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11284627 aatccataccaaaaatcacatccatatgcttcaatggaagacacacaaaatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacac 11284726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 140 - 355
Target Start/End: Original strand, 22034950 - 22035165
Alignment:
Q  140 gatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagcaccaatatcaataattgca 239  Q
    |||||||||  ||| ||| || ||||||| |||||| |||||| | |||||| |||||| |||| | |||||| | ||||||| | |||||| | |||||    
T  22034950 gatgaccatccctctcaagaatggagttaaaaccaaattcaaaggttcaacacaactaagcgagatgaaagaatgcgtagcacaagtatcaacatttgca 22035049  T
Q  240 atcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctttccggccgccttct 339  Q
    |||||| |||||||||||||||||||||||||||  || | |||||  ||||||||||| |||||  ||||||| ||||| ||  ||||    |||||||    
T  22035050 atcaaatgagtactattgataaaacacatacctcatattaaattatccggctgctccacgtcctcaacattcaatgcaaaaactcttcccatggccttct 22035149  T
Q  340 tcggcttggtacactt 355  Q
    ||||||||||||||||    
T  22035150 tcggcttggtacactt 22035165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 355
Target Start/End: Complemental strand, 17142582 - 17142404
Alignment:
Q  177 ttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcgga 276  Q
    |||||| | |||||| |||||| |||| |||||||| ||  ||||||   ||||||||||||||||||  || ||||  ||||||||||||| ||||  |    
T  17142582 ttcaaacgttcaacacaactaagcgagataaaagaatgaaaagcacccgaatcaataattgcaatcaattgaatactgatgataaaacacatccctcaaa 17142483  T
Q  277 taagattatttggctgctccacttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacactt 355  Q
    | | |||||| | ||||| ||| || ||||||||||| ||||| ||||||||  ||||||||||||| |||||||||||    
T  17142482 ttaaattattcgtctgcttcacctcttctgcattcaatgcaaagacctttcctcccgccttcttcggtttggtacactt 17142404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 17926436 - 17926501
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaa 69  Q
    ||||||||||| | ||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  17926436 aatccataccagagatcacatccatatgcttcaacggaagacacacaggatccaactcaaaatcaa 17926501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 60 - 273
Target Start/End: Original strand, 17131545 - 17131758
Alignment:
Q  60 tcaaaatcaacattaccaatattaacaggacacttagcacacacaaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaaca 159  Q
    |||||||| ||||| |||| ||||||| |||||||| |||| || ||  ||||||||||||| | | | |  ||||| | |||||||||   || |||||    
T  17131545 tcaaaatccacatttccaaaattaacaagacacttaacacaaaccaaggaagtagtcaccgagctattggtcggggtatcgatgaccatccatctcaaca 17131644  T
Q  160 acggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgat 259  Q
     |||||| | ||| |  |||||| | ||  || |||||| |||  |||||||| | ||||||||  ||||||||||| ||||||| |||||||| ||| |    
T  17131645 tcggagtcataacaatattcaaacgttccgcacaactaagcgatataaaagaatgggtagcacccgtatcaataattacaatcaatggagtactgttgtt 17131744  T
Q  260 aaaacacatacctc 273  Q
    ||||||||||||||    
T  17131745 aaaacacatacctc 17131758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 21755431 - 21755482
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || |||||||||||||||||||||| ||||| ||||||||||||||    
T  21755431 taaaacaatgagtagcaccaatatcaataatagcaattaaaggagtactatt 21755482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 26115820 - 26115769
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || |||||||||||||||||||||| ||||| ||||||||||||||    
T  26115820 taaaacaatgagtagcaccaatatcaataatagcaattaaaggagtactatt 26115769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 13965898 - 13965847
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  13965898 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 13965847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 26092028 - 26091977
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  26092028 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 26091977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 40925047 - 40924996
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  40925047 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 40924996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 49155320 - 49155371
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  49155320 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 49155371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 404
Target Start/End: Original strand, 14218206 - 14218279
Alignment:
Q  331 ccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaatattcttc 404  Q
    |||||||||||||||||||||||||| |||| ||||| ||   || |||||| ||| | |||||||||| ||||    
T  14218206 ccgccttcttcggcttggtacacttagtactgatatggcctgcctctccacagttgaaacaagtaatatccttc 14218279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 4 - 397
Target Start/End: Complemental strand, 1399 - 1006
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||     
T  1399 aatccataccaaaaatcacatccatatgcttcaacagaagacaaacaagatccaactcaaaatcaacattaccaaaattaataggacacttagcacacat 1300  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||| | |||||   ||||| ||| |||||  | |||||||| |||||||| |||||||||||| | |||||| |||||| ||||    
T  1299 aaaagaagtagtcaccgaaacgctagccaaggtgtcgataaccattccccgcaacaaaggagttacgaccaatttcaaacgttcaacacaactaatcgag 1200  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  1199 ataaaagaatgagtagcaccagtatctataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccagctgctccacttcct 1100  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    | |||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||| ||||| |||| |||||||||||||||||||||    
T  1099 ccgcattcaaagcaaacacctttcccaccgccttcttcggcttggtacacttagtactaatgtgacccttctctccacaattgtagcaagtaat 1006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 243; Significance: 1e-134; HSPs: 2)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 4 - 394
Target Start/End: Complemental strand, 1068 - 678
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||  |||||||| |||||||||||||||||||||||     
T  1068 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcagtattaccaaaattaacaggacacttagcacacat 969  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||||||||| |||||||  || |||||  |  || |||| ||||||||||||||||||||| | |||| | |||||||||||    
T  968 aaaagaagtagtcaccgaaccactagccggggtgtcaataaccatcccctgcgacaaaggagttacaaccaatttcaaacgttcaatacaactaaccgag 869  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||| ||||    
T  868 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcagataagattatccggctgctccacctcct 769  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagt 394  Q
    | ||||||||||||||||||||||| |||||||||||||| |||||||||||  ||||||||||||| |||| ||||||||| || |||||    
T  768 ccgcattcaaagcaaacacctttcccgccgccttcttcggtttggtacacttggtactaatatgacctttctctccacaattataacaagt 678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467; HSP #2
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 162 - 394
Target Start/End: Complemental strand, 13620 - 13388
Alignment:
Q  162 ggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataa 261  Q
    ||||||||||||||||||||| | |||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13620 ggagttacaaccaatttcaaacgttcaacacaactaaccgagataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataa 13521  T
Q  262 aacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattact 361  Q
    |||||||||||| |||||||||||  ||||||||||| || || ||||||||||||||||||||||| |||||||||||||| |||||||||||  ||||    
T  13520 aacacatacctctgataagattatccggctgctccacctcttccgcattcaaagcaaacacctttcccgccgccttcttcggtttggtacacttggtact 13421  T
Q  362 aatatgaccattctttccacaattgtagcaagt 394  Q
    ||||||||| |||| ||||||||| || |||||    
T  13420 aatatgacctttctctccacaattataacaagt 13388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 4 - 397
Target Start/End: Original strand, 25035 - 25429
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||| ||     
T  25035 aatccataccaaaaatcacatccatatgctttaacggaagacacacaagatccaactcaaaatcaacattaccaaaattaataggacatttagcacccat 25134  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| ||||||||||||| || ||||| |||||||  || |||||  | |||||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  25135 aaaagaagtagtcaccgatccgctagccggggtgtcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgctcaacataactaaccgag 25234  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgat-aaaacacatacctcggataagattatttggctgctccacttcc 302  Q
     |||||||| ||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  || ||||||| ||||    
T  25235 ataaaagaatgagtagcaccagtatcaataattgcaattaaaggagtactattgataaaaacacatacctcggataagattatccggttgctccagttcc 25334  T
Q  303 tctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    || ||||||||||||||| ||||||  |||||||||| |||||| ||||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  25335 tccgcattcaaagcaaacgcctttcttgccgccttctccggctttgtacacttagtactaatatgacccttctctccacaattgtagcaagtaat 25429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 238; Significance: 1e-131; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 4 - 397
Target Start/End: Complemental strand, 74044 - 73651
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||| ||| |||||||||||||||||||||||     
T  74044 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatcgaactcaaaatcaacattaacaaaattaacaggacacttagcacacat 73945  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | ||||| |  ||||||||||||||||||||| | |||||| |||||||||||    
T  73944 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccccgcaatagaggagttacaaccaatttcaaacgttcaacacaactaaccgag 73845  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  || |||||||| ||||    
T  73844 ataaaacaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcatataagattatccggttgctccacctcct 73745  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    |  ||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||| |||| ||| |||||||||||||||||    
T  73744 cgacattcaaagcaaacacctttcccaccgccttcttcggcttggtacacttagtactaatatgacccttctctccgcaattgtagcaagtaat 73651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 4 - 397
Target Start/End: Complemental strand, 78425 - 78032
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||| ||| |||||||||||||||||||||||     
T  78425 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatcgaactcaaaatcaacattaacaaaattaacaggacacttagcacacat 78326  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | ||||| |  ||||||||||||||||||||| | |||||| |||||||||||    
T  78325 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccccgcaatagaggagttacaaccaatttcaaacgttcaacacaactaaccgag 78226  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  || |||||||| ||||    
T  78225 ataaaacaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcatataagattatccggttgctccacctcct 78126  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    |  ||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||| |||| ||| |||||||||||||||||    
T  78125 cgacattcaaagcaaacacctttcccaccgccttcttcggcttggtacacttagtactaatatgacccttctctccgcaattgtagcaagtaat 78032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 91 - 397
Target Start/End: Original strand, 181934 - 182240
Alignment:
Q  91 acttagcacacacaaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaac 190  Q
    |||||||| ||| |||  |||||||||||||||| ||||| |||||||  || |||||  | ||||| || ||||||||||| ||||||||| | |||||    
T  181934 acttagcagacataaatgaagtagtcaccgaaccgctagccggggtgtcaataaccattccccgcaaaaaaggagttacaacgaatttcaaacgttcaac 182033  T
Q  191 aaaactaaccgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggc 290  Q
    | ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  182034 acaactaaccgagataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggc 182133  T
Q  291 tgctccacttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagc 390  Q
    |||||||| ||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||    
T  182134 tgctccacctcctccgcattcaaagcaaacacctttcacgccgccttcttcggcttggtacacttagtactaatctgacccttctctccacaattgtagc 182233  T
Q  391 aagtaat 397  Q
    |||||||    
T  182234 aagtaat 182240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 6 - 263
Target Start/End: Complemental strand, 175958 - 175701
Alignment:
Q  6 tccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacacaa 105  Q
    ||||||||||||||||||||||| | ||| ||||||||| |||||||| ||||||||||||||||||||||||  ||||| |||||||||| ||||   |    
T  175958 tccataccaaaaatcacatccatgtgctttaacggaagaaacacaagaaccaactcaaaatcaacattaccaaagttaacgggacacttagaacacctca 175859  T
Q  106 aacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggt 205  Q
    |  ||||||||||||||||||| |  ||||| | |||||||||  ||| ||| |||||||| |||||||| |||||| | | |||| ||||||| ||| |    
T  175858 aggaagtagtcaccgaaccactggtcggggtatcgatgaccattcctcacaataacggagtcacaaccaaattcaaacgtttaacacaactaacggagat 175759  T
Q  206 aaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaa 263  Q
     |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  175758 gaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaa 175701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 4 - 394
Target Start/End: Original strand, 34942 - 35332
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||     
T  34942 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacattaccaaaattaacaggacatttagcacacat 35041  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| |||||||||||    
T  35042 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatacaaacgttcaacacaactaaccgag 35141  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||| || |    
T  35142 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgttccacctctt 35241  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagt 394  Q
    ||||||||||||||||||| || ||  |||||||||| ||||||||||| ||  ||||||||||||| |||| ||||||||| ||||||||    
T  35242 ctgcattcaaagcaaacactttccccaccgccttctttggcttggtacaattggtactaatatgacccttctctccacaattatagcaagt 35332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 4 - 397
Target Start/End: Original strand, 23508426 - 23508810
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||| ||||||     
T  23508426 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatctaactcaaaatcaacattaccaaaattaacaggacacttaacacacat 23508525  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| ||||||||||| |||| ||||| |||||||| || |||||  | |||||||| ||||||||| ||||||||||| | |||||| |||||||||||    
T  23508526 aaaagaagtagtcaccaaaccgctagccggggtgttaataaccattccccgcaacaaaggagttacagccaatttcaaacgttcaacacaactaaccgag 23508625  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||           
T  23508626 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccgactgctcc------- 23508718  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
      ||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||  |||| |||||||||||||||||||||    
T  23508719 --gcattcaaagcaaacacctttcccgctgccttcttcggcttggtacacttagtactaatatgactcttctctccacaattgtagcaagtaat 23508810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 4 - 397
Target Start/End: Original strand, 24583952 - 24584336
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| || ||||| |||||||||||||||||||||||     
T  24583952 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaatatcaccaaaattaacaggacacttagcacacat 24584051  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| |||||    
T  24584052 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccgag 24584151  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  24584152 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 24584251  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    | ||||||||||||||||||||||| || ||||||||||||||||         ||||||||||||| |||| |||||||||||| ||||||||    
T  24584252 ccgcattcaaagcaaacacctttcccgctgccttcttcggcttgg---------tactaatatgacccttctctccacaattgtaacaagtaat 24584336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 21934814 - 21934643
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||     
T  21934814 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaacaggacacttagcacacat 21934715  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaa 175  Q
    |||| |||||||||||||||| |||||  ||||||  || |||||  | |||||||| ||||||||||||||    
T  21934714 aaaagaagtagtcaccgaaccgctagccagggtgtcaataaccattccacgcaacaaaggagttacaaccaa 21934643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 23505316 - 23505383
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 72  Q
    ||||||||| ||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||    
T  23505316 aatccatac-aaaaatcacatccatatgcttcaacagaagacaaacaagatccaactcaaaatcaacat 23505383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 14884416 - 14884365
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  14884416 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 14884365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 20345225 - 20345276
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  20345225 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 20345276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 22505622 - 22505673
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  22505622 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 22505673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 25851015 - 25851091
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataaga 281  Q
    ||||| || ||||||||||| |||||||||| ||||| ||| |||||||||| |  |||||  |||||| |||||||    
T  25851015 taaaacaatgagtagcaccagtatcaataatagcaattaaatgagtactattaaagaaacaagtacctctgataaga 25851091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 4 - 397
Target Start/End: Complemental strand, 5253 - 4859
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||| ||||| |||||||| ||||||||||||||     
T  5253 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaacacaaaatcaacatcaccaaaattaacagaacacttagcacacat 5154  T
Q  104 aaaacaagtagtcaccgaaccactagctgggg-tgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccga 202  Q
    |||| |||||||||||||||| ||||| |||| |||  || |||||  | |||||||| |||||||||||||| | |||| | |||||| ||||| ||||    
T  5153 aaaagaagtagtcaccgaaccgctagccgggggtgtcaataaccattccacgcaacaaaggagttacaaccaaatccaaacgttcaacacaactagccga 5054  T
Q  203 ggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcc 302  Q
    | |||||||| ||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||| |||    
T  5053 gataaaagaatgagtagcaccagtatcgataattgcaatcaaaggagtattattgataaaacacatacctcggataagattatccggctgctccacctcc 4954  T
Q  303 tctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||| |||| |||||||||||| ||||||||    
T  4953 tctgcgttcaaagcaaacacctttcccgccgccttctttggcttggtacacttggtactaatatgacccttctctccacaattgtaacaagtaat 4859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 4 - 397
Target Start/End: Complemental strand, 13072 - 12679
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    |||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||     
T  13072 aatccataccaaaattcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacat 12973  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| ||||||||||  |||| ||||| |||||||  || |||||  | |||||||| ||||||||||||||||||||| | |||||| |||||||||||    
T  12972 aaaagaagtagtcactaaaccgctagccggggtgtcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgttcaacacaactaaccgag 12873  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||| |  |||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  12872 ataaaagtattagtatctccattatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 12773  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    | ||||||||||||| ||||||||| ||||||||||| ||||||||||||||  ||||||||||| | |||| |||| ||||||| ||||||||    
T  12772 ccgcattcaaagcaatcacctttcccgccgccttctttggcttggtacacttggtactaatatgaactttctctccagaattgtaacaagtaat 12679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 4 - 397
Target Start/End: Original strand, 1068 - 1461
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||     
T  1068 aatccataccaaaaatcacatccatatgcttcaacggaagagaaacaagatccaactcaaaatcaacatcaccaaaattaacaagacacttagcacacat 1167  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||| |||||||  || |||||  | |||||||| ||||||||||||||   |||| | |||||| |||||||||||    
T  1168 aaaagaagtagtcaccgaaccgctagccggggtgtcaataaccattccccgcaacaaaggagttacaaccaaaaacaaacgttcaacacaactaaccgag 1267  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||   |||||||||  ||||    
T  1268 ataaaagaatgagtagcaccagtatcaataattgaaatcaaaagagtactattgataaaacacatacctcggataagattatccagctgctccagctcct 1367  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    | ||||||||||||||||||||| | || |||||||||||||||||||||||| ||||||||||||| |||| |||||||||||| ||||||||    
T  1368 ccgcattcaaagcaaacacctttgccgctgccttcttcggcttggtacacttagtactaatatgacctttctctccacaattgtaacaagtaat 1461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 4 - 397
Target Start/End: Complemental strand, 7308 - 6914
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||| ||||| ||||||||||     
T  7308 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaaaattaactggacatttagcacacat 7209  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||  |||||||||| ||||| ||||| |||||||  || |||||  | |||||||| ||||||||||||||||||||| | |||||  |||||||||||    
T  7208 aaag-aagtagtcactgaaccgctagccggggtgtcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgatcaacgcaactaaccgag 7110  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     ||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  7109 ataaaagaataagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatccggctgctccacctcct 7010  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattacta--atatgaccattctttccacaattgtagcaagtaat 397  Q
    || ||||||||| |||||||||||| ||||||||||||||||||||||||||  |||||  |||||||| |||| ||||||||| |||||||||||    
T  7009 ctacattcaaagtaaacacctttcccgccgccttcttcggcttggtacacttggtactaatatatgacccttctctccacaattatagcaagtaat 6914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 4 - 375
Target Start/End: Complemental strand, 5751 - 5380
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||| ||||||| |||||||| || ||||||||||||||||||| |||||||||||||||||||||||     
T  5751 aatccataccaaaaatcacatccatatgcttcaacagaagacaaacaagatcaaattcaaaatcaacattaccaaaattaacaggacacttagcacacat 5652  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||  ||||| |||||||  || |||||  | |||||||| ||||||| ||||||||||||| |||||||| |||||||| ||    
T  5651 aaaagaagtagtcaccgaactgctagcaggggtgtcaataaccattccccgcaacaaaggagttataaccaatttcaaacgctcaacataactaaccaag 5552  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||  || |||||| | ||||    
T  5551 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtactattgataaaacacataccacgaataagattatccggttgctccgcctcct 5452  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattct 375  Q
    | ||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||| ||||| ||||    
T  5451 ccgcattcaaagcaaacacttttcccgccgccttcttcggcttggtacacttagtactaatttgacctttct 5380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0962 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 4 - 361
Target Start/End: Original strand, 2431 - 2785
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    |||||||||||||||||||| |||||| ||| |||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||    
T  2431 aatccataccaaaaatcacacccatatgctttaacg-aagacacacaagatccaactcaaaatcaaaattaccaaaattaataggacacttagcacacac 2529  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
     ||  ||||||||||||||| |||||  ||||||| |||||||||  ||||||| ||||||||||||||||| |||||| ||  |||| |||||||||||    
T  2530 taaggaagtagtcaccgaacaactagtcggggtgtcgatgaccatccctcgcaaaaacggagttacaaccaaattcaaacgc--aacacaactaaccgag 2627  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  | ||||||||||||||    
T  2628 ataaaagaatgagtagcaccagtatcaataattgcaatcaaaggagtattattgataaaacacatacctcggataagattatccgactgctccacttcct 2727  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattact 361  Q
    |||||||||| |||||||| ||||| |||||||||||| |||||||||||||||||||    
T  2728 ctgcattcaatgcaaacacttttcccgccgccttcttcagcttggtacacttattact 2785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 4 - 396
Target Start/End: Complemental strand, 4349 - 3958
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| || ||||||||||     
T  4349 aatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaagtcaacattaccaaaattaacagggcatttagcacacat 4250  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||| ||||| |  || |||||  | |||||||| ||||||||||||||||||||| |||||||| || ||| ||||    
T  4249 aaaagaagtagtcaccgaaccgctagccggggtatcaataaccattccccgcaacaaaggagttacaaccaatttcaaacgctcaacacaattaatcgag 4150  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     |||||||| ||||||||||| |||| |||||||||||||| |||||||||||||| ||||||||| ||| ||||||||||| | ||| |||||| ||||    
T  4149 ataaaagaatgagtagcaccagtatcgataattgcaatcaacggagtactattgat-aaacacatagctcagataagattatctagctactccacctcct 4051  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaa 396  Q
    | || ||||||| | |||| ||||| ||||||||||||||||||||||||||| |||| |||||||| ||||  ||||||||||| |||||||    
T  4050 ccgcgttcaaagaagacacttttcccgccgccttcttcggcttggtacacttagtactgatatgacccttctcaccacaattgtaacaagtaa 3958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 195; Significance: 1e-106; HSPs: 2)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 4 - 394
Target Start/End: Original strand, 15767 - 16157
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    |||||||||||||| |||||||||||| |||||||||||| || ||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||     
T  15767 aatccataccaaaactcacatccatatgcttcaacggaaggcaaacaagatccaactcaaaatcagcattaccaaaattaacaggacatttagcacacat 15866  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
    |||| |||||||||||||||| ||||   ||||||  || |||||  |   |||||| |||||||||||||| | |||| | |||||| |||||||||||    
T  15867 aaaagaagtagtcaccgaaccgctagacagggtgtcaataaccattccaaacaacaaaggagttacaaccaaatacaaacgttcaacacaactaaccgag 15966  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     ||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||| ||||    
T  15967 ataaaagaataagtaacaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatgcggttgctccacctcct 16066  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagt 394  Q
    ||| ||||||||||||||| ||||| |   |||| |||||||||||||||||  |||||||||| || |||| ||||||||| || |||||    
T  16067 ctgaattcaaagcaaacacttttcccgttaccttattcggcttggtacacttggtactaatatggcccttctctccacaattataacaagt 16157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 10621 - 10553
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 72  Q
    |||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  10621 aatccataccaaaaattacatccatattcttcaacggaagacatacaagatccaactcaaaatcaacat 10553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 170; Significance: 4e-91; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 140 - 396
Target Start/End: Complemental strand, 26012 - 25755
Alignment:
Q  140 gatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaa-gagtagcaccaatatcaataattgc 238  Q
    |||||||||  | ||||||||||||||||||| |||||||||| |||||||  ||||||||||| ||||| ||| ||||||||| |||||||||||||||    
T  26012 gatgaccatcccacgcaacaacggagttacaatcaatttcaaacgctcaacgcaactaaccgagataaaaaaaatgagtagcactaatatcaataattgc 25913  T
Q  239 aatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctttccggccgccttc 338  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||| |||||||||||||||||||| |||||||||    
T  25912 aatcaaatgagtactattgataaaacacatacctcggataagattatccggctgctccacttcttctgctttcaaagcaaacacctttcccgccgccttc 25813  T
Q  339 ttcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagtaa 396  Q
    |||||||||||||||||| ||||||||||||| |||| |||||||||||| |||||||    
T  25812 ttcggcttggtacacttagtactaatatgacctttctctccacaattgtaacaagtaa 25755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 167; Significance: 3e-89; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 4 - 370
Target Start/End: Original strand, 3356 - 3722
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||| ||||||||| |||||| |  |||| |||||||||||||| |    
T  3356 aatccataccaaaaatcacatccatgtgcttcaacgaaagacacacaagatccaactctaaatcaacactaccaaaacgaacaagacacttagcacaccc 3455  T
Q  104 aaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgag 203  Q
     ||  |||||||||| || ||||| |  ||||||| |||||||||  ||||||||||| ||||| ||| ||| |||||| | | |||| |||||||||||    
T  3456 taacgaagtagtcactgagccactggtcggggtgtcgatgaccatccctcgcaacaacagagttccaaacaaattcaaacgttgaacacaactaaccgag 3555  T
Q  204 gtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcct 303  Q
     | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||| ||||||||||| ||| ||||||||||| |    
T  3556 atgaaagaatgagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacatgttcctcagataagattatctggttgctccacttcat 3655  T
Q  304 ctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgacc 370  Q
    | ||||||   |||||||| ||| |  |||||||||||||||||||||||||| |||| | ||||||    
T  3656 ccgcattcggtgcaaacactttttcctccgccttcttcggcttggtacacttagtactgaaatgacc 3722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 132; Significance: 2e-68; HSPs: 2)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 153 - 397
Target Start/End: Original strand, 2703 - 2953
Alignment:
Q  153 cgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggag--- 249  Q
    |||||||| ||||||||| ||||||||||| |||||||| ||||||||||| |||||||| ||||||||||  ||||||||||||||||||||||         
T  2703 cgcaacaaaggagttacagccaatttcaaaagctcaacacaactaaccgagataaaagaatgagtagcaccggtatcaataattgcaatcaaaggtacta 2802  T
Q  250 ---tactattgataaaacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctttccggccgccttcttcggctt 346  Q
       |||||||   | |||||| |||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||  |||||||||||||||||    
T  2803 tgctactattcgcacaacacagacctcggataagattatccggttgctccacttcctccgcattcaaagcaaacacctttctcgccgccttcttcggctt 2902  T
Q  347 ggtacacttattactaatatgaccattctttccacaattgtagcaagtaat 397  Q
    |||||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  2903 ggtacacttagtactaatatgacccttctctccacaattgtagcaagtaat 2953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 4 - 117
Target Start/End: Original strand, 2579 - 2692
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||| ||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||     
T  2579 aatccataccaaaaatcacatccatatgctttaacggaaaacacacaagatctaactcaaaatcaacattaccaaaattaacaggacacttagcgcacat 2678  T
Q  104 aaaacaagtagtca 117  Q
    |||| |||||||||    
T  2679 aaaagaagtagtca 2692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 9 - 370
Target Start/End: Complemental strand, 21168 - 20807
Alignment:
Q  9 ataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacacaaaac 108  Q
    ||||| |||||||||||||||| ||||||| ||||||| ||||||| |||||||||||| ||  |||||| | |||| ||||||||||||||   |||      
T  21168 ataccgaaaatcacatccatatgcttcaacagaagacaaacaagatacaactcaaaatcgacgctaccaaaactaacgggacacttagcacaactaaagg 21069  T
Q  109 aagtagtcaccgaaccactagctggggtgttgatgaccatatctcgcaacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaa 208  Q
    ||||||||||||| ||| | |  ||||| | ||||||| || |||   | ||||||||||| ||||| |||||| | |||||| |||||  ||||   ||    
T  21068 aagtagtcaccgacccattggtcggggtatcgatgaccttacctcctgataacggagttactaccaaattcaaacgatcaacacaactagtcgagaagaa 20969  T
Q  209 agaaagagtagcaccaatatcaataattgcaatcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcctctgca 308  Q
    |||| |||||| || | |||||| |||| |||||||||||| ||||||||| |||||||||||||||||||||||||   ||  |||||||||||||||     
T  20968 agaatgagtagaactagtatcaacaattacaatcaaaggagcactattgatgaaacacatacctcggataagattatccagcaactccacttcctctgcg 20869  T
Q  309 ttcaaagcaaacacctttccggccgccttcttcggcttggtacacttattactaatatgacc 370  Q
    ||||| || || ||  | |  |||||||| ||||||||||| |||||  |||| ||||||||    
T  20868 ttcaatgcgaaaactctccacgccgcctttttcggcttggttcacttggtactgatatgacc 20807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 56 - 370
Target Start/End: Original strand, 77339 - 77653
Alignment:
Q  56 caactcaaaatcaacattaccaatattaacaggacacttagcacacacaaaacaagtagtcaccgaaccactagctggggtgttgatgaccatatctcgc 155  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||| || ||  ||||||||| | | ||| | ||| |||||| |||||||||  ||       
T  77339 caactcaaaatcaacgttaccaaaattaacaggaaacttagcacaaactaaggaagtagtcatcaagccattggctagggtgtcgatgaccatcccttta 77438  T
Q  156 aacaacggagttacaaccaatttcaaatgctcaacaaaactaaccgaggtaaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactat 255  Q
    || ||| |||||| |||||| |||||| | |||||| |||||| |||| | |||||| | ||||||||| |||||| |||| ||| ||||||||||||||    
T  77439 aaaaacagagttaaaaccaaattcaaacgttcaacataactaagcgagatgaaagaatgcgtagcaccagtatcaacaattccaaacaaaggagtactat 77538  T
Q  256 tgataaaacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacactt 355  Q
    |||||||| ||||| ||||||| ||||||| ||| |||||||| ||||| || ||||| ||||| ||  | |  ||||| |||||| |||||||||||||    
T  77539 tgataaaatacatatctcggattagattatctggttgctccacctcctcagcgttcaatgcaaaaactctccacgccgctttcttcagcttggtacactt 77638  T
Q  356 attactaatatgacc 370  Q
      |||| ||||||||    
T  77639 ggtactgatatgacc 77653  T

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Target: scaffold0269 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 2335 - 2434
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  2335 aatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaacattaccaaaattaacaagacacttagcacacac 2434  T

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Target: scaffold0244 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 25012 - 24913
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25012 aatccataccaaaaatcacatccatatgcttcaacgggagacacacaagatccaactcaaaatcaacattaccaaaattaacaggacacttagcacacac 24913  T

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Target: scaffold0615 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 240 - 394
Target Start/End: Complemental strand, 9583 - 9429
Alignment:
Q  240 atcaaaggagtactattgataaaacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctttccggccgccttct 339  Q
    |||||| |||||||||||||||||||||||||||||||||||||||  ||||| ||||| || | | ||||||||||||||||||| || ||||||||||    
T  9583 atcaaatgagtactattgataaaacacatacctcggataagattatccggctgttccacctctttttcattcaaagcaaacaccttccccgccgccttct 9484  T
Q  340 tcggcttggtacacttattactaatatgaccattctttccacaattgtagcaagt 394  Q
    ||||||||||||| ||  ||||||||||| | ||||  |||||||||||||||||    
T  9483 tcggcttggtacaattggtactaatatgatccttctccccacaattgtagcaagt 9429  T

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Target: scaffold0009 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 258 - 396
Target Start/End: Original strand, 96637 - 96775
Alignment:
Q  258 ataaaacacatacctcggataagattatttggctgctccacttcctctgcattcaaagcaaacacctttccggccgccttcttcggcttggtacacttat 357  Q
    ||||||||||||||||||||||||| ||  ||||||||||||||||| | |||||||| |||||  ||||| |||||||||||||||||||||||||||     
T  96637 ataaaacacatacctcggataagataatccggctgctccacttcctccgtattcaaagaaaacatttttcccgccgccttcttcggcttggtacacttag 96736  T
Q  358 tactaatatgaccattctttccacaattgtagcaagtaa 396  Q
    |||| |||||||| |||| ||||||||||||||||||||    
T  96737 tactgatatgacccttctctccacaattgtagcaagtaa 96775  T

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Target: scaffold1164 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 2384 - 2292
Alignment:
Q  46 acacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacacaaaacaagtagtcaccgaaccactagctggggtgt 138  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  2384 acacaagatccaactcaaaatcaacattaccaaaattaacaagacacttagcacacacaaaagaagtagtcaccgaaccactagccggggtgt 2292  T

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Target: scaffold0342 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 4 - 100
Target Start/End: Original strand, 3340 - 3436
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcaca 100  Q
    ||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  3340 aatccataccaaaaatcacattcatatgcttcaatggaagacacacaagatccaactcaaaatcaacattaccaaaattaacaggacacttaccaca 3436  T

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Target: scaffold0028 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 4 - 100
Target Start/End: Complemental strand, 93887 - 93791
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcaca 100  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||| | |||||||||||||||| ||||    
T  93887 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaactccaaatcaacattaccgaaattaacaggacacttaacaca 93791  T

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Target: scaffold1486 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold1486
Description:

Target: scaffold1486; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 364 - 455
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacactta 95  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  364 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaacttaaaatcaacattatcaaaattaacaggacactta 455  T

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Target: scaffold0139 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 17794 - 17696
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||| ||||||||||||||| | ||||||||||||||||||||||||    
T  17794 aatccataccaaaaatcacatccatatgcttcaatggaagacacacaagattcaact-aaaatcaacattaccgaaattaacaggacacttagcacacac 17696  T

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Target: scaffold0023 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 54058 - 53967
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacactta 95  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  54058 aatccataccaaaaatcacatccatatgcttcaacggaagacaaacaagatccaacttaaaatcaacattatcaaaattaacaggacactta 53967  T

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Target: scaffold0102 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 4 - 103
Target Start/End: Complemental strand, 46529 - 46431
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaatattaacaggacacttagcacacac 103  Q
    |||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| | ||| ||||||||||||||| ||||    
T  46529 aatccataccaaaa-tcacatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacattaccgaaatttacaggacacttagcaaacac 46431  T

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Target: scaffold0092 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 929 - 997
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 72  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  929 aatccataccaaaaatcacatccatatgcttcaacggaagacacacaagatccaactcaaaatcaacat 997  T

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Target: scaffold0022 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 8273 - 8199
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacattaccaa 78  Q
    |||||||||||||||| | |||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  8273 aatccataccaaaaataaaatccatatgcttcaacggaagacaaacaagatccaactcaaaatcaacatcaccaa 8199  T

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Target: scaffold0409 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 3399 - 3331
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 72  Q
    |||||||||||||||||||||| |||| ||||||| ||||||||| |||||||||||||||||||||||    
T  3399 aatccataccaaaaatcacatctatatgcttcaaccgaagacacaaaagatccaactcaaaatcaacat 3331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 11654 - 11586
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 72  Q
    |||||||||||||||||||||| |||| ||||||| ||||||||| |||||||||||||||||||||||    
T  11654 aatccataccaaaaatcacatctatatgcttcaaccgaagacacaaaagatccaactcaaaatcaacat 11586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 10826 - 10757
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaact-caaaatcaacat 72  Q
    ||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||| ||||||||||||    
T  10826 aatccataccaaaaatcacatccatatgctttaacggaagacaaacaagatccaactccaaaatcaacat 10757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1424 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold1424
Description:

Target: scaffold1424; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 131 - 198
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 72  Q
    |||||||||||||||| |||||||||| ||||||||||||||| |||| ||||||||||||||||||||    
T  131 aatccataccaaaaataacatccatatgcttcaacggaagacaaacaa-atccaactcaaaatcaacat 198  T

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Target: scaffold0066 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 51698 - 51766
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagatccaactcaaaatcaacat 72  Q
    ||||||| ||||||||||||||||||| ||||||||||||| | ||||||||||| |||||||||||||    
T  51698 aatccatgccaaaaatcacatccatatgcttcaacggaagataaacaagatccaattcaaaatcaacat 51766  T

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Target: scaffold1488 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1488
Description:

Target: scaffold1488; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 252 - 202
Alignment:
Q  4 aatccataccaaaaatcacatccatatacttcaacggaagacacacaagat 54  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  252 aatccataccaaaaatcacatccatatgcttcaacggaagacacacaagat 202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 255
Target Start/End: Original strand, 15479 - 15518
Alignment:
Q  216 gtagcaccaatatcaataattgcaatcaaaggagtactat 255  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  15479 gtagcaccaatatcaataatagcaattaaaggagtactat 15518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 29992 - 30043
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  29992 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 30043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 67354 - 67303
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  67354 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 67303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 41793 - 41844
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  41793 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 41844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 39579 - 39528
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  39579 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 39528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 256
Target Start/End: Complemental strand, 514599 - 514548
Alignment:
Q  205 taaaagaaagagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||| || ||||||||||| |||||||||| ||||| ||||||||||||||    
T  514599 taaaacaatgagtagcaccagtatcaataatagcaattaaaggagtactatt 514548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 256
Target Start/End: Complemental strand, 4326 - 4284
Alignment:
Q  214 gagtagcaccaatatcaataattgcaatcaaaggagtactatt 256  Q
    ||||||||||| |||||||||| ||||| ||||||||||||||    
T  4326 gagtagcaccagtatcaataatagcaattaaaggagtactatt 4284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 271
Target Start/End: Complemental strand, 29974 - 29941
Alignment:
Q  238 caatcaaaggagtactattgataaaacacatacc 271  Q
    |||||||| |||||||||||||||||||||||||    
T  29974 caatcaaaagagtactattgataaaacacatacc 29941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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