View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8810A_low_386 (Length: 217)

Name: NF8810A_low_386
Description: NF8810A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8810A_low_386
NF8810A_low_386
[»] scaffold0503 (1 HSPs)
scaffold0503 (15-217)||(11781-11983)
[»] chr3 (29 HSPs)
chr3 (15-217)||(53070798-53071000)
chr3 (73-204)||(45796785-45796916)
chr3 (73-212)||(49390007-49390143)
chr3 (122-217)||(20630472-20630567)
chr3 (82-204)||(23413630-23413752)
chr3 (124-217)||(18440232-18440325)
chr3 (124-217)||(19485306-19485399)
chr3 (73-217)||(1465747-1465888)
chr3 (122-204)||(14497131-14497213)
chr3 (122-217)||(17538035-17538124)
chr3 (167-217)||(5206700-5206750)
chr3 (167-217)||(14507809-14507859)
chr3 (167-217)||(15932551-15932601)
chr3 (167-217)||(17548612-17548662)
chr3 (167-217)||(40806901-40806951)
chr3 (167-217)||(41173416-41173466)
chr3 (167-217)||(43890081-43890131)
chr3 (168-217)||(13031823-13031872)
chr3 (122-217)||(13026671-13026760)
chr3 (122-217)||(22307618-22307707)
chr3 (167-217)||(11886855-11886905)
chr3 (73-153)||(12269285-12269362)
chr3 (167-217)||(17044001-17044051)
chr3 (167-217)||(17520067-17520117)
chr3 (167-217)||(17534864-17534914)
chr3 (167-217)||(18700771-18700821)
chr3 (15-92)||(22110453-22110530)
chr3 (167-217)||(30175611-30175661)
chr3 (167-217)||(40811716-40811766)
[»] chr4 (14 HSPs)
chr4 (23-217)||(6190280-6190474)
chr4 (15-183)||(21815730-21815898)
chr4 (73-204)||(3514829-3514960)
chr4 (101-217)||(21815865-21815981)
chr4 (73-204)||(15869083-15869214)
chr4 (73-204)||(32850999-32851130)
chr4 (73-217)||(13844246-13844387)
chr4 (113-217)||(19857225-19857329)
chr4 (73-217)||(15098992-15099133)
chr4 (73-217)||(361898-362039)
chr4 (167-217)||(44102079-44102130)
chr4 (167-217)||(10357578-10357628)
chr4 (167-217)||(35812534-35812584)
chr4 (124-153)||(46642598-46642627)
[»] scaffold0034 (1 HSPs)
scaffold0034 (15-213)||(51984-52182)
[»] chr6 (15 HSPs)
chr6 (15-217)||(18456523-18456736)
chr6 (15-217)||(18461683-18461896)
chr6 (15-177)||(18821945-18822108)
chr6 (101-217)||(18822081-18822197)
chr6 (73-217)||(25956958-25957099)
chr6 (113-204)||(27850833-27850924)
chr6 (135-217)||(18319538-18319620)
chr6 (167-217)||(17742994-17743044)
chr6 (167-217)||(1595334-1595385)
chr6 (167-217)||(16133733-16133783)
chr6 (167-217)||(18708405-18708455)
chr6 (167-217)||(19444343-19444393)
chr6 (167-217)||(23017252-23017302)
chr6 (185-217)||(27573394-27573426)
chr6 (185-217)||(31733653-31733685)
[»] scaffold0056 (1 HSPs)
scaffold0056 (15-217)||(79429-79631)
[»] chr2 (12 HSPs)
chr2 (23-217)||(32452038-32452232)
chr2 (167-217)||(5032461-5032511)
chr2 (167-217)||(9974830-9974880)
chr2 (167-217)||(19202301-19202351)
chr2 (167-217)||(22689585-22689635)
chr2 (167-217)||(22694181-22694231)
chr2 (167-217)||(24435958-24436008)
chr2 (169-216)||(6576142-6576189)
chr2 (167-217)||(6478347-6478397)
chr2 (167-217)||(24781960-24782010)
chr2 (15-92)||(22413239-22413315)
chr2 (122-158)||(7672482-7672518)
[»] chr8 (13 HSPs)
chr8 (15-205)||(19801526-19801716)
chr8 (73-217)||(38550328-38550469)
chr8 (73-212)||(39833633-39833769)
chr8 (73-213)||(20982962-20983099)
chr8 (73-217)||(27472625-27472766)
chr8 (124-217)||(13428427-13428520)
chr8 (122-217)||(1323458-1323555)
chr8 (167-217)||(19801719-19801769)
chr8 (167-217)||(24713126-24713176)
chr8 (167-217)||(39937107-39937157)
chr8 (122-153)||(24713207-24713238)
chr8 (167-217)||(18833233-18833283)
chr8 (167-217)||(19127896-19127946)
[»] chr7 (20 HSPs)
chr7 (15-177)||(12756816-12756978)
chr7 (73-217)||(37727874-37728015)
chr7 (73-217)||(9390033-9390174)
chr7 (73-217)||(17232272-17232413)
chr7 (73-217)||(6170439-6170580)
chr7 (73-217)||(45847960-45848101)
chr7 (140-217)||(14270435-14270512)
chr7 (141-204)||(1543467-1543530)
chr7 (162-217)||(8468136-8468191)
chr7 (167-217)||(8852262-8852312)
chr7 (167-217)||(32300906-32300956)
chr7 (167-217)||(38227289-38227339)
chr7 (168-217)||(11066331-11066380)
chr7 (167-217)||(12371207-12371257)
chr7 (167-217)||(12371249-12371299)
chr7 (167-217)||(13150675-13150725)
chr7 (167-217)||(20619148-20619198)
chr7 (167-217)||(20619190-20619240)
chr7 (167-212)||(18075582-18075627)
chr7 (101-133)||(1543476-1543508)
[»] scaffold0031 (2 HSPs)
scaffold0031 (15-183)||(20523-20691)
scaffold0031 (101-217)||(20658-20774)
[»] scaffold0716 (1 HSPs)
scaffold0716 (73-204)||(4516-4647)
[»] scaffold0075 (1 HSPs)
scaffold0075 (73-204)||(8669-8800)
[»] scaffold0192 (2 HSPs)
scaffold0192 (102-204)||(9701-9803)
scaffold0192 (101-134)||(9722-9755)
[»] scaffold0235 (2 HSPs)
scaffold0235 (73-204)||(13180-13311)
scaffold0235 (73-204)||(24882-25012)
[»] scaffold0098 (1 HSPs)
scaffold0098 (73-204)||(34767-34898)
[»] chr1 (18 HSPs)
chr1 (73-217)||(43542761-43542902)
chr1 (73-217)||(28194786-28194927)
chr1 (73-217)||(41305924-41306065)
chr1 (73-217)||(35982016-35982157)
chr1 (74-217)||(20636548-20636688)
chr1 (124-217)||(43697017-43697110)
chr1 (124-217)||(46382940-46383033)
chr1 (167-217)||(431544-431594)
chr1 (167-217)||(35088380-35088430)
chr1 (15-92)||(16368387-16368463)
chr1 (15-92)||(50686555-50686631)
chr1 (122-153)||(35088503-35088534)
chr1 (167-217)||(41227790-41227840)
chr1 (168-217)||(20587635-20587684)
chr1 (168-217)||(20592173-20592222)
chr1 (167-216)||(20634671-20634720)
chr1 (15-47)||(41050137-41050169)
chr1 (185-217)||(48300768-48300800)
[»] scaffold0116 (1 HSPs)
scaffold0116 (73-217)||(44121-44262)
[»] chr5 (5 HSPs)
chr5 (73-217)||(5889496-5889637)
chr5 (68-217)||(21741873-21742019)
chr5 (159-217)||(29915436-29915494)
chr5 (167-213)||(21309063-21309109)
chr5 (185-217)||(19920620-19920652)
[»] scaffold0810 (1 HSPs)
scaffold0810 (113-217)||(2688-2792)
[»] scaffold0029 (1 HSPs)
scaffold0029 (73-204)||(74469-74600)
[»] scaffold1792 (1 HSPs)
scaffold1792 (73-217)||(39-179)
[»] scaffold0230 (2 HSPs)
scaffold0230 (73-217)||(20790-20931)
scaffold0230 (73-217)||(23721-23861)
[»] scaffold0045 (1 HSPs)
scaffold0045 (113-204)||(47049-47140)
[»] scaffold0035 (1 HSPs)
scaffold0035 (73-217)||(106208-106349)
[»] scaffold0064 (1 HSPs)
scaffold0064 (167-217)||(57705-57755)
[»] scaffold0047 (1 HSPs)
scaffold0047 (167-217)||(77991-78041)
[»] scaffold0036 (1 HSPs)
scaffold0036 (167-217)||(78449-78499)
[»] scaffold0737 (2 HSPs)
scaffold0737 (168-217)||(6786-6835)
scaffold0737 (15-47)||(1899-1931)
[»] scaffold0010 (1 HSPs)
scaffold0010 (15-79)||(60817-60880)
[»] scaffold1351 (1 HSPs)
scaffold1351 (122-153)||(1402-1433)
[»] scaffold0001 (1 HSPs)
scaffold0001 (122-153)||(76737-76768)
[»] scaffold0853 (1 HSPs)
scaffold0853 (167-217)||(2936-2986)
[»] scaffold0507 (1 HSPs)
scaffold0507 (171-217)||(3025-3071)
[»] scaffold0450 (1 HSPs)
scaffold0450 (167-217)||(13588-13638)
[»] scaffold0375 (2 HSPs)
scaffold0375 (167-217)||(9399-9449)
scaffold0375 (167-217)||(9441-9491)
[»] scaffold0371 (1 HSPs)
scaffold0371 (167-217)||(2788-2838)
[»] scaffold0188 (1 HSPs)
scaffold0188 (167-217)||(698-748)
[»] scaffold0134 (1 HSPs)
scaffold0134 (119-153)||(10258-10292)
[»] scaffold0117 (1 HSPs)
scaffold0117 (167-217)||(41286-41336)
[»] scaffold0111 (2 HSPs)
scaffold0111 (167-217)||(7219-7269)
scaffold0111 (167-217)||(14338-14388)
[»] scaffold1403 (1 HSPs)
scaffold1403 (15-92)||(494-570)
[»] scaffold0509 (1 HSPs)
scaffold0509 (185-217)||(9915-9947)


Alignment Details
Target: scaffold0503 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 15 - 217
Target Start/End: Complemental strand, 11983 - 11781
Alignment:
Q  15 agatgaaggatgatgttccaatttattggatttgcattaagaagtcgatgttctaaaatgttaagaagttgagtccattgcatacgcataatacgagatg 114  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11983 agatgaaggatgatgttccaatttattggatttgtattaagaagtcgatgttctaaaatgttaagaagttgagtccattgcatatgcataatacgagatg 11884  T
Q  115 ggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaatacgatgggggc 214  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  11883 ggagagagcttgattctctgtaatgtatatttatacataatacgcgatggtagagggcttgatgctctgagagcctatttacgctcaatacgatgggggc 11784  T
Q  215 ttg 217  Q
    |||    
T  11783 ttg 11781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 183; Significance: 4e-99; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 15 - 217
Target Start/End: Original strand, 53070798 - 53071000
Alignment:
Q  15 agatgaaggatgatgttccaatttattggatttgcattaagaagtcgatgttctaaaatgttaagaagttgagtccattgcatacgcataatacgagatg 114  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53070798 agatgaaggatgatgtttcaatttattggatttgtattaagaagtcgatgttctaaaatgttaagaagttgagtccattgcatacgcataatacgagatg 53070897  T
Q  115 ggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaatacgatgggggc 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||    
T  53070898 ggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatgctgtgagagcctatttacgctcaatacgatgagggc 53070997  T
Q  215 ttg 217  Q
    |||    
T  53070998 ttg 53071000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 73 - 204
Target Start/End: Complemental strand, 45796916 - 45796785
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    ||||| || ||| |||||||||||||  ||||||  |||||||| ||| |||||||||||||||||||||||||||||| |||  | |||||||||||||    
T  45796916 tgttaggatgttaagtccattgcatattcataatctgagatgggggagggcttgatgctctgtaatgtatatttatacacaatctgagatgggagagggc 45796817  T
Q  173 ttgatactctgagagcctatttacgctcaata 204  Q
    ||||| ||||| ||||||||||||||||||||    
T  45796816 ttgatgctctgggagcctatttacgctcaata 45796785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 73 - 212
Target Start/End: Original strand, 49390007 - 49390143
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||||||| ||||||| |||||||||| |||  ||||   |||| || |||||||||||||||||||||||||||||||||||| | || || |||||||    
T  49390007 tgttaagatgttgagttcattgcatactcatt-tacgt--tgggtgacagcttgatgctctgtaatgtatatttatacataatatgtgaaggtagagggc 49390103  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatgggg 212  Q
    ||||| |||||||||||||||||||||||||||| |||||    
T  49390104 ttgatgctctgagagcctatttacgctcaatacgttgggg 49390143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 20630472 - 20630567
Alignment:
Q  122 gcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||||||||||||||||||||||||||| | || ||||||||||||||| ||||| |||||||||||||||||||| | ||||||||||    
T  20630472 gcttgatgctctgtaatgtatatttatacataatatgtgaagggagagggcttgatgctctgtgagcctatttacgctcaatatgttgggggcttg 20630567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 82 - 204
Target Start/End: Original strand, 23413630 - 23413752
Alignment:
Q  82 gttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactc 181  Q
    |||||||||||||||||  ||||||  |||||||| ||| |||||||||||| ||||||||||||||||| |||  | |||||||||||||||||| |||    
T  23413630 gttgagtccattgcatattcataatctgagatgggggagggcttgatgctctataatgtatatttatacacaatctgagatgggagagggcttgatgctc 23413729  T
Q  182 tgagagcctatttacgctcaata 204  Q
    |  ||||||||||||||||||||    
T  23413730 taggagcctatttacgctcaata 23413752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 124 - 217
Target Start/End: Original strand, 18440232 - 18440325
Alignment:
Q  124 ttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||||||||||||||||||||||||  | || ||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||    
T  18440232 ttgatgctctgtaatgtatatttatacataatttgtgaagggagagggcttgatgctctgtgagcctatttacgctcaatacgttgggggcttg 18440325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 124 - 217
Target Start/End: Original strand, 19485306 - 19485399
Alignment:
Q  124 ttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||||||||||||||||||||||||  | || ||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||    
T  19485306 ttgatgctctgtaatgtatatttatacataatttgtgaagggagagggcttgatgctctgtgagcctatttacgctcaatacgttgggggcttg 19485399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 73 - 217
Target Start/End: Original strand, 1465747 - 1465888
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||||||| |||||||||||||||||| |||  ||||   |||| ||| |||||||||||||||||||||||||| |||||||| | || ||||||| |     
T  1465747 tgttaagatgttgagtccattgcatactcatt-tacgt--tgggtgagggcttgatgctctgtaatgtatatttaaacataatatgtgaagggagagaga 1465843  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| ||||||||||| |||||||| | ||||||||||    
T  1465844 ttgatgctctgtgagcctatttaagctcaataagttgggggcttg 1465888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 204
Target Start/End: Complemental strand, 14497213 - 14497131
Alignment:
Q  122 gcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaata 204  Q
    ||||||| |||||||||||||||||||||| |||  | ||| |||||||||||||| ||||| ||||||||||||||||||||    
T  14497213 gcttgatactctgtaatgtatatttatacacaatctgagataggagagggcttgatgctctgggagcctatttacgctcaata 14497131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 217
Target Start/End: Complemental strand, 17538124 - 17538035
Alignment:
Q  122 gcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||| |||||||||||||||||||||| || |        ||||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  17538124 gcttgatgccctgtaatgtatatttatacatattatgtt------gagggcttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 17538035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 5206700 - 5206750
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| | ||| |||||||||||||||||||||||||||||||||    
T  5206700 gagggtttgatgccctgtgagcctatttacgctcaatacgatgggggcttg 5206750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 14507859 - 14507809
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  14507859 gagggcttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 14507809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 15932551 - 15932601
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  15932551 gagggcttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 15932601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 17548612 - 17548662
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  17548612 gagggcttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 17548662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 40806951 - 40806901
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  40806951 gagggcttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 40806901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 41173416 - 41173466
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  41173416 gagggcttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 41173466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 43890081 - 43890131
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  43890081 gagggcttgatgccctgggagcctatttacgctcaatacgttgggggcttg 43890131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 13031823 - 13031872
Alignment:
Q  168 agggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    |||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  13031823 agggcttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 13031872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 13026671 - 13026760
Alignment:
Q  122 gcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||| |||||||||||||||||||||| || |        ||||||||||| |  || |||||||||||||||||||||| ||||||||||    
T  13026671 gcttgatgccctgtaatgtatatttatacatattatgtt------gagggcttgatgccttgtgagcctatttacgctcaatacgttgggggcttg 13026760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 22307618 - 22307707
Alignment:
Q  122 gcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||| |||||||||||||||||||||| || |        ||||||||||| | ||| |||||||||||||||||||||| || |||||||    
T  22307618 gcttgatgccctgtaatgtatatttatacatattatgtt------gagggcttgatgccctgtgagcctatttacgctcaatacgttgagggcttg 22307707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 11886855 - 11886905
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| || || |||||||||||||||||||| | ||||||||||    
T  11886855 gagggcttgatgctatgtgagcctatttacgctcaatatgttgggggcttg 11886905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 153
Target Start/End: Complemental strand, 12269362 - 12269285
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacata 153  Q
    |||||||| ||||||||||||||||||   | ||   || |||| ||| |||||||||||||||||||| |||||||||||    
T  12269362 tgttaagatgttgagtccattgcatac---ttatttaagttgggtgagggcttgatgctctgtaatgtacatttatacata 12269285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 17044051 - 17044001
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| | ||| |||||||||||||||||||||| ||||||||||    
T  17044051 gagggtttgattccctgtgagcctatttacgctcaatacgttgggggcttg 17044001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 17520067 - 17520117
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| | ||| |||||||||||||||||||||| ||||||||||    
T  17520067 gagggtttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 17520117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 17534864 - 17534914
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| | ||| |||||||||||||||||||||| ||||||||||    
T  17534864 gagggtttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 17534914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 18700771 - 18700821
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    |||| |||||| | ||| |||||||||||||||||||||| ||||||||||    
T  18700771 gaggtcttgatgccctgggagcctatttacgctcaatacgttgggggcttg 18700821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 22110453 - 22110530
Alignment:
Q  15 agatgaaggatgatgttccaatttattggatttgcattaagaagtcgatg-ttctaaaatgttaagaagttgagtccat 92  Q
    ||||||||||||||||||||| |||||||||||  | ||||| |||| || |||||| ||||||||  |||||||||||    
T  22110453 agatgaaggatgatgttccaaattattggatttata-taagaggtcgttgtttctaagatgttaagttgttgagtccat 22110530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 30175611 - 30175661
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| | ||| |||||||||||||||||||||| ||||||||||    
T  30175611 gagggtttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 30175661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 40811766 - 40811716
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| | ||| |||||||||||||||||||||| ||||||||||    
T  40811766 gagggtttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 40811716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 171; Significance: 5e-92; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 23 - 217
Target Start/End: Complemental strand, 6190474 - 6190280
Alignment:
Q  23 gatgatgttccaatttattggatttgcattaagaagtcgatgttctaaaatgttaagaagttgagtccattgcatacgcataatacgagatgggagagag 122  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  6190474 gatgatgttccaatttattggatttgtattaagaagtcgatgttctaaaatgttaaggagttgagtccattgcatacgcataatacgagatggtagagag 6190375  T
Q  123 cttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6190374 cttgatgctctgtaatgtatatttatacataatacacgatggtagagggcttgatgctctgagagcctatttacgctcaatacgatgggggcttg 6190280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 15 - 183
Target Start/End: Original strand, 21815730 - 21815898
Alignment:
Q  15 agatgaaggatgatgttccaatttattggatttgcattaagaagtcgatgttctaaaatgttaagaagttgagtccattgcatacgcataatacgagatg 114  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21815730 agatgaaggatgatgttccaatttattggatttgtattaagaagtcgatgttctaaaatgttaagaagttgagtccattacatacgcataatacgagatg 21815829  T
Q  115 ggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctg 183  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||| |||||    
T  21815830 ggagagagcttgatgctctgtaatgtatatttatacataacacgagatgggagagagcttgatgctctg 21815898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 73 - 204
Target Start/End: Complemental strand, 3514960 - 3514829
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  3514960 tgttaagatgttgagtccattgcatactcataatacgagatgggagagggcttgatgatctgtaatgtatatttatacataatacgagatgggagagggc 3514861  T
Q  173 ttgatactctgagagcctatttacgctcaata 204  Q
    ||||| | ||||||||||||||||||||||||    
T  3514860 ttgatgcactgagagcctatttacgctcaata 3514829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 101 - 217
Target Start/End: Original strand, 21815865 - 21815981
Alignment:
Q  101 cataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctc 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| || |||||||||||||||||||    
T  21815865 cataacacgagatgggagagagcttgatgctctgtaatgtatatttatacataacacacgatgggagagggcttgatgctatgagagcctatttacgctc 21815964  T
Q  201 aatacgatgggggcttg 217  Q
    |||||||||||||||||    
T  21815965 aatacgatgggggcttg 21815981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 73 - 204
Target Start/End: Original strand, 15869083 - 15869214
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    ||||| || |||||||||||||||||| ||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15869083 tgttaggatgttgagtccattgcatactcataatacgtgatgggggagggcttgatgctctgtaatgtatatttatacataatacgagatgggagagggc 15869182  T
Q  173 ttgatactctgagagcctatttacgctcaata 204  Q
    ||||| || | |||||||||||||||||||||    
T  15869183 ttgatgctataagagcctatttacgctcaata 15869214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 73 - 204
Target Start/End: Complemental strand, 32851130 - 32850999
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    ||||| || |||||||||||||||||  ||||||| |||||||| ||| |||||||||||||||||||||||||||||| |||  | |||||||||||||    
T  32851130 tgttaggatgttgagtccattgcatattcataatatgagatgggggagggcttgatgctctgtaatgtatatttatacacaatctgagatgggagagggc 32851031  T
Q  173 ttgatactctgagagcctatttacgctcaata 204  Q
    ||||| ||||| ||||||||||||||||||||    
T  32851030 ttgatgctctgggagcctatttacgctcaata 32850999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 73 - 217
Target Start/End: Complemental strand, 13844387 - 13844246
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||||||| |||||||||||||||||| |||  ||||   |||| ||| ||||||||||||||||||||||||||||||||||| | || |||||||| |    
T  13844387 tgttaagatgttgagtccattgcatactcatt-tacgt--tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaagggagaggac 13844291  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| ||||||||||| |||||||||| ||||||||||    
T  13844290 ttgatgctctgtgagcctatttaagctcaatacgttgggggcttg 13844246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 113 - 217
Target Start/End: Complemental strand, 19857329 - 19857225
Alignment:
Q  113 tgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaatacgatgggg 212  Q
    |||| ||| ||||||||||||||||||||||||||||||||||| | || ||||||||||||||| ||||| |||||||||||||||||||| | |||||    
T  19857329 tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaagggagagggcttgatgctctgtgagcctatttacgctcaatatgttgggg 19857230  T
Q  213 gcttg 217  Q
    |||||    
T  19857229 gcttg 19857225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 73 - 217
Target Start/End: Complemental strand, 15099133 - 15098992
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||||| | |||||||||||||||||| |||  ||||   |||| ||| ||||||||||||||||||||||||||||||||||| | || ||| |||||     
T  15099133 tgttaaaatgttgagtccattgcatactcatt-tacgt--tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaagggggagggt 15099037  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| |||||||||||||||||||||| ||||||||||    
T  15099036 ttgatgctctgtgagcctatttacgctcaatacgttgggggcttg 15098992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 73 - 217
Target Start/End: Complemental strand, 362039 - 361898
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    ||||||||  ||||||||||||||||| |||  ||||   |||| ||| ||||||||||||||||||||||||||||||||||| | || ||||||| ||    
T  362039 tgttaagatattgagtccattgcatactcatt-tacgt--tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaagggagagagc 361943  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| |||||||||||| ||||||| | ||||||||||    
T  361942 ttgatgctctgtgagcctatttacactcaatatgttgggggcttg 361898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 44102130 - 44102079
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctc-aatacgatgggggcttg 217  Q
    ||||||||||| | |||||||||||||||||||| |||||| ||||||||||    
T  44102130 gagggcttgatgccctgagagcctatttacgctcaaatacgttgggggcttg 44102079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 10357578 - 10357628
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| | ||| |||||||||||||||||||||| ||||||||||    
T  10357578 gagggtttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 10357628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 35812534 - 35812584
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| |  || |||||||||||||||||||||| ||||||||||    
T  35812534 gagggcttgatgccatgtgagcctatttacgctcaatacgttgggggcttg 35812584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 124 - 153
Target Start/End: Complemental strand, 46642627 - 46642598
Alignment:
Q  124 ttgatgctctgtaatgtatatttatacata 153  Q
    ||||||||||||||||||||||||||||||    
T  46642627 ttgatgctctgtaatgtatatttatacata 46642598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 15 - 213
Target Start/End: Original strand, 51984 - 52182
Alignment:
Q  15 agatgaaggatgatgttccaatttattggatttgcattaagaagtcgatgttctaaaatgttaagaagttgagtccattgcatacgcataatacgagatg 114  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  51984 agataaaggatgatgttccaatttattggatttgtattaagaagtcgatgttctaaaatgttaaggagttgagtccattgcatacgcataatacgagatg 52083  T
Q  115 ggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaatacgatggggg 213  Q
    | ||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  52084 gtagatagcttgatgctctgtaatgtatatttatacataacacgcgatggtagagggcttgatgctctgagagcctatttacgctcaatacgatggggg 52182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 164; Significance: 8e-88; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 15 - 217
Target Start/End: Complemental strand, 18456736 - 18456523
Alignment:
Q  15 agatgaaggatgatgttccaatttattggatttgcattaagaagtcgatgttctaaaatgttaagaagttgagtccattgcatacgcataatacgagatg 114  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18456736 agatgaaggatgatgttccaatttattggatttgtattaagaagtcgatgttctaaaatgttaggaagttgagtccattgcatacgcataatacgagatg 18456637  T
Q  115 gga-----------gagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaat 203  Q
    |||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18456636 ggaacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatcctctgagagcctatttacgctcaat 18456537  T
Q  204 acgatgggggcttg 217  Q
    ||||||||||||||    
T  18456536 acgatgggggcttg 18456523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 15 - 217
Target Start/End: Complemental strand, 18461896 - 18461683
Alignment:
Q  15 agatgaaggatgatgttccaatttattggatttgcattaagaagtcgatgttctaaaatgttaagaagttgagtccattgcatacgcataatacgagatg 114  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18461896 agatgaaggatgatgttccaatttattggatttgtattaagaagtcgatgttctaaaatgttaggaagttgagtccattgcatacgcataatacgagatg 18461797  T
Q  115 gga-----------gagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaat 203  Q
    |||           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18461796 ggaacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatcctctgagagcctatttacgctcaat 18461697  T
Q  204 acgatgggggcttg 217  Q
    ||||||||||||||    
T  18461696 acgatgggggcttg 18461683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 15 - 177
Target Start/End: Original strand, 18821945 - 18822108
Alignment:
Q  15 agatgaaggatgatgttccaatttattggatttgcattaagaa-gtcgatgttctaaaatgttaagaagttgagtccattgcatacgcataatacgagat 113  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18821945 agatgaaggatgatgttccaatttattggatttgtattaagaaagtcgatgttctaaaatgttgagaagttgagtccattgcatacgcataatacgagat 18822044  T
Q  114 gggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgat 177  Q
    || |||||||||||||||||||||||||||||||||||||||| | ||||| |||| |||||||    
T  18822045 ggtagagagcttgatgctctgtaatgtatatttatacataatatgtgatggtagagagcttgat 18822108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 101 - 217
Target Start/End: Original strand, 18822081 - 18822197
Alignment:
Q  101 cataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctc 200  Q
    ||||||| | ||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  18822081 cataatatgtgatggtagagagcttgatgctttgtaatgtatatttatacataatacgcgatggtagagggcttgatgctctgagagcctatttacgctc 18822180  T
Q  201 aatacgatgggggcttg 217  Q
    |||||||||||||||||    
T  18822181 aatacgatgggggcttg 18822197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 73 - 217
Target Start/End: Original strand, 25956958 - 25957099
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||||||| |||||||||||||||||| |||  ||||   |||| ||| ||||||||||||||||||||||||||||||||||| | || ||||||||||    
T  25956958 tgttaagatgttgagtccattgcatactcatt-tacgt--tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaagggagagggc 25957054  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| |||||||||||||||||||||| ||||||||||    
T  25957055 ttgatgctctgtgagcctatttacgctcaatacgttgggggcttg 25957099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 113 - 204
Target Start/End: Complemental strand, 27850924 - 27850833
Alignment:
Q  113 tgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaata 204  Q
    |||| ||| |||||||||||| |||||||||||| |||||| |||| || ||||||||||||||| ||||  ||||||||||||||||||||    
T  27850924 tgggtgagggcttgatgctctataatgtatatttgtacatagtacgtgaggggagagggcttgatgctctatgagcctatttacgctcaata 27850833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 217
Target Start/End: Complemental strand, 18319620 - 18319538
Alignment:
Q  135 taatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||||||||||||||||| | ||||||||||||||| ||||  |||||||||||||||||||| | || |||||||    
T  18319620 taatgtatatttatacataatacgcaaagggagagggcttgatgctcttggagcctatttacgctcaatatgttgagggcttg 18319538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 17743044 - 17742994
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| ||||  |||||||||||||||||||||| ||||||||||    
T  17743044 gagggcttgatgctctaggagcctatttacgctcaatacgttgggggcttg 17742994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 1595385 - 1595334
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctc-aatacgatgggggcttg 217  Q
    ||||||||||| | |||||||||||||||||||| |||||| ||||||||||    
T  1595385 gagggcttgatgccctgagagcctatttacgctcaaatacgttgggggcttg 1595334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 16133733 - 16133783
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||| ||||||||| ||||||||||    
T  16133733 gagggcttgatgccctgtgagcctatttactctcaatacgttgggggcttg 16133783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 18708455 - 18708405
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    |||| |||||| ||||| |||||||||||||||||||||| || |||||||    
T  18708455 gaggtcttgatgctctgtgagcctatttacgctcaatacgttgagggcttg 18708405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 19444343 - 19444393
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||| ||||||||| ||||||||||    
T  19444343 gagggcttgatgccctgtgagcctatttacactcaatacgttgggggcttg 19444393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 23017252 - 23017302
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| | ||| |||||||||||||||||||||| ||||||||||    
T  23017252 gagggtttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 23017302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 27573394 - 27573426
Alignment:
Q  185 gagcctatttacgctcaatacgatgggggcttg 217  Q
    |||||||||||||||||||||| ||||||||||    
T  27573394 gagcctatttacgctcaatacgttgggggcttg 27573426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 31733685 - 31733653
Alignment:
Q  185 gagcctatttacgctcaatacgatgggggcttg 217  Q
    |||||||||||||||||||||| ||||||||||    
T  31733685 gagcctatttacgctcaatacgttgggggcttg 31733653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 159; Significance: 8e-85; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 15 - 217
Target Start/End: Original strand, 79429 - 79631
Alignment:
Q  15 agatgaaggatgatgttccaatttattggatttgcattaagaagtcgatgttctaaaatgttaagaagttgagtccattgcatacgcataatacgagatg 114  Q
    ||||||||||| |||||||||||||||||||| | | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||    
T  79429 agatgaaggataatgttccaatttattggattagtaataagaagtcgatgttataaaatgttaagaagttgagtccattgcatacgcataatacatgatg 79528  T
Q  115 ggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaatacgatgggggc 214  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||    
T  79529 gtagagagcttgatgctctgtaatgtatatttatacataatacgcgatggtagagggcttgatgctctgagagcctatttacgctcaataagatgggggc 79628  T
Q  215 ttg 217  Q
    |||    
T  79629 ttg 79631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 159; Significance: 8e-85; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 23 - 217
Target Start/End: Original strand, 32452038 - 32452232
Alignment:
Q  23 gatgatgttccaatttattggatttgcattaagaagtcgatgttctaaaatgttaagaagttgagtccattgcatacgcataatacgagatgggagagag 122  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  32452038 gatgatgttccaatttattggatttgtattaagaagtcgatgttctaaaatgttaaggagttgagtccattgcatacgcataatacgagatggtagagag 32452137  T
Q  123 cttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    |||||||||||||||||||||||||||||||| |  |||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  32452138 cttgatgctctgtaatgtatatttatacataaaaaacgatggtagagggattgatgctctgagagcctatttacgctcaatacgatgggggcttg 32452232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 5032461 - 5032511
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  5032461 gagggcttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 5032511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 9974880 - 9974830
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  9974880 gagggcttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 9974830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 19202301 - 19202351
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  19202301 gagggcttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 19202351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 22689635 - 22689585
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  22689635 gagggcttgattccctgtgagcctatttacgctcaatacgttgggggcttg 22689585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 22694231 - 22694181
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  22694231 gagggcttgattccctgtgagcctatttacgctcaatacgttgggggcttg 22694181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 24436008 - 24435958
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  24436008 gagggcttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 24435958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 216
Target Start/End: Complemental strand, 6576189 - 6576142
Alignment:
Q  169 gggcttgatactctgagagcctatttacgctcaatacgatgggggctt 216  Q
    ||||||||| | ||| |||||||||||||||||||||| |||||||||    
T  6576189 gggcttgatgccctgggagcctatttacgctcaatacgttgggggctt 6576142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 6478347 - 6478397
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| | ||| |||||||||||||||||||||| ||||||||||    
T  6478347 gagggtttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 6478397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 24781960 - 24782010
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| || |||||||    
T  24781960 gagggcttgatgccctgtgagcctatttacgctcaatacgttgagggcttg 24782010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 22413239 - 22413315
Alignment:
Q  15 agatgaaggatgatgttccaatttattggatttgcattaagaagtcgatgttctaaaatgttaagaagttgagtccat 92  Q
    ||||||| ||||||||||||| |||||||||||  | ||||| ||| ||||| ||| ||||||||  |||||||||||    
T  22413239 agatgaaagatgatgttccaaattattggatttata-taagaggtcaatgttttaagatgttaagttgttgagtccat 22413315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 7672482 - 7672518
Alignment:
Q  122 gcttgatgctctgtaatgtatatttatacataatacg 158  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  7672482 gcttgatgccctgtaatgtatatttatacatattacg 7672518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 155; Significance: 2e-82; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 15 - 205
Target Start/End: Original strand, 19801526 - 19801716
Alignment:
Q  15 agatgaaggatgatgttccaatttattggatttgcattaagaagtcgatgttctaaaatgttaagaagttgagtccattgcatacgcataatacgagatg 114  Q
    ||||||||||||||||||||| ||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19801526 agatgaaggatgatgttccaacttatttgatttgtgttaagaagtcgatgttctaaaatgttaagaagttgagtccattgcatacgcataatacgagatg 19801625  T
Q  115 ggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaatac 205  Q
    | |||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  19801626 gtagagagcttgatgctctgtattgtatctttatacataatacgcgatggtagagggcttgatgctctgagagcctatttacgctcaatac 19801716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 73 - 217
Target Start/End: Original strand, 38550328 - 38550469
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||||||| ||||||||||||||||||  ||  ||||   |||| ||| ||||||||||||||||||||||||||||||||||| | || ||||||||||    
T  38550328 tgttaagatgttgagtccattgcatacttatt-tacgt--tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaagggagagggc 38550424  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| |||||||||||||||||||| | ||||||||||    
T  38550425 ttgatgctctgtgagcctatttacgctcaatatgttgggggcttg 38550469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 73 - 212
Target Start/End: Complemental strand, 39833769 - 39833633
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||||||| |||||||||||||||||| |||  ||||   |||| ||  ||||||||||||||||||||||||||||||||||| | || ||||||||||    
T  39833769 tgttaagatgttgagtccattgcatactcatt-tacgt--tgggtgatggcttgatgctctgtaatgtatatttatacataatatgagaagggagagggc 39833673  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatgggg 212  Q
    ||||| ||||| |||||||||||||||||||||| |||||    
T  39833672 ttgatgctctgtgagcctatttacgctcaatacgttgggg 39833633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 73 - 213
Target Start/End: Original strand, 20982962 - 20983099
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||||||| |||||||||||||||||| |||  ||||   |||| || |||||||||||||||||||||||||||||||||||| | || |||||||||     
T  20982962 tgttaagatgttgagtccattgcatactcatt-tacgt--tgggtgaaagcttgatgctctgtaatgtatatttatacataatatgtgaagggagagggg 20983058  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatggggg 213  Q
    |||||  |||| |||||||||||||||||||| | ||||||    
T  20983059 ttgatgttctgtgagcctatttacgctcaatatgttggggg 20983099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 73 - 217
Target Start/End: Original strand, 27472625 - 27472766
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||||||| |||||||| ||||||||| |||  ||||   |||| ||| ||||||||||||||||| ||||||||||||||||| | || ||||||||||    
T  27472625 tgttaagatgttgagtctattgcatactcatt-tacgt--tgggtgagggcttgatgctctgtaatatatatttatacataatatgtgaagggagagggc 27472721  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| |||||||||||| ||||||| | ||||||||||    
T  27472722 ttgatgctctgtgagcctatttacactcaatatgttgggggcttg 27472766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 124 - 217
Target Start/End: Original strand, 13428427 - 13428520
Alignment:
Q  124 ttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||||||||||||||||||||||||| | || |||| ||| |||||| ||||| |||||||||||||||||||| | ||||||||||    
T  13428427 ttgatgctctgtaatgtatatttatacataatatgtgaagggaaaggacttgatgctctgtgagcctatttacgctcaatatgttgggggcttg 13428520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 1323458 - 1323555
Alignment:
Q  122 gcttgatgctctgtaatgtatatttatacataatacgcgatgg--gagagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||||||||||||||||||||||||||| | || ||  |||||||||||||  |||| |||| ||||||||||||||| | ||||||||||    
T  1323458 gcttgatgctctgtaatgtatatttatacataatatgtgaagggagagagggcttgatgatctgtgagcttatttacgctcaatatgttgggggcttg 1323555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 19801719 - 19801769
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  19801719 gagggcttgatgttctgagagcctatttacgctcaatacgatgggggcttg 19801769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 24713176 - 24713126
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||||||    
T  24713176 gagggcttgataccctgtgagcctatttacgctcaatacgttgggggcttg 24713126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 39937107 - 39937157
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  39937107 gagggcttgatgccctgcgagcctatttacgctcaatacgttgggggcttg 39937157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 153
Target Start/End: Complemental strand, 24713238 - 24713207
Alignment:
Q  122 gcttgatgctctgtaatgtatatttatacata 153  Q
    ||||||||||||||||||||||||||||||||    
T  24713238 gcttgatgctctgtaatgtatatttatacata 24713207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 18833283 - 18833233
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||| | ||||||||||    
T  18833283 gagggcttgatgccctgggagcctatttacgctcaatatgttgggggcttg 18833233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 19127946 - 19127896
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    |||||||||||||  || ||||||||||||||||||||||  |||||||||    
T  19127946 gagggcttgataccatgtgagcctatttacgctcaatacgtcgggggcttg 19127896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 151; Significance: 5e-80; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 15 - 177
Target Start/End: Original strand, 12756816 - 12756978
Alignment:
Q  15 agatgaaggatgatgttccaatttattggatttgcattaagaagtcgatgttctaaaatgttaagaagttgagtccattgcatacgcataatacgagatg 114  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12756816 agatgaaggatgatgttccaatttattggatttgtattaagaagtcgatgttctaaaatgctaagaagttgagtccattgcatacgcataatacgagatg 12756915  T
Q  115 ggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgat 177  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  12756916 ggagagagcttgatgctctgtattgtatatttatacataatacgcgatgggagagggcttgat 12756978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 73 - 217
Target Start/End: Original strand, 37727874 - 37728015
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||||||| |||||||||||||||||| |||  ||||   |||| ||||||||||||||||||||||||||||||||||||||| | || |||||||||     
T  37727874 tgttaagatgttgagtccattgcatactcatt-tacgt--tgggtgagagcttgatgctctgtaatgtatatttatacataatatgtgaagggagagggt 37727970  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||  |||||||||||||||||||||| ||||||||||    
T  37727971 ttgatgctctttgagcctatttacgctcaatacgttgggggcttg 37728015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 73 - 217
Target Start/End: Original strand, 9390033 - 9390174
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    ||||||||  ||||||||||||||||| |||  ||||   |||| ||| ||||||||||||||||||||||||||||||||||| | || ||||||||||    
T  9390033 tgttaagatattgagtccattgcatactcatt-tacgt--tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaagggagagggc 9390129  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| |||||||||||||||||||| | ||||||||||    
T  9390130 ttgatgctctgtgagcctatttacgctcaatatgttgggggcttg 9390174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 73 - 217
Target Start/End: Complemental strand, 17232413 - 17232272
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||||||| |||||||||||||||||| |||  ||||   |||| ||| |||||||||| |||||||||||||||||||||||| | || ||||||||||    
T  17232413 tgttaagatgttgagtccattgcatactcatt-tacgt--tgggtgagggcttgatgctatgtaatgtatatttatacataatatgtgaagggagagggc 17232317  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| |||||||||||||||||||| | ||||||||||    
T  17232316 ttgatgctctgtgagcctatttacgctcaatatgttgggggcttg 17232272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 73 - 217
Target Start/End: Original strand, 6170439 - 6170580
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||||||| |||||||||||||||||| |||  ||||   |||| ||| |||||||||||| |||||||||||||||||||||| | || ||||||||||    
T  6170439 tgttaagatgttgagtccattgcatactcatt-tacgt--tgggtgagggcttgatgctctataatgtatatttatacataatatgtgaagggagagggc 6170535  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||  |||||||||||||||||||||| ||||| ||||    
T  6170536 ttgatgctctatgagcctatttacgctcaatacgttggggacttg 6170580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 73 - 217
Target Start/End: Original strand, 45847960 - 45848101
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||||||| | |||||||||||||||| |||  ||||   |||| ||| ||||||||||||||||||||||||||||||||||| | || ||  ||||||    
T  45847960 tgttaagatgctgagtccattgcatactcatt-tacgt--tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaaggttgagggc 45848056  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| |||||||||||||||||||| | ||||||||||    
T  45848057 ttgatgctctgtgagcctatttacgctcaatatgttgggggcttg 45848101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 14270435 - 14270512
Alignment:
Q  140 tatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||||||||| | || ||||||||||||||| ||||| |||||||||||||||||||| | ||||||||||    
T  14270435 tatatttatacataatatgtgaagggagagggcttgatgctctgtgagcctatttacgctcaatatgttgggggcttg 14270512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 1543467 - 1543530
Alignment:
Q  141 atatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaata 204  Q
    |||||||||||||||||| |||||||||||||||||| ||||  ||||||||||||||||||||    
T  1543467 atatttatacataatacgagatgggagagggcttgatgctctaggagcctatttacgctcaata 1543530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 8468191 - 8468136
Alignment:
Q  162 tgggagagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    |||| ||||||||||| ||||| |||||||||||||||||||| | ||||||||||    
T  8468191 tgggtgagggcttgatgctctgtgagcctatttacgctcaatatgttgggggcttg 8468136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 8852262 - 8852312
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  8852262 gagggcttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 8852312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 32300956 - 32300906
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  32300956 gagggcttgatgccctgggagcctatttacgctcaatacgttgggggcttg 32300906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 38227339 - 38227289
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  38227339 gagggcttgatgccctgggagcctatttacgctcaatacgttgggggcttg 38227289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 11066380 - 11066331
Alignment:
Q  168 agggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    |||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  11066380 agggcttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 11066331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 12371257 - 12371207
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| ||||||||||| |||||||||| ||||||||||    
T  12371257 gagggcttgatgccctgtgagcctatttatgctcaatacgttgggggcttg 12371207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 12371299 - 12371249
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| || |||||||    
T  12371299 gagggcttgatgccctgtgagcctatttacgctcaatacgttgagggcttg 12371249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 13150675 - 13150725
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||| ||||||    
T  13150675 gagggcttgatgccctgtgagcctatttacgctcaatacgttggaggcttg 13150725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 20619198 - 20619148
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||  |||||||||||||||||||||| ||||||||||    
T  20619198 gagggcttgatgccctatgagcctatttacgctcaatacgttgggggcttg 20619148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 20619240 - 20619190
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| || |||||||    
T  20619240 gagggcttgatgccctgtgagcctatttacgctcaatacgttgagggcttg 20619190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 167 - 212
Target Start/End: Original strand, 18075582 - 18075627
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggg 212  Q
    ||||||||||| | ||| |||||||||||||||||||||| |||||    
T  18075582 gagggcttgatgccctgtgagcctatttacgctcaatacgttgggg 18075627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 133
Target Start/End: Original strand, 1543476 - 1543508
Alignment:
Q  101 cataatacgagatgggagagagcttgatgctct 133  Q
    |||||||||||||||||||| ||||||||||||    
T  1543476 cataatacgagatgggagagggcttgatgctct 1543508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 133; Significance: 2e-69; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 15 - 183
Target Start/End: Original strand, 20523 - 20691
Alignment:
Q  15 agatgaaggatgatgttccaatttattggatttgcattaagaagtcgatgttctaaaatgttaagaagttgagtccattgcatacgcataatacgagatg 114  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20523 agatgaaggatgatgttccaacttattggatttgtattaagaagtcgatgttctaaaatgttaagaagttgagtccattgcatacgcataatacgagatg 20622  T
Q  115 ggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctg 183  Q
    | ||||||||||||||||| ||||||||||||||||||||||| |||||| |||| | ||||| |||||    
T  20623 gtagagagcttgatgctctataatgtatatttatacataatacacgatggcagagaggttgatgctctg 20691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 101 - 217
Target Start/End: Original strand, 20658 - 20774
Alignment:
Q  101 cataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctc 200  Q
    ||||||||  ||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||    
T  20658 cataatacacgatggcagagaggttgatgctctgtaatgtatatttatacataatacgcgatggtagagggcttgatgctctaagagcctatttacgctc 20757  T
Q  201 aatacgatgggggcttg 217  Q
    |||||||||||||||||    
T  20758 aatacgatgggggcttg 20774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 73 - 204
Target Start/End: Complemental strand, 4647 - 4516
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4647 tgttaagatgttgagtccattgcatactcataatacgagatgggagagggcttgatgctctgtaatgtatatttatacataatacgagatgggagagggc 4548  T
Q  173 ttgatactctgagagcctatttacgctcaata 204  Q
    || || ||||||||||||||||||||||||||    
T  4547 ttaatgctctgagagcctatttacgctcaata 4516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 73 - 204
Target Start/End: Original strand, 8669 - 8800
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    ||||| || |||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||| |||| | |||||||||| ||    
T  8669 tgttaggatgttgagtccattgcatactcataatacgagatgggggagggcttgatgctctgtaatgtatatttatacacaatatgagatgggagagagc 8768  T
Q  173 ttgatactctgagagcctatttacgctcaata 204  Q
    ||||| ||||| ||||||||||||||||||||    
T  8769 ttgatgctctgggagcctatttacgctcaata 8800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 102 - 204
Target Start/End: Complemental strand, 9803 - 9701
Alignment:
Q  102 ataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctca 201  Q
    |||||||| |||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  9803 ataatacgtgatgggagagggcttgatgctctgtaatgaatatttatacataatacgagatgggagagggcttgatgctctgagagcctatttacgctca 9704  T
Q  202 ata 204  Q
    |||    
T  9703 ata 9701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 101 - 134
Target Start/End: Complemental strand, 9755 - 9722
Alignment:
Q  101 cataatacgagatgggagagagcttgatgctctg 134  Q
    |||||||||||||||||||| |||||||||||||    
T  9755 cataatacgagatgggagagggcttgatgctctg 9722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 73 - 204
Target Start/End: Complemental strand, 13311 - 13180
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    ||||| || |||||||||||||||||  ||||||| |||||||| ||| |||||||||||||||||||||||||||||| |||  | |||||||||||||    
T  13311 tgttaggatgttgagtccattgcatattcataatatgagatgggggagggcttgatgctctgtaatgtatatttatacacaatctgagatgggagagggc 13212  T
Q  173 ttgatactctgagagcctatttacgctcaata 204  Q
    ||||| ||||| ||||||||||||||||||||    
T  13211 ttgatgctctgggagcctatttacgctcaata 13180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 73 - 204
Target Start/End: Complemental strand, 25012 - 24882
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    ||||| || ||||||||||||||| |  ||||||  |||||||| ||  |||||||||||||||||||||||| ||||| |||  | |||||||||||||    
T  25012 tgttaggatgttgagtccattgcacattcataatctgagatgggggacggcttgatgctctgtaatgtatatt-atacacaatctgagatgggagagggc 24914  T
Q  173 ttgatactctgagagcctatttacgctcaata 204  Q
    ||||| ||||| ||||||||||||||||||||    
T  24913 ttgatgctctgggagcctatttacgctcaata 24882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 73 - 204
Target Start/End: Complemental strand, 34898 - 34767
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    ||||| || |||||||||||||||||  |||||||||||||||| ||| |||||||||||||||||||||||||||||| |||  | |||||||||||||    
T  34898 tgttaggatgttgagtccattgcatattcataatacgagatgggggagggcttgatgctctgtaatgtatatttatacacaatctgagatgggagagggc 34799  T
Q  173 ttgatactctgagagcctatttacgctcaata 204  Q
    ||||| ||||| ||||||||||| ||||||||    
T  34798 ttgatgctctgggagcctatttatgctcaata 34767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 73 - 217
Target Start/End: Complemental strand, 43542902 - 43542761
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||||||| |||||||||||||||||| |||  ||||   |||| ||||||||||||||||||||||||||||||||||||||| | || ||||||||||    
T  43542902 tgttaagatgttgagtccattgcatactcatt-tacgt--tgggtgagagcttgatgctctgtaatgtatatttatacataatatgtgaagggagagggc 43542806  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| || ||||||||||||||||||| ||||||||||    
T  43542805 ttgatgctctgtgaccctatttacgctcaatacgttgggggcttg 43542761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 73 - 217
Target Start/End: Original strand, 28194786 - 28194927
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||| ||| |||||||||||||||||| |||  ||||   |||| ||| ||||||||||||||||||||||||||||||||||| | || ||||||||||    
T  28194786 tgtttagatgttgagtccattgcatactcatt-tacgt--tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaagggagagggc 28194882  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| |||||||||||||||||||||| ||||||||||    
T  28194883 ttgatgctctgtgagcctatttacgctcaatacgttgggggcttg 28194927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 73 - 217
Target Start/End: Original strand, 41305924 - 41306065
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||||||| |||||||||||||||||| |||  ||||   |||| ||| ||||||||||||||||||||||||||||||||||| | || ||||||||||    
T  41305924 tgttaagatgttgagtccattgcatactcatt-tacgt--tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaagggagagggc 41306020  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| |||||||||||||||||||| | ||||||||||    
T  41306021 ttgatgctctgtgagcctatttacgctcaatatgttgggggcttg 41306065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 73 - 217
Target Start/End: Original strand, 35982016 - 35982157
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||||||| |||||||||||||||||| |||  ||||   |||| ||| ||||||||||||||||||| ||||||||||||||| | || ||||||||||    
T  35982016 tgttaagatgttgagtccattgcatactcatt-tacgt--tgggtgagggcttgatgctctgtaatgtttatttatacataatatgtgaagggagagggc 35982112  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| |||||||||||||||||||| | ||||||||||    
T  35982113 ttgatgctctgtgagcctatttacgctcaatatgttgggggcttg 35982157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 74 - 217
Target Start/End: Complemental strand, 20636688 - 20636548
Alignment:
Q  74 gttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggct 173  Q
    ||||||| |||||||||||||||||| |||  ||||   |||| ||| ||||||||||||||||||||||||||| ||||||| | || |||||||||||    
T  20636688 gttaagatgttgagtccattgcatactcatt-tacgt--tgggtgagggcttgatgctctgtaatgtatatttatccataatatgtgaagggagagggct 20636592  T
Q  174 tgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    |||| ||||| ||||||||||| |||||||||| ||||||||||    
T  20636591 tgatgctctgtgagcctatttatgctcaatacgttgggggcttg 20636548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 43697110 - 43697017
Alignment:
Q  124 ttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||||||||||||||||||||||||| | || ||||||||||||||| ||||  ||| |||||||||||||||||| ||||||||||    
T  43697110 ttgatgctctgtaatgtatatttatacataatatgtgaagggagagggcttgatgctctatgagtctatttacgctcaatacgttgggggcttg 43697017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 124 - 217
Target Start/End: Original strand, 46382940 - 46383033
Alignment:
Q  124 ttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||||||||||||||||||||||||| | || ||||||||| ||||| ||||| ||||||||||||| |||||| | ||||||||||    
T  46382940 ttgatgctctgtaatgtatatttatacataatatgtgaagggagagggtttgatgctctgtgagcctatttacgttcaatatgttgggggcttg 46383033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 431594 - 431544
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  431594 gagggcttgatgccctgggagcctatttacgctcaatacgttgggggcttg 431544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 35088430 - 35088380
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  35088430 gagggcttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 35088380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 16368387 - 16368463
Alignment:
Q  15 agatgaaggatgatgttccaatttattggatttgcattaagaagtcgatgttctaaaatgttaagaagttgagtccat 92  Q
    ||||||| ||||||||||||| |||||||||||  | ||||| ||||||||||||| ||| ||||  |||||||||||    
T  16368387 agatgaatgatgatgttccaaattattggatttata-taagaggtcgatgttctaagatgctaagttgttgagtccat 16368463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 50686631 - 50686555
Alignment:
Q  15 agatgaaggatgatgttccaatttattggatttgcattaagaagtcgatgttctaaaatgttaagaagttgagtccat 92  Q
    ||||||| |||| |||||||| |||||||||||  || |||| ||||||||||||| ||||||||  |||||||||||    
T  50686631 agatgaaagatgttgttccaaattattggatttatat-aagaggtcgatgttctaagatgttaagttgttgagtccat 50686555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 153
Target Start/End: Complemental strand, 35088534 - 35088503
Alignment:
Q  122 gcttgatgctctgtaatgtatatttatacata 153  Q
    ||||||||||||||||||||||||||||||||    
T  35088534 gcttgatgctctgtaatgtatatttatacata 35088503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 41227790 - 41227840
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| |  || |||||||||||||||||||||| ||||||||||    
T  41227790 gagggcttgatgccatgtgagcctatttacgctcaatacgttgggggcttg 41227840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 20587684 - 20587635
Alignment:
Q  168 agggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    |||||||||| | ||| |||||||||||||||||||||| || |||||||    
T  20587684 agggcttgatgccctgtgagcctatttacgctcaatacgttgagggcttg 20587635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 20592222 - 20592173
Alignment:
Q  168 agggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    |||||||||| | ||| |||||||||||||||||||||| || |||||||    
T  20592222 agggcttgatgccctgtgagcctatttacgctcaatacgttgagggcttg 20592173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 20634671 - 20634720
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggctt 216  Q
    |||||||||||   ||| |||||||||||||||||||||| |||||||||    
T  20634671 gagggcttgatgtcctgtgagcctatttacgctcaatacgttgggggctt 20634720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 41050137 - 41050169
Alignment:
Q  15 agatgaaggatgatgttccaatttattggattt 47  Q
    ||||||||||||||||||||| |||||||||||    
T  41050137 agatgaaggatgatgttccaaattattggattt 41050169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 48300800 - 48300768
Alignment:
Q  185 gagcctatttacgctcaatacgatgggggcttg 217  Q
    |||||||||||||||||||||| ||||||||||    
T  48300800 gagcctatttacgctcaatacgttgggggcttg 48300768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 73 - 217
Target Start/End: Original strand, 44121 - 44262
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||||||| |||||||||||||||||| |||  ||||   |||| ||| ||||||||||||||||||||||||||||||||||| | || ||||||||||    
T  44121 tgttaagatgttgagtccattgcatactcatt-tacgt--tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaagggagagggc 44217  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| |||||||||||||||||||| | ||||||||||    
T  44218 ttgatgctctgtgagcctatttacgctcaatatgttgggggcttg 44262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 4e-34; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 73 - 217
Target Start/End: Original strand, 5889496 - 5889637
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||||||| |||||||||||||||||| |||  ||||   |||| ||| ||||||||||||||||||||||||||||||||||| | ||  |||||||||    
T  5889496 tgttaagatgttgagtccattgcatactcatt-tacgt--tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaaaggagagggc 5889592  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| |||||||||||||||||||||| ||||||||||    
T  5889593 ttgatgctctgtgagcctatttacgctcaatacgttgggggcttg 5889637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 68 - 217
Target Start/End: Original strand, 21741873 - 21742019
Alignment:
Q  68 taaaatgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggag 167  Q
    |||| |||||||| |||||||||||||||||| |||  ||||   |||| ||| ||||||||||||||||||||||||||||||||||| | ||  ||||    
T  21741873 taaattgttaagatgttgagtccattgcatactcatt-tacgt--tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaaaggag 21741969  T
Q  168 agggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    |||| ||||| ||||| |||||||||||||||||||||| || |||||||    
T  21741970 agggtttgatgctctgtgagcctatttacgctcaatacgttgagggcttg 21742019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 29915436 - 29915494
Alignment:
Q  159 cgatgggagagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||| ||||||||||| ||||| |||||||||||||||||||| | | ||||||||    
T  29915436 cgatgggcgagggcttgatgctctgtgagcctatttacgctcaataagttcggggcttg 29915494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 21309063 - 21309109
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatggggg 213  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||    
T  21309063 gagggcttgatgccctgtgagcctatttacgctcaatacgttggggg 21309109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 19920652 - 19920620
Alignment:
Q  185 gagcctatttacgctcaatacgatgggggcttg 217  Q
    |||||||||||||||||||||| ||||||||||    
T  19920652 gagcctatttacgctcaatacgttgggggcttg 19920620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 113 - 217
Target Start/End: Complemental strand, 2792 - 2688
Alignment:
Q  113 tgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaatacgatgggg 212  Q
    |||| ||| ||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  2792 tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgaagggagagggcttgatactctgtgagcctatttgcgctcaatacgttgggg 2693  T
Q  213 gcttg 217  Q
    |||||    
T  2692 gcttg 2688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 73 - 204
Target Start/End: Complemental strand, 74600 - 74469
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    ||||| || |||||||||||||||||  |||||||||||||||| ||| | |||||||||||||||||||||||||||| |||  | |||||||||||||    
T  74600 tgttaggatgttgagtccattgcatattcataatacgagatgggggagggtttgatgctctgtaatgtatatttatacacaatctgagatgggagagggc 74501  T
Q  173 ttgatactctgagagcctatttacgctcaata 204  Q
    |||||  |||| ||| ||||||| ||||||||    
T  74500 ttgatgttctgggagtctatttatgctcaata 74469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 73 - 217
Target Start/End: Complemental strand, 179 - 39
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||||||| |||||||||||||||||| |||  ||||   |||| ||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  179 tgttaagatgttgagtccattgcatactcatt-tacgt--tgggtgag-gcttgacgctctgtaatgtatatttatacataatacgcgaagggagagggc 84  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||  |||||||||||||||||||| | || |||||||    
T  83 ttgatgctcttggagcctatttacgctcaatatgttgagggcttg 39  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 66; Significance: 2e-29; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 73 - 217
Target Start/End: Original strand, 20790 - 20931
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||||||| |||||||||||||||||| |||  ||||   |||| ||| |||||||||||| ||||||||||||||||||||||||| | ||||||||||    
T  20790 tgttaagatgttgagtccattgcatactcatt-tacgt--tgggtgagggcttgatgctctataatgtatatttatacataatacgcaaagggagagggc 20886  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||  |||||||||||||||||||| | || |||||||    
T  20887 ttgatgctcttggagcctatttacgctcaatatgttgagggcttg 20931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 73 - 217
Target Start/End: Original strand, 23721 - 23861
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||||||| |||||||||||||||||| |||  ||||   |||| ||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  23721 tgttaagatgttgagtccattgcatactcatt-tacgt--tgggtgag-gcttgacgctctgtaatgtatatttatacataatacgcgaagggagagggc 23816  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||  |||||||||||||||||||| | || |||||||    
T  23817 ttgatgctcttggagcctatttacgctcaatatgttgagggcttg 23861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 113 - 204
Target Start/End: Original strand, 47049 - 47140
Alignment:
Q  113 tgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggcttgatactctgagagcctatttacgctcaata 204  Q
    |||| ||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||  |||| ||||||||||||||||||||    
T  47049 tgggtgagggcttgatgctctgtaatgtatatttatacataatatgtgatgggagagggcttgatgttctgtgagcctatttacgctcaata 47140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 73 - 217
Target Start/End: Complemental strand, 106349 - 106208
Alignment:
Q  73 tgttaagaagttgagtccattgcatacgcataatacgagatgggagagagcttgatgctctgtaatgtatatttatacataatacgcgatgggagagggc 172  Q
    |||||||| |||||||||||||||||| |||  ||||  |  || ||||| ||||||||||||||||||||||||||||||||| | || ||||||| ||    
T  106349 tgttaagatgttgagtccattgcatactcatt-tacgtta--ggtgagagtttgatgctctgtaatgtatatttatacataatatgtgaagggagagagc 106253  T
Q  173 ttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||  |||||||||||||||||||| | ||||||||||    
T  106252 ttgatgctctatgagcctatttacgctcaatatgttgggggcttg 106208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 57755 - 57705
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  57755 gagggcttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 57705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 78041 - 77991
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  78041 gagggcttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 77991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 78449 - 78499
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  78449 gagggcttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 78499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 6786 - 6835
Alignment:
Q  168 agggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    |||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  6786 agggcttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 6835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 1899 - 1931
Alignment:
Q  15 agatgaaggatgatgttccaatttattggattt 47  Q
    ||||||||||||||||||||| |||||||||||    
T  1899 agatgaaggatgatgttccaaattattggattt 1931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 60817 - 60880
Alignment:
Q  15 agatgaaggatgatgttccaatttattggatttgcattaagaagtcgatgttctaaaatgttaag 79  Q
    ||||||| ||||||||||||| |||||||||||  | ||||| ||||||||||||| ||||||||    
T  60817 agatgaaagatgatgttccaaattattggatttata-taagaggtcgatgttctaagatgttaag 60880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 153
Target Start/End: Complemental strand, 1433 - 1402
Alignment:
Q  122 gcttgatgctctgtaatgtatatttatacata 153  Q
    ||||||||||||||||||||||||||||||||    
T  1433 gcttgatgctctgtaatgtatatttatacata 1402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 153
Target Start/End: Complemental strand, 76768 - 76737
Alignment:
Q  122 gcttgatgctctgtaatgtatatttatacata 153  Q
    ||||||||||||||||||||||||||||||||    
T  76768 gcttgatgctctgtaatgtatatttatacata 76737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 2936 - 2986
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||  |||||||||||||||||||||| ||||||||||    
T  2936 gagggcttgatgccctatgagcctatttacgctcaatacgttgggggcttg 2986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 3025 - 3071
Alignment:
Q  171 gcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  3025 gcttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 3071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 13638 - 13588
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||| ||||||||||||||| ||||||||||    
T  13638 gagggcttgatgccctgtgagcctttttacgctcaatacgttgggggcttg 13588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 9399 - 9449
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| || |||||||    
T  9399 gagggcttgatgccctgtgagcctatttacgctcaatacgttgagggcttg 9449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 9441 - 9491
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | |||  ||||||||||||||||||||| ||||||||||    
T  9441 gagggcttgatgccctgtaagcctatttacgctcaatacgttgggggcttg 9491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 2838 - 2788
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||| | ||||||||||    
T  2838 gagggcttgatgccctgtgagcctatttacgctcaatatgttgggggcttg 2788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 698 - 748
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| ||||||||||| |||||||||| ||||||||||    
T  698 gagggcttgatgccctgtgagcctatttatgctcaatacgttgggggcttg 748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 153
Target Start/End: Original strand, 10258 - 10292
Alignment:
Q  119 agagcttgatgctctgtaatgtatatttatacata 153  Q
    |||||||||||| ||||||||||||||||||||||    
T  10258 agagcttgatgccctgtaatgtatatttatacata 10292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Original strand, 41286 - 41336
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||| ||||| | ||| |||||||||||||||||||||| ||||||||||    
T  41286 gagggtttgatgccctgtgagcctatttacgctcaatacgttgggggcttg 41336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 7269 - 7219
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| || |||||||    
T  7269 gagggcttgatgccctgtgagcctatttacgctcaatacgttgtgggcttg 7219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 14388 - 14338
Alignment:
Q  167 gagggcttgatactctgagagcctatttacgctcaatacgatgggggcttg 217  Q
    ||||||||||| | ||| |||||||||||||||||||||| || |||||||    
T  14388 gagggcttgatgccctgtgagcctatttacgctcaatacgttgtgggcttg 14338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 570 - 494
Alignment:
Q  15 agatgaaggatgatgttccaatttattggatttgcattaagaagtcgatgttctaaaatgttaagaagttgagtccat 92  Q
    |||||||  |||||||||||| |||||||||||  || |||| ||||||||||||| ||| ||||  |||||||||||    
T  570 agatgaattatgatgttccaaattattggatttatat-aagaggtcgatgttctaagatgctaagttgttgagtccat 494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 9915 - 9947
Alignment:
Q  185 gagcctatttacgctcaatacgatgggggcttg 217  Q
    |||||||||||||||||||||| ||||||||||    
T  9915 gagcctatttacgctcaatacgttgggggcttg 9947  T

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