View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8810A_low_359 (Length: 226)

Name: NF8810A_low_359
Description: NF8810A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8810A_low_359
NF8810A_low_359
[»] chr5 (24 HSPs)
chr5 (58-213)||(27868578-27868739)
chr5 (58-213)||(33472564-33472728)
chr5 (119-213)||(18419339-18419433)
chr5 (51-154)||(10817758-10817871)
chr5 (136-186)||(21553475-21553525)
chr5 (58-154)||(23539711-23539817)
chr5 (138-186)||(43242596-43242644)
chr5 (136-186)||(21980153-21980203)
chr5 (136-186)||(36460960-36461009)
chr5 (51-98)||(22777063-22777110)
chr5 (138-186)||(22757903-22757952)
chr5 (55-98)||(8952038-8952081)
chr5 (51-102)||(18407937-18407988)
chr5 (51-102)||(19512397-19512448)
chr5 (55-102)||(23111197-23111244)
chr5 (51-102)||(28370048-28370099)
chr5 (159-213)||(41875703-41875757)
chr5 (172-213)||(22412974-22413015)
chr5 (138-186)||(1856567-1856614)
chr5 (138-186)||(6766673-6766720)
chr5 (58-98)||(21663143-21663183)
chr5 (138-186)||(21674537-21674584)
chr5 (58-98)||(22356904-22356944)
chr5 (58-102)||(22438748-22438792)
[»] chr3 (42 HSPs)
chr3 (58-216)||(10833309-10833473)
chr3 (58-213)||(42415-42579)
chr3 (58-213)||(16324541-16324705)
chr3 (58-213)||(13437126-13437290)
chr3 (58-213)||(18893570-18893733)
chr3 (59-199)||(17547473-17547622)
chr3 (120-210)||(15465985-15466075)
chr3 (120-213)||(43549727-43549820)
chr3 (120-210)||(5224213-5224303)
chr3 (57-210)||(26054434-26054596)
chr3 (57-154)||(29171852-29171957)
chr3 (58-154)||(17513775-17513879)
chr3 (37-154)||(34851278-34851405)
chr3 (27-76)||(3803845-3803894)
chr3 (136-186)||(11913711-11913761)
chr3 (138-186)||(12270568-12270616)
chr3 (138-186)||(19444576-19444624)
chr3 (138-186)||(19451142-19451190)
chr3 (136-186)||(13837055-13837105)
chr3 (142-186)||(10988901-10988945)
chr3 (138-186)||(14085521-14085569)
chr3 (138-186)||(14090922-14090970)
chr3 (138-186)||(14647118-14647166)
chr3 (138-186)||(49400521-49400569)
chr3 (159-213)||(10555194-10555248)
chr3 (136-186)||(51602611-51602661)
chr3 (159-213)||(55291712-55291766)
chr3 (58-98)||(23392820-23392860)
chr3 (54-98)||(52337952-52337996)
chr3 (51-102)||(9534338-9534389)
chr3 (159-213)||(3803701-3803755)
chr3 (159-213)||(46722697-46722751)
chr3 (159-213)||(54521650-54521704)
chr3 (54-99)||(14819091-14819136)
chr3 (46-91)||(18929267-18929312)
chr3 (138-186)||(30123463-30123512)
chr3 (172-213)||(50243700-50243741)
chr3 (54-98)||(3393751-3393795)
chr3 (58-98)||(18366515-18366555)
chr3 (138-186)||(24122343-24122390)
chr3 (173-213)||(24152509-24152549)
chr3 (58-98)||(52212432-52212472)
[»] chr8 (24 HSPs)
chr8 (58-213)||(8413749-8413913)
chr8 (58-213)||(11775601-11775765)
chr8 (58-213)||(19882835-19882999)
chr8 (120-210)||(14396982-14397072)
chr8 (120-213)||(25483513-25483606)
chr8 (58-143)||(18023477-18023571)
chr8 (136-186)||(364779-364829)
chr8 (136-186)||(20387402-20387451)
chr8 (136-186)||(20494436-20494486)
chr8 (136-186)||(22433701-22433751)
chr8 (136-186)||(42559541-42559591)
chr8 (138-186)||(3698592-3698641)
chr8 (141-186)||(23826130-23826175)
chr8 (54-98)||(32950911-32950955)
chr8 (142-186)||(44432851-44432895)
chr8 (55-102)||(23482050-23482097)
chr8 (144-186)||(15635191-15635232)
chr8 (144-186)||(21325861-21325902)
chr8 (172-213)||(17460331-17460372)
chr8 (172-213)||(20455874-20455915)
chr8 (172-213)||(20463082-20463123)
chr8 (172-213)||(23661184-23661225)
chr8 (51-88)||(38184689-38184726)
chr8 (51-99)||(22919964-22920012)
[»] chr6 (29 HSPs)
chr6 (58-213)||(23225858-23226022)
chr6 (58-213)||(13765234-13765398)
chr6 (58-213)||(31021721-31021886)
chr6 (74-213)||(23956750-23956898)
chr6 (120-210)||(23415795-23415885)
chr6 (120-210)||(27557553-27557643)
chr6 (28-186)||(1268-1434)
chr6 (28-186)||(8227-8393)
chr6 (138-186)||(8759532-8759580)
chr6 (138-186)||(8767279-8767327)
chr6 (136-186)||(1254747-1254797)
chr6 (144-186)||(1588658-1588700)
chr6 (136-186)||(34296279-34296329)
chr6 (138-186)||(14593717-14593765)
chr6 (54-98)||(18659444-18659488)
chr6 (33-76)||(21470807-21470850)
chr6 (33-76)||(21477307-21477350)
chr6 (159-213)||(12943017-12943071)
chr6 (28-72)||(22347521-22347566)
chr6 (55-96)||(24441669-24441710)
chr6 (142-186)||(7430512-7430556)
chr6 (144-186)||(15816757-15816798)
chr6 (16-73)||(17026357-17026415)
chr6 (53-102)||(4477868-4477917)
chr6 (172-213)||(14978665-14978706)
chr6 (172-213)||(20556156-20556197)
chr6 (58-107)||(25469705-25469754)
chr6 (54-98)||(13750275-13750319)
chr6 (33-72)||(29266381-29266421)
[»] chr4 (32 HSPs)
chr4 (51-213)||(45005832-45006000)
chr4 (58-213)||(28386131-28386295)
chr4 (136-213)||(18230628-18230705)
chr4 (29-88)||(17143260-17143319)
chr4 (37-154)||(13447475-13447602)
chr4 (58-119)||(15712695-15712757)
chr4 (37-154)||(2584124-2584251)
chr4 (136-186)||(56114848-56114898)
chr4 (58-154)||(4830158-4830264)
chr4 (58-154)||(4833453-4833559)
chr4 (136-186)||(24046566-24046616)
chr4 (159-213)||(16277398-16277452)
chr4 (159-213)||(36038698-36038752)
chr4 (159-213)||(53387008-53387062)
chr4 (138-186)||(11201492-11201540)
chr4 (138-186)||(11208223-11208271)
chr4 (144-184)||(15415974-15416013)
chr4 (51-98)||(6512632-6512679)
chr4 (55-98)||(10705741-10705784)
chr4 (55-98)||(10919511-10919554)
chr4 (46-92)||(3338381-3338427)
chr4 (144-186)||(16370815-16370856)
chr4 (159-213)||(33849630-33849684)
chr4 (172-213)||(13043893-13043934)
chr4 (172-213)||(23802528-23802569)
chr4 (54-98)||(8711543-8711587)
chr4 (138-186)||(14049519-14049566)
chr4 (54-94)||(14931123-14931163)
chr4 (58-102)||(15408150-15408194)
chr4 (59-111)||(16370724-16370776)
chr4 (138-186)||(30147856-30147903)
chr4 (169-213)||(49547064-49547108)
[»] chr7 (34 HSPs)
chr7 (59-213)||(16107860-16108023)
chr7 (58-213)||(11661993-11662157)
chr7 (58-213)||(14188294-14188458)
chr7 (119-212)||(42374375-42374468)
chr7 (120-210)||(1856472-1856562)
chr7 (120-210)||(13917644-13917734)
chr7 (120-210)||(25926371-25926461)
chr7 (120-213)||(13648169-13648262)
chr7 (136-213)||(13256580-13256657)
chr7 (58-154)||(29005016-29005120)
chr7 (55-154)||(3288756-3288865)
chr7 (37-119)||(21733837-21733920)
chr7 (37-119)||(21734396-21734479)
chr7 (58-147)||(14190892-14190990)
chr7 (138-186)||(38829050-38829098)
chr7 (144-186)||(15727461-15727503)
chr7 (138-186)||(19617285-19617333)
chr7 (46-98)||(40554506-40554558)
chr7 (136-186)||(15214468-15214518)
chr7 (159-213)||(17505075-17505129)
chr7 (159-213)||(17548085-17548139)
chr7 (138-186)||(27565818-27565866)
chr7 (51-102)||(11311069-11311120)
chr7 (159-213)||(11304075-11304129)
chr7 (52-102)||(11382865-11382915)
chr7 (52-102)||(11389342-11389392)
chr7 (159-213)||(14105538-14105592)
chr7 (159-213)||(14415555-14415609)
chr7 (53-102)||(16009587-16009636)
chr7 (172-213)||(16462956-16462997)
chr7 (172-213)||(18455712-18455753)
chr7 (138-186)||(14152965-14153012)
chr7 (58-102)||(21230960-21231004)
chr7 (32-71)||(41781021-41781061)
[»] chr2 (18 HSPs)
chr2 (58-213)||(41300930-41301094)
chr2 (58-213)||(21072689-21072853)
chr2 (59-199)||(6477238-6477387)
chr2 (120-210)||(31346010-31346100)
chr2 (51-154)||(22703923-22704036)
chr2 (136-186)||(10039147-10039197)
chr2 (141-186)||(21132671-21132716)
chr2 (138-186)||(201611-201659)
chr2 (138-186)||(6743385-6743433)
chr2 (51-102)||(23265153-23265204)
chr2 (51-102)||(23280221-23280272)
chr2 (159-213)||(20590393-20590447)
chr2 (159-213)||(23338510-23338564)
chr2 (159-213)||(13100845-13100899)
chr2 (172-213)||(22173101-22173142)
chr2 (172-213)||(43707171-43707212)
chr2 (51-91)||(21908381-21908421)
chr2 (138-186)||(43694391-43694438)
[»] scaffold0453 (1 HSPs)
scaffold0453 (58-213)||(7014-7175)
[»] scaffold0422 (1 HSPs)
scaffold0422 (58-213)||(3851-4012)
[»] scaffold0001 (2 HSPs)
scaffold0001 (58-210)||(176683-176844)
scaffold0001 (134-210)||(169330-169406)
[»] chr1 (21 HSPs)
chr1 (58-213)||(28313236-28313400)
chr1 (59-199)||(13527716-13527865)
chr1 (120-213)||(45574091-45574184)
chr1 (120-213)||(22130097-22130190)
chr1 (58-154)||(7791559-7791663)
chr1 (138-186)||(21543046-21543094)
chr1 (138-186)||(42095029-42095077)
chr1 (159-213)||(297243-297297)
chr1 (138-186)||(2332148-2332195)
chr1 (54-98)||(18824627-18824671)
chr1 (59-98)||(18271332-18271371)
chr1 (59-98)||(18275986-18276025)
chr1 (51-102)||(18712810-18712861)
chr1 (55-102)||(32651583-32651630)
chr1 (46-83)||(11158123-11158160)
chr1 (172-213)||(13880660-13880701)
chr1 (43-76)||(25091403-25091436)
chr1 (138-186)||(21180368-21180415)
chr1 (55-111)||(21526781-21526837)
chr1 (33-72)||(24960900-24960940)
chr1 (138-186)||(29535992-29536039)
[»] scaffold0151 (1 HSPs)
scaffold0151 (59-213)||(9982-10145)
[»] scaffold0278 (1 HSPs)
scaffold0278 (67-213)||(23729-23883)
[»] scaffold0200 (1 HSPs)
scaffold0200 (120-210)||(18484-18574)
[»] scaffold0058 (1 HSPs)
scaffold0058 (120-213)||(39884-39977)
[»] scaffold0293 (1 HSPs)
scaffold0293 (120-210)||(19371-19461)
[»] scaffold0117 (2 HSPs)
scaffold0117 (120-210)||(42562-42652)
scaffold0117 (138-186)||(21762-21809)
[»] scaffold0051 (1 HSPs)
scaffold0051 (120-210)||(32033-32123)
[»] scaffold1276 (1 HSPs)
scaffold1276 (136-213)||(1027-1104)
[»] scaffold0334 (1 HSPs)
scaffold0334 (136-213)||(2012-2089)
[»] scaffold0309 (1 HSPs)
scaffold0309 (51-154)||(9083-9196)
[»] scaffold0080 (2 HSPs)
scaffold0080 (61-154)||(29928-30029)
scaffold0080 (61-154)||(35393-35494)
[»] scaffold0490 (1 HSPs)
scaffold0490 (51-154)||(5827-5940)
[»] scaffold0180 (1 HSPs)
scaffold0180 (28-88)||(11651-11711)
[»] scaffold0720 (1 HSPs)
scaffold0720 (59-154)||(442-547)
[»] scaffold0070 (1 HSPs)
scaffold0070 (136-213)||(8978-9054)
[»] scaffold0123 (1 HSPs)
scaffold0123 (55-154)||(1264-1373)
[»] scaffold0635 (1 HSPs)
scaffold0635 (136-186)||(7873-7923)
[»] scaffold0599 (1 HSPs)
scaffold0599 (136-186)||(987-1037)
[»] scaffold0077 (2 HSPs)
scaffold0077 (136-186)||(17291-17340)
scaffold0077 (136-186)||(22191-22241)
[»] scaffold0021 (1 HSPs)
scaffold0021 (62-154)||(147568-147670)
[»] scaffold0106 (2 HSPs)
scaffold0106 (138-186)||(39391-39439)
scaffold0106 (36-73)||(29522-29559)
[»] scaffold0076 (2 HSPs)
scaffold0076 (138-186)||(29284-29332)
scaffold0076 (138-186)||(34685-34733)
[»] scaffold0028 (2 HSPs)
scaffold0028 (138-186)||(46118-46166)
scaffold0028 (138-186)||(51522-51570)
[»] scaffold0020 (1 HSPs)
scaffold0020 (51-103)||(101921-101973)
[»] scaffold0011 (1 HSPs)
scaffold0011 (138-186)||(173700-173748)
[»] scaffold0546 (1 HSPs)
scaffold0546 (138-185)||(9931-9978)
[»] scaffold0222 (1 HSPs)
scaffold0222 (51-102)||(16831-16882)
[»] scaffold0109 (1 HSPs)
scaffold0109 (138-185)||(3329-3376)
[»] scaffold0388 (1 HSPs)
scaffold0388 (144-184)||(15198-15238)
[»] scaffold0107 (2 HSPs)
scaffold0107 (54-98)||(3899-3943)
scaffold0107 (58-102)||(40532-40576)
[»] scaffold0004 (3 HSPs)
scaffold0004 (50-98)||(204342-204390)
scaffold0004 (59-98)||(60435-60474)
scaffold0004 (55-102)||(116907-116954)
[»] scaffold0429 (1 HSPs)
scaffold0429 (55-98)||(1997-2040)
[»] scaffold1783 (1 HSPs)
scaffold1783 (144-186)||(1261-1302)
[»] scaffold0322 (1 HSPs)
scaffold0322 (16-73)||(20228-20286)
[»] scaffold0008 (1 HSPs)
scaffold0008 (144-186)||(11505-11546)
[»] scaffold0394 (1 HSPs)
scaffold0394 (172-213)||(12937-12978)
[»] scaffold0083 (1 HSPs)
scaffold0083 (172-213)||(42184-42225)
[»] scaffold0023 (2 HSPs)
scaffold0023 (172-213)||(163221-163262)
scaffold0023 (58-98)||(163346-163386)
[»] scaffold0962 (1 HSPs)
scaffold0962 (58-98)||(616-656)
[»] scaffold0273 (1 HSPs)
scaffold0273 (54-98)||(7687-7731)
[»] scaffold0181 (1 HSPs)
scaffold0181 (58-98)||(25521-25561)
[»] scaffold0071 (1 HSPs)
scaffold0071 (138-186)||(51915-51962)
[»] scaffold0064 (1 HSPs)
scaffold0064 (138-186)||(68902-68949)
[»] scaffold0057 (1 HSPs)
scaffold0057 (36-72)||(1187-1223)
[»] scaffold0042 (1 HSPs)
scaffold0042 (138-186)||(67618-67665)
[»] scaffold0026 (1 HSPs)
scaffold0026 (33-72)||(36585-36625)
[»] scaffold0019 (1 HSPs)
scaffold0019 (58-102)||(135484-135528)
[»] scaffold0014 (1 HSPs)
scaffold0014 (130-186)||(189646-189701)


Alignment Details
Target: chr5 (Bit Score: 122; Significance: 1e-62; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 58 - 213
Target Start/End: Original strand, 27868578 - 27868739
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa-----tgttcttaggttggataattgggattaggttt 151  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||     ||||||||||||||||||||||||||||||||    
T  27868578 taaggtaagggtgagactaacattcagtaatcatagtgtataaattctgaatttgtgatttaacatgttgttcttaggttggataattgggattaggttt 27868677  T
Q  152 tgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27868678 tgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgt 27868739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 58 - 213
Target Start/End: Original strand, 33472564 - 33472728
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattgggattagg 148  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||        |||| ||||||||||||||||||||||||    
T  33472564 taaggtaagggtgagactaacattcagtaatcatagtgtataaattctgaatttgtgatttaacatgttgttgttgttaggttggataattgggattagg 33472663  T
Q  149 ttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  33472664 ttttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgt 33472728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 119 - 213
Target Start/End: Complemental strand, 18419433 - 18419339
Alignment:
Q  119 atgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18419433 atgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgt 18419339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 51 - 154
Target Start/End: Complemental strand, 10817871 - 10817758
Alignment:
Q  51 tctgaattaaggtaagggtgagactaacactcagtaatcatagtgtat-aattctgaatttgcgatttaa--------tgttcttaggttggataattgg 141  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||        ||||||||||||||||||||||    
T  10817871 tctgaattaaggtaagggtgagactaacattcagtaatcatagtgtataaattctgaatttgtgatttaacatgttgttgttcttaggttggataattgg 10817772  T
Q  142 g-attaggttttga 154  Q
    | ||||||||||||    
T  10817771 gaattaggttttga 10817758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 21553475 - 21553525
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  21553475 aattgggtttaggttttgatcattgatttttgaattgaaaagtgtagaaac 21553525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 23539817 - 23539711
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattg-ggattag 147  Q
    ||||||||| ||||| |||||| |||||||||||||||||||| ||||||||||| |||||||        ||||||||||||||||||||| | |||||    
T  23539817 taaggtaagtgtgaggctaacattcagtaatcatagtgtataatttctgaatttgtgatttaacatgttgttgttcttaggttggataattgagaattag 23539718  T
Q  148 gttttga 154  Q
    |||||||    
T  23539717 gttttga 23539711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 43242596 - 43242644
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  43242596 ttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaac 43242644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 21980153 - 21980203
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||||||    
T  21980153 aattgggattaggttttgattttttatttttgaattaaaaagtgtagaaac 21980203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 36461009 - 36460960
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  36461009 aattgggattaggttttgattattgacttttgaa-tgaaaagtgtagaaac 36460960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 98
Target Start/End: Original strand, 22777063 - 22777110
Alignment:
Q  51 tctgaattaaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    |||||||||||||||||||||| ||||| |||| ||||||||||||||    
T  22777063 tctgaattaaggtaagggtgaggctaactctcaataatcatagtgtat 22777110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 22757903 - 22757952
Alignment:
Q  138 ttgggattaggttttgattattga-tttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  22757903 ttgggattaggttttgattattgattttttgaatgaaaaagtgtagaaac 22757952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 98
Target Start/End: Original strand, 8952038 - 8952081
Alignment:
Q  55 aattaaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    |||||||||||||||||| ||||| |||| ||||||||||||||    
T  8952038 aattaaggtaagggtgaggctaactctcaataatcatagtgtat 8952081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 18407937 - 18407988
Alignment:
Q  51 tctgaattaaggtaagggtgagactaacactcagtaatcatagtgtataatt 102  Q
    |||||||||||||||||||||||||| | |||| |||||||| | |||||||    
T  18407937 tctgaattaaggtaagggtgagactatctctcaataatcataatatataatt 18407988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 19512448 - 19512397
Alignment:
Q  51 tctgaattaaggtaagggtgagactaacactcagtaatcatagtgtataatt 102  Q
    |||||||||||||||||||||||||| | |||| |||||||| | |||||||    
T  19512448 tctgaattaaggtaagggtgagactatctctcaataatcataatctataatt 19512397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 102
Target Start/End: Original strand, 23111197 - 23111244
Alignment:
Q  55 aattaaggtaagggtgagactaacactcagtaatcatagtgtataatt 102  Q
    |||||||||||||||||||||| | |||| |||||||||| |||||||    
T  23111197 aattaaggtaagggtgagactatctctcaataatcatagtatataatt 23111244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 28370048 - 28370099
Alignment:
Q  51 tctgaattaaggtaagggtgagactaacactcagtaatcatagtgtataatt 102  Q
    |||||||||||||||||||||||||| | |||| |||||||| | |||||||    
T  28370048 tctgaattaaggtaagggtgagactatctctcaataatcataatctataatt 28370099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 41875703 - 41875757
Alignment:
Q  159 tgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||| ||| |||||||||||||||||| || | ||||||||||||||| |||||    
T  41875703 tgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgt 41875757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 22413015 - 22412974
Alignment:
Q  172 gaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||| || | |||||||||||||||||||||    
T  22413015 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgt 22412974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 1856567 - 1856614
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||  ||||||||  ||||||||||||||    
T  1856567 ttgggattaggttttgattattg-gttttgaatgaaaaagtgtagaaac 1856614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 6766720 - 6766673
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||||||||    
T  6766720 ttgggtttaggttttgattatagattgttgaattg-aaagtgtagaaac 6766673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 21663143 - 21663183
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    ||||||||||||||| ||||| |||| ||||||||||||||    
T  21663143 taaggtaagggtgaggctaactctcaataatcatagtgtat 21663183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 21674537 - 21674584
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||  ||||||||  ||||||||||||||    
T  21674537 ttgggattaggttttgattattg-gttttgaatgaaaaagtgtagaaac 21674584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 22356904 - 22356944
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    ||||||||||||||| ||||| |||| ||||||||||||||    
T  22356904 taaggtaagggtgaggctaactctcaataatcatagtgtat 22356944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 22438748 - 22438792
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataatt 102  Q
    ||||||||||||||||||| | |||| |||||||| |||||||||    
T  22438748 taaggtaagggtgagactatctctcaataatcataatgtataatt 22438792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 4e-62; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 58 - 216
Target Start/End: Original strand, 10833309 - 10833473
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa-----tgttcttaggttggataattgggattaggttt 151  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||     ||||||||||||||||||||||||||||||||    
T  10833309 taaggtaagggtgagactaacattcagtaatcatagtgtataaattctgaatttgtgatttaacatgttgttcttaggttggataattgggattaggttt 10833408  T
Q  152 tgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgtcca 216  Q
    | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10833409 tcattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgtcca 10833473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 58 - 213
Target Start/End: Complemental strand, 42579 - 42415
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattgggattagg 148  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||        |||||||||||||||||||||||||||||    
T  42579 taaggtaagggtgagactaacattcagtaatcatagtgtataaattctgaatttgtgatttaacattttgttgttcttaggttggataattgggattagg 42480  T
Q  149 ttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42479 ttttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgt 42415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 58 - 213
Target Start/End: Original strand, 16324541 - 16324705
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattgggattagg 148  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||        |||||||||||||||||||||||||||||    
T  16324541 taaggtaagggtgagactaacattcagtaatcatagtgtataaattctgaatttgtgatttaacatattgttgttcttaggttggataattgggattagg 16324640  T
Q  149 ttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    |||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||    
T  16324641 ttttgattattgatttttgaattggaaagtgtagaaaccattgaaattgtgttaagaattgatgt 16324705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 58 - 213
Target Start/End: Complemental strand, 13437290 - 13437126
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattgggattagg 148  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||  |||||||        |||||||||||||||||||||||||||||    
T  13437290 taaggtaagggtgagactaacattcagtaatcatagtgtataaattctgaatttatgatttaacatgttgttgttcttaggttggataattgggattagg 13437191  T
Q  149 ttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  13437190 ttttgattattgatttttgaattgaaaagtgtagaaaccaacgaaattgtgttaagaatcgatgt 13437126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 58 - 213
Target Start/End: Complemental strand, 18893733 - 18893570
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattgggattagg 148  Q
    ||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| |||||||        ||||||||||||||||||||||||||  |    
T  18893733 taaggtaagggtgaggctaacattcagtaatcatagtgtataaattctgaatttgtgatttaacatgttgttgttcttaggttggataattgggattttg 18893634  T
Q  149 ttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||    
T  18893633 ttttgattattgatttttgaattgaaaagtgtaaaaac-atcgtaattgtgttaagaattgatgt 18893570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 17547473 - 17547622
Alignment:
Q  59 aaggtaagggtgagactaacactcagtaatcatagtgtataattctgaatttgcgatttaa--------tgttcttaggttggataattgggatt-aggt 149  Q
    ||||| |||||||| |||||| ||||||||||||||||||||||||||||||| |||||||        |||||||||||| ||||||||||||| ||||    
T  17547473 aaggttagggtgaggctaacattcagtaatcatagtgtataattctgaatttgtgatttaacatgttgttgttcttaggttagataattgggatttaggt 17547572  T
Q  150 tttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtg 199  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17547573 tttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtg 17547622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 120 - 210
Target Start/End: Complemental strand, 15466075 - 15465985
Alignment:
Q  120 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattga 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15466075 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattga 15465985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 120 - 213
Target Start/End: Original strand, 43549727 - 43549820
Alignment:
Q  120 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  43549727 tgttcttaggttggataattgggattaggttttgattattgatttttaaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgt 43549820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 120 - 210
Target Start/End: Complemental strand, 5224303 - 5224213
Alignment:
Q  120 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattga 210  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  5224303 tgttcttaggttagataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccattgaaattgtgttaagaattga 5224213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 210
Target Start/End: Original strand, 26054434 - 26054596
Alignment:
Q  57 ttaaggtaagggtgagactaacactcagtaatcata-gtgtataattctgaatttgcgatttaa--------tgttcttaggttggataattgggattag 147  Q
    ||||||||||||||||||||||| ||| || || || |  ||| |||||||||||| |||||||        |||| |||||||||||||||| ||||||    
T  26054434 ttaaggtaagggtgagactaacattcaatattcttaagcctatgattctgaatttgtgatttaacatgttgttgttgttaggttggataattgagattag 26054533  T
Q  148 gttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattga 210  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  26054534 gttttgattattgatttttgaattgaaaattgtagaaaccatcgaaattgtgttaagaattga 26054596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 154
Target Start/End: Original strand, 29171852 - 29171957
Alignment:
Q  57 ttaaggtaagggtgagactaacactcagtaatcatagtgtataattctgaatttgcgatttaa--------tgttcttaggttggataattgggattagg 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||        ||||  |||||||||||||||||||||||    
T  29171852 ttaaggtaagggtgagactaacactcagtaatcatagtgtataattctgaatttgtgatttaacatgttgttgtttctaggttggataattgggattagg 29171951  T
Q  149 ttttga 154  Q
    ||||||    
T  29171952 ttttga 29171957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 17513879 - 17513775
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataattctgaatttgcgatttaa--------tgttcttaggttggataattgggattaggt 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||        ||||||||||||| ||||||||||||||||    
T  17513879 taaggtaagggtgagactaacactcagtaatcatagtgtataattctgaatttgtgaattaacgtgttgttgttcttaggttgaataattgggattaggt 17513780  T
Q  150 tttga 154  Q
    |||||    
T  17513779 tttga 17513775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 154
Target Start/End: Original strand, 34851278 - 34851405
Alignment:
Q  37 tgtagagttgtttgtctgaattaaggtaagggtgagactaacactcagtaatcatagtgtat-aattctgaatttgcgatttaa--------tgttctta 127  Q
    ||||||| |||| |||  |||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||| |||||||        ||||||||    
T  34851278 tgtagagctgttcgtcgaaattaaggtaagggtgaggctaacattcagtaatcatagtgtataaattctgaatttgtgatttaacatgtttttgttctta 34851377  T
Q  128 ggttggataattg-ggattaggttttga 154  Q
    ||||||||||||| | ||||||||||||    
T  34851378 ggttggataattgagaattaggttttga 34851405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 3803894 - 3803845
Alignment:
Q  27 agagagattttgtagagttgtttgtctgaattaaggtaagggtgagacta 76  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3803894 agagagattttgtagagttgttcgtctgaattaaggtaagggtgagacta 3803845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 11913761 - 11913711
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  11913761 aattgggattaggttttgattattgatttttgaatgaaaaagtgtagaaac 11913711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 12270568 - 12270616
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  12270568 ttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaac 12270616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 19444624 - 19444576
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  19444624 ttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaac 19444576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 19451190 - 19451142
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  19451190 ttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaac 19451142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 13837105 - 13837055
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||||||| |||| |||||||||||||| |||||||||||    
T  13837105 aattgggattaggttttgaatattaatttttgaattgaagagtgtagaaac 13837055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 142 - 186
Target Start/End: Original strand, 10988901 - 10988945
Alignment:
Q  142 gattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||||||||  ||||||||||||||    
T  10988901 gattaggttttgattattgatttttgaatgaaaaagtgtagaaac 10988945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 14085569 - 14085521
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  14085569 ttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaac 14085521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 14090970 - 14090922
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  14090970 ttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaac 14090922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 14647118 - 14647166
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||||||||| ||  ||||||||||||||    
T  14647118 ttgggattaggttttgattattgatttttggatgaaaaagtgtagaaac 14647166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 49400569 - 49400521
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  49400569 ttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaac 49400521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 10555248 - 10555194
Alignment:
Q  159 tgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||| ||| |||||||||||||||||| || | |||||||||||||||||||||    
T  10555248 tgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgt 10555194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 51602611 - 51602661
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||| |||||||||||||||||||| ||||||||  ||||||||||||||    
T  51602611 aattgagattaggttttgattattgacttttgaatgaaaaagtgtagaaac 51602661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 55291712 - 55291766
Alignment:
Q  159 tgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||| ||| |||||||||||||||||| || | |||||||||||||||||||||    
T  55291712 tgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgt 55291766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 23392820 - 23392860
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  23392820 taaggtaagggtgagactaactctcaataatcatagtgtat 23392860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 52337952 - 52337996
Alignment:
Q  54 gaattaaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    ||||||||||||||||||| ||||| |||| ||||||||||||||    
T  52337952 gaattaaggtaagggtgaggctaactctcaataatcatagtgtat 52337996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 9534389 - 9534338
Alignment:
Q  51 tctgaattaaggtaagggtgagactaacactcagtaatcatagtgtataatt 102  Q
    |||||||||||||||||||||||||| | |||| |||||||| | |||||||    
T  9534389 tctgaattaaggtaagggtgagactatctctcaataatcataatctataatt 9534338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 3803755 - 3803701
Alignment:
Q  159 tgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||| |||||||||||||||||||||| ||   ||||||||||||||| |||||    
T  3803755 tgattcttgaattgaaaagtgtagaaaccatgacaattgtgttaagaatcgatgt 3803701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 46722697 - 46722751
Alignment:
Q  159 tgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||| ||| |||||||||||| ||||| || | |||||||||||||||||||||    
T  46722697 tgattcttggattgaaaagtgtggaaactatggcaattgtgttaagaattgatgt 46722751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 54521704 - 54521650
Alignment:
Q  159 tgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||| ||| |||||||||||||||||| || | ||||||||||||||| |||||    
T  54521704 tgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgt 54521650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 99
Target Start/End: Complemental strand, 14819136 - 14819091
Alignment:
Q  54 gaattaaggtaagggtgagactaacactcagtaatcatagtgtata 99  Q
    ||||||||||||||||||| ||||| |||| |||||| ||||||||    
T  14819136 gaattaaggtaagggtgaggctaactctcaataatcaaagtgtata 14819091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 91
Target Start/End: Complemental strand, 18929312 - 18929267
Alignment:
Q  46 gtttgtctgaattaaggtaagggtgagactaacactcagtaatcat 91  Q
    |||| |||||||||||||||||||||||||| | |||| |||||||    
T  18929312 gtttttctgaattaaggtaagggtgagactatctctcaataatcat 18929267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 30123463 - 30123512
Alignment:
Q  138 ttgggattaggttttgattattg-atttttgaattgaaaagtgtagaaac 186  Q
    ||||||||| ||||||||||||| ||||||||||  ||||||||||||||    
T  30123463 ttgggattaagttttgattattgaatttttgaatgaaaaagtgtagaaac 30123512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 50243741 - 50243700
Alignment:
Q  172 gaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||| || | |||||||||||||||||||||    
T  50243741 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgt 50243700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 3393751 - 3393795
Alignment:
Q  54 gaattaaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    ||||||||||||||||||| ||||| | || ||||||||||||||    
T  3393751 gaattaaggtaagggtgaggctaactcccaataatcatagtgtat 3393795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 18366515 - 18366555
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    ||||||||||||||| ||||| |||| ||||||||||||||    
T  18366515 taaggtaagggtgaggctaactctcaataatcatagtgtat 18366555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 24122343 - 24122390
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||  ||||||||  ||||||||||||||    
T  24122343 ttgggattaggttttgattattg-gttttgaatgaaaaagtgtagaaac 24122390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 24152509 - 24152549
Alignment:
Q  173 aaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    |||||||||||||| || | |||||||||||||||||||||    
T  24152509 aaaagtgtagaaaccatggtaattgtgttaagaattgatgt 24152549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 52212432 - 52212472
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    ||||||||||||||| ||||| |||| ||||||||||||||    
T  52212432 taaggtaagggtgaggctaactctcaataatcatagtgtat 52212472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 116; Significance: 4e-59; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 58 - 213
Target Start/End: Original strand, 8413749 - 8413913
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattgggattagg 148  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||        |||||||||||||||||||||||||||||    
T  8413749 taaggtaagggtgagactaacattcagtaatcatagtgtataaattctgaatttgtgatttaacattttgttgttcttaggttggataattgggattagg 8413848  T
Q  149 ttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8413849 ttttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgt 8413913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 58 - 213
Target Start/End: Complemental strand, 11775765 - 11775601
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattgggattagg 148  Q
    |||||||||||||||||||||| |||||||||||||| ||||| ||||||||||| |||||||        ||||||||||||| |||||||||||||||    
T  11775765 taaggtaagggtgagactaacattcagtaatcatagtatataaattctgaatttgtgatttaacatgttgttgttcttaggttgaataattgggattagg 11775666  T
Q  149 ttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11775665 ttttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgt 11775601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 58 - 213
Target Start/End: Complemental strand, 19882999 - 19882835
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattgggattagg 148  Q
    ||||||||||||||| |||||| |||||||||||| ||||||| ||||||||||| |||||||        |||||||||||||||||||||||||||||    
T  19882999 taaggtaagggtgaggctaacattcagtaatcatattgtataaattctgaatttgtgatttaacatgttgttgttcttaggttggataattgggattagg 19882900  T
Q  149 ttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  19882899 ttttaattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaaaaattgatgt 19882835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 120 - 210
Target Start/End: Original strand, 14396982 - 14397072
Alignment:
Q  120 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattga 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  14396982 tgttcttaggttggataattgggattaggttttgattattgattttttaattgaaaagtgtagaaaccatcgaaattgtgttaagaattga 14397072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 120 - 213
Target Start/End: Original strand, 25483513 - 25483606
Alignment:
Q  120 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25483513 tgttcttaggttggataattgtgattatgttttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgt 25483606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 58 - 143
Target Start/End: Original strand, 18023477 - 18023571
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtat-aattctgaatttgcgatttaa--------tgttcttaggttggataattggga 143  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||        ||||||||||||||||||||||||    
T  18023477 taaggtaagggtgagactaacattcagtaatcatagtgtataaattctgaatttgtgatttaacattttgttgttcttaggttggataattggga 18023571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 364829 - 364779
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  364829 aattgggattaggttttgattattgatttttgaatgaaaaagtgtagaaac 364779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 20387451 - 20387402
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  20387451 aattgggattaggttttg-ttattgatttttgaattgaaaagtgtagaaac 20387402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 20494436 - 20494486
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||||| |||||||||||||||||  ||||||||||||||    
T  20494436 aattgggattaggttttaattattgatttttgaatgaaaaagtgtagaaac 20494486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 22433701 - 22433751
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| |||||    
T  22433701 aattgggattaggttttgattattaatttttgaattgaagagtgtggaaac 22433751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 42559541 - 42559591
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||||| ||||||||  ||||||||||||||    
T  42559541 aattgggattaggttttgattattgacttttgaatgaaaaagtgtagaaac 42559591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 3698641 - 3698592
Alignment:
Q  138 ttgggattaggttttgattattgat-ttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||||||||||||| ||||||||  ||||||||||||||    
T  3698641 ttgggattaggttttgattattgattttttgaatgaaaaagtgtagaaac 3698592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 23826175 - 23826130
Alignment:
Q  141 ggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||| |||||||||  ||||||||||||||    
T  23826175 ggattaggttttgattattggtttttgaatgaaaaagtgtagaaac 23826130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 32950955 - 32950911
Alignment:
Q  54 gaattaaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    ||||||||||||||||||| ||||| |||| ||||||||||||||    
T  32950955 gaattaaggtaagggtgaggctaactctcaataatcatagtgtat 32950911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 44432895 - 44432851
Alignment:
Q  142 gattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||||||||  |||||| |||||||    
T  44432895 gattaggttttgattattgatttttgaatgaaaaagtatagaaac 44432851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 102
Target Start/End: Original strand, 23482050 - 23482097
Alignment:
Q  55 aattaaggtaagggtgagactaacactcagtaatcatagtgtataatt 102  Q
    |||||||||||||||||||||| | |||| |||||||||| |||||||    
T  23482050 aattaaggtaagggtgagactatctctcaataatcatagtatataatt 23482097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 15635191 - 15635232
Alignment:
Q  144 ttaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||| ||||||||||||| |||||||||||||    
T  15635191 ttaggttttgattatagatttttgaattg-aaagtgtagaaac 15635232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 21325861 - 21325902
Alignment:
Q  144 ttaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||| |||||||||||||| ||||||||||||||||    
T  21325861 ttaggttttgaatattgatttttgaa-tgaaaagtgtagaaac 21325902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 17460331 - 17460372
Alignment:
Q  172 gaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||| || | |||||||||||||||||||||    
T  17460331 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgt 17460372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 20455915 - 20455874
Alignment:
Q  172 gaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||| || | |||||||||||||||||||||    
T  20455915 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgt 20455874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 20463123 - 20463082
Alignment:
Q  172 gaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||| || | |||||||||||||||||||||    
T  20463123 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgt 20463082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 23661225 - 23661184
Alignment:
Q  172 gaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||| || | |||||||||||||||||||||    
T  23661225 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgt 23661184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 38184689 - 38184726
Alignment:
Q  51 tctgaattaaggtaagggtgagactaacactcagtaat 88  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  38184689 tctgaattaaggtaagggtgagactaactctcaataat 38184726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 22919964 - 22920012
Alignment:
Q  51 tctgaattaaggtaagggtgagactaacactcagtaatcatagtgtata 99  Q
    ||||| |||| ||||||||||| ||||| |||| |||||||||||||||    
T  22919964 tctgatttaaagtaagggtgaggctaactctcaataatcatagtgtata 22920012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 4e-59; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 58 - 213
Target Start/End: Original strand, 23225858 - 23226022
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattgggattagg 148  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||        |||||||||||||||||||||||||||||    
T  23225858 taaggtaagggtgagactaacattcagtaatcatagtgtataaattctgaatttgtgatttaacattttgttgttcttaggttggataattgggattagg 23225957  T
Q  149 ttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23225958 ttttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgt 23226022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 58 - 213
Target Start/End: Complemental strand, 13765398 - 13765234
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattgggattagg 148  Q
    ||||||||| |||||||||||| |||||||||||||||||||| ||||||||||| |||||||        ||||||||||||||||| |||||||||||    
T  13765398 taaggtaagagtgagactaacattcagtaatcatagtgtataaattctgaatttgtgatttaacatgttgttgttcttaggttggatagttgggattagg 13765299  T
Q  149 ttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13765298 ttttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgt 13765234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 58 - 213
Target Start/End: Original strand, 31021721 - 31021886
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattgggattagg 148  Q
    |||||||||||||||||||||| |||||||||||| ||||||| ||||||||||| |||||||        |||||||||||||||||||||||||||||    
T  31021721 taaggtaagggtgagactaacattcagtaatcatattgtataaattctgaatttgtgatttaacatgttgttgttcttaggttggataattgggattagg 31021820  T
Q  149 ttttgattattgatttt-tgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  31021821 ttttgattattgattttttgaattgaaaagtgtagaaactatcgaaattgtgttaagaattgatgt 31021886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 74 - 213
Target Start/End: Complemental strand, 23956898 - 23956750
Alignment:
Q  74 ctaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattgggattaggttttgattattgattt 164  Q
    |||||| |||||||||||||||||||| ||||||||||| |||||||        |||||||||||||||||||||||||||||||||||||||||||||    
T  23956898 ctaacattcagtaatcatagtgtataaattctgaatttgtgatttaacattttgttgttcttaggttggataattgggattaggttttgattattgattt 23956799  T
Q  165 ttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23956798 ttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgt 23956750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 120 - 210
Target Start/End: Complemental strand, 23415885 - 23415795
Alignment:
Q  120 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattga 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  23415885 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagcgtagaaaccatcgaaattgtgttaagaattga 23415795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 120 - 210
Target Start/End: Complemental strand, 27557643 - 27557553
Alignment:
Q  120 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattga 210  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||    
T  27557643 tgttcttaggttggataattgggattatgttttgattattgatttttgaattgaaaagtgtagaaaccaacgaaattgtgttaataattga 27557553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 186
Target Start/End: Complemental strand, 1434 - 1268
Alignment:
Q  28 gagagattttgtagagttgtttgtctgaattaaggtaagggtgagactaacactcagtaatcatag--tgtataattctgaatttgcgattta------- 118  Q
    ||||||||||||||||||||| |||||||||||||||||||||||  |||| |||| | || ||||  ||||||||||||| |||  ||||||           
T  1434 gagagattttgtagagttgttcgtctgaattaaggtaagggtgaggttaactctcaatgattatagtttgtataattctgatttt--gatttagcaaggg 1337  T
Q  119 -atgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
      |||  |||  || || |||||||||||||||||||||||||| ||||||||  ||||||||||||||    
T  1336 gttgtggttaaatttgagaattgggattaggttttgattattgacttttgaatgaaaaagtgtagaaac 1268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 186
Target Start/End: Complemental strand, 8393 - 8227
Alignment:
Q  28 gagagattttgtagagttgtttgtctgaattaaggtaagggtgagactaacactcagtaatcatag--tgtataattctgaatttgcgattta------- 118  Q
    ||||||||||||||||||||| |||||||||||||||||||||||  |||| |||| | || ||||  ||||||||||||| |||  ||||||           
T  8393 gagagattttgtagagttgttcgtctgaattaaggtaagggtgaggttaactctcaatgattatagtttgtataattctgatttt--gatttagcaaggg 8296  T
Q  119 -atgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
      |||  |||  || || |||||||||||||||||||||||||| ||||||||  ||||||||||||||    
T  8295 gttgtggttaaatttgagaattgggattaggttttgattattgacttttgaatgaaaaagtgtagaaac 8227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 8759532 - 8759580
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  8759532 ttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaac 8759580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 8767279 - 8767327
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  8767279 ttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaac 8767327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 1254797 - 1254747
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||||| ||||||||  ||||||||||||||    
T  1254797 aattgggattaggttttgattattgacttttgaatgaaaaagtgtagaaac 1254747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 1588700 - 1588658
Alignment:
Q  144 ttaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  1588700 ttaggttttgattatagatttttgaattgaaaagtgtagaaac 1588658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 34296279 - 34296329
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||||| ||||||||  ||||||||||||||    
T  34296279 aattgggattaggttttgattattgacttttgaatgaaaaagtgtagaaac 34296329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 14593717 - 14593765
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||| |||||||||||||||||||||||  ||||||||||||||    
T  14593717 ttgggattaagttttgattattgatttttgaatgaaaaagtgtagaaac 14593765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 18659488 - 18659444
Alignment:
Q  54 gaattaaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||    
T  18659488 gaattaaggtaagggtgagactaactctcaataatcatagtgtat 18659444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 21470850 - 21470807
Alignment:
Q  33 attttgtagagttgtttgtctgaattaaggtaagggtgagacta 76  Q
    |||||||||||||||| |||||||||||||||| ||||||||||    
T  21470850 attttgtagagttgttcgtctgaattaaggtaatggtgagacta 21470807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 21477350 - 21477307
Alignment:
Q  33 attttgtagagttgtttgtctgaattaaggtaagggtgagacta 76  Q
    |||||||||| ||||| |||||||||||||||||||||||||||    
T  21477350 attttgtagaattgttcgtctgaattaaggtaagggtgagacta 21477307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 12943071 - 12943017
Alignment:
Q  159 tgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||| ||| ||||||||||||||||||||| | ||||||||||||||| |||||    
T  12943071 tgattcttggattgaaaagtgtagaaacgatggcaattgtgttaagaatcgatgt 12943017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 22347566 - 22347521
Alignment:
Q  28 gagagattttgtagagtt-gtttgtctgaattaaggtaagggtgag 72  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||    
T  22347566 gagagattttgtagagtttgttcgtctgaattaaggtaagggtgag 22347521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 24441710 - 24441669
Alignment:
Q  55 aattaaggtaagggtgagactaacactcagtaatcatagtgt 96  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  24441710 aattaaggtaagggtgagactaactctcaataatcatagtgt 24441669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 7430556 - 7430512
Alignment:
Q  142 gattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||| |||||||||||||||||||||||  ||||||||||||||    
T  7430556 gattaagttttgattattgatttttgaatgaaaaagtgtagaaac 7430512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 15816757 - 15816798
Alignment:
Q  144 ttaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||| ||||||||||||| |||||||||||||    
T  15816757 ttaggttttgattatagatttttgaattg-aaagtgtagaaac 15816798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 17026357 - 17026415
Alignment:
Q  16 agtggagaatcagagagattttgtagagtt-gtttgtctgaattaaggtaagggtgaga 73  Q
    |||| |||| |||||||| ||||| ||||| ||| ||||||||||||||||||||||||    
T  17026357 agtgaagaaccagagagagtttgttgagtttgttcgtctgaattaaggtaagggtgaga 17026415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 4477917 - 4477868
Alignment:
Q  53 tgaattaaggtaagggtgagactaacactcagtaatcatagtgtataatt 102  Q
    |||||||||||||||||||||||| | |||| |||||||| | |||||||    
T  4477917 tgaattaaggtaagggtgagactatctctcaataatcataatctataatt 4477868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 14978665 - 14978706
Alignment:
Q  172 gaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||| || | |||||||||||||||||||||    
T  14978665 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgt 14978706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 20556156 - 20556197
Alignment:
Q  172 gaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||| || | |||||||||||||||||||||    
T  20556156 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgt 20556197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 25469705 - 25469754
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataattctgaa 107  Q
    ||||||||||||||||||| | |||| |||||||| | ||||||||||||    
T  25469705 taaggtaagggtgagactatctctcaataatcataatctataattctgaa 25469754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 13750275 - 13750319
Alignment:
Q  54 gaattaaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    |||||||||||||| |||| ||||| |||| ||||||||||||||    
T  13750275 gaattaaggtaaggctgaggctaactctcaataatcatagtgtat 13750319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 29266421 - 29266381
Alignment:
Q  33 attttgtagagtt-gtttgtctgaattaaggtaagggtgag 72  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  29266421 attttgtagagtttgttcgtctgaattaaggtaagggtgag 29266381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 2e-57; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 51 - 213
Target Start/End: Complemental strand, 45006000 - 45005832
Alignment:
Q  51 tctgaattaaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa-----tgttcttaggttggataattgggat 144  Q
    |||||||||||||||||||||  |||||| |||||||||||||||||||| ||||||||||  |||||||     |||||||||||||||||||||||||    
T  45006000 tctgaattaaggtaagggtgatgctaacattcagtaatcatagtgtataaattctgaatttatgatttaacatgttgttcttaggttggataattgggat 45005901  T
Q  145 taggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  45005900 taggttttgattattgatttttgaattgaaaagtgtagaaaccattgaaattgtgttaagaattgatgt 45005832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 58 - 213
Target Start/End: Complemental strand, 28386295 - 28386131
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattgggattagg 148  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||        ||||||||||||||||||||||||||| |    
T  28386295 taaggtaagggtgagactaacattcagtaatcatagtgtataaattctgaatttgtgatttaacatgttgttgttcttaggttggataattgggattatg 28386196  T
Q  149 ttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  28386195 ttttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgt 28386131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 18230705 - 18230628
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  18230705 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaatcatcgaaattgtgttaagaattgatgt 18230628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 17143319 - 17143260
Alignment:
Q  29 agagattttgtagagttgtttgtctgaattaaggtaagggtgagactaacactcagtaat 88  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||    
T  17143319 agagattttgtagagttgttcgtctgaattaaggtaagggtgagactaactctcaataat 17143260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 37 - 154
Target Start/End: Complemental strand, 13447602 - 13447475
Alignment:
Q  37 tgtagagttgtttgtctgaattaaggtaagggtgagactaacactcagtaatcatagtgtat-aattctgaatttgcgatttaa--------tgttctta 127  Q
    ||||||| |||| |||  |||||||||||| ||||| |||||| |||||||||||||||||| ||||||||||||| |||||||        ||||||||    
T  13447602 tgtagagctgttcgtcgaaattaaggtaagagtgaggctaacattcagtaatcatagtgtataaattctgaatttgtgatttaacatgttgttgttctta 13447503  T
Q  128 ggttggataatt-gggattaggttttga 154  Q
    |||||||||||| || ||||||||||||    
T  13447502 ggttggataattaggaattaggttttga 13447475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 15712695 - 15712757
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtat-aattctgaatttgcgatttaa 119  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||    
T  15712695 taaggtaagggtgagactaacattcagtaatcatagtgtataaattctgaatttgtgatttaa 15712757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 154
Target Start/End: Original strand, 2584124 - 2584251
Alignment:
Q  37 tgtagagttgtttgtctgaattaaggtaagggtgagactaacactcagtaatcatagtgtat-aattctgaatttgcgatttaa--------tgttctta 127  Q
    ||||||| |||| |||  ||||||||||  |||||| |||||| |||||||||||||||||| ||||||||||||| |||||||        ||||||||    
T  2584124 tgtagagctgttcgtcgaaattaaggtagaggtgaggctaacattcagtaatcatagtgtataaattctgaatttgtgatttaacatgttgttgttctta 2584223  T
Q  128 ggttggataattg-ggattaggttttga 154  Q
    ||||||||||||| | ||||||||||||    
T  2584224 ggttggataattgagaattaggttttga 2584251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 56114848 - 56114898
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  56114848 aattgggattaggttttgattattgatttttgaatgaaaaagtgtagaaac 56114898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 4830158 - 4830264
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattg-ggattag 147  Q
    ||||||||| ||||| |||||| |||||||||||||||||||| ||||||||||| |||||||        ||||||||||||||||||||| | |||||    
T  4830158 taaggtaagtgtgaggctaacattcagtaatcatagtgtataatttctgaatttgtgatttaacatgttgttgttcttaggttggataattgagaattag 4830257  T
Q  148 gttttga 154  Q
    |||||||    
T  4830258 gttttga 4830264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 4833453 - 4833559
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattg-ggattag 147  Q
    ||||||||| ||||| |||||| |||||||||||||||||||| ||||||||||| |||||||        ||||||||||||||||||||| | |||||    
T  4833453 taaggtaagtgtgaggctaacattcagtaatcatagtgtataatttctgaatttgtgatttaacatgttgttgttcttaggttggataattgagaattag 4833552  T
Q  148 gttttga 154  Q
    |||||||    
T  4833553 gttttga 4833559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 24046566 - 24046616
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||| |||||||||||||||||||||||||||||  ||||||||||||||    
T  24046566 aattgagattaggttttgattattgatttttgaatgaaaaagtgtagaaac 24046616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 16277398 - 16277452
Alignment:
Q  159 tgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||| ||| |||||||||||||||||| || | |||||||||||||||||||||    
T  16277398 tgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgt 16277452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 36038752 - 36038698
Alignment:
Q  159 tgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||| ||| ||||||||||||||||||||| | ||||||||||||||| |||||    
T  36038752 tgattcttggattgaaaagtgtagaaacgatggcaattgtgttaagaatcgatgt 36038698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 53387008 - 53387062
Alignment:
Q  159 tgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||| ||| |||||||||||||||||| || | |||||||||||||||||||||    
T  53387008 tgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgt 53387062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 11201492 - 11201540
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||| |||||||||||||||||||| ||  ||||||||||||||    
T  11201492 ttgggattaagttttgattattgatttttggatgaaaaagtgtagaaac 11201540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 11208223 - 11208271
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||| |||||||||||||||||||| ||  ||||||||||||||    
T  11208223 ttgggattaagttttgattattgatttttggatgaaaaagtgtagaaac 11208271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 15415974 - 15416013
Alignment:
Q  144 ttaggttttgattattgatttttgaattgaaaagtgtagaa 184  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  15415974 ttaggttttgattat-gatttttgaattgaaaagtgtagaa 15416013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 98
Target Start/End: Complemental strand, 6512679 - 6512632
Alignment:
Q  51 tctgaattaaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    |||||||||||||||||||||| ||||| |||| || |||||||||||    
T  6512679 tctgaattaaggtaagggtgaggctaactctcaatagtcatagtgtat 6512632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 10705784 - 10705741
Alignment:
Q  55 aattaaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||    
T  10705784 aattaaggtaagggtaagactaactctcaataatcatagtgtat 10705741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 98
Target Start/End: Complemental strand, 10919554 - 10919511
Alignment:
Q  55 aattaaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||    
T  10919554 aattaaggtaagggtaagactaactctcaataatcatagtgtat 10919511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 92
Target Start/End: Complemental strand, 3338427 - 3338381
Alignment:
Q  46 gtttgtctgaattaaggtaagggtgagactaacactcagtaatcata 92  Q
    ||||||| ||||||||||||||||||| ||||| |||| ||||||||    
T  3338427 gtttgtcagaattaaggtaagggtgaggctaactctcaataatcata 3338381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 16370815 - 16370856
Alignment:
Q  144 ttaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||| ||||||||||||||| |||||||||||    
T  16370815 ttaggttttgattat-gatttttgaattgaagagtgtagaaac 16370856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 33849684 - 33849630
Alignment:
Q  159 tgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||| |||||||||||||||||||||| ||   ||||||||||||||| |||||    
T  33849684 tgattcttgaattgaaaagtgtagaaaccatgacaattgtgttaagaatcgatgt 33849630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 13043893 - 13043934
Alignment:
Q  172 gaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||| || | |||||||||||||||||||||    
T  13043893 gaaaagtgtagaaaccatagtaattgtgttaagaattgatgt 13043934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 23802528 - 23802569
Alignment:
Q  172 gaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||| || | |||||||||||||||||||||    
T  23802528 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgt 23802569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 8711587 - 8711543
Alignment:
Q  54 gaattaaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    ||||||||||||||||||  ||||| |||| ||||||||||||||    
T  8711587 gaattaaggtaagggtgaagctaactctcaataatcatagtgtat 8711543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 14049566 - 14049519
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||||||||    
T  14049566 ttgggtttaggttttgattatagattgttgaattg-aaagtgtagaaac 14049519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 94
Target Start/End: Original strand, 14931123 - 14931163
Alignment:
Q  54 gaattaaggtaagggtgagactaacactcagtaatcatagt 94  Q
    ||||||||||||||||||| ||||| |||| ||||||||||    
T  14931123 gaattaaggtaagggtgaggctaactctcaataatcatagt 14931163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 15408194 - 15408150
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataatt 102  Q
    ||||||||||||||||||| | |||| |||||||||| |||||||    
T  15408194 taaggtaagggtgagactatctctcaataatcatagtatataatt 15408150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 16370724 - 16370776
Alignment:
Q  59 aaggtaagggtgagactaacactcagtaatcatagtgtataattctgaatttg 111  Q
    |||||||||||||||||||| |||| | || |||||||||| |||||| ||||    
T  16370724 aaggtaagggtgagactaactctcaatgataatagtgtatacttctgattttg 16370776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 30147903 - 30147856
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||||||||    
T  30147903 ttgggtttaggttttgattatagattgttgaattg-aaagtgtagaaac 30147856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 49547064 - 49547108
Alignment:
Q  169 attgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    |||||||||||||||||| || | ||||||||||||||| |||||    
T  49547064 attgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgt 49547108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 4e-56; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 59 - 213
Target Start/End: Original strand, 16107860 - 16108023
Alignment:
Q  59 aaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattgggattaggt 149  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||        ||||||||||||||||||||||||||||||    
T  16107860 aaggtaagggtgagactaacattcagtaatcatagtgtataaattctgaatttgtgatttaacatgttgttgttcttaggttggataattgggattaggt 16107959  T
Q  150 tttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  16107960 tttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaatcgatgt 16108023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 58 - 213
Target Start/End: Complemental strand, 11662157 - 11661993
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattgggattagg 148  Q
    ||||||||||||||| |||||| |||||||| ||||||||||| ||||||||||| |||||||        ||||||||||||||||||||||||||| |    
T  11662157 taaggtaagggtgaggctaacattcagtaattatagtgtataaattctgaatttgtgatttaacatgttgttgttcttaggttggataattgggattatg 11662058  T
Q  149 ttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  11662057 ttttgattattgatttttgaattgaaaagtgtaaaaaccatcgaaattgtgttaagaattgatgt 11661993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 58 - 213
Target Start/End: Original strand, 14188294 - 14188458
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattgggattagg 148  Q
    ||||||||||||||| |||||| |||||||||||||||||||| ||||||||||  |||||||        ||||||||||||||||||||||||||||     
T  14188294 taaggtaagggtgaggctaacattcagtaatcatagtgtataaattctgaatttttgatttaacatgttgttgttcttaggttggataattgggattagc 14188393  T
Q  149 ttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  14188394 ttttgattattgatttttgaattgaaatgtgtagaaaccatcgaaattgtgttaagaattgatgt 14188458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 42374375 - 42374468
Alignment:
Q  119 atgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatg 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  42374375 atgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatg 42374468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 120 - 210
Target Start/End: Original strand, 1856472 - 1856562
Alignment:
Q  120 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattga 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1856472 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattga 1856562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 120 - 210
Target Start/End: Original strand, 13917644 - 13917734
Alignment:
Q  120 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattga 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13917644 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattga 13917734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 120 - 210
Target Start/End: Original strand, 25926371 - 25926461
Alignment:
Q  120 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattga 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25926371 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattga 25926461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 120 - 213
Target Start/End: Complemental strand, 13648262 - 13648169
Alignment:
Q  120 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  13648262 tgttcttaggttggataattgagattaggttttgattattgatttttgaattgaaaagtgtagaaaccatcaaaattgtgttaagaattgatgt 13648169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 13256657 - 13256580
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  13256657 aattgggattaggttttgattatttatttttgaattgaaaagtgtagaaatcatcgaaattgtgttaagaattgatgt 13256580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 29005120 - 29005016
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataattctgaatttgcgatttaa--------tgttcttaggttggataattgggattaggt 149  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||| || ||||        ||||||||||||| ||||||||||||||||    
T  29005120 taaggtaagggtgagactaacactcagtaatcatagtatataattctaaatttgtgaattaacgtgttgttgttcttaggttgaataattgggattaggt 29005021  T
Q  150 tttga 154  Q
    |||||    
T  29005020 tttga 29005016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 3288756 - 3288865
Alignment:
Q  55 aattaaggtaagggtgagactaacactcagtaatcatagtgtat-aattctgaatttgcgatttaa--------tgttcttaggttggataattggg-at 144  Q
    |||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||| |||||||        ||||||||||||||||||||||| ||    
T  3288756 aattaaggtaagggtgaggctaacattcagtaatcatagtgtataaattctgaatttgtgatttaacatgttgttgttcttaggttggataattgggaat 3288855  T
Q  145 taggttttga 154  Q
    ||||||||||    
T  3288856 taggttttga 3288865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 21733837 - 21733920
Alignment:
Q  37 tgtagagttgtttgtctgaattaaggtaagggtgagactaacactcagtaatcatagtgtat-aattctgaatttgcgatttaa 119  Q
    |||||||||||| |||  |||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||| |||||||    
T  21733837 tgtagagttgttcgtcgaaattaaggtaagggtgaggctaacattcagtaatcatagtgtataaattctgaatttgtgatttaa 21733920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 21734396 - 21734479
Alignment:
Q  37 tgtagagttgtttgtctgaattaaggtaagggtgagactaacactcagtaatcatagtgtat-aattctgaatttgcgatttaa 119  Q
    |||||||||||| |||  |||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||| |||||||    
T  21734396 tgtagagttgttcgtcgaaattaaggtaagggtgaggctaacattcagtaatcatagtgtataaattctgaatttgtgatttaa 21734479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 147
Target Start/End: Original strand, 14190892 - 14190990
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtat-aattctgaatttgcgatttaa--------tgttcttaggttggataattgggattag 147  Q
    ||||||||||||||| |||||| |||||||||||||||||| ||||||||||||  |||||||        ||||||||||||||||||||||||||||    
T  14190892 taaggtaagggtgaggctaacattcagtaatcatagtgtataaattctgaatttttgatttaacatgttgttgttcttaggttggataattgggattag 14190990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 38829098 - 38829050
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  38829098 ttgggattaggttttgattattgatttttgaatgaaaaagtgtagaaac 38829050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 15727461 - 15727503
Alignment:
Q  144 ttaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  15727461 ttaggttttgattatagatttttgaattgaaaagtgtagaaac 15727503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 19617333 - 19617285
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  19617333 ttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaac 19617285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 98
Target Start/End: Original strand, 40554506 - 40554558
Alignment:
Q  46 gtttgtctgaattaaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    ||||||| ||||||||||||||||||| ||||| |||| ||||||||||||||    
T  40554506 gtttgtcagaattaaggtaagggtgaggctaactctcaataatcatagtgtat 40554558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 15214518 - 15214468
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||||| ||||||||  |||| |||||||||    
T  15214518 aattgggattaggttttgattattgacttttgaatgaaaaaatgtagaaac 15214468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 17505075 - 17505129
Alignment:
Q  159 tgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||| ||| |||||||||||||||||| || | |||||||||||||||||||||    
T  17505075 tgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgt 17505129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 17548139 - 17548085
Alignment:
Q  159 tgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||| ||| |||||||||||||||||| || | |||||||||||||||||||||    
T  17548139 tgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgt 17548085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 27565866 - 27565818
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||| |||||||||||||||||||| ||  ||||||||||||||    
T  27565866 ttgggattatgttttgattattgatttttgtatgaaaaagtgtagaaac 27565818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 11311120 - 11311069
Alignment:
Q  51 tctgaattaaggtaagggtgagactaacactcagtaatcatagtgtataatt 102  Q
    |||||||||||||||||||||||||| | |||| |||| |||||||| ||||    
T  11311120 tctgaattaaggtaagggtgagactatctctcaataataatagtgtagaatt 11311069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 11304129 - 11304075
Alignment:
Q  159 tgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||| ||| |||||||||||||||||| || | ||||||||||||||| |||||    
T  11304129 tgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgt 11304075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 11382865 - 11382915
Alignment:
Q  52 ctgaattaaggtaagggtgagactaacactcagtaatcatagtgtataatt 102  Q
    ||||||||||||||||||||||||| | |||| |||||||| | |||||||    
T  11382865 ctgaattaaggtaagggtgagactatctctcaataatcataatatataatt 11382915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 11389342 - 11389392
Alignment:
Q  52 ctgaattaaggtaagggtgagactaacactcagtaatcatagtgtataatt 102  Q
    ||||||||||||||||||||||||| | |||| |||||||| | |||||||    
T  11389342 ctgaattaaggtaagggtgagactatctctcaataatcataatatataatt 11389392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 14105538 - 14105592
Alignment:
Q  159 tgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||| ||| |||||||||||| ||||| || | |||||||||||||||||||||    
T  14105538 tgattcttggattgaaaagtgtggaaaccatggcaattgtgttaagaattgatgt 14105592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 14415555 - 14415609
Alignment:
Q  159 tgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||| ||| |||||||||||| ||||| || | |||||||||||||||||||||    
T  14415555 tgattcttggattgaaaagtgtggaaaccatggcaattgtgttaagaattgatgt 14415609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 16009636 - 16009587
Alignment:
Q  53 tgaattaaggtaagggtgagactaacactcagtaatcatagtgtataatt 102  Q
    |||||||||||||||||||||||| | |||| |||||||| | |||||||    
T  16009636 tgaattaaggtaagggtgagactatctctcaataatcataatctataatt 16009587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 16462997 - 16462956
Alignment:
Q  172 gaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    |||| ||||||||||||| | |||||||||||||||||||||    
T  16462997 gaaatgtgtagaaacgatggcaattgtgttaagaattgatgt 16462956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 18455712 - 18455753
Alignment:
Q  172 gaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||| || | |||||||||||||||||||||    
T  18455712 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgt 18455753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 14152965 - 14153012
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||||||||    
T  14152965 ttgggtttaggttttgattatagattgttgaattg-aaagtgtagaaac 14153012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 21230960 - 21231004
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataatt 102  Q
    ||||||||||||||||||| | |||| |||||||||| |||||||    
T  21230960 taaggtaagggtgagactatctctcaataatcatagtatataatt 21231004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 71
Target Start/End: Original strand, 41781021 - 41781061
Alignment:
Q  32 gattttgtagag-ttgtttgtctgaattaaggtaagggtga 71  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  41781021 gattttgtagagcttgttcgtctgaattaaggtaagggtga 41781061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 2e-54; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 58 - 213
Target Start/End: Original strand, 41300930 - 41301094
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattgggattagg 148  Q
    ||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| |||||||        ||||||||||||||||||||| |||||||    
T  41300930 taaggtaagggtgaggctaacattcagtaatcatagtgtataaattctgaatttgtgatttaacatgttgttgttcttaggttggataattgtgattagg 41301029  T
Q  149 ttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  41301030 ttttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgt 41301094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 58 - 213
Target Start/End: Original strand, 21072689 - 21072853
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattgggattagg 148  Q
    ||||||||||||||| |||||| |||||||||||||||||||| ||||||||||| |||||||        ||||||||||||||||||||||||||||     
T  21072689 taaggtaagggtgaggctaacattcagtaatcatagtgtataaattctgaatttgtgatttaacatgttgttgttcttaggttggataattgggattaga 21072788  T
Q  149 ttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  21072789 ttttgattattgatttttgaattgaaaagtgtaaaaaccatcgaaattgtgttaagaattgatgt 21072853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 6477238 - 6477387
Alignment:
Q  59 aaggtaagggtgagactaacactcagtaatcatagtgtataattctgaatttgcgatttaa--------tgttcttaggttggataattgggatt-aggt 149  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||        |||||||||||||||||||||| ||| ||||    
T  6477238 aaggtaagggtgaggctaacattcagtaatcatagtgtataattctgaatttgtgatttaacatgttgttgttcttaggttggataattggaatttaggt 6477337  T
Q  150 tttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtg 199  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6477338 tttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtg 6477387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 120 - 210
Target Start/End: Complemental strand, 31346100 - 31346010
Alignment:
Q  120 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattga 210  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31346100 tgttcttaggttgtataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattga 31346010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 51 - 154
Target Start/End: Complemental strand, 22704036 - 22703923
Alignment:
Q  51 tctgaattaaggtaagggtgagactaacactcagtaatcatagtgtat-aattctgaatttgcgatttaa--------tgttcttaggttggataattgg 141  Q
    |||||||||||||||||||||| |||||| | |||||||||||||||| |||||| |||||| |||||||        ||||||||||||||||||||||    
T  22704036 tctgaattaaggtaagggtgaggctaacatttagtaatcatagtgtataaattctaaatttgtgatttaacatgttgttgttcttaggttggataattgg 22703937  T
Q  142 g-attaggttttga 154  Q
    | ||||||||||||    
T  22703936 gaattaggttttga 22703923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 10039147 - 10039197
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  10039147 aattgggattaggttttgattattgatttttgaatgaaaaagtgtagaaac 10039197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 21132671 - 21132716
Alignment:
Q  141 ggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||    
T  21132671 ggattaggttttgattattgatttttgaatgaaaaagtgtagaaac 21132716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 201659 - 201611
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  201659 ttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaac 201611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 6743385 - 6743433
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  6743385 ttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaac 6743433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 23265204 - 23265153
Alignment:
Q  51 tctgaattaaggtaagggtgagactaacactcagtaatcatagtgtataatt 102  Q
    |||||||||||||||||||||||||| | |||| |||||||||| |||||||    
T  23265204 tctgaattaaggtaagggtgagactatctctcaataatcatagtatataatt 23265153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 23280272 - 23280221
Alignment:
Q  51 tctgaattaaggtaagggtgagactaacactcagtaatcatagtgtataatt 102  Q
    |||||||||||||||||||||||||| | |||| |||||||||| |||||||    
T  23280272 tctgaattaaggtaagggtgagactatctctcaataatcatagtatataatt 23280221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 20590393 - 20590447
Alignment:
Q  159 tgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||| ||| |||||||||||||||||| || | |||||||||||||||||||||    
T  20590393 tgattattggattgaaaagtgtagaaaccatggcaattgtgttaagaattgatgt 20590447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 23338510 - 23338564
Alignment:
Q  159 tgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||| |||||||||||||||||||||| || | ||||||||||||||| |||||    
T  23338510 tgattcttgaattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgt 23338564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 13100845 - 13100899
Alignment:
Q  159 tgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||| ||| |||||||||||||||||| || | ||||||||||||||| |||||    
T  13100845 tgattcttggattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgt 13100899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 22173101 - 22173142
Alignment:
Q  172 gaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||| || | |||||||||||||||||||||    
T  22173101 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgt 22173142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 43707171 - 43707212
Alignment:
Q  172 gaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||| || | |||||||||||||||||||||    
T  43707171 gaaaagtgtagaaaccatggcaattgtgttaagaattgatgt 43707212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 21908421 - 21908381
Alignment:
Q  51 tctgaattaaggtaagggtgagactaacactcagtaatcat 91  Q
    |||||||||||||||||||||||||| | |||| |||||||    
T  21908421 tctgaattaaggtaagggtgagactatctctcaataatcat 21908381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 43694438 - 43694391
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||  ||||||||  ||||||||||||||    
T  43694438 ttgggattaggttttgattattg-gttttgaatgaaaaagtgtagaaac 43694391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 58 - 213
Target Start/End: Original strand, 7014 - 7175
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa-----tgttcttaggttggataattgggattaggttt 151  Q
    |||||||||||||||||||||| ||||||| |||||||||||| ||||||||||| |||||||     |||| || ||||||||||||||||||||||||    
T  7014 taaggtaagggtgagactaacattcagtaagcatagtgtataaattctgaatttgtgatttaacatgttgtttttgggttggataattgggattaggttt 7113  T
Q  152 tgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  7114 tgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaatcgatgt 7175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 58 - 213
Target Start/End: Complemental strand, 4012 - 3851
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa-----tgttcttaggttggataattgggattaggttt 151  Q
    |||||||||||||||||||||| ||| |||||||||||||||| ||||||||||| |||||||     ||||||| ||||||||||||||||||||||||    
T  4012 taaggtaagggtgagactaacattcaataatcatagtgtataaattctgaatttgtgatttaacatgttgttcttgggttggataattgggattaggttt 3913  T
Q  152 tgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    || |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  3912 tggttattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaatcgatgt 3851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 176844 - 176683
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattgggattagg 148  Q
    |||||||||||||||||||||| |||||||||||||||||||| || |||||||| |||||||        |||||||||||| ||||||||||||||||    
T  176844 taaggtaagggtgagactaacattcagtaatcatagtgtataaattttgaatttgtgatttaacatgttgttgttcttaggttcgataattgggattagg 176745  T
Q  149 ttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattga 210  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  176744 ttttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattga 176683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 169406 - 169330
Alignment:
Q  134 ataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattga 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  169406 ataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattga 169330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 1e-49; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 58 - 213
Target Start/End: Complemental strand, 28313400 - 28313236
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattgggattagg 148  Q
    ||||||||||||||  |||||| ||||||||||||| |||||| ||||||||||| |||||||        |||||||||||||||||||||||||||||    
T  28313400 taaggtaagggtgaagctaacattcagtaatcatagcgtataaattctgaatttgtgatttaacatgttgttgttcttaggttggataattgggattagg 28313301  T
Q  149 ttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  28313300 ttttgattattgatttttgaattgaaaagtgtaaaaaccatcgaaattgtgttaagaattgatgt 28313236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 59 - 199
Target Start/End: Original strand, 13527716 - 13527865
Alignment:
Q  59 aaggtaagggtgagactaacactcagtaatcatagtgtataattctgaatttgcgatttaa--------tgttcttaggttggataattgggatt-aggt 149  Q
    ||||||||| |||| |||||| ||||||||||||||||||||||||||||||| |||||||        |||||||||||||||||||||||||| | ||    
T  13527716 aaggtaaggatgaggctaacattcagtaatcatagtgtataattctgaatttgtgatttaacatattgttgttcttaggttggataattgggatttatgt 13527815  T
Q  150 tttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtg 199  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  13527816 tttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtg 13527865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 120 - 213
Target Start/End: Original strand, 45574091 - 45574184
Alignment:
Q  120 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  45574091 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgcagaaaccatcgaaattgtgttaagaattgatgt 45574184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 120 - 213
Target Start/End: Original strand, 22130097 - 22130190
Alignment:
Q  120 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  22130097 tgttcttaggtttgataattgtgattaggttttgattattgatttttgaattgaaaagtgtagaaaccatcaaaattgtgttaagaattgatgt 22130190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 7791559 - 7791663
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataattctgaatttgcgatttaa--------tgttcttaggttggataattgggattaggt 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||        ||||||||||||||||||||||||||||||    
T  7791559 taaggtaagggtgagactaacactcagtaatcatagtgtataattctgaatttgtgatttaacatgttgttgttcttaggttggataattgggattaggt 7791658  T
Q  150 tttga 154  Q
    |||||    
T  7791659 tttga 7791663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 21543094 - 21543046
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  21543094 ttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaac 21543046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 42095029 - 42095077
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  42095029 ttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaac 42095077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 297297 - 297243
Alignment:
Q  159 tgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||| |||||||||||||||||||||| || | ||||||||||||||| |||||    
T  297297 tgattcttgaattgaaaagtgtagaaaccatggcaattgtgttaagaatcgatgt 297243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 2332148 - 2332195
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||||||    
T  2332148 ttgggattaggttttgattattga-ttttgaatgaaaaagtgtagaaac 2332195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 18824671 - 18824627
Alignment:
Q  54 gaattaaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    ||||||||||||||||||| ||||| |||| ||||||||||||||    
T  18824671 gaattaaggtaagggtgaggctaactctcaataatcatagtgtat 18824627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 98
Target Start/End: Complemental strand, 18271371 - 18271332
Alignment:
Q  59 aaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    |||||||||||||||||||| |||| ||||||||||||||    
T  18271371 aaggtaagggtgagactaactctcaataatcatagtgtat 18271332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 98
Target Start/End: Complemental strand, 18276025 - 18275986
Alignment:
Q  59 aaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    |||||||||||||||||||| |||| ||||||||||||||    
T  18276025 aaggtaagggtgagactaactctcaataatcatagtgtat 18275986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 18712861 - 18712810
Alignment:
Q  51 tctgaattaaggtaagggtgagactaacactcagtaatcatagtgtataatt 102  Q
    |||||||||||||| ||||||||||| | |||| |||||||||| |||||||    
T  18712861 tctgaattaaggtatgggtgagactatctctcaataatcatagtatataatt 18712810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 102
Target Start/End: Complemental strand, 32651630 - 32651583
Alignment:
Q  55 aattaaggtaagggtgagactaacactcagtaatcatagtgtataatt 102  Q
    |||||||||||||||||||||| | |||| |||||||||| |||||||    
T  32651630 aattaaggtaagggtgagactatctctcaataatcatagtatataatt 32651583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 11158160 - 11158123
Alignment:
Q  46 gtttgtctgaattaaggtaagggtgagactaacactca 83  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  11158160 gtttttctgaattaaggtaagggtgagactaactctca 11158123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 13880660 - 13880701
Alignment:
Q  172 gaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||| || | |||||||||||||||||||||    
T  13880660 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgt 13880701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 76
Target Start/End: Original strand, 25091403 - 25091436
Alignment:
Q  43 gttgtttgtctgaattaaggtaagggtgagacta 76  Q
    |||||| |||||||||||||||||||||||||||    
T  25091403 gttgttcgtctgaattaaggtaagggtgagacta 25091436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 21180368 - 21180415
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||||||||    
T  21180368 ttgggtttaggttttgattatagattgttgaattg-aaagtgtagaaac 21180415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 21526781 - 21526837
Alignment:
Q  55 aattaaggtaagggtgagactaacactcagtaatcatagtgtataattctgaatttg 111  Q
    ||||||||||||||||||| |||| |||| | || |||||||||| |||||| ||||    
T  21526781 aattaaggtaagggtgagaataactctcaatgatgatagtgtatacttctgattttg 21526837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 24960940 - 24960900
Alignment:
Q  33 attttgtagagtt-gtttgtctgaattaaggtaagggtgag 72  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  24960940 attttgtagagtttgttcgtctgaattaaggtaagggtgag 24960900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 29536039 - 29535992
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||||||||    
T  29536039 ttgggtttaggttttgattatagattgttgaattg-aaagtgtagaaac 29535992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 59 - 213
Target Start/End: Complemental strand, 10145 - 9982
Alignment:
Q  59 aaggtaagggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattgggattaggt 149  Q
    |||||||||||||| |||||| |||||||| ||||||||||| ||||||||||| |||||||        || |||||||||||||||||||||||||||    
T  10145 aaggtaagggtgaggctaacattcagtaattatagtgtataaattctgaatttgtgatttaacatgttgttggtcttaggttggataattgggattaggt 10046  T
Q  150 tttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  10045 tttgattattgatttttgagttgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgt 9982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 67 - 213
Target Start/End: Original strand, 23729 - 23883
Alignment:
Q  67 ggtgagactaacactcagtaatcatagtgtataa-ttctgaatttgcgatttaa--------tgttcttaggttggataattgggattaggttttgatta 157  Q
    |||||| |||||| |||||||||||||||||||| ||||||||| | |||||||        ||||||||||||||||||||||||||||||||||||||    
T  23729 ggtgaggctaacattcagtaatcatagtgtataaattctgaatt-gtgatttaacatgttgttgttcttaggttggataattgggattaggttttgatta 23827  T
Q  158 ttgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  23828 ttgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgt 23883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 120 - 210
Target Start/End: Complemental strand, 18574 - 18484
Alignment:
Q  120 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattga 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18574 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattga 18484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 120 - 213
Target Start/End: Original strand, 39884 - 39977
Alignment:
Q  120 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  39884 tgttcttaggttagataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattgatgt 39977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 120 - 210
Target Start/End: Original strand, 19371 - 19461
Alignment:
Q  120 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattga 210  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19371 tgttcttaggttggataattgggattaagttttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagaattga 19461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 79; Significance: 4e-37; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 120 - 210
Target Start/End: Complemental strand, 42652 - 42562
Alignment:
Q  120 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattga 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||    
T  42652 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaaccattgaaatagtgttaagaattga 42562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 21809 - 21762
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||||||||    
T  21809 ttgggtttaggttttgattatagattgttgaattg-aaagtgtagaaac 21762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 120 - 210
Target Start/End: Complemental strand, 32123 - 32033
Alignment:
Q  120 tgttcttaggttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattga 210  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  32123 tgttcttaggttggataattgttattaggttttgattattgatttttgaattgaaaagtgtagaaaccatcgaaattgtgttaagagttga 32033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 1104 - 1027
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||| |||||||    
T  1104 aattgggattaggttttgatttttgatttttgaattgaaaagtgtagaaaccatagaaattgtgttaagagttgatgt 1027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 2089 - 2012
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||   |||||||||||||||||||||    
T  2089 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaactatgctaattgtgttaagaattgatgt 2012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 51 - 154
Target Start/End: Complemental strand, 9196 - 9083
Alignment:
Q  51 tctgaattaaggtaagggtgagactaacactcagtaatcatagtgtat-aattctgaatttgcgatttaa--------tgttcttaggttggataattgg 141  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||| |||||||        ||||||||||||||||||||||    
T  9196 tctgaattaaggtaagggtgaggctaacattcagtaatcatagtgtataaattctgaatttgtgatttaacatgttgttgttcttaggttggataattgg 9097  T
Q  142 g-attaggttttga 154  Q
    | ||||||||||||    
T  9096 gaattaggttttga 9083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 30029 - 29928
Alignment:
Q  61 ggtaagggtgagactaacactcagtaatcatagtgtataattctgaatttgcgatttaa--------tgttcttaggttggataattgggattaggtttt 152  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||| | |||||        |||||||||||||||||||||||||||||||||    
T  30029 ggtaagggtgagactaacactcagtagttatagtgtataattctgaatttgtggtttaacatgttgttgttcttaggttggataattgggattaggtttt 29930  T
Q  153 ga 154  Q
    ||    
T  29929 ga 29928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 35494 - 35393
Alignment:
Q  61 ggtaagggtgagactaacactcagtaatcatagtgtataattctgaatttgcgatttaa--------tgttcttaggttggataattgggattaggtttt 152  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||| | |||||        |||||||||||||||||||||||||||||||||    
T  35494 ggtaagggtgagactaacactcagtagttatagtgtataattctgaatttgtggtttaacatgttgttgttcttaggttggataattgggattaggtttt 35395  T
Q  153 ga 154  Q
    ||    
T  35394 ga 35393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 51 - 154
Target Start/End: Complemental strand, 5940 - 5827
Alignment:
Q  51 tctgaattaaggtaagggtgagactaacactcagtaatcatagtgtat-aattctgaatttgcgatttaa--------tgttcttaggttggataattgg 141  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||||| ||||||||||||| |||||||        ||||||||||||||||||||||    
T  5940 tctgaattaaggtaagggtgaggctaacattcaataatcatagtgtataaattctgaatttgtgatttaacatgttgttgttcttaggttggataattgg 5841  T
Q  142 g-attaggttttga 154  Q
    | ||||||||||||    
T  5840 gaattaggttttga 5827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 28 - 88
Target Start/End: Complemental strand, 11711 - 11651
Alignment:
Q  28 gagagattttgtagagttgtttgtctgaattaaggtaagggtgagactaacactcagtaat 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  11711 gagagattttgtagagttgtttgtctgaattaaggtaagggtgagactaactctcaataat 11651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 59 - 154
Target Start/End: Original strand, 442 - 547
Alignment:
Q  59 aaggtaagggtgagactaacactcagtaatcatagtgtat-aattctgaatttgcgatttaa--------tgttcttaggttggataattggg-attagg 148  Q
    |||||||||||||| |||||| |||||||||||||||||| ||||||||||||| |||||||        ||||||||||||||||||||||| ||||||    
T  442 aaggtaagggtgaggctaacattcagtaatcatagtgtataaattctgaatttgtgatttaacatgttgttgttcttaggttggataattgggaattagg 541  T
Q  149 ttttga 154  Q
    ||||||    
T  542 ttttga 547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 9054 - 8978
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    |||||||||||||||||||||||| ||||| || | ||||||||||||||| || | |||||||||||||||||||||    
T  9054 aattgggattaggttttgattattaatttt-gattagaaaagtgtagaaaccatggcaattgtgttaagaattgatgt 8978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 154
Target Start/End: Original strand, 1264 - 1373
Alignment:
Q  55 aattaaggtaagggtgagactaacactcagtaatcatagtgtat-aattctgaatttgcgatttaa--------tgttcttaggttggataattggg-at 144  Q
    |||||||||||||||||| |||||| | |||||||||||||||| ||||||||||||  |||||||        ||||||||||||||||||||||| ||    
T  1264 aattaaggtaagggtgaggctaacatttagtaatcatagtgtataaattctgaatttatgatttaacatgttgttgttcttaggttggataattgggaat 1363  T
Q  145 taggttttga 154  Q
    ||||||||||    
T  1364 taggttttga 1373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 7923 - 7873
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  7923 aattgggattaggttttgattattgatttttgaatgaaaaagtgtagaaac 7873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 186
Target Start/End: Complemental strand, 1037 - 987
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  1037 aattgggattaggttttgattattgatttttgaatgaaaaagtgtagaaac 987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 17291 - 17340
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17291 aattgggattaggttttgattattgatttttgaa-tgaaaagtgtagaaac 17340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 22191 - 22241
Alignment:
Q  136 aattgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||| |||||||||||||||||||||||||||||  ||||||||||||||    
T  22191 aattgagattaggttttgattattgatttttgaatgaaaaagtgtagaaac 22241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 62 - 154
Target Start/End: Complemental strand, 147670 - 147568
Alignment:
Q  62 gtaagggtgagactaacactcagtaatcatagtgtat-aattctgaatttgcgatttaa--------tgttcttaggttggataattggg-attaggttt 151  Q
    ||||||||||| |||||| |||||||||||||||||| |||||| |||||| |||||||        ||||||||||||||||||||||| |||||||||    
T  147670 gtaagggtgaggctaacattcagtaatcatagtgtataaattctaaatttgtgatttaacatgttgttgttcttaggttggataattgggaattaggttt 147571  T
Q  152 tga 154  Q
    |||    
T  147570 tga 147568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 39439 - 39391
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  39439 ttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaac 39391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 29559 - 29522
Alignment:
Q  36 ttgtagagttgtttgtctgaattaaggtaagggtgaga 73  Q
    |||||||||||||  |||||||||||||||||||||||    
T  29559 ttgtagagttgttcatctgaattaaggtaagggtgaga 29522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 29284 - 29332
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  29284 ttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaac 29332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 34685 - 34733
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  34685 ttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaac 34733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 46118 - 46166
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  46118 ttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaac 46166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 51522 - 51570
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  51522 ttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaac 51570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 103
Target Start/End: Original strand, 101921 - 101973
Alignment:
Q  51 tctgaattaaggtaagggtgagactaacactcagtaatcatagtgtataattc 103  Q
    |||||||||||||||||||||||||| | |||| |||||||||| ||||||||    
T  101921 tctgaattaaggtaagggtgagactatctctcaataatcatagtatataattc 101973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 173700 - 173748
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  173700 ttgggattaggttttgattattggtttttgaatgaaaaagtgtagaaac 173748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 185
Target Start/End: Original strand, 9931 - 9978
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaa 185  Q
    |||| ||||||||||||||||||||||||||||  |||||||||||||    
T  9931 ttggaattaggttttgattattgatttttgaatgaaaaagtgtagaaa 9978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 16882 - 16831
Alignment:
Q  51 tctgaattaaggtaagggtgagactaacactcagtaatcatagtgtataatt 102  Q
    |||||||||||||||||||||||||| | |||| |||||||||| |||||||    
T  16882 tctgaattaaggtaagggtgagactatctctcaataatcatagtatataatt 16831  T

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Target: scaffold0109 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 185
Target Start/End: Complemental strand, 3376 - 3329
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaa 185  Q
    |||| ||||||||||||||||||||||||||||  |||||||||||||    
T  3376 ttggaattaggttttgattattgatttttgaatgaaaaagtgtagaaa 3329  T

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Target: scaffold0388 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 184
Target Start/End: Original strand, 15198 - 15238
Alignment:
Q  144 ttaggttttgattattgatttttgaattgaaaagtgtagaa 184  Q
    ||||||||| ||| |||||||||||||||||||||||||||    
T  15198 ttaggttttaattgttgatttttgaattgaaaagtgtagaa 15238  T

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Target: scaffold0107 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 3943 - 3899
Alignment:
Q  54 gaattaaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    ||||||||||||||||||| ||||| |||| ||||||||||||||    
T  3943 gaattaaggtaagggtgaggctaactctcaataatcatagtgtat 3899  T

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Target: scaffold0107; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 40532 - 40576
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataatt 102  Q
    ||||||||||||||||||| | |||| |||||||||| |||||||    
T  40532 taaggtaagggtgagactatctctcaataatcatagtatataatt 40576  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000001; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 204342 - 204390
Alignment:
Q  50 gtctgaattaaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    ||||||||||||||||||||||| ||||| | || ||||||||||||||    
T  204342 gtctgaattaaggtaagggtgaggctaactcccaataatcatagtgtat 204390  T

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Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 98
Target Start/End: Complemental strand, 60474 - 60435
Alignment:
Q  59 aaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    |||||||||||||||||||| |||| ||||||||||||||    
T  60474 aaggtaagggtgagactaactctcaataatcatagtgtat 60435  T

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Target: scaffold0004; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 102
Target Start/End: Complemental strand, 116954 - 116907
Alignment:
Q  55 aattaaggtaagggtgagactaacactcagtaatcatagtgtataatt 102  Q
    |||||||||||||||||||||| | |||| |||||||||| |||||||    
T  116954 aattaaggtaagggtgagactatctctcaataatcatagtatataatt 116907  T

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Target: scaffold0429 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 98
Target Start/End: Original strand, 1997 - 2040
Alignment:
Q  55 aattaaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    |||||||||||||||||| ||||| |||| ||||||||||||||    
T  1997 aattaaggtaagggtgaggctaactctcaataatcatagtgtat 2040  T

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Target: scaffold1783 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1783
Description:

Target: scaffold1783; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 186
Target Start/End: Complemental strand, 1302 - 1261
Alignment:
Q  144 ttaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||| ||||||||||||| |||||||||||||    
T  1302 ttaggttttgattatagatttttgaattg-aaagtgtagaaac 1261  T

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Target: scaffold0322 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 20286 - 20228
Alignment:
Q  16 agtggagaatcagagagattttgtagagtt-gtttgtctgaattaaggtaagggtgaga 73  Q
    |||| |||| |||||||| ||||| ||||| ||| ||||||||||||||||||||||||    
T  20286 agtgaagaaccagagagagtttgttgagtttgttcgtctgaattaaggtaagggtgaga 20228  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 186
Target Start/End: Original strand, 11505 - 11546
Alignment:
Q  144 ttaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||||||||||||| ||||||||||||| |||||||||||||    
T  11505 ttaggttttgattatagatttttgaattg-aaagtgtagaaac 11546  T

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Target: scaffold0394 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 12978 - 12937
Alignment:
Q  172 gaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||| || | |||||||||||||||||||||    
T  12978 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgt 12937  T

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Target: scaffold0083 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 42225 - 42184
Alignment:
Q  172 gaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||| || | |||||||||||||||||||||    
T  42225 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgt 42184  T

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Target: scaffold0023 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 163262 - 163221
Alignment:
Q  172 gaaaagtgtagaaacgatcgaaattgtgttaagaattgatgt 213  Q
    ||||||||||||||| || | |||||||||||||||||||||    
T  163262 gaaaagtgtagaaaccatggtaattgtgttaagaattgatgt 163221  T

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Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 163386 - 163346
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    ||||||||||||||| ||||| |||| ||||||||||||||    
T  163386 taaggtaagggtgaggctaactctcaataatcatagtgtat 163346  T

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Target: scaffold0962 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0962
Description:

Target: scaffold0962; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 616 - 656
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    ||||||||||||||| ||||| |||| ||||||||||||||    
T  616 taaggtaagggtgaggctaactctcaataatcatagtgtat 656  T

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Target: scaffold0273 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 7731 - 7687
Alignment:
Q  54 gaattaaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    ||||||||||||||||||| ||||| |||| |||||||| |||||    
T  7731 gaattaaggtaagggtgaggctaactctcaataatcatattgtat 7687  T

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Target: scaffold0181 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 25521 - 25561
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtat 98  Q
    ||||||||||||||| ||||| |||| ||||||||||||||    
T  25521 taaggtaagggtgaggctaactctcaataatcatagtgtat 25561  T

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Target: scaffold0071 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 51962 - 51915
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||||||||    
T  51962 ttgggtttaggttttgattatagattgttgaattg-aaagtgtagaaac 51915  T

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Target: scaffold0064 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 68949 - 68902
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||||||||    
T  68949 ttgggtttaggttttgattatagattgttgaattg-aaagtgtagaaac 68902  T

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Target: scaffold0057 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 1187 - 1223
Alignment:
Q  36 ttgtagagttgtttgtctgaattaaggtaagggtgag 72  Q
    |||||||||||||  ||||||||||||||||||||||    
T  1187 ttgtagagttgttcatctgaattaaggtaagggtgag 1223  T

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Target: scaffold0042 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 67665 - 67618
Alignment:
Q  138 ttgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||||||||    
T  67665 ttgggtttaggttttgattatagattgttgaattg-aaagtgtagaaac 67618  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 36625 - 36585
Alignment:
Q  33 attttgtagagtt-gtttgtctgaattaaggtaagggtgag 72  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  36625 attttgtagagtttgttcgtctgaattaaggtaagggtgag 36585  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 135528 - 135484
Alignment:
Q  58 taaggtaagggtgagactaacactcagtaatcatagtgtataatt 102  Q
    ||||||||||||||||||| | |||| |||||||||| |||||||    
T  135528 taaggtaagggtgagactatctctcaataatcatagtatataatt 135484  T

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Target: scaffold0014 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 186
Target Start/End: Complemental strand, 189701 - 189646
Alignment:
Q  130 ttggataattgggattaggttttgattattgatttttgaattgaaaagtgtagaaac 186  Q
    ||||| ||| ||| ||||||||||||||| ||||||||||||||| |||||| ||||    
T  189701 ttggaaaatgggggttaggttttgattat-gatttttgaattgaagagtgtacaaac 189646  T

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