View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8810A_low_379 (Length: 219)
Name: NF8810A_low_379
Description: NF8810A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8810A_low_379 |
 |  |
|
| [»] scaffold0007 (1 HSPs) |
 |  |  |
|
| [»] scaffold0985 (1 HSPs) |
 |  |  |
|
| [»] scaffold0114 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 15 - 190
Target Start/End: Complemental strand, 17454537 - 17454362
Alignment:
| Q |
15 |
acatcaatgaaaccgacatcttgtatagcttgacggaatcccctgataagccaatttggtctagtggctcttcctttcttctcatcggagtgaaggatat |
114 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17454537 |
acatcaatgagccctacatcttgtatagcttgacggaatcccctgataagccaatttggtctagtggctcttcctttcttctcatcggagtgaaggatat |
17454438 |
T |
 |
| Q |
115 |
cattaaaatctcccattagacaccaagggaaattaatttgactagcaagaccccgaataaaattccaagagtctct |
190 |
Q |
| |
|
|||||||||||||||||||||||||||| | |||||||| | |||||| || |||||||||||||||||||||||| |
|
|
| T |
17454437 |
cattaaaatctcccattagacaccaaggtagattaatttaattagcaatactccgaataaaattccaagagtctct |
17454362 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 33 - 190
Target Start/End: Original strand, 15095144 - 15095301
Alignment:
| Q |
33 |
tcttgtatagcttgacggaatcccctgataagccaatttggtctagtggctcttcctttcttctcatcggagtgaaggatatcattaaaatctcccatta |
132 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||| | || || ||||| |||| |||||| ||||| || |||||||| |||||||||| |
|
|
| T |
15095144 |
tcttgtatagcttgacgaaatcccctgataagccaatttggtctaatagccctaccttttttctgatcggaatgaagaatgtcattaaagtctcccatta |
15095243 |
T |
 |
| Q |
133 |
gacaccaagggaaattaatttgactagcaagaccccgaataaaattccaagagtctct |
190 |
Q |
| |
|
||||||| | ||| |||||| |||||||| | |||||| ||||||||| ||||||| |
|
|
| T |
15095244 |
gacaccacgataaagtaattttcctagcaaggctccgaatgaaattccaatagtctct |
15095301 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 136; Significance: 4e-71; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 15 - 190
Target Start/End: Original strand, 14509752 - 14509927
Alignment:
| Q |
15 |
acatcaatgaaaccgacatcttgtatagcttgacggaatcccctgataagccaatttggtctagtggctcttcctttcttctcatcggagtgaaggatat |
114 |
Q |
| |
|
|||||||||| ||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
14509752 |
acatcaatgagaccaacatcttgtatagaatgacggaaccccctgataagccaatttggtctagtggctctacctttcttctcatcggaatgaaggatat |
14509851 |
T |
 |
| Q |
115 |
cattaaaatctcccattagacaccaagggaaattaatttgactagcaagaccccgaataaaattccaagagtctct |
190 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
14509852 |
cattaaaatctcccatttgacaccaaggtaaattaatttgtctagcaagaccccgaataaaattccaagagtctct |
14509927 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 15 - 190
Target Start/End: Complemental strand, 2436158 - 2435983
Alignment:
| Q |
15 |
acatcaatgaaaccgacatcttgtatagcttgacggaatcccctgataagccaatttggtctagtggctcttcctttcttctcatcggagtgaaggatat |
114 |
Q |
| |
|
|||||||| | ||| ||| |||| ||||||| || |||||||| || |||||||| ||||||||||| || ||||| |||||||| | ||| || || | |
|
|
| T |
2436158 |
acatcaataagaccaacagcttgaatagcttctcgaaatcccctaatgagccaattaggtctagtggccctcccttttttctcatctgcgtggagtatgt |
2436059 |
T |
 |
| Q |
115 |
cattaaaatctcccattagacaccaagggaaattaatttgactagcaagaccccgaataaaattccaagagtctct |
190 |
Q |
| |
|
|||||||||| ||||| || |||||||| || || || | || |||||||| ||||||||||||||||| ||||| |
|
|
| T |
2436058 |
cattaaaatcccccatcaggcaccaaggtaagtttatcggtctggcaagaccacgaataaaattccaagaatctct |
2435983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 34931674 - 34931535
Alignment:
| Q |
51 |
aatcccctgataagccaatttggtctagtggctcttcctttcttctcatcggagtgaaggatatcattaaaatctcccattagacaccaagggaaattaa |
150 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||| || ||||| ||||| | | || || || ||||||||||| ||||| || |||||||| ||||| | |
|
|
| T |
34931674 |
aatcccctaataagccaattaggtctagtggccctcccttttttctcgtacgcatggagaatgtcattaaaatcccccatcaggcaccaaggtaaattta |
34931575 |
T |
 |
| Q |
151 |
tttgactagcaagaccccgaataaaattccaagagtctct |
190 |
Q |
| |
|
| || ||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
34931574 |
tctgtctagcaagaccacgaataaaattccaagaatctct |
34931535 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 190
Target Start/End: Original strand, 8971968 - 8972071
Alignment:
| Q |
87 |
cctttcttctcatcggagtgaaggatatcattaaaatctcccattagacaccaagggaaattaatttgactagcaagaccccgaataaaattccaagagt |
186 |
Q |
| |
|
|||||||||||||| | || ||||||||||||||||||||||||| |||||| || | | ||||||||| |||||||| ||||| |||||||| |||| |
|
|
| T |
8971968 |
cctttcttctcatcagcatgtaggatatcattaaaatctcccattaaacaccatggtatagtaatttgaccagcaagactacgaatgaaattccatgagt |
8972067 |
T |
 |
| Q |
187 |
ctct |
190 |
Q |
| |
|
|||| |
|
|
| T |
8972068 |
ctct |
8972071 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 63 - 190
Target Start/End: Complemental strand, 15786537 - 15786410
Alignment:
| Q |
63 |
agccaatttggtctagtggctcttcctttcttctcatcggagtgaaggatatcattaaaatctcccattagacaccaagggaaattaatttgactagcaa |
162 |
Q |
| |
|
|||||||| ||||||||||||||||| || || || || | ||||| || ||||||||||| |||||||||||||| || |||||||| | || |||| |
|
|
| T |
15786537 |
agccaattaggtctagtggctcttccctttttttcgtcagcatgaagaatgtcattaaaatcccccattagacaccagggtaaattaatattgcttgcaa |
15786438 |
T |
 |
| Q |
163 |
gaccccgaataaaattccaagagtctct |
190 |
Q |
| |
|
||| |||| |||||||||||||||||| |
|
|
| T |
15786437 |
gacgacgaagaaaattccaagagtctct |
15786410 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 31 - 190
Target Start/End: Original strand, 5616273 - 5616432
Alignment:
| Q |
31 |
catcttgtatagcttgacggaatcccctgataagccaatttggtctagtggctcttcctttcttctcatcggagtgaaggatatcattaaaatctcccat |
130 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||| |
|
|
| T |
5616273 |
catcttgtgtagcttgacgaaatcccctgataagccaatttggtctagtggcccttccttttttctcatcggcatgaaggatatcattaaaatctcccat |
5616372 |
T |
 |
| Q |
131 |
tagacaccaagggaaattaatttgactagcaagaccccgaataaaattccaagagtctct |
190 |
Q |
| |
|
||| |||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
5616373 |
taggcaccaaggtaaatttatttgtctagcaagaccccgaataaaattccaagagtctct |
5616432 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 97; Significance: 8e-48; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 30 - 190
Target Start/End: Complemental strand, 20467715 - 20467555
Alignment:
| Q |
30 |
acatcttgtatagcttgacggaatcccctgataagccaatttggtctagtggctcttcctttcttctcatcggagtgaaggatatcattaaaatctccca |
129 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| || ||||| |||| |||||||| ||||||||||||| |
|
|
| T |
20467715 |
acatcttgtatagcttgacggaagcccttgataagccaatttggtctagtggctcttccttttttttcatctgagtagaggatatcgttaaaatctccca |
20467616 |
T |
 |
| Q |
130 |
ttagacaccaagggaaattaatttgactagcaagaccccgaataaaattccaagagtctct |
190 |
Q |
| |
|
||| ||||||||| | | ||||||| ||||||||| |||||||||||||||||| ||||| |
|
|
| T |
20467615 |
ttatacaccaaggaagactaatttggttagcaagactccgaataaaattccaagaatctct |
20467555 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 33 - 190
Target Start/End: Complemental strand, 27068898 - 27068741
Alignment:
| Q |
33 |
tcttgtatagcttgacggaatcccctgataagccaatttggtctagtggctcttcctttcttctcatcggagtgaaggatatcattaaaatctcccatta |
132 |
Q |
| |
|
|||||||||||||| ||||| ||| | |||||||| ||||||||||||||||||||||| || ||||| |||||||||||||| |||||||||||||| | |
|
|
| T |
27068898 |
tcttgtatagcttgtcggaagccctttataagccagtttggtctagtggctcttccttttttttcatctgagtgaaggatatcgttaaaatctcccatga |
27068799 |
T |
 |
| Q |
133 |
gacaccaagggaaattaatttgactagcaagaccccgaataaaattccaagagtctct |
190 |
Q |
| |
|
||||||||| | | |||| || ||||||||| |||||||||||||||||||||||| |
|
|
| T |
27068798 |
tacaccaaggtagactaatctggttagcaagactccgaataaaattccaagagtctct |
27068741 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 90; Significance: 1e-43; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 33 - 190
Target Start/End: Complemental strand, 42761816 - 42761659
Alignment:
| Q |
33 |
tcttgtatagcttgacggaatcccctgataagccaatttggtctagtggctcttcctttcttctcatcggagtgaaggatatcattaaaatctcccatta |
132 |
Q |
| |
|
|||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||||| || ||||| |||||||||||||| |||||||||||||| | |
|
|
| T |
42761816 |
tcttgtatagcttgtcggaagcccttgataagccagtttggtctagtggctcttccttttttttcatctgagtgaaggatatcgttaaaatctcccatga |
42761717 |
T |
 |
| Q |
133 |
gacaccaagggaaattaatttgactagcaagaccccgaataaaattccaagagtctct |
190 |
Q |
| |
|
||||||||| | | |||| || ||||||||| |||||||||||||||||||||||| |
|
|
| T |
42761716 |
tacaccaaggtagactaatctggttagcaagactccgaataaaattccaagagtctct |
42761659 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 63 - 190
Target Start/End: Complemental strand, 8721204 - 8721077
Alignment:
| Q |
63 |
agccaatttggtctagtggctcttcctttcttctcatcggagtgaaggatatcattaaaatctcccattagacaccaagggaaattaatttgactagcaa |
162 |
Q |
| |
|
|||||||| ||||||||||||||||| || || || |||| ||||| || ||||||||||| ||||||||||||||||| |||||||| | || |||| |
|
|
| T |
8721204 |
agccaattaggtctagtggctcttccctttttttcgtcggcatgaagaatgtcattaaaatcccccattagacaccaaggtaaattaatattgcttgcaa |
8721105 |
T |
 |
| Q |
163 |
gaccccgaataaaattccaagagtctct |
190 |
Q |
| |
|
||| |||| |||||||||||||||||| |
|
|
| T |
8721104 |
gacgacgaagaaaattccaagagtctct |
8721077 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 43 - 190
Target Start/End: Complemental strand, 20584217 - 20584070
Alignment:
| Q |
43 |
cttgacggaatcccctgataagccaatttggtctagtggctcttcctttcttctcatcggagtgaaggatatcattaaaatctcccattagacaccaagg |
142 |
Q |
| |
|
||||||| ||||| || || |||||||| ||||| || || ||||||||||||||||| | || ||||||||||||||||| ||||||| |||||| || |
|
|
| T |
20584217 |
cttgacgaaatcctctaatgagccaattgggtctggtagcccttcctttcttctcatcagcatggaggatatcattaaaatcccccattaaacaccatgg |
20584118 |
T |
 |
| Q |
143 |
gaaattaatttgactagcaagaccccgaataaaattccaagagtctct |
190 |
Q |
| |
|
| ||| ||||| | |||||||| ||||| |||||||| |||||||| |
|
|
| T |
20584117 |
tagattgatttgtccagcaagactacgaatgaaattccatgagtctct |
20584070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 190
Target Start/End: Original strand, 238247 - 238402
Alignment:
| Q |
35 |
ttgtatagcttgacggaatcccctgataagccaatttggtctagtggctcttcctttcttctcatcggagtgaaggatatcattaaaatctcccattaga |
134 |
Q |
| |
|
|||||| |||||||| || ||||||||||||||||||||||| ||||| || ||||| ||||| ||||| || || || |||||||| |||||||||||| |
|
|
| T |
238247 |
ttgtatggcttgacgaaagcccctgataagccaatttggtctggtggccctaccttttttctcctcggaatgtagaatgtcattaaagtctcccattaga |
238346 |
T |
 |
| Q |
135 |
caccaagggaaattaatttgactagcaagaccccgaataaaattccaagagtctct |
190 |
Q |
| |
|
||||| || ||| | ||||| |||||||| | | |||| ||||||||||||||||| |
|
|
| T |
238347 |
caccacggtaaagtgatttgcctagcaaggctctgaatgaaattccaagagtctct |
238402 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 33 - 190
Target Start/End: Original strand, 25598356 - 25598513
Alignment:
| Q |
33 |
tcttgtatagcttgacggaatcccctgataagccaatttggtctagtggctcttcctttcttctcatcggagtgaaggatatcattaaaatctcccatta |
132 |
Q |
| |
|
|||||| | |||||||| || ||||||||||||||||||||||| ||||| || ||||| ||||| ||||||||||| || |||||||| || ||||| | |
|
|
| T |
25598356 |
tcttgtgttgcttgacgaaagcccctgataagccaatttggtctggtggccctaccttttttctcctcggagtgaagtatgtcattaaagtcacccataa |
25598455 |
T |
 |
| Q |
133 |
gacaccaagggaaattaatttgactagcaagaccccgaataaaattccaagagtctct |
190 |
Q |
| |
|
||||||| || ||| | ||||| |||||||||| || ||| ||||||||||| ||||| |
|
|
| T |
25598456 |
gacaccacggtaaagtgatttgcctagcaagactcctaatgaaattccaagattctct |
25598513 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0985 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0985
Description:
Target: scaffold0985; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 34 - 189
Target Start/End: Original strand, 1037 - 1192
Alignment:
| Q |
34 |
cttgtatagcttgacggaatcccctgataagccaatttggtctagtggctcttcctttcttctcatcggagtgaaggatatcattaaaatctcccattag |
133 |
Q |
| |
|
|||| ||||||| || |||||||| || |||||||| ||||||||||| || ||||| ||||||| | ||||| |||||||||||||| ||||| || |
|
|
| T |
1037 |
cttgaatagcttctcgaaatcccctaattagccaattaggtctagtggccctcccttttttctcatatgcatgaagaatatcattaaaatcccccatcag |
1136 |
T |
 |
| Q |
134 |
acaccaagggaaattaatttgactagcaagaccccgaataaaattccaagagtctc |
189 |
Q |
| |
|
||||||||| ||||| || || ||||||||||| ||||||||||||||||| |||| |
|
|
| T |
1137 |
acaccaaggtaaatttatctgtctagcaagaccacgaataaaattccaagaatctc |
1192 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 52; Significance: 5e-21; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 43 - 190
Target Start/End: Complemental strand, 21695342 - 21695195
Alignment:
| Q |
43 |
cttgacggaatcccctgataagccaatttggtctagtggctcttcctttcttctcatcggagtgaaggatatcattaaaatctcccattagacaccaagg |
142 |
Q |
| |
|
||||||| |||||||| || |||||||| ||||| || || ||||||||||| |||| | || || |||||||||||||||||||||| |||||| || |
|
|
| T |
21695342 |
cttgacgaaatccccttatgagccaattgggtctggtagcccttcctttcttttcattagcatggagaatatcattaaaatctcccattaaacaccatgg |
21695243 |
T |
 |
| Q |
143 |
gaaattaatttgactagcaagaccccgaataaaattccaagagtctct |
190 |
Q |
| |
|
| ||||||||| | |||||| || |||||||| ||||| |||||||| |
|
|
| T |
21695242 |
tagattaatttgcccagcaaggccacgaataaagttccacgagtctct |
21695195 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 10512329 - 10512214
Alignment:
| Q |
51 |
aatcccctgataagccaatttggtctagtggctcttcctttcttctcatcggagtgaaggatatcattaaaatctcccattagacaccaagggaaattaa |
150 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||| || ||||| |||| ||| | ||||| ||||| |||||||| ||||| ||||||||||| |||||| |
|
|
| T |
10512329 |
aatcccctgataagccaattgggtctggtggccctcccttttttctgatcagcatgaagaatatcgttaaaatcccccatcagacaccaaggtgaattaa |
10512230 |
T |
 |
| Q |
151 |
tttgactagcaagacc |
166 |
Q |
| |
|
| || ||||||||||| |
|
|
| T |
10512229 |
tctgtctagcaagacc |
10512214 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 57 - 190
Target Start/End: Complemental strand, 19496903 - 19496770
Alignment:
| Q |
57 |
ctgataagccaatttggtctagtggctcttcctttcttctcatcggagtgaaggatatcattaaaatctcccattagacaccaagggaaattaatttgac |
156 |
Q |
| |
|
||||| |||||||| ||||||||| ||||||| || ||||| |||| ||||| |||||||||||||| || ||||| || || || |||||||| | |
|
|
| T |
19496903 |
ctgatgagccaattaggtctagtgactcttccctttttctcgtcggcatgaagaatatcattaaaatccccaattaggcaacacggtaaattaatactgc |
19496804 |
T |
 |
| Q |
157 |
tagcaagaccccgaataaaattccaagagtctct |
190 |
Q |
| |
|
||||||||| |||| ||||||||||||| |||| |
|
|
| T |
19496803 |
tagcaagacgacgaagaaaattccaagagcctct |
19496770 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0114 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0114
Description:
Target: scaffold0114; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 27329 - 27467
Alignment:
| Q |
51 |
aatcccctgataagccaatttggtctagtggctcttcctttcttctcatcggagtgaaggatatcattaaaatctcccattagacaccaagggaaattaa |
150 |
Q |
| |
|
|||||||| || |||||||| ||||||||||| || ||||| ||||| || | || || || ||||||||||| |||||||| |||||||| ||||| |
|
|
| T |
27329 |
aatcccctaatgagccaattaggtctagtggccctcccttttttctcgtctgcatggagaatgtcattaaaatcccccattaggcaccaaggtaaatttt |
27428 |
T |
 |
| Q |
151 |
tttgactagcaagaccccgaataaaattccaagagtctct |
190 |
Q |
| |
|
| || ||||||||||| ||||| ||||||||||| ||||| |
|
|
| T |
27429 |
tctgtctagcaagaccacgaat-aaattccaagaatctct |
27467 |
T |
 |
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Target: chr8 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 25753466 - 25753605
Alignment:
| Q |
51 |
aatcccctgataagccaatttggtctagtggctcttcctttcttctcatcggagtgaaggatatcattaaaatctcccattagacaccaagggaaattaa |
150 |
Q |
| |
|
|||||||| || |||||||| ||||||||||| || ||||| ||||| || | || || || ||||||||||| ||||| || |||||||| ||||| | |
|
|
| T |
25753466 |
aatcccctaatgagccaattaggtctagtggccctcccttttttctcgtctgcatggagaatgtcattaaaatcccccatcaggcaccaaggtaaattta |
25753565 |
T |
 |
| Q |
151 |
tttgactagcaagaccccgaataaaattccaagagtctct |
190 |
Q |
| |
|
| | ||||||||||| || |||||||||||||| ||||| |
|
|
| T |
25753566 |
tctttctagcaagaccacggataaaattccaagaatctct |
25753605 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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