View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8810A_low_96 (Length: 323)

Name: NF8810A_low_96
Description: NF8810A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8810A_low_96
NF8810A_low_96
[»] chr1 (50 HSPs)
chr1 (7-321)||(4955999-4956292)
chr1 (6-113)||(22077551-22077658)
chr1 (6-83)||(22077166-22077243)
chr1 (6-115)||(22077885-22077993)
chr1 (6-86)||(44290514-44290594)
chr1 (6-113)||(5320021-5320128)
chr1 (6-86)||(3550742-3550822)
chr1 (6-113)||(66528-66635)
chr1 (6-113)||(3875387-3875494)
chr1 (6-113)||(24600370-24600477)
chr1 (7-86)||(44290882-44290961)
chr1 (2-87)||(5528806-5528891)
chr1 (6-86)||(17294599-17294679)
chr1 (6-86)||(26661578-26661658)
chr1 (6-86)||(50052079-50052159)
chr1 (6-85)||(32594772-32594851)
chr1 (6-113)||(34364502-34364609)
chr1 (6-113)||(34364920-34365027)
chr1 (6-113)||(39066256-39066363)
chr1 (6-81)||(41157018-41157093)
chr1 (14-113)||(41184489-41184588)
chr1 (6-87)||(66143-66225)
chr1 (2-84)||(24132038-24132119)
chr1 (6-86)||(37556133-37556213)
chr1 (6-113)||(31767217-31767324)
chr1 (6-85)||(40082430-40082508)
chr1 (7-86)||(41142394-41142473)
chr1 (6-85)||(48588544-48588623)
chr1 (7-113)||(1188645-1188751)
chr1 (31-113)||(21378122-21378204)
chr1 (6-87)||(30630694-30630775)
chr1 (6-86)||(3537655-3537735)
chr1 (14-113)||(44685451-44685551)
chr1 (31-86)||(3537228-3537283)
chr1 (6-85)||(29798222-29798301)
chr1 (6-113)||(41157370-41157477)
chr1 (6-95)||(14318880-14318969)
chr1 (33-86)||(45084404-45084457)
chr1 (6-86)||(41759505-41759585)
chr1 (39-82)||(5575130-5575173)
chr1 (6-74)||(9955942-9956011)
chr1 (6-71)||(26661954-26662019)
chr1 (6-86)||(11977302-11977382)
chr1 (6-86)||(38804411-38804491)
chr1 (6-113)||(19283511-19283618)
chr1 (31-113)||(37850681-37850763)
chr1 (1-86)||(34649460-34649545)
chr1 (6-71)||(44043828-44043893)
chr1 (26-114)||(1187440-1187528)
chr1 (25-113)||(24448272-24448360)
[»] chr4 (63 HSPs)
chr4 (6-113)||(3244505-3244612)
chr4 (6-113)||(25483331-25483438)
chr4 (6-86)||(36629259-36629339)
chr4 (6-86)||(44621024-44621104)
chr4 (6-113)||(4955371-4955478)
chr4 (6-85)||(55933178-55933257)
chr4 (6-86)||(34646703-34646783)
chr4 (6-86)||(54108935-54109014)
chr4 (6-113)||(10245915-10246021)
chr4 (6-85)||(32941177-32941256)
chr4 (6-85)||(50630809-50630888)
chr4 (10-113)||(52884882-52884985)
chr4 (34-113)||(54741260-54741339)
chr4 (6-83)||(16889590-16889667)
chr4 (6-83)||(41370382-41370459)
chr4 (6-71)||(54017649-54017714)
chr4 (6-86)||(1731701-1731781)
chr4 (6-86)||(16888870-16888950)
chr4 (6-86)||(39792914-39792994)
chr4 (6-86)||(45496827-45496907)
chr4 (6-86)||(54936218-54936298)
chr4 (6-74)||(49302938-49303008)
chr4 (39-113)||(2740695-2740769)
chr4 (6-95)||(44620366-44620455)
chr4 (6-71)||(49880197-49880262)
chr4 (26-95)||(50459734-50459803)
chr4 (6-86)||(2741093-2741173)
chr4 (6-86)||(22028015-22028095)
chr4 (6-74)||(22028423-22028491)
chr4 (6-110)||(23556920-23557024)
chr4 (6-113)||(43174501-43174609)
chr4 (6-85)||(18932803-18932882)
chr4 (14-113)||(49076510-49076609)
chr4 (6-113)||(50002421-50002528)
chr4 (10-113)||(52884690-52884793)
chr4 (31-113)||(10246342-10246424)
chr4 (26-116)||(34004658-34004747)
chr4 (6-71)||(3340844-3340909)
chr4 (6-55)||(31691205-31691254)
chr4 (6-71)||(39404055-39404120)
chr4 (6-86)||(22183318-22183398)
chr4 (7-71)||(51768115-51768179)
chr4 (34-86)||(54017784-54017836)
chr4 (32-87)||(6975536-6975591)
chr4 (11-86)||(41707523-41707598)
chr4 (39-86)||(54343088-54343135)
chr4 (6-95)||(20825849-20825938)
chr4 (9-86)||(36572041-36572118)
chr4 (6-54)||(23817735-23817783)
chr4 (10-86)||(39404420-39404496)
chr4 (6-85)||(36608715-36608794)
chr4 (40-83)||(39699034-39699077)
chr4 (6-113)||(44620655-44620761)
chr4 (6-80)||(54108564-54108639)
chr4 (6-87)||(3271805-3271889)
chr4 (40-86)||(4390189-4390235)
chr4 (6-84)||(28034253-28034331)
chr4 (13-87)||(34544127-34544201)
chr4 (6-87)||(15841422-15841503)
chr4 (42-87)||(45489421-45489466)
chr4 (33-113)||(3341123-3341203)
chr4 (6-86)||(20826239-20826319)
chr4 (42-86)||(44620318-44620362)
[»] chr2 (49 HSPs)
chr2 (6-86)||(28254293-28254373)
chr2 (6-113)||(15880258-15880365)
chr2 (6-113)||(28531370-28531477)
chr2 (6-87)||(28254168-28254249)
chr2 (6-86)||(962620-962700)
chr2 (6-86)||(6421407-6421487)
chr2 (6-86)||(36178661-36178741)
chr2 (6-83)||(41283531-41283608)
chr2 (6-86)||(14745723-14745803)
chr2 (6-86)||(37106210-37106290)
chr2 (6-85)||(7598251-7598330)
chr2 (7-86)||(36005937-36006015)
chr2 (6-85)||(42514672-42514751)
chr2 (23-113)||(31899499-31899589)
chr2 (6-86)||(37105946-37106026)
chr2 (6-113)||(30313173-30313279)
chr2 (6-113)||(33561507-33561614)
chr2 (6-113)||(31468806-31468909)
chr2 (6-87)||(33731669-33731750)
chr2 (6-83)||(40679685-40679762)
chr2 (27-111)||(1769889-1769973)
chr2 (6-86)||(14745350-14745430)
chr2 (6-86)||(16542471-16542551)
chr2 (6-86)||(29873593-29873673)
chr2 (6-86)||(36178227-36178307)
chr2 (6-86)||(37895117-37895197)
chr2 (6-113)||(35580780-35580886)
chr2 (6-113)||(38796676-38796783)
chr2 (43-86)||(40163466-40163509)
chr2 (33-111)||(7598606-7598684)
chr2 (13-71)||(12529091-12529149)
chr2 (6-71)||(5542681-5542746)
chr2 (6-115)||(40733510-40733619)
chr2 (6-86)||(5543054-5543134)
chr2 (6-86)||(6422132-6422212)
chr2 (31-87)||(6712997-6713053)
chr2 (6-86)||(15511551-15511631)
chr2 (6-82)||(36178325-36178401)
chr2 (39-113)||(38796307-38796381)
chr2 (6-79)||(9231278-9231351)
chr2 (6-87)||(23346258-23346338)
chr2 (46-86)||(42515038-42515078)
chr2 (6-85)||(37632653-37632732)
chr2 (6-84)||(31259672-31259750)
chr2 (6-95)||(12910241-12910330)
chr2 (6-79)||(30323493-30323566)
chr2 (23-87)||(29676556-29676620)
chr2 (6-86)||(29874079-29874159)
chr2 (6-86)||(33953827-33953907)
[»] chr6 (38 HSPs)
chr6 (6-86)||(10074419-10074499)
chr6 (7-113)||(10074048-10074154)
chr6 (6-113)||(16107673-16107780)
chr6 (6-86)||(3409281-3409361)
chr6 (7-86)||(9062407-9062485)
chr6 (12-74)||(10911600-10911662)
chr6 (6-108)||(35210204-35210306)
chr6 (6-86)||(2377776-2377856)
chr6 (6-86)||(14748394-14748474)
chr6 (6-86)||(29518525-29518605)
chr6 (6-86)||(29518942-29519022)
chr6 (6-86)||(32460636-32460716)
chr6 (6-86)||(32741201-32741281)
chr6 (6-95)||(2843567-2843657)
chr6 (6-86)||(1127382-1127462)
chr6 (6-86)||(2378148-2378228)
chr6 (6-86)||(3058248-3058328)
chr6 (6-113)||(10073672-10073777)
chr6 (7-86)||(593766-593845)
chr6 (6-113)||(2579928-2580035)
chr6 (10-85)||(5958663-5958738)
chr6 (6-87)||(1846769-1846850)
chr6 (6-86)||(3409682-3409762)
chr6 (6-86)||(16454929-16455009)
chr6 (6-81)||(2578499-2578574)
chr6 (7-86)||(2579549-2579628)
chr6 (23-113)||(16108058-16108148)
chr6 (6-71)||(3415495-3415560)
chr6 (6-86)||(12092538-12092618)
chr6 (6-86)||(26544071-26544151)
chr6 (6-84)||(2578891-2578968)
chr6 (32-86)||(5832108-5832162)
chr6 (6-86)||(16454597-16454677)
chr6 (6-113)||(8481922-8482028)
chr6 (40-86)||(1950275-1950321)
chr6 (31-73)||(14789285-14789327)
chr6 (25-87)||(17135144-17135206)
chr6 (57-113)||(33605649-33605705)
[»] chr5 (42 HSPs)
chr5 (6-113)||(41632777-41632884)
chr5 (6-86)||(41170656-41170736)
chr5 (7-87)||(26075219-26075299)
chr5 (6-113)||(26074607-26074714)
chr5 (6-87)||(9498710-9498791)
chr5 (13-86)||(42508634-42508707)
chr5 (6-86)||(18603176-18603256)
chr5 (6-113)||(26074202-26074309)
chr5 (6-112)||(40296371-40296477)
chr5 (6-95)||(11417033-11417122)
chr5 (6-86)||(299511-299591)
chr5 (11-95)||(3295405-3295489)
chr5 (6-82)||(6224222-6224298)
chr5 (6-86)||(6500472-6500552)
chr5 (6-86)||(6500844-6500924)
chr5 (6-86)||(32487416-32487495)
chr5 (6-86)||(34753081-34753161)
chr5 (6-113)||(13415816-13415923)
chr5 (6-113)||(15370094-15370201)
chr5 (6-113)||(36568623-36568730)
chr5 (8-86)||(3295073-3295151)
chr5 (23-113)||(31509618-31509708)
chr5 (31-86)||(1028598-1028653)
chr5 (6-85)||(2411030-2411109)
chr5 (6-85)||(25327958-25328037)
chr5 (6-75)||(26590966-26591035)
chr5 (23-87)||(31509752-31509816)
chr5 (7-115)||(35150000-35150107)
chr5 (18-86)||(35914871-35914939)
chr5 (26-86)||(36492293-36492353)
chr5 (46-86)||(38427570-38427610)
chr5 (6-113)||(12662708-12662815)
chr5 (31-86)||(26074340-26074395)
chr5 (6-85)||(42405652-42405731)
chr5 (32-87)||(42524738-42524792)
chr5 (6-71)||(15370439-15370504)
chr5 (6-86)||(33747793-33747873)
chr5 (7-86)||(26074839-26074918)
chr5 (31-86)||(27502117-27502172)
chr5 (6-71)||(624233-624298)
chr5 (6-79)||(19275558-19275630)
chr5 (33-85)||(7768873-7768925)
[»] chr3 (50 HSPs)
chr3 (6-113)||(12114618-12114725)
chr3 (6-86)||(21832399-21832479)
chr3 (6-113)||(15773187-15773294)
chr3 (6-113)||(37990695-37990802)
chr3 (6-113)||(29644958-29645065)
chr3 (6-108)||(22304569-22304671)
chr3 (6-87)||(49336743-49336824)
chr3 (6-86)||(41359821-41359901)
chr3 (6-86)||(43346847-43346927)
chr3 (6-113)||(25739481-25739588)
chr3 (7-86)||(35946544-35946623)
chr3 (6-113)||(37991033-37991140)
chr3 (6-85)||(39935011-39935090)
chr3 (6-113)||(33175717-33175827)
chr3 (24-108)||(51886561-51886645)
chr3 (6-113)||(29644637-29644744)
chr3 (6-69)||(32589742-32589805)
chr3 (7-113)||(25755389-25755495)
chr3 (6-68)||(45901754-45901816)
chr3 (6-87)||(4823676-4823757)
chr3 (32-113)||(9240144-9240225)
chr3 (6-83)||(15772879-15772956)
chr3 (6-86)||(33803308-33803388)
chr3 (6-86)||(42342146-42342226)
chr3 (6-86)||(52634698-52634777)
chr3 (6-112)||(1634370-1634477)
chr3 (6-113)||(8327899-8328006)
chr3 (6-85)||(39389093-39389172)
chr3 (6-113)||(42342444-42342551)
chr3 (6-85)||(54017872-54017951)
chr3 (25-86)||(7767389-7767450)
chr3 (6-86)||(32462956-32463037)
chr3 (2-82)||(33362345-33362425)
chr3 (31-86)||(42584903-42584958)
chr3 (6-113)||(45395709-45395816)
chr3 (6-113)||(47964971-47965078)
chr3 (6-113)||(53577359-53577466)
chr3 (31-113)||(39914247-39914329)
chr3 (32-86)||(50612534-50612588)
chr3 (6-84)||(54018254-54018332)
chr3 (11-116)||(39336290-39336395)
chr3 (6-86)||(3135129-3135209)
chr3 (34-86)||(31190039-31190091)
chr3 (6-113)||(53118031-53118137)
chr3 (11-113)||(44160605-44160707)
chr3 (6-71)||(3384322-3384387)
chr3 (41-86)||(11661557-11661602)
chr3 (6-55)||(52634993-52635042)
chr3 (6-50)||(22303715-22303759)
chr3 (40-108)||(37726504-37726572)
[»] chr8 (55 HSPs)
chr8 (6-112)||(34835205-34835311)
chr8 (13-86)||(5420673-5420746)
chr8 (12-113)||(41972153-41972254)
chr8 (6-86)||(3669709-3669789)
chr8 (6-114)||(45122113-45122221)
chr8 (6-85)||(33113423-33113502)
chr8 (6-71)||(34835512-34835577)
chr8 (6-71)||(34835778-34835843)
chr8 (6-86)||(147473-147553)
chr8 (8-84)||(45122648-45122724)
chr8 (6-85)||(9609108-9609187)
chr8 (8-118)||(9608735-9608845)
chr8 (6-83)||(9483243-9483320)
chr8 (6-115)||(40518575-40518684)
chr8 (6-86)||(70330-70410)
chr8 (6-86)||(3038346-3038426)
chr8 (10-86)||(25561876-25561952)
chr8 (6-86)||(34834898-34834978)
chr8 (6-85)||(1014301-1014380)
chr8 (6-113)||(4154722-4154829)
chr8 (6-113)||(9309350-9309457)
chr8 (6-113)||(30359266-30359373)
chr8 (7-86)||(45121967-45122046)
chr8 (6-83)||(43398124-43398204)
chr8 (6-71)||(18372050-18372115)
chr8 (6-95)||(20870629-20870718)
chr8 (6-95)||(40579562-40579651)
chr8 (6-86)||(6876918-6876998)
chr8 (23-95)||(9482677-9482749)
chr8 (7-86)||(1513972-1514051)
chr8 (23-82)||(18373004-18373063)
chr8 (6-108)||(1013927-1014029)
chr8 (31-113)||(8794106-8794188)
chr8 (10-113)||(9308972-9309077)
chr8 (6-71)||(9507819-9507884)
chr8 (6-95)||(43274835-43274924)
chr8 (6-86)||(3670082-3670162)
chr8 (6-86)||(8918820-8918900)
chr8 (6-74)||(40518105-40518173)
chr8 (2-85)||(4154333-4154415)
chr8 (23-82)||(18372676-18372734)
chr8 (39-86)||(18372788-18372835)
chr8 (6-113)||(30359604-30359711)
chr8 (31-86)||(41416252-41416307)
chr8 (25-95)||(3037783-3037853)
chr8 (23-113)||(9620749-9620839)
chr8 (28-113)||(12283868-12283953)
chr8 (43-87)||(18372349-18372393)
chr8 (42-86)||(25561736-25561780)
chr8 (6-86)||(37544546-37544626)
chr8 (6-86)||(30441103-30441187)
chr8 (31-86)||(45121737-45121792)
chr8 (6-47)||(5915928-5915969)
chr8 (6-87)||(32640588-32640664)
chr8 (26-82)||(32305503-32305559)
[»] scaffold0078 (2 HSPs)
scaffold0078 (6-113)||(5352-5459)
scaffold0078 (6-113)||(4977-5084)
[»] chr7 (43 HSPs)
chr7 (6-113)||(7517575-7517682)
chr7 (6-113)||(30245072-30245179)
chr7 (6-113)||(45434631-45434738)
chr7 (6-86)||(22566718-22566798)
chr7 (6-86)||(22567095-22567175)
chr7 (7-115)||(40230348-40230456)
chr7 (6-113)||(23433-23540)
chr7 (6-113)||(118357-118464)
chr7 (6-113)||(1085672-1085779)
chr7 (6-113)||(16569191-16569298)
chr7 (6-113)||(16596364-16596471)
chr7 (7-86)||(37533067-37533146)
chr7 (23-113)||(28301616-28301706)
chr7 (6-87)||(6054581-6054662)
chr7 (6-86)||(19122753-19122833)
chr7 (6-86)||(30244292-30244372)
chr7 (6-113)||(7554020-7554127)
chr7 (7-113)||(43241490-43241596)
chr7 (6-95)||(11845204-11845293)
chr7 (6-87)||(34218090-34218171)
chr7 (6-86)||(24177457-24177537)
chr7 (6-113)||(40094830-40094937)
chr7 (6-113)||(45433236-45433343)
chr7 (8-87)||(47129116-47129195)
chr7 (6-83)||(1085304-1085381)
chr7 (6-83)||(20599339-20599416)
chr7 (6-71)||(37533420-37533485)
chr7 (6-86)||(9901666-9901745)
chr7 (6-86)||(29157587-29157667)
chr7 (6-86)||(45754737-45754817)
chr7 (6-113)||(8128497-8128604)
chr7 (8-115)||(36622953-36623060)
chr7 (6-108)||(14681510-14681612)
chr7 (40-113)||(36109007-36109080)
chr7 (6-66)||(30253534-30253594)
chr7 (7-71)||(36939790-36939854)
chr7 (31-113)||(36534865-36534947)
chr7 (41-86)||(30255361-30255406)
chr7 (6-101)||(24838757-24838853)
chr7 (41-113)||(30245489-30245561)
chr7 (39-113)||(30244696-30244770)
chr7 (6-79)||(37345947-37346020)
chr7 (25-86)||(41910669-41910730)
[»] scaffold0702 (2 HSPs)
scaffold0702 (6-86)||(570-650)
scaffold0702 (39-86)||(231-278)
[»] scaffold0734 (2 HSPs)
scaffold0734 (23-113)||(5772-5862)
scaffold0734 (13-85)||(5419-5491)
[»] scaffold0391 (1 HSPs)
scaffold0391 (6-86)||(1162-1242)
[»] scaffold0027 (1 HSPs)
scaffold0027 (7-87)||(47381-47461)
[»] scaffold0171 (1 HSPs)
scaffold0171 (13-113)||(17519-17619)
[»] scaffold0504 (1 HSPs)
scaffold0504 (31-87)||(10192-10248)


Alignment Details
Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 7 - 321
Target Start/End: Complemental strand, 4956292 - 4955999
Alignment:
Q  7 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttg 106  Q
    ||||| |||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |                     ||    
T  4956292 ttacctaaaactttagagcaatgagtttatggatcctcttacttataagatgttcaacctttacttttctatccgtt---------------------tg 4956214  T
Q  107 cacacaatagaactacatgctacaacctatatttcctttctctacttttttagaactgcatgcaagttctaagaacttaccagaaatctttgttgcnnnn 206  Q
    |||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
T  4956213 cacacaatagaactacctgctgccacctatatttcctttctctacttttttagaactgcatgcaagttctaagaacttaccagaaatctttgttgcaaaa 4956114  T
Q  207 nnngtttaataaaagcaagagttgtcatcttttgacctaaaaactagattagacaaattaataatacttaactttaatttttgaaaaggaataatcataa 306  Q
       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  4956113 aaagtttaataaaagcaagagttgtcatcttttgacctaaaaactagattagacaaattaataatacttaactttaatttttgaaaaagaataatcataa 4956014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 22077551 - 22077658
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| ||| | ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||  |||||| || || |||    
T  22077551 cttacccaaaaccttaaggctacgagtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataactcacactt 22077650  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  22077651 gcacacaa 22077658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 22077166 - 22077243
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgat 83  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||    
T  22077166 cttatccaaaaccttagggcaatgagtttatgggtcctcttacttataaggtattcaacctttacttttctatccgat 22077243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 115
Target Start/End: Original strand, 22077885 - 22077993
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    ||||||| |||| ||||| | ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| | || |||||| || || |||    
T  22077885 cttaccccaaaccttagg-ctatgagtttatgggtcctcttacttataagatgttcaacctttatttttctatccgatttaaaacatataactcacactt 22077983  T
Q  106 gcacacaata 115  Q
    ||||||||||    
T  22077984 gcacacaata 22077993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 44290514 - 44290594
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| || |||||||||||    
T  44290514 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtg 44290594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 5320021 - 5320128
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| ||| ||||||||||| ||||||| ||||||||| |||||||| ||||||||||||||||||||| | |||||| || || |||    
T  5320021 cttacccaaaaccttaaggctatgagtttatgggtcctctcacttataaggtgttcaacttttacttttctatccgatgtggaacatataactcacactt 5320120  T
Q  106 gcacacaa 113  Q
    ||| ||||    
T  5320121 gcatacaa 5320128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 3550822 - 3550742
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||| ||||||    
T  3550822 cttacccaaaactttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatctgatgtg 3550742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 66528 - 66635
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| ||| ||  |||||||  |||||||||||||||| ||||||||||||||||||||||||||| || | |||||| || || |||    
T  66528 cttacccaaaaccttaaggccatatgtttatggatcctcttacttataaggtgttcaacctttacttttctatccgatatggaacatataactcacactt 66627  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  66628 gcacacaa 66635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 3875387 - 3875494
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||| ||||| ||| ||||||| ||||||| ||||||||||||||||| ||| |||||||||||||| |||||||||||   |||||| || || |||    
T  3875387 cttacctaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgtacaacctttacttttttatccgatgtgtgacatataactgactctt 3875486  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  3875487 gcacacaa 3875494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 24600370 - 24600477
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    ||||| |||||| ||| | ||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||| ||   |||||| || || |||    
T  24600370 cttacacaaaaccttaagacaatgagtttatgagttctcttacttataatatgttcaacctttacttttctatccgatatgggacatataactcacactt 24600469  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  24600470 gcacacaa 24600477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 44290882 - 44290961
Alignment:
Q  7 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  44290882 ttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtg 44290961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 5528806 - 5528891
Alignment:
Q  2 cacacttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    |||| ||||||||||| ||| |  |||||||||||| ||||||||| ||||||||||||||||||||||| || ||||||||||||    
T  5528806 cacatttacccaaaaccttaagaaaatgagtttatgagtcctcttatttataagatgttcaacctttactcttttatccgatgtga 5528891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 17294679 - 17294599
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||  ||||||||||||||| || |||||||||||    
T  17294679 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactcttttatccgatgtg 17294599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 26661578 - 26661658
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||||||||||| ||||||| ||||||||| ||||||||||||||| || || ||||||||    
T  26661578 cttacccaaaaccttaaggcaatgagtttatgggtcctctcacttataaggtgttcaacctttactcttttacccgatgtg 26661658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 50052079 - 50052159
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||||||| |  |||  ||||||| ||||||||||||||||||||||||||||||||| || |||||||||||    
T  50052079 cttacccaaaactttaagaaaataggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtg 50052159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 32594772 - 32594851
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    |||||||||||| ||| | ||||||||||||| ||||||||||||||||| ||||||||||||||| || |||| |||||    
T  32594772 cttacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 32594851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 34364609 - 34364502
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| ||| ||| ||||| |  |||||||||||||||| ||||||||||||||| || ||||||||||||  |||||| || || |||    
T  34364609 cttacccaaaaccttaaggctatgggtttacggatcctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacactt 34364510  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  34364509 gcacacaa 34364502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 34365027 - 34364920
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| ||| ||| ||||||| ||||||||||||||||| ||||||||||||| | || |||||||||||   |||||| || || |||    
T  34365027 cttacccaaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttcaacctttattattttatccgatgtgtgacatataactcacactt 34364928  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  34364927 gcacacaa 34364920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 39066256 - 39066363
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||| ||||||| ||| | |||||| |||||| ||| ||||| ||||||| |||||||||||||||||||||||||||||| |  ||||| || || |||    
T  39066256 cttatccaaaaccttaagacaatgattttatgggtcatcttagttataaggtgttcaacctttacttttctatccgatgtggaatatataactcacactt 39066355  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  39066356 gcacacaa 39066363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 41157093 - 41157018
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccg 81  Q
    |||||||||||| |||  |||||||||||||| ||||||||||||||||| ||||||||||||||| || ||||||    
T  41157093 cttacccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccg 41157018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 41184489 - 41184588
Alignment:
Q  14 aaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    |||| ||| ||||||| ||||||| ||||||||||||||||  ||||||||||||||| || ||||||||||||  |||||| || || |||||||||||    
T  41184489 aaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgagacatataactcacacttgcacacaa 41184588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 66143 - 66225
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttc-aacctttacttttctatccgatgtga 87  Q
    |||||||||||| ||| ||| ||  ||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  66143 cttacccaaaaccttaaggccataggtttatgggtcctcttacttataaggtgttcaaacctttacttttctatccgatgtga 66225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 24132038 - 24132119
Alignment:
Q  2 cacacttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatg 84  Q
    |||||||||||||| ||| ||| |||||||||||||  ||| |||| ||||||| ||||||||||||||||||||||||||||    
T  24132038 cacacttacccaaaccttaagg-caatgagtttatggatccccttatttataaggtgttcaacctttacttttctatccgatg 24132119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 37556213 - 37556133
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact-tttctatccgatgtg 86  Q
    |||||||||||| ||| ||| ||| ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  37556213 cttacccaaaaccttaaggctatgggtttatg-gtcctcttacttataagatgttcaacctttactatttttatccgatgtg 37556133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 31767217 - 31767324
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| |||| |  ||| ||| ||||||||||||||||| ||||||||||||||| || ||||||||||| | |||||| |  || |||    
T  31767217 cttacccaaaaccttaaggcattaggttaatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtggaacatataacccacactt 31767316  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  31767317 gcacacaa 31767324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 40082508 - 40082430
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    |||||||||||| ||| |||||||| ||||||  |||||||||||||||| ||||||||||||||| || ||||||||||    
T  40082508 cttacccaaaaccttaaggcaatgaatttatga-tcctcttacttataaggtgttcaacctttactattttatccgatgt 40082430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 41142473 - 41142394
Alignment:
Q  7 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||| ||||| ||| ||||||| ||||||| ||||| ||||||||||| ||||||||||||||| || |||||||||||    
T  41142473 ttaccaaaaaccttaaggcaatgggtttatgggtccttttacttataaggtgttcaacctttactgttttatccgatgtg 41142394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 48588544 - 48588623
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    |||||||||||| ||| |||||||| |||| | ||| ||||||||||||| ||||||||||||||| || ||||||||||    
T  48588544 cttacccaaaaccttaaggcaatgaatttacgggtcttcttacttataaggtgttcaacctttactattttatccgatgt 48588623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 1188645 - 1188751
Alignment:
Q  7 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttg 106  Q
    ||||||||||| |||  |||||||||||||| ||| ||| |||||||| || ||||||||  ||||||||||||||| || | |||||| || || ||||    
T  1188645 ttacccaaaaccttaaagcaatgagtttatgagtcttctcacttataaaatattcaacctccacttttctatccgatatggaacatataactcacacttg 1188744  T
Q  107 cacacaa 113  Q
    |||||||    
T  1188745 cacacaa 1188751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 21378122 - 21378204
Alignment:
Q  31 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    ||||||| ||||||||||||||||||| ||||||||||||| ||||||||||| ||   |||||| || || |||||||||||    
T  21378122 gtttatgggtcctcttacttataagatattcaacctttactgttctatccgatctgggacatataactgacacttgcacacaa 21378204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 30630694 - 30630775
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    |||||||||||||||| ||||||| ||||||| || |||||||||||||  |||  |||||||| |||| ||||||||||||    
T  30630694 cttacccaaaactttaaggcaatgtgtttatgggttctcttacttataaagtgtcaaacctttaattttttatccgatgtga 30630775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 3537655 - 3537735
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| | ||||| ||||||  ||||||||||| ||||| ||||||||||||||| || |||||||||||    
T  3537655 cttacccaaaaccttaagccaatgggtttataggtcctcttactcataaggtgttcaacctttactattttatccgatgtg 3537735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 44685551 - 44685451
Alignment:
Q  14 aaactttagggcaatgagtttatgtgtcctcttacttataagatgttc-aacctttacttttctatccgatgtgaagcatatagcttacccttgcacaca 112  Q
    |||| ||| ||||||||||||||  ||||||||||||||||| | ||| |||||||||||||||||||||| ||   |||||| || || ||||||||||    
T  44685551 aaacattaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatataactcacacttgcacaca 44685452  T
Q  113 a 113  Q
    |    
T  44685451 a 44685451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 3537228 - 3537283
Alignment:
Q  31 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  3537228 gtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtg 3537283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 29798301 - 29798222
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    |||| |||| || ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || ||||| ||||    
T  29798301 cttatccaagaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatccaatgt 29798222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 41157477 - 41157370
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    ||||| |||||| | | ||||||| ||||||| ||||||||||||||||| |||||||| |||||| || |||| ||||||   |||||| || || |||    
T  41157477 cttactcaaaacctaaaggcaatgggtttatgggtcctcttacttataaggtgttcaacttttactcttttatctgatgtgggacatataactcacactt 41157378  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  41157377 gcacacaa 41157370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 14318969 - 14318880
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatata 95  Q
    |||||||||||| ||| ||||||   |||||| ||| ||||||||||||| ||||||||||||||| || ||||||| ||| | ||||||    
T  14318969 cttacccaaaaccttaaggcaatagatttatgggtcttcttacttataaggtgttcaacctttactattttatccgacgtggaacatata 14318880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 45084457 - 45084404
Alignment:
Q  33 ttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||| ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  45084457 ttatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtg 45084404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 41759585 - 41759505
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| |||||||  ||||||  || ||||||||||||| |||||||| |||||| || |||||||||||    
T  41759585 cttacccaaaaccttaaggcaatggatttatggatcatcttacttataaggtgttcaacttttactattttatccgatgtg 41759505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 82
Target Start/End: Complemental strand, 5575173 - 5575130
Alignment:
Q  39 gtcctcttacttataagatgttcaacctttacttttctatccga 82  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||    
T  5575173 gtcctcttacttataaggtgttcaacctttactcttctatccga 5575130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 9956011 - 9955942
Alignment:
Q  6 cttacccaaaactttagggcaatgagttta-tgtgtcctcttacttataagatgttcaacctttactttt 74  Q
    |||||||||||| ||| ||||||  ||||| || ||||||||||||||||  ||||||||||||||||||    
T  9956011 cttacccaaaaccttaaggcaattggtttaatgggtcctcttacttataatgtgttcaacctttactttt 9955942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 26661954 - 26662019
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 71  Q
    |||||||||||| ||| ||||||  ||||||| ||| ||| ||||||||| |||||||||||||||    
T  26661954 cttacccaaaaccttaaggcaatcggtttatgggtcttctcacttataaggtgttcaacctttact 26662019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 11977382 - 11977302
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| |||| |  ||||||| || |||||||||||||| |||||||| |||||| || || ||||||||    
T  11977382 cttacccaaaaccttaaggcattaggtttatgagtgctcttacttataaggtgttcaacatttactgttttacccgatgtg 11977302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 38804411 - 38804491
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||  ||| |||||||  |||||||||||||||  ||||||||||||||| || ||| |||||||    
T  38804411 cttacccaaaaccttaaggttatgggtttatggatcctcttacttataatgtgttcaacctttactcttttattcgatgtg 38804491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 19283511 - 19283618
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||| ||||||| ||| ||| ||||||||||||||||||| | ||| ||  || |||||||  ||||||||||||| ||||   |||||| || || |||    
T  19283511 cttatccaaaaccttaaggcgatgagtttatgtgtcctctcatttacaaagtgctcaacctccacttttctatccggtgtgggacatataactcacactt 19283610  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  19283611 gcacacaa 19283618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 37850681 - 37850763
Alignment:
Q  31 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    ||||||| || |||||||||||||| |||||||||| |||| || ||| |||||||   |||||| || || |||||||||||    
T  37850681 gtttatgggttctcttacttataaggtgttcaacctctactgttttatgcgatgtgggacatataactcacacttgcacacaa 37850763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 34649545 - 34649460
Alignment:
Q  1 tcacacttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||| |||||||||||| ||| |||| |  ||||||| || ||   ||||||||| ||||||||||||||| || |||||||||||    
T  34649545 tcactcttacccaaaaccttaaggcattaggtttatgggttcttgcacttataaggtgttcaacctttactcttttatccgatgtg 34649460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 44043828 - 44043893
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 71  Q
    |||||||||||  ||| | ||||| ||||||| ||| ||||||||||||| |||||||| ||||||    
T  44043828 cttacccaaaatcttaagacaatgggtttatgggtcatcttacttataaggtgttcaacatttact 44043893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 1187440 - 1187528
Alignment:
Q  26 aatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaat 114  Q
    |||||||||||| ||| ||| |||||||| ||||| |||||  |||||| ||| ||||||||  ||||||  | || ||||||||||||    
T  1187440 aatgagtttatgggtcttctcacttataaaatgtttaacctccacttttatattcgatgtgagacatataattcacacttgcacacaat 1187528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 24448360 - 24448272
Alignment:
Q  25 caatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    ||||||||||||| | ||||| |||||||| ||||||||| |  |||||||| |  |||||  | |||||| ||||| |||||||||||    
T  24448360 caatgagtttatgagccctctcacttataaaatgttcaacttccacttttctttgagatgtctaacatataacttacacttgcacacaa 24448272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 4e-35; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 3244505 - 3244612
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||| || || |||    
T  3244505 cttacccaaaactttaagacaatgagtttatgggtcctcttacttataagatgttcaacctttacttttctatccgatgtgagacatataactcacactt 3244604  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  3244605 gcacacaa 3244612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 25483438 - 25483331
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| ||||||| |||||||  |||||||||||||||||||||||||||||||| || ||||||||||||  |||||| || || |||    
T  25483438 cttacccaaaaccttaaggcaatgggtttatggatcctcttacttataagatgttcaacctttactattttatccgatgtgagacatataactcacactt 25483339  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  25483338 gcacacaa 25483331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 36629339 - 36629259
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||||||| |||| ||| |||||||||||||||||||||    
T  36629339 cttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgtttaacttttacttttctatccgatgtg 36629259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 44621104 - 44621024
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| | ||||||||||||||| ||||||||||||||| ||||||||||||||| || |||||||||||    
T  44621104 cttacccaaaaccttaagacaatgagtttatgtgccctcttacttataaggtgttcaacctttactgttttatccgatgtg 44621024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 4955371 - 4955478
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||| ||| || |||||||| |||  |||||| || || |||    
T  4955371 cttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaaccttaactattttatccgatatgagacatataactcacactt 4955470  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  4955471 gcacacaa 4955478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 55933178 - 55933257
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||||||| ||||||||| ||||| || ||||||||||    
T  55933178 cttacccaaaactttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacccttactattttatccgatgt 55933257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 34646703 - 34646783
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||||||||||| ||||||||| ||||||| |||||||| |||||| || |||||||||||    
T  34646703 cttacccaaaaccttaaggcaatgagtttatgagtcctcttagttataaggtgttcaacatttactgttttatccgatgtg 34646783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 54109014 - 54108935
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||||| ||| ||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  54109014 cttacccaaaacttaagg-caatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtg 54108935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 10246021 - 10245915
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| |||  || ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||  ||||||| || || |||    
T  10246021 cttacccaaaaccttaaggctttgggtttatg-gtcctcttacttataaggtgttcaacctttactcttttatccgatgtggggcatataactcacactt 10245923  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  10245922 gcacacaa 10245915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 32941177 - 32941256
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    |||||||||||| ||| ||||||||||||||| | ||||||| ||||||| ||||||||||||||| |||| ||||||||    
T  32941177 cttacccaaaaccttaaggcaatgagtttatgagccctcttatttataaggtgttcaacctttactgttctttccgatgt 32941256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 50630809 - 50630888
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||  ||||||||||||||| || ||||||||||    
T  50630809 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataatgtgttcaacctttactattttatccgatgt 50630888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 113
Target Start/End: Complemental strand, 52884985 - 52884882
Alignment:
Q  10 cccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcac 109  Q
    |||||||| ||| ||||||| |||||||  |||||||||||||||| ||||||||||||||| || |||||||||||   |||||| || || |||||||    
T  52884985 cccaaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcac 52884886  T
Q  110 acaa 113  Q
    ||||    
T  52884885 acaa 52884882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 54741260 - 54741339
Alignment:
Q  34 tatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||  | || |||||||||||    
T  54741260 tatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataattcacacttgcacacaa 54741339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 16889590 - 16889667
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgat 83  Q
    |||||||||||||||| |||| |  |||||||  |||||||||||||||| | |||||||||||||||||||||||||    
T  16889590 cttacccaaaactttaaggcagtaggtttatgaatcctcttacttataaggtattcaacctttacttttctatccgat 16889667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 41370459 - 41370382
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgat 83  Q
    |||||||||||||||| ||||||| ||||||| ||||||||||||||||| | |||||| |||||| || ||||||||    
T  41370459 cttacccaaaactttaaggcaatgggtttatgggtcctcttacttataaggttttcaacatttactattttatccgat 41370382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 54017649 - 54017714
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 71  Q
    |||||| ||||| ||| ||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  54017649 cttacctaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttact 54017714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 1731701 - 1731781
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||  ||||||| ||||||||| ||||||||||||||||||||||| || |||| ||||||    
T  1731701 cttacccaaaaccttaaggcaattggtttatgggtcctcttatttataagatgttcaacctttactgttttatctgatgtg 1731781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 16888870 - 16888950
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||||||||  || | ||||||||||||  || |||||||||||||| | ||||||||||||||||||||||||||||    
T  16888870 cttacccaaaaccgtaagacaatgagtttataggttctcttacttataaggtattcaacctttacttttctatccgatgtg 16888950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 39792914 - 39792994
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||||||||| |  ||||||| |||||||| |||||||| |||||||||||||| ||||||    
T  39792914 cttacccaaaaccttaaggcaatgagtttacggttcctctttcttataaggtgttcaacatttacttttctatctgatgtg 39792994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 45496907 - 45496827
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| | ||||||||||||  ||||||||||||||||| ||||||||||||||  || |||||||||||    
T  45496907 cttacccaaaaccttaagacaatgagtttataggtcctcttacttataaggtgttcaacctttacgattttatccgatgtg 45496827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 54936298 - 54936218
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||| ||| ||||||||||||||| || |||| ||||||    
T  54936298 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttacaaggtgttcaacctttactattttatctgatgtg 54936218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 49303008 - 49302938
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttac--ttataagatgttcaacctttactttt 74  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||  ||||||||||||||||||||||||||    
T  49303008 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttttataagatgttcaacctttactttt 49302938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 2740769 - 2740695
Alignment:
Q  39 gtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||   |||||| || || |||||||||||    
T  2740769 gtcctcttacttataaggtgttcaacctttactgttctatccgatgtgggacatataactcacacttgcacacaa 2740695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 44620455 - 44620366
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatata 95  Q
    |||||||||||| ||| ||||||| ||||||| |  |||||| ||||||| ||||||||||||||| || ||||||||||| | ||||||    
T  44620455 cttacccaaaaccttaaggcaatgggtttatgggctctcttatttataaggtgttcaacctttactgttttatccgatgtggaacatata 44620366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 49880262 - 49880197
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 71  Q
    |||||||||||| ||| |||| || ||||||| ||||||||||||||||| |||||||||||||||    
T  49880262 cttacccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgttcaacctttact 49880197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 50459803 - 50459734
Alignment:
Q  26 aatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatata 95  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||| || || |||||||| | ||||||    
T  50459803 aatgggtttatgagtcctcttacttataagatgttcaacctttactcttttaaccgatgtggaacatata 50459734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 2741173 - 2741093
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| |||||||   ||||| ||||||||||||||||| | ||||||||||||| ||||||| ||||||    
T  2741173 cttacccaaaaccttaaggcaatggagttatgggtcctcttacttataaggtattcaacctttactattctatctgatgtg 2741093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 22028015 - 22028095
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||  ||||||| ||||||||||||||||| ||||||||||||  | || |||||||||||    
T  22028015 cttacccaaaaccttaaggcaatatgtttatgggtcctcttacttataaggtgttcaacctttcgtattttatccgatgtg 22028095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 22028423 - 22028491
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttactttt 74  Q
    |||||||||||| ||| | ||||||||||||| ||||||||||| ||||| ||||||||||||| ||||    
T  22028423 cttacccaaaacattaagacaatgagtttatgggtcctcttactaataaggtgttcaacctttattttt 22028491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 110
Target Start/End: Original strand, 23556920 - 23557024
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||| ||||||||||| |||||||| ||||||  | |||||| |||||| |||||||||||  ||||||||||||||||| || ||| || || || |||    
T  23556920 cttatccaaaactttaaggcaatgattttatggattctcttatttataaaatgttcaacctccacttttctatccgatgtaaaacatttaactcacactt 23557019  T
Q  106 gcaca 110  Q
    |||||    
T  23557020 gcaca 23557024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 43174609 - 43174501
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact-tttctatccgatgtgaagcatatagcttaccct 104  Q
    ||||||||| |||||| ||  ||  ||||||||||||||||||||||||| ||||||||||||||| ||| |||| ||||||  ||||||| || || ||    
T  43174609 cttacccaacactttaaggtcataggtttatgtgtcctcttacttataaggtgttcaacctttactctttttatctgatgtgtggcatataactcacact 43174510  T
Q  105 tgcacacaa 113  Q
    || ||||||    
T  43174509 tgtacacaa 43174501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 18932803 - 18932882
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    |||||| ||||| ||| ||||||| ||||||| ||||||||| ||||||| | ||||||||||||| || ||||||||||    
T  18932803 cttacctaaaaccttaaggcaatgggtttatgggtcctcttatttataaggtattcaacctttactattttatccgatgt 18932882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 113
Target Start/End: Original strand, 49076510 - 49076609
Alignment:
Q  14 aaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    |||||||| | ||||| ||||||  ||||||||||||||||| ||||||||||||||| || |||||||| ||   |||||| || || |||||||||||    
T  49076510 aaactttaagacaatgggtttataggtcctcttacttataaggtgttcaacctttactgttttatccgatatggtacatataactcacacttgcacacaa 49076609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 50002528 - 50002421
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| | |||||  |||||| ||||||||||||| ||  ||||||||||||||| || ||||||||||||  |||||| || || |||    
T  50002528 cttacccaaaaccttaagacaatggatttatgggtcctcttacttaaaaagtgttcaacctttactcttttatccgatgtgagacatataactcacactt 50002429  T
Q  106 gcacacaa 113  Q
    ||| ||||    
T  50002428 gcaaacaa 50002421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 113
Target Start/End: Complemental strand, 52884793 - 52884690
Alignment:
Q  10 cccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcac 109  Q
    |||||||| ||| ||||||| ||||||   || ||||||||||||| ||||||||||||||| || |||||||||||   |||||| || || |||||||    
T  52884793 cccaaaaccttaaggcaatgggtttatcgatcatcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacacttgcac 52884694  T
Q  110 acaa 113  Q
    ||||    
T  52884693 acaa 52884690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 10246424 - 10246342
Alignment:
Q  31 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    ||||||| ||||||| ||||||||||||||||||||||||| || |||||||| |||  |||||| |  || |||||||||||    
T  10246424 gtttatgggtcctctaacttataagatgttcaacctttactcttttatccgatttgagacatataacagacacttgcacacaa 10246342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 34004658 - 34004747
Alignment:
Q  26 aatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaatag 116  Q
    |||||||||||| ||||||||||||||||| ||||||||||||| |||| ||||  |||||   |||||| || || ||||||||||||||    
T  34004658 aatgagtttatgggtcctcttacttataagttgttcaacctttagtttt-tatcatatgtgtgacatataactcacacttgcacacaatag 34004747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 3340909 - 3340844
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 71  Q
    |||||||||||| ||| |||| || ||||||| ||||||||||||||||| || ||||||||||||    
T  3340909 cttacccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgctcaacctttact 3340844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 31691254 - 31691205
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataag 55  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||||||||    
T  31691254 cttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataag 31691205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 39404120 - 39404055
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 71  Q
    |||||||||||| |||  || ||||||||||| ||||||||||||||||  |||||||||||||||    
T  39404120 cttacccaaaaccttaatgctatgagtttatgagtcctcttacttataaagtgttcaacctttact 39404055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 22183318 - 22183398
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||| ||||||| ||| ||||||| ||||||| ||||| ||||||||||  |||||||| |||||| || |||||||||||    
T  22183318 cttatccaaaaccttaaggcaatgggtttatgggtccttttacttataaattgttcaacatttactcttttatccgatgtg 22183398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 51768115 - 51768179
Alignment:
Q  7 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 71  Q
    ||||||||||| ||| | ||||||||||||| ||||||||| ||||||| |||||||| ||||||    
T  51768115 ttacccaaaaccttaagacaatgagtttatgagtcctcttatttataaggtgttcaacatttact 51768179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 54017784 - 54017836
Alignment:
Q  34 tatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||| ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  54017784 tatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtg 54017836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 6975536 - 6975591
Alignment:
Q  32 tttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    |||||| ||||||||||||||||||| ||||||||||||| || |||| |||||||    
T  6975536 tttatgagtcctcttacttataagatattcaacctttactattttatcggatgtga 6975591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 41707523 - 41707598
Alignment:
Q  11 ccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||| ||| | ||||||||||||| || || ||||||||| | ||||||||||||||| || |||||||||||    
T  41707523 ccaaaaccttaagacaatgagtttatgggttcttttacttatatggtgttcaacctttactcttttatccgatgtg 41707598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 54343088 - 54343135
Alignment:
Q  39 gtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  54343088 gtcctcttacttataaggtgttcaacctttactattttatccgatgtg 54343135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 20825938 - 20825849
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatata 95  Q
    |||||||||||| ||| ||| |   ||||||| || |||||| ||||||| ||||||||||||||| || ||||||||||| | ||||||    
T  20825938 cttacccaaaaccttaaggctaaaggtttatgggtgctcttatttataaggtgttcaacctttactcttttatccgatgtggaacatata 20825849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 36572118 - 36572041
Alignment:
Q  9 acccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||||| ||| |||||||  |||||| ||| ||||||||||||| |||||||| |||||| || ||| |||||||    
T  36572118 acccaaaaccttaaggcaatggatttatgggtcttcttacttataaggtgttcaacatttactcttttattcgatgtg 36572041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 23817735 - 23817783
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataa 54  Q
    |||||||||||| ||| |||||||||||||||  |||||||||||||||    
T  23817735 cttacccaaaaccttaaggcaatgagtttatgaatcctcttacttataa 23817783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 39404496 - 39404420
Alignment:
Q  10 cccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||| ||| ||| ||  ||||||| ||||||||||||||||| ||||| ||||||||| || |||| ||||||    
T  39404496 cccaaaaccttaaggctataggtttatgggtcctcttacttataaggtgttccacctttactcttttatctgatgtg 39404420  T

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Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 36608715 - 36608794
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    |||||||||||| ||| | |||||  ||||||  ||||||||||||| || |||||||| |||||| || ||||||||||    
T  36608715 cttacccaaaaccttaagacaatggatttatggatcctcttacttatgaggtgttcaacttttactcttttatccgatgt 36608794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 83
Target Start/End: Original strand, 39699034 - 39699077
Alignment:
Q  40 tcctcttacttataagatgttcaacctttacttttctatccgat 83  Q
    |||||||||||| || ||||||||||||||||||| ||||||||    
T  39699034 tcctcttacttagaatatgttcaacctttacttttatatccgat 39699077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 44620761 - 44620655
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| ||  ||| ||||||| ||||||||||||||||  |||||||||| |||| ||  ||||||||||   |||||| || || |||    
T  44620761 cttacccaaaaccttaaggttatg-gtttatgggtcctcttacttataaagtgttcaacctctactatttcatccgatgtgggacatataactcacactt 44620663  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  44620662 gcacacaa 44620655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 54108639 - 54108564
Alignment:
Q  6 cttacccaaaactttagggcaatgagttt-atgtgtcctcttacttataagatgttcaacctttacttttctatcc 80  Q
    |||| ||||||| ||| |||||||| ||| ||| ||||| ||||||||||| ||||||||||||||| || |||||    
T  54108639 cttagccaaaaccttaaggcaatgaattttatgggtccttttacttataaggtgttcaacctttactattttatcc 54108564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 3271889 - 3271805
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttactt---ataagatgttcaacctttacttttctatccgatgtga 87  Q
    |||||||||||| ||| ||||||  ||||||| || |||||||||   ||||| |||| ||| |||||||||||||| |||||||    
T  3271889 cttacccaaaaccttaaggcaataggtttatgggttctcttacttataataaggtgtttaacttttacttttctatctgatgtga 3271805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 4390189 - 4390235
Alignment:
Q  40 tcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||||||| ||||||||||||||| || |||| ||||||    
T  4390189 tcctcttacttataaggtgttcaacctttactcttttatctgatgtg 4390235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 28034331 - 28034253
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatg 84  Q
    |||||| ||||| |||  ||||| |||||||| || |||| ||||||||  ||||||||||  ||||||||||||||||    
T  28034331 cttacctaaaaccttaaagcaataagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatg 28034253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 34544201 - 34544127
Alignment:
Q  13 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    ||||| ||| ||||||||||||||| ||||||| | ||||||  || |||||||  |||||||||| ||||||||    
T  34544201 aaaaccttaaggcaatgagtttatgggtcctctcatttataaagtgatcaacctccacttttctattcgatgtga 34544127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 15841422 - 15841503
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    |||||||||||| ||| ||||||| |||||||  |||||| ||||| ||  ||||||||||  ||||||||||  |||||||    
T  15841422 cttacccaaaaccttaaggcaatgtgtttatgaatcctctcacttacaaagtgttcaacctccacttttctatttgatgtga 15841503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 45489421 - 45489466
Alignment:
Q  42 ctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    |||||||||||| | ||||||||||||||| || ||||||||||||    
T  45489421 ctcttacttatatggtgttcaacctttactcttttatccgatgtga 45489466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 3341203 - 3341123
Alignment:
Q  33 ttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    ||||| ||||||||||||||||  |||| |||||||||| || ||||| |||||   |||||| || || |||||||||||    
T  3341203 ttatgggtcctcttacttataaagtgtttaacctttactcttttatccaatgtgggacatataactcacacttgcacacaa 3341123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 20826319 - 20826239
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||| ||||  ||| ||| ||| ||||||| || |||||||||||||  |||||||| |||||| || |||||||||||    
T  20826319 cttacctaaaatgttaaggctatgggtttatgggttctcttacttataacgtgttcaacttttactattttatccgatgtg 20826239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 44620362 - 44620318
Alignment:
Q  42 ctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||||| ||||||||||||||| || ||||| |||||    
T  44620362 ctcttacttataaggtgttcaacctttactattttatcccatgtg 44620318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 6e-31; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 28254293 - 28254373
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  28254293 cttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataagatgttcaacctttacttttctatccgatgtg 28254373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 15880365 - 15880258
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || ||||||||||| | |||||| || || |||    
T  15880365 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtggaacatataactcacactt 15880266  T
Q  106 gcacacaa 113  Q
    | ||||||    
T  15880265 gtacacaa 15880258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 28531370 - 28531477
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||  ||| ||||||||||||||| | ||||||||||||||| |||||||||||| |||||||||||||||||   |||||| || || |||    
T  28531370 cttacccaaaatcttaaggcaatgagtttatgggacctcttacttataaggtgttcaacctttgcttttctatccgatgtgggacatataactcacactt 28531469  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  28531470 gcacacaa 28531477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 28254168 - 28254249
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    ||||||| |||||||| ||||| | ||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  28254168 cttaccctaaactttaaggcaaagtgtttatgagtcctcttacttataaagtgttcaacctttacttttctatccgatgtga 28254249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 962700 - 962620
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| | ||||| ||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  962700 cttacccaaaaccttaagacaatgggtttatgggtcctctcacttataaggtgttcaacctttacttttctatccgatgtg 962620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 6421487 - 6421407
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| | | ||||||||||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  6421487 cttacccaaaacctcaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtg 6421407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 36178661 - 36178741
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  36178661 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtg 36178741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 41283531 - 41283608
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgat 83  Q
    |||||| ||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| || ||||||||    
T  41283531 cttacctaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccgat 41283608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 14745723 - 14745803
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || ||||| |||||    
T  14745723 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatgtg 14745803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 37106290 - 37106210
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| || |||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  37106290 cttacccaaaaccttaaggaaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtg 37106210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 7598330 - 7598251
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    |||||||||||| ||| ||| ||||||||||| ||||||||| ||||||| |||| ||||||||||||||||| ||||||    
T  7598330 cttacccaaaaccttaaggctatgagtttatgggtcctcttatttataaggtgttgaacctttacttttctattcgatgt 7598251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 36005937 - 36006015
Alignment:
Q  7 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||||||| ||| ||||||||||||||| ||||||||||||||||| |||||||| ||||| ||||||| |||||||    
T  36005937 ttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacttttac-tttctattcgatgtg 36006015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 42514751 - 42514672
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    |||||||||||  ||| ||| ||| ||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||    
T  42514751 cttacccaaaatcttaaggcgatgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatctgatgt 42514672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 31899499 - 31899589
Alignment:
Q  23 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    ||||||||||||||| ||||||||||||||||| |||||||| |||||| || ||||||||||| | |||||| || || ||| |||||||    
T  31899499 ggcaatgagtttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatataactcacactttcacacaa 31899589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 37106026 - 37105946
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||  ||| ||||||||||||||| |||| |||||||||||| ||||||||||||||| || ||| |||||||    
T  37106026 cttacccaaaatcttaaggcaatgagtttatgggtccccttacttataaggtgttcaacctttactattttattcgatgtg 37105946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 30313279 - 30313173
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||  ||| |||||||||||| || ||||||| ||||||||| ||||||||||  |||||||||||||||||||  |||||| |  || |||    
T  30313279 cttacccaaaatcttaaggcaatgagtttttgggtcctctcacttataag-tgttcaacctccacttttctatccgatgtgagacatataacacacgctt 30313181  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  30313180 gcacacaa 30313173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 33561507 - 33561614
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| | ||||||||||||| ||||||| ||||||||  |||| |||||  ||||||||||| |||||| | |||||| || || |||    
T  33561507 cttacccaaaaccttaagacaatgagtttatgggtcctctcacttataaagtgtttaacctccacttttctatctgatgtggaacatataactcacactt 33561606  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  33561607 gcacacaa 33561614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 31468806 - 31468909
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| ||||||||||||||| |||||    |||||||||| ||||||||||||| || |||||||||||   |||||| || || |||    
T  31468806 cttacccaaaaccttaaggcaatgagtttatgggtcct----cttataagatattcaacctttactattttatccgatgtgggacatataactcacactt 31468901  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  31468902 gcacacaa 31468909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 33731750 - 33731669
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    |||||||||||| ||| ||||||  |||||||  |||||||||||||||| || |||||||||||| || ||||||||||||    
T  33731750 cttacccaaaaccttaaggcaataggtttatggatcctcttacttataaggtgctcaacctttactcttttatccgatgtga 33731669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 40679685 - 40679762
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgat 83  Q
    |||||||||||  ||| ||| ||| ||||||| || |||||||||||||| ||||||||| |||||||||||||||||    
T  40679685 cttacccaaaatcttaaggcgatgggtttatgggttctcttacttataaggtgttcaacccttacttttctatccgat 40679762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 27 - 111
Target Start/End: Complemental strand, 1769973 - 1769889
Alignment:
Q  27 atgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacac 111  Q
    ||||||||||| ||||||||||||||||| |||||||| |||||| || |||||||||||   |||||| || || |||||||||    
T  1769973 atgagtttatgagtcctcttacttataaggtgttcaacttttactcttttatccgatgtgtgacatataactcacacttgcacac 1769889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 14745350 - 14745430
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||| ||||||| |||||| |||||| ||||||||||||| ||||| || ||| |||||||    
T  14745350 cttacccaaaaccttaaggcaatgggtttatgggtcctcatacttacaagatgttcaaccattactattttattcgatgtg 14745430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 16542551 - 16542471
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||| |||||  ||| ||||||||||||||  ||||||||| ||||||| ||||||||||||||| || |||||||||||    
T  16542551 cttactcaaaatcttaaggcaatgagtttataagtcctcttatttataaggtgttcaacctttactattttatccgatgtg 16542471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 29873593 - 29873673
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||| |||||| ||| ||||||||||||||| ||||||  |||||||| |||||||||||  ||||||||||| ||||||    
T  29873593 cttactcaaaaccttaaggcaatgagtttatgagtcctcccacttataaaatgttcaacctccacttttctatctgatgtg 29873673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 36178227 - 36178307
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||  ||| ||||||| ||||||| || | |||||||||||| ||||||||||||||| || |||||||||||    
T  36178227 cttacccaaaatcttaaggcaatgggtttatgggttcccttacttataaggtgttcaacctttactattttatccgatgtg 36178307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 37895117 - 37895197
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||| |||||||||| || |||||| |||| | |||||| |||| ||||||||||||||||    
T  37895117 cttacccaaaaccttaaggcaatgggtttatgtgttcttttacttttaaggttttcaacttttatttttctatccgatgtg 37895197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 35580780 - 35580886
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| ||||||| ||||||| ||||||| ||||||||| |||||||| |||| | || |||||||||||   |||||| || || |||    
T  35580780 cttacccaaaaccttaaggcaatgggtttatg-gtcctctcacttataaggtgttcaacatttattgttttatccgatgtgggacatataactcacactt 35580878  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  35580879 gcacacaa 35580886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 38796676 - 38796783
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| |||| |  ||||||| ||||||||||||||||| ||||||||||||| | || |||| ||||||   |||||| || || |||    
T  38796676 cttacccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaacctttattgttttatcagatgtgggacatataactcacactt 38796775  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  38796776 gcacacaa 38796783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 40163466 - 40163509
Alignment:
Q  43 tcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  40163466 tcttacttataaggtgttcaacctttacttttctatccgatgtg 40163509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 33 - 111
Target Start/End: Complemental strand, 7598684 - 7598606
Alignment:
Q  33 ttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacac 111  Q
    ||||| ||||||||||||||||| |||||||||||||||||| |||| ||||||   |||||| || || |||||||||    
T  7598684 ttatgggtcctcttacttataaggtgttcaacctttacttttttatctgatgtgggacatataactcacacttgcacac 7598606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 12529091 - 12529149
Alignment:
Q  13 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 71  Q
    ||||||||| ||||||||||||||| ||||||||||||||| | ||||||| |||||||    
T  12529091 aaaactttaaggcaatgagtttatgagtcctcttacttatacggtgttcaatctttact 12529149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 5542681 - 5542746
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 71  Q
    |||||| ||||| ||| ||||||  ||||||| ||||||||||||||||| |||||||||||||||    
T  5542681 cttaccaaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttact 5542746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 115
Target Start/End: Complemental strand, 40733619 - 40733510
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||||||| ||   |  ||||||| ||||||||||||||||| |||||||| ||||||||| |||| ||||||   |||||| || || |||    
T  40733619 cttacccaaaactttaaggttgtaggtttatgggtcctcttacttataaggtgttcaacatttacttttttatctgatgtgggacatataactcacactt 40733520  T
Q  106 gcacacaata 115  Q
    | ||||||||    
T  40733519 gtacacaata 40733510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 5543054 - 5543134
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||  ||| ||||||  |||||||  |||||||||||||||| ||||||||||||||| || |||| ||||||    
T  5543054 cttacccaaaatcttaaggcaataggtttatggatcctcttacttataaggtgttcaacctttactattttatcggatgtg 5543134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 6422212 - 6422132
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||| ||||| ||| ||| ||| ||||||| ||||||||| ||||||  |||||||||||||||||| |||| ||||||    
T  6422212 cttacctaaaaccttaaggctatgggtttatgggtcctcttaattataatgtgttcaacctttacttttttatctgatgtg 6422132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 6713053 - 6712997
Alignment:
Q  31 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    ||||||| ||||||||||||||||| |||||||| |||||| || ||||||||||||    
T  6713053 gtttatgggtcctcttacttataaggtgttcaacatttactgttttatccgatgtga 6712997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 15511551 - 15511631
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||  ||| | ||||| ||||||| ||||||||||||||||  ||||||||||||||| || |||||| ||||    
T  15511551 cttacccaaaatcttaagacaatgggtttatgggtcctcttacttataacgtgttcaacctttactcttttatccgttgtg 15511631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 36178325 - 36178401
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccga 82  Q
    |||||||||||| ||| | ||||| ||||||| |||| |||||||||||| ||||| ||||||||| || |||||||    
T  36178325 cttacccaaaaccttaagacaatgggtttatgagtccccttacttataaggtgttccacctttactattttatccga 36178401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 38796307 - 38796381
Alignment:
Q  39 gtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    ||||||||||||||||| |||||||| |||||| || |||||||||||   |||||| || || |||||||||||    
T  38796307 gtcctcttacttataaggtgttcaacatttactgttttatccgatgtgggacatataactcacacttgcacacaa 38796381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 9231351 - 9231278
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatc 79  Q
    |||| ||||||||||| |||  || ||| |||  |||||||| |||||| ||||||||||||||||||||||||    
T  9231351 cttaaccaaaactttaaggcggtgggttgatggatcctcttatttataatatgttcaacctttacttttctatc 9231278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 23346338 - 23346258
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    |||||| ||||| ||| ||| ||| ||||||| | ||||||| ||||||| |||| ||||||||||||||||| ||||||||    
T  23346338 cttaccgaaaaccttaaggctatgggtttatgggccctctta-ttataaggtgtttaacctttacttttctatacgatgtga 23346258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 42515078 - 42515038
Alignment:
Q  46 tacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||| |||| |||||||||||||||||||||||||    
T  42515078 tacttataaggtgtttaacctttacttttctatccgatgtg 42515038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 37632653 - 37632732
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    |||||||||||| |||  |  ||| ||||||| |||||||||||||||| ||||  |||||||||| || ||||||||||    
T  37632653 cttacccaaaaccttaaagttatgggtttatgggtcctcttacttataaaatgtcaaacctttactattttatccgatgt 37632732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 31259672 - 31259750
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatg 84  Q
    |||||||||||| ||| ||  ||  ||||||| ||| ||||||||||||| |||| |||||||||| || |||||||||    
T  31259672 cttacccaaaaccttaaggtgataggtttatgggtcatcttacttataaggtgttgaacctttactcttttatccgatg 31259750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 12910330 - 12910241
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatata 95  Q
    |||||||||||| ||| | |||||| |||||  ||| | | |||||||||  ||||||||| |||||||| |||||||||| | ||||||    
T  12910330 cttacccaaaaccttaagacaatgaatttataagtcatttcacttataaggggttcaacctgtacttttccatccgatgtggaacatata 12910241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 30323566 - 30323493
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatc 79  Q
    |||||||||||| ||| ||||||||||||||  ||||||| |||| |||  ||||||||||  | |||||||||    
T  30323566 cttacccaaaaccttaaggcaatgagtttataggtcctctcacttctaaagtgttcaacctccaattttctatc 30323493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 29676620 - 29676556
Alignment:
Q  23 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    ||||||||||||||| || |||| ||||||||  ||||||| ||||||| || ||||| ||||||    
T  29676620 ggcaatgagtttatgggttctctcacttataatgtgttcaatctttactcttttatccaatgtga 29676556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 29874079 - 29874159
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||| ||||||| ||| ||||||| ||||||| ||||||  | ||||||  ||||||||||  ||||||||||| ||||||    
T  29874079 cttatccaaaaccttaaggcaatgggtttatgggtcctcccaattataaagtgttcaacctccacttttctatctgatgtg 29874159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 33953827 - 33953907
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||||||| |||| |||||   ||||||| ||||||| |||||||   ||||||||||  ||||||||||| ||||||    
T  33953827 cttacccaaaattttaaggcaacaggtttatgggtcctctcacttatatagtgttcaacctccacttttctatctgatgtg 33953907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 1e-28; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 10074419 - 10074499
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10074419 cttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtg 10074499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 10074048 - 10074154
Alignment:
Q  7 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttg 106  Q
    ||||||||||| ||| ||||||| ||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||    ||||| || |||||||    
T  10074048 ttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacgtttacttttctatccgatgtgggatatataactcacccttg 10074147  T
Q  107 cacacaa 113  Q
    |||||||    
T  10074148 cacacaa 10074154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 16107780 - 16107673
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| |||| ||||||||||||| ||||||||||||  |||||| || || |||    
T  16107780 cttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgtttaacctttacttttttatccgatgtgacacatataactcacactt 16107681  T
Q  106 gcacacaa 113  Q
    | ||||||    
T  16107680 gtacacaa 16107673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 3409361 - 3409281
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| || |||| ||||||    
T  3409361 cttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtg 3409281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 9062407 - 9062485
Alignment:
Q  7 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||||||||| ||  ||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||||    
T  9062407 ttacccaaaacttaaga-caatgagtttatgagtcctcttacttataagatgttcaacctttactattttatccgatgtg 9062485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 10911662 - 10911600
Alignment:
Q  12 caaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttactttt 74  Q
    |||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  10911662 caaaactttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactttt 10911600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 35210306 - 35210204
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| |||||||  |||||| ||||||||||||||||| ||||||||||||||| || ||||||||||||  |||||| || || |||    
T  35210306 cttacccaaaaccttaaggcaatggttttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacactt 35210207  T
Q  106 gca 108  Q
    |||    
T  35210206 gca 35210204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 2377856 - 2377776
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || || ||||||||    
T  2377856 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgatgtg 2377776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 14748394 - 14748474
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| |||  |||||||||||||| ||||||||| ||||||| ||||||||||||||| || |||||||||||    
T  14748394 cttacccaaaaccttaacgcaatgagtttatgggtcctcttatttataaggtgttcaacctttactattttatccgatgtg 14748474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 29518605 - 29518525
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| || |||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  29518605 cttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtg 29518525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 29519022 - 29518942
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| || |||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  29519022 cttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtg 29518942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 32460636 - 32460716
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || ||| |||||||    
T  32460636 cttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatacgatgtg 32460716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 32741281 - 32741201
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| || |||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  32741281 cttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtg 32741201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 2843657 - 2843567
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtg-tcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatata 95  Q
    |||||||||||| ||| ||||||||||||||| | |||||||||||||||| |||||||| |||| | || ||||||||||||| ||||||    
T  2843657 cttacccaaaaccttaaggcaatgagtttatggggtcctcttacttataaggtgttcaacttttattattttatccgatgtgaaacatata 2843567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 1127462 - 1127382
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| || |||| ||||||| ||||||||||||||||| ||||||||||||||| || || ||||||||    
T  1127462 cttacccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttacccgatgtg 1127382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 2378228 - 2378148
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||| ||||| ||| || |||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  2378228 cttacctaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtg 2378148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 3058328 - 3058248
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||| |||||||  ||||| |||||||||| ||||||||||||||| || |||||||||||    
T  3058328 cttacccaaaaccttaaggcaatgggtttatggatcctcatacttataaggtgttcaacctttactattttatccgatgtg 3058248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 10073672 - 10073777
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||  ||| | |||||||||||||  |||||||||||||||| |||||||||||||||||||  |||||||||   |||||| || || |||    
T  10073672 cttacccaaaatcttaagccaatgagtttatggatcctcttacttataaggtgttcaacctttacttttc--tccgatgtgggacatataactaacactt 10073769  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  10073770 gcacacaa 10073777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 593766 - 593845
Alignment:
Q  7 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||||||| ||| |||| |  ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  593766 ttacccaaaaccttaaggcagtcggtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtg 593845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 2579928 - 2580035
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| |||  || ||||||| ||||||||||||||||  ||||||||||||||| || |||||||||||   |||||| || || |||    
T  2579928 cttacccaaaaccttaaggctgtgggtttatgggtcctcttacttataatgtgttcaacctttactcttttatccgatgtgggacatataactcacactt 2580027  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  2580028 gcacacaa 2580035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 5958663 - 5958738
Alignment:
Q  10 cccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    |||||||||||| | ||||||||||||| || |||||| ||||||| ||||||||||||||| || ||||||||||    
T  5958663 cccaaaactttaagacaatgagtttatgagttctcttatttataaggtgttcaacctttactgttttatccgatgt 5958738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 1846850 - 1846769
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    |||| ||||||| ||| |||||||  |||||| || |||||||||||||| ||||||||||||||| || ||||||||||||    
T  1846850 cttatccaaaaccttaaggcaatggatttatgggtgctcttacttataaggtgttcaacctttactattttatccgatgtga 1846769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 3409762 - 3409682
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||  | | ||||||| ||||||| |||||||||||||||||||||||||| |||||| || |||| ||||||    
T  3409762 cttacccaaaaaataaaggcaatgggtttatgggtcctcttacttataagatgttcaacttttactattttatctgatgtg 3409682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 16455009 - 16454929
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||  ||||||| ||||| ||||||||||| ||||||||||||||| || |||| ||||||    
T  16455009 cttacccaaaaccttaaggcaataggtttatgggtcctattacttataaggtgttcaacctttactcttttatctgatgtg 16454929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 2578499 - 2578574
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccg 81  Q
    |||||||||||| ||| ||| ||| ||||||| ||||||||||||||||  ||||||||||||||| || ||||||    
T  2578499 cttacccaaaaccttaaggctatgggtttatgggtcctcttacttataaagtgttcaacctttactcttttatccg 2578574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 2579549 - 2579628
Alignment:
Q  7 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||||||| ||| ||||||||||||||| | ||||||||||||||| | | | |||||||||||| | |||||||||    
T  2579549 ttacccaaaaccttaaggcaatgagtttatgggccctcttacttataaggtatccgacctttacttttttgtccgatgtg 2579628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 16108148 - 16108058
Alignment:
Q  23 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    ||||||| ||||||| ||||||||||||||||| |||||||| |||||| || |||| |||||| | |||||| || || |||| ||||||    
T  16108148 ggcaatgggtttatgggtcctcttacttataaggtgttcaacatttactcttttatctgatgtggaacatataactcacacttgtacacaa 16108058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 3415560 - 3415495
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 71  Q
    |||||| ||||| ||| ||||||| ||||||| ||||||||||||||| | |||||||||||||||    
T  3415560 cttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttatatggtgttcaacctttact 3415495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 12092538 - 12092618
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||| |||||| ||| |||||||||||||||  |||||| ||||||||  || |||||||  ||||||||||||||||||    
T  12092538 cttactcaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgctcaacctccacttttctatccgatgtg 12092618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 26544151 - 26544071
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||| |||||| ||| |||  || ||||||| ||||||||||||||||  ||||||||||||||| || |||||||||||    
T  26544151 cttactcaaaaccttaaggcggtgggtttatgggtcctcttacttataacgtgttcaacctttactattttatccgatgtg 26544071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 2578891 - 2578968
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatg 84  Q
    |||||||||||| ||| || ||||||||||||  |||||||| ||||||| | |||||| ||||||||| |||||||||    
T  2578891 cttacccaaaaccttaaggtaatgagtttatggatcctcttatttataaggtattcaacatttactttt-tatccgatg 2578968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 5832108 - 5832162
Alignment:
Q  32 tttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||| ||||||||||||||||| ||||||||||||||| || ||||| |||||    
T  5832108 tttatgggtcctcttacttataaggtgttcaacctttactcttttatccaatgtg 5832162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 16454677 - 16454597
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||| ||||||  ||| ||||||| ||||||| ||||||||||||||||| |||||||| |||| | || |||| ||||||    
T  16454677 cttatccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacttttattcttttatctgatgtg 16454597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 8482028 - 8481922
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||  ||| ||||||||||||||| ||| ||| | ||||||  ||||||||||  |||||| |||| |||||| | |||||| || || |||    
T  8482028 cttacccaaaatcttaaggcaatgagtttatgagtcatctcatttataaagtgttcaacctccacttttatatctgatgtgga-catataactcacactt 8481930  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  8481929 gcacacaa 8481922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 1950275 - 1950321
Alignment:
Q  40 tcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||||||| |||| ||||||||||||||| || |||||||||||    
T  1950275 tcctcttacttgtaaggtgttcaacctttactcttttatccgatgtg 1950321  T

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Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 14789285 - 14789327
Alignment:
Q  31 gtttatgtgtcctcttacttataagatgttcaacctttacttt 73  Q
    ||||||| |||||||||||| |||| |||||||||||||||||    
T  14789285 gtttatgggtcctcttacttgtaaggtgttcaacctttacttt 14789327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 17135144 - 17135206
Alignment:
Q  25 caatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    |||||||||||||  ||||||| |||||||| | || ||| ||||||| ||||||||||||||    
T  17135144 caatgagtttatgaatcctcttgcttataaggtattaaacatttacttctctatccgatgtga 17135206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 33605705 - 33605649
Alignment:
Q  57 tgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    ||||||||||  ||||||||||| |||||||  ||||||||| || |||||||||||    
T  33605705 tgttcaacctccacttttctatctgatgtgagacatatagctcacacttgcacacaa 33605649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 41632884 - 41632777
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||  |||  ||| || ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||  |||||| ||||| |||    
T  41632884 cttacccaaaatcttaaagcattgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgagacatataacttacactt 41632785  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  41632784 gcacacaa 41632777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 41170736 - 41170656
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| || |||||||||||    
T  41170736 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtg 41170656  T

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Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 26075219 - 26075299
Alignment:
Q  7 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    ||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || ||||||||||||    
T  26075219 ttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtga 26075299  T

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Target: chr5; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 26074714 - 26074607
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||| || | |||||| || || |||    
T  26074714 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatatggaacatataactcacactt 26074615  T
Q  106 gcacacaa 113  Q
    | ||||||    
T  26074614 gtacacaa 26074607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 9498710 - 9498791
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    |||||||||||  ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  9498710 cttacccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattctatctgatgtga 9498791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 42508707 - 42508634
Alignment:
Q  13 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||| ||| ||||||| ||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  42508707 aaaaccttaaggcaatgggtttatgagtcctcttacttattagatgtttaacctttacttttctatccgatgtg 42508634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 18603176 - 18603256
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||| ||||||    
T  18603176 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtg 18603256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 26074202 - 26074309
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| ||||||| ||| ||| |||||||||| ||| || |||||||||||||||||| |||||||||||   |||||| || || |||    
T  26074202 cttacccaaaaccttaaggcaatgggttcatgggtcctcttacatatgaggtgttcaacctttacttttttatccgatgtgtgacatataactcacactt 26074301  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  26074302 gcacacaa 26074309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 40296371 - 40296477
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| | | ||||||| ||||||| ||||||||||||||||| |||||||||||| || || |||||||||||   |||||| || || |||    
T  40296371 cttacccaaaacctcaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttctattttatccgatgtgggacatataactcacactt 40296470  T
Q  106 gcacaca 112  Q
    |||||||    
T  40296471 gcacaca 40296477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 11417033 - 11417122
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatata 95  Q
    ||||| |||||| ||| ||||||| |||||||  |||||||||||||||| ||||||||||||||| || ||||||||||| | ||||||    
T  11417033 cttacacaaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatata 11417122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 299591 - 299511
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||| |||||| ||| ||| ||||||||||| ||| ||||||||||||| ||||||||||||||| || |||||||||||    
T  299591 cttacacaaaaccttaaggctatgagtttatgggtcatcttacttataaggtgttcaacctttactgttttatccgatgtg 299511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 95
Target Start/End: Original strand, 3295405 - 3295489
Alignment:
Q  11 ccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatata 95  Q
    ||||||| ||| ||||||  ||||||| ||||||||||||||||| ||||||||||||||| || ||||||||||| | ||||||    
T  3295405 ccaaaaccttaaggcaattggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatata 3295489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 6224298 - 6224222
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccga 82  Q
    |||||| ||||| ||| ||| ||||||||||| ||||||||||||||||| ||||||||||||||| || |||||||    
T  6224298 cttaccaaaaaccttaaggcgatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccga 6224222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 6500552 - 6500472
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||| |||||   ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  6500552 cttacccaaaaccttaaggcaatgggtttaaaggtcctcttacttataaggtgttcaacctttactattttatccgatgtg 6500472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 6500924 - 6500844
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||| ||||||| ||| ||||||||||||||| ||||| ||| ||||||| ||||||||||||||| || |||||||||||    
T  6500924 cttatccaaaaccttaaggcaatgagtttatgggtccttttatttataaggtgttcaacctttactattttatccgatgtg 6500844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 32487495 - 32487416
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||| ||||||| |||||||||||||| || ||||||||||||||| || |||||||||||    
T  32487495 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttat-aggtgttcaacctttactattttatccgatgtg 32487416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 34753081 - 34753161
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||  ||||||| ||| ||||||||||||| |||||||| ||||||||||||||| |||||    
T  34753081 cttacccaaaaccttaaggcaatcggtttatgggtcttcttacttataaggtgttcaacttttacttttctatccaatgtg 34753161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 13415816 - 13415923
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| || |||  ||||||| ||||||||||||||||| |||||||||||||||  | |||||||||||   |||||| || || |||    
T  13415816 cttacccaaaaccttaaggtaataggtttatgggtcctcttacttataaggtgttcaacctttactaatttatccgatgtgggacatataactcacactt 13415915  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  13415916 gcacacaa 13415923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 15370201 - 15370094
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| |||  ||  |||||| ||||||||||||||||||||||||||||||||| || ||| |||||||   |||||| || || |||    
T  15370201 cttacccaaaaccttaaggctgtggatttatgggtcctcttacttataagatgttcaacctttactattttattcgatgtgggacatataactcacactt 15370102  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  15370101 gcacacaa 15370094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 36568623 - 36568730
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||| ||||| ||| ||||||| ||||| | ||| ||| ||||||||| |||||||| |||||||||||||||||||||   |||||| || || |||    
T  36568623 cttaccaaaaaccttaaggcaatgggtttacgggtcatctcacttataaggtgttcaacttttacttttctatccgatgtgggacatataactcacactt 36568722  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  36568723 gcacacaa 36568730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 3295073 - 3295151
Alignment:
Q  8 tacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||| | | ||||||| ||||||| ||| ||||||||||||| ||||||||||||||| || |||||||||||    
T  3295073 tacccaaaacctcaaggcaatgggtttatgggtcttcttacttataaggtgttcaacctttactattttatccgatgtg 3295151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 31509708 - 31509618
Alignment:
Q  23 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    ||||||||||||||| ||||||| ||||||||  || |||||||  |||||||||||||||||||  |||||| || || |||||||||||    
T  31509708 ggcaatgagtttatgagtcctctcacttataaagtgctcaacctccacttttctatccgatgtgagacatataactcacacttgcacacaa 31509618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 1028598 - 1028653
Alignment:
Q  31 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||| ||||||||||||||||  |||||| |||||||||||||||||||||||    
T  1028598 gtttatgggtcctcttacttataaagtgttcatcctttacttttctatccgatgtg 1028653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 2411109 - 2411030
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    ||||| |||||| ||| |||||| |||||||| || |||||||||| |||||||||||| ||||||| ||||||| ||||    
T  2411109 cttactcaaaaccttaaggcaataagtttatgggttctcttacttacaagatgttcaacttttacttctctatccaatgt 2411030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 25328037 - 25327958
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    |||||||||||| ||| |||| |  ||||||| ||||||||||||||||| |||||||| |||||| || ||||||||||    
T  25328037 cttacccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaacttttactgttttatccgatgt 25327958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 26590966 - 26591035
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttc 75  Q
    ||||| |||||| ||| |||| ||| ||||||  |||||||||||||||| |||||||||||||||||||    
T  26590966 cttactcaaaaccttaaggcattgaatttatggatcctcttacttataaggtgttcaacctttacttttc 26591035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 31509816 - 31509752
Alignment:
Q  23 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    ||||||||||||||| ||||||| ||||||||  || |||||||  |||||||||||||||||||    
T  31509816 ggcaatgagtttatgagtcctctcacttataaagtgctcaacctccacttttctatccgatgtga 31509752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 35150107 - 35150000
Alignment:
Q  7 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttg 106  Q
    ||||||||||| ||| | |||||  |||||| ||| ||||||||||||| ||||||||||| ||| || |||||||||||   |||||| || || ||||    
T  35150107 ttacccaaaaccttaagacaatggatttatgggtc-tcttacttataaggtgttcaaccttgactcttttatccgatgtgggacatataactcacacttg 35150009  T
Q  107 cacacaata 115  Q
    |||||||||    
T  35150008 cacacaata 35150000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 35914939 - 35914871
Alignment:
Q  18 tttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||||||||  |||| | ||| |||||||||||| |||||||||||||||| || |||||||||||    
T  35914939 tttagggcaatggatttacgggtcttcttacttataaaatgttcaacctttactcttttatccgatgtg 35914871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 36492293 - 36492353
Alignment:
Q  26 aatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||| ||||||  ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  36492293 aatgtgtttattggtcctcttacttataaggtgttcaacctttactcttttatccgatgtg 36492353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 46 - 86
Target Start/End: Complemental strand, 38427610 - 38427570
Alignment:
Q  46 tacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  38427610 tacttataagatgttcaacctttacttttctatccaatgtg 38427570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 12662708 - 12662815
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||  ||| | |||||  |||||| ||  |||||||||||| |||||||||||||||| || |||||||||||   |||||| || || |||    
T  12662708 cttacccaaaaacttaagacaatggatttatgggttttcttacttataaaatgttcaacctttactattttatccgatgtgggacatataactcacactt 12662807  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  12662808 gcacacaa 12662815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 26074395 - 26074340
Alignment:
Q  31 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||| ||||||||||||||||| ||||||| ||||| ||||||||| ||||||    
T  26074395 gtttatgggtcctcttacttataaggtgttcaatctttagttttctatctgatgtg 26074340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 42405652 - 42405731
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    |||||||||||| ||| |||| |  ||||||| ||||| |||||| |||| ||||||||||||||| || ||||||||||    
T  42405652 cttacccaaaaccttaaggcattaggtttatgagtccttttacttgtaaggtgttcaacctttactattttatccgatgt 42405731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 42524792 - 42524738
Alignment:
Q  32 tttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    |||||| ||||||||| | |||||||||||||| ||||||||||||||||||||||    
T  42524792 tttatgagtcctcttattcataagatgttcaac-tttacttttctatccgatgtga 42524738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 15370504 - 15370439
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 71  Q
    ||||| |||||| ||| ||| ||| ||||||| ||||||||||||||||| |||||||| ||||||    
T  15370504 cttacgcaaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttcaacatttact 15370439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 33747873 - 33747793
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||| ||||||  ||| |||||||||||||||  |||||||||||||||  | || |||||||||| || |||||||||||    
T  33747873 cttatccaaaatcttaaggcaatgagtttatggatcctcttacttataaagtatttaacctttactattttatccgatgtg 33747793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 26074839 - 26074918
Alignment:
Q  7 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||||||| ||| | ||||  ||||||| |||||| ||||||||   ||||||||||||||| || |||||||||||    
T  26074839 ttacccaaaaccttaagacaataggtttatgggtcctcctacttatattgtgttcaacctttactcttttatccgatgtg 26074918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 27502117 - 27502172
Alignment:
Q  31 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||| ||||||||||||||||| |||| |||||||||| || ||||| |||||    
T  27502117 gtttatgggtcctcttacttataaggtgtttaacctttactattttatccaatgtg 27502172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 624298 - 624233
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 71  Q
    |||||||||||| | | ||| ||| ||||||| ||| ||||||||||||  |||||||||||||||    
T  624298 cttacccaaaacctcaaggctatgggtttatgggtcatcttacttataacgtgttcaacctttact 624233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 19275630 - 19275558
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatc 79  Q
    |||||||||||  ||| | |||||| |||||| ||| |||| |||||||| |||||||||| ||||||||||||    
T  19275630 cttacccaaaatcttaagacaatgaatttatgggtcttcttccttataag-tgttcaacctctacttttctatc 19275558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 7768925 - 7768873
Alignment:
Q  33 ttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    ||||| ||||| ||||||||||| ||||||||||||| | || ||||||||||    
T  7768925 ttatgggtccttttacttataaggtgttcaacctttattattttatccgatgt 7768873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 12114618 - 12114725
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| | ||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    ||||| ||||| |||    
T  12114618 cttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtgggatatataacttacactt 12114717  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  12114718 gcacacaa 12114725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 21832399 - 21832479
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||    
T  21832399 cttacccaaaaccttaaggctatgagtttatgagtcctcttacttataaggtgttcaacctttacttttctatccaatgtg 21832479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 15773294 - 15773187
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||| |||||| || ||| |||||||   |||||| || || |||    
T  15773294 cttacccaaaactttaaggcaatgagcttatgagtcctcttacttataagatgttcaacttttactcttttattcgatgtgggacatataactcacactt 15773195  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  15773194 gcacacaa 15773187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 37990695 - 37990802
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||||||| |||||||| |||||| || ||||||||||| | |||||| || || |||    
T  37990695 cttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatataactcacactt 37990794  T
Q  106 gcacacaa 113  Q
    | ||||||    
T  37990795 gtacacaa 37990802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 29644958 - 29645065
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| | ||||| ||||||| ||||||||||||||||| |||| |||||||||| || |||||||||||   |||||| ||||| |||    
T  29644958 cttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgtttaacctttactcttttatccgatgtgggacatataacttacactt 29645057  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  29645058 gcacacaa 29645065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 22304671 - 22304569
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| | ||||||||||||| || |||||||||||   ||||||||| || |||    
T  22304671 cttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtattcaacctttactattttatccgatgtgggacatatagctcacactt 22304572  T
Q  106 gca 108  Q
    |||    
T  22304571 gca 22304569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 49336743 - 49336824
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    |||||||| ||||||| | | ||| ||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||    
T  49336743 cttacccagaactttaagactatgggtttatgggtcctcttacttataaggtggtcaacctttacttttctatccgatgtga 49336824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 41359821 - 41359901
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| | ||||||||||||| || |||||||||||    
T  41359821 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactattgtatccgatgtg 41359901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 43346847 - 43346927
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||||||||||| || |||||||||||||| ||||||||||||||| || |||| ||||||    
T  43346847 cttacccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtgttcaacctttactattttatctgatgtg 43346927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 25739481 - 25739588
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| | |  |||||||||||||| ||||||||||||||| |||||||||| |||||| || |||||||||||   |||||| || || |||    
T  25739481 cttacccaaaacctaaaagcaatgagtttatgggtcctcttacttatatgatgttcaacttttactattttatccgatgtgggacatataactcacactt 25739580  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  25739581 gcacacaa 25739588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 35946623 - 35946544
Alignment:
Q  7 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||||||| ||| ||||| | ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  35946623 ttacccaaaaccttaaggcaacgggtttatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtg 35946544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 37991033 - 37991140
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| ||| ||||||||||  ||||||||||||||||| ||||||||||||||| || ||||| ||||||  |||||| || || |||    
T  37991033 cttacccaaaaccttaaggcgatgagtttataggtcctcttacttataaggtgttcaacctttactattttatccaatgtgagacatataactcacactt 37991132  T
Q  106 gcacacaa 113  Q
    | ||||||    
T  37991133 gtacacaa 37991140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 39935011 - 39935090
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    ||||| |||||||||| ||||||| |||||||  |||||||||||||||| ||||||||||||||| || ||||||||||    
T  39935011 cttactcaaaactttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactcttttatccgatgt 39935090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 33175717 - 33175827
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttat---gtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacc 102  Q
    |||||||||||| ||| ||| ||||||||||   | || |||||||||||||| ||||||||||||||||||||||| |||||||  |||||| || ||     
T  33175717 cttacccaaaaccttaaggctatgagtttattatgggttctcttacttataaggtgttcaacctttacttttctatctgatgtgagacatataactcaca 33175816  T
Q  103 cttgcacacaa 113  Q
    |||| ||||||    
T  33175817 cttgtacacaa 33175827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 51886645 - 51886561
Alignment:
Q  24 gcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgca 108  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||| || ||| ||||||||  |||||| || || ||||||    
T  51886645 gcaatgagtttatgggtcctcttacttatatgatgttcaacctttactattttattcgatgtgagacatataactcacacttgca 51886561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 29644637 - 29644744
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| | ||||| ||||||| || |||||||||||||| ||||||||||||||| ||  ||||||||||   |||||| || || |||    
T  29644637 cttacccaaaaccttaagacaatgggtttatgggttctcttacttataaggtgttcaacctttactctttaatccgatgtgggacatataactcacactt 29644736  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  29644737 gcacacaa 29644744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 32589805 - 32589742
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaaccttta 69  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| |||||||||||||    
T  32589805 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttta 32589742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 25755495 - 25755389
Alignment:
Q  7 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttg 106  Q
    ||||||| ||||||||| |||||  |||||| ||||||||||||||||| | ||||||||||||| || |||| |||||||  |||||| || || ||||    
T  25755495 ttacccacaactttaggacaatggatttatgagtcctcttacttataaggtattcaacctttactcttttatctgatgtgagacatataactcacacttg 25755396  T
Q  107 cacacaa 113  Q
     ||||||    
T  25755395 tacacaa 25755389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 45901816 - 45901754
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaaccttt 68  Q
    |||||| ||||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||||    
T  45901816 cttaccaaaaactttaaggccatgagtttatgcgtcctcttacttataaggtgttcaaccttt 45901754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 4823757 - 4823676
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    |||||||||||  ||| ||||||||||||||| |||||| |||||||||| |||| ||| |||||| || ||||||||||||    
T  4823757 cttacccaaaatcttaaggcaatgagtttatgggtcctcctacttataaggtgtttaacttttactattttatccgatgtga 4823676  T

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Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 9240225 - 9240144
Alignment:
Q  32 tttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    |||||| ||||||||||||||||| |||||| | ||||||| ||||||||||||| | |||||| || || |||||||||||    
T  9240225 tttatgggtcctcttacttataaggtgttcagcttttacttctctatccgatgtggaacatataactcacacttgcacacaa 9240144  T

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Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 15772956 - 15772879
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgat 83  Q
    |||| ||||||| |||  |||||||||||||| ||||||||||||||||| |||||||| |||||| || ||||||||    
T  15772956 cttatccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacatttactcttttatccgat 15772879  T

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Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 33803308 - 33803388
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||||| || |||  |||||| ||||||| ||||||||||||||| | ||||||||||||||| || |||||||||||    
T  33803308 cttacccaataccttaatgcaatgggtttatgggtcctcttacttatatggtgttcaacctttactattttatccgatgtg 33803388  T

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Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 42342146 - 42342226
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||||||||   || ||| |||||| || |||||||||||    
T  42342146 cttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggcattgaacatttactcttttatccgatgtg 42342226  T

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Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 52634777 - 52634698
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||| ||||||| ||| |||||||||||||  |||||||||||||| || |||||||||||    
T  52634777 cttacccaaaaccttaaggcaatgggtttatgggtc-tcttacttataaggcgttcaacctttactgttttatccgatgtg 52634698  T

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Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 1634370 - 1634477
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacc-tttacttttctatccgatgtgaagcatatagcttaccct 104  Q
    |||||||||||| ||| | ||||| ||||||| ||||||||||||||||  |||| |||| |||| ||||||||||||||||   |||||| || || ||    
T  1634370 cttacccaaaaccttaagccaatgggtttatgggtcctcttacttataatgtgtttaaccttttatttttctatccgatgtgggacatataactcacact 1634469  T
Q  105 tgcacaca 112  Q
    ||||||||    
T  1634470 tgcacaca 1634477  T

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Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 8328006 - 8327899
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| |||| |  ||||||| || |||||||||||||||| |||| |||||||| || |||||||||||   |||||| || || |||    
T  8328006 cttacccaaaaccttaaggcattacgtttatgggttctcttacttataagatattcatcctttactcttttatccgatgtgggacatataactcacactt 8327907  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  8327906 gcacacaa 8327899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 39389172 - 39389093
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    |||||||||||| ||| | ||||| ||||||| ||||||||| || |||| ||||||||||||||| || ||||||||||    
T  39389172 cttacccaaaaccttaagacaatgggtttatgggtcctcttagttttaaggtgttcaacctttactattttatccgatgt 39389093  T

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Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 42342444 - 42342551
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| | |||||  |||||| ||||||||||||||||| |||| |||||||||| || |||| ||||||   |||||| || || |||    
T  42342444 cttacccaaaaccttaagacaatggatttatgggtcctcttacttataaggtgttgaacctttactcttttatcggatgtgggacatataactcacactt 42342543  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  42342544 gcacacaa 42342551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 54017872 - 54017951
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    |||||||||||| ||| |||  |  ||||||| ||||||||||||||||| ||||||||||||||| || ||||||||||    
T  54017872 cttacccaaaaccttaaggcgttaggtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgt 54017951  T

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Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 7767389 - 7767450
Alignment:
Q  25 caatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||| ||||||| ||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  7767389 caatgggtttatgagtcctcttagttataaagtgtccaacctttacttttctatccgatgtg 7767450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 32462956 - 32463037
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacc-tttacttttctatccgatgtg 86  Q
    ||||| |||||| ||| ||||||| ||||||| ||| ||||||||||||| | ||||||| |||||| ||||||||||||||    
T  32462956 cttactcaaaaccttaaggcaatgggtttatgagtcttcttacttataaggtattcaaccttttactcttctatccgatgtg 32463037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 33362345 - 33362425
Alignment:
Q  2 cacacttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccga 82  Q
    |||||||||||||||  ||| || |||| ||||||| ||||||||||||||||| | ||||||||||| | || |||||||    
T  33362345 cacacttacccaaaatcttaaggaaatgggtttatgggtcctcttacttataaggtattcaacctttattattttatccga 33362425  T

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Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 42584903 - 42584958
Alignment:
Q  31 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||  |||||||||||||||| ||||||| ||||||| ||||||||||||||    
T  42584903 gtttatggatcctcttacttataaggtgttcaatctttactcttctatccgatgtg 42584958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 45395709 - 45395816
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| | ||||| |||||||  |||||||||||||||  |||| |||||||||| || ||| |||||||    ||||| ||||| |||    
T  45395709 cttacccaaaacattaagacaatgggtttatggatcctcttacttataacgtgtttaacctttactcttttattcgatgtgggatatataacttacactt 45395808  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  45395809 gcacacaa 45395816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 47964971 - 47965078
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||  ||| ||||||| | ||||| | ||||| |||||||  ||||| |||||  ||||||||||||||||| || |||||| || || |||    
T  47964971 cttacccaaaatcttaaggcaatgggcttatgagccctctcacttatataatgtttaacctccacttttctatccgatgtaaaacatataactcacactt 47965070  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  47965071 gcacacaa 47965078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 53577466 - 53577359
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    ||||||||| || ||| ||||||  |||||||  ||| |||| || |||||||||||||||||||| || |||||||||||   |||||| || || |||    
T  53577466 cttacccaagaccttaaggcaatatgtttatggatccacttatttttaagatgttcaacctttactgttttatccgatgtgtgacatataactcacactt 53577367  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  53577366 gcacacaa 53577359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 39914329 - 39914247
Alignment:
Q  31 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    ||||||| ||||||||| ||||||| |||||||||| |||| || |||| |||||||  |||||| || || |||||||||||    
T  39914329 gtttatgggtcctcttatttataaggtgttcaacctctactgttttatctgatgtgagacatataactcacacttgcacacaa 39914247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 50612534 - 50612588
Alignment:
Q  32 tttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||| ||||||||||||||||| ||||||| ||||||| || |||||||||||    
T  50612534 tttatgagtcctcttacttataaggtgttcaatctttactattttatccgatgtg 50612588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 54018254 - 54018332
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatg 84  Q
    |||||||||||| ||| |||  |  ||||||| ||||||||||||||||| ||||||| ||||||| || |||||||||    
T  54018254 cttacccaaaaccttaaggcgttaggtttatgggtcctcttacttataaggtgttcaatctttactcttttatccgatg 54018332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 116
Target Start/End: Original strand, 39336290 - 39336395
Alignment:
Q  11 ccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcaca 110  Q
    ||||||| |||  ||||||||||||||  |||||| ||||||||  ||||||||||  |  |||||||||||||||   |||||| || || ||||||||    
T  39336290 ccaaaaccttaaagcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccgatgtgggacatataactcacacttgcaca 39336389  T
Q  111 caatag 116  Q
    ||||||    
T  39336390 caatag 39336395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 3135129 - 3135209
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||| |||||| ||| |||| || ||||||| || || ||||||||||| |||||||| |||||| || |||||||||||    
T  3135129 cttactcaaaaccttatggcagtgggtttatgggttcttttacttataaggtgttcaacatttactattttatccgatgtg 3135209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 31190091 - 31190039
Alignment:
Q  34 tatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||| ||||||| ||||||||| ||||||||||||||| || |||||||||||    
T  31190091 tatgggtcctctaacttataaggtgttcaacctttactcttttatccgatgtg 31190039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 53118031 - 53118137
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||  ||| ||||||| |||| ||  |||||| ||||||||| ||||||||||||||| || |||||||| || | |||||| || || |||    
T  53118031 cttacccaaaatcttaaggcaatgggttt-tgaatcctctcacttataaggtgttcaacctttactcttttatccgatatggaacatataactcacactt 53118129  T
Q  106 gcacacaa 113  Q
    || |||||    
T  53118130 gcccacaa 53118137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 113
Target Start/End: Original strand, 44160605 - 44160707
Alignment:
Q  11 ccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcaca 110  Q
    ||||||| ||| | ||||| |||||||  |||||||| ||||||| ||||||||||||| | || ||||| || |||| |||||| || || |||||| |    
T  44160605 ccaaaaccttaagacaatgggtttatggatcctcttatttataaggtgttcaacctttattgttttatccaatatgaaacatataactgacacttgcata 44160704  T
Q  111 caa 113  Q
    |||    
T  44160705 caa 44160707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 3384322 - 3384387
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 71  Q
    |||||||||||||||| |||| | |||||||| |||||||| |||||||  |||| ||||| ||||    
T  3384322 cttacccaaaactttaaggcattaagtttatgggtcctcttccttataaagtgtttaacctatact 3384387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 11661602 - 11661557
Alignment:
Q  41 cctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||||||||||| |||| ||||| || |||||||||||    
T  11661602 cctcttacttataagatgtttaaccgttactattttatccgatgtg 11661557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 52635042 - 52634993
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataag 55  Q
    |||||||||||  ||| ||||||||||||||| ||||||||| |||||||    
T  52635042 cttacccaaaatcttaaggcaatgagtttatgggtcctcttatttataag 52634993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 22303715 - 22303759
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttactt 50  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||    
T  22303715 cttacccaaaaccttaaggcaatgggtttatgggtcctcttactt 22303759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 108
Target Start/End: Complemental strand, 37726572 - 37726504
Alignment:
Q  40 tcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgca 108  Q
    |||||||||||||||| | |||||| |||||| || ||||||||||||  |||||| || || ||||||    
T  37726572 tcctcttacttataaggtattcaacatttactattttatccgatgtgagacatataactcacacttgca 37726504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 6e-25; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 6 - 112
Target Start/End: Complemental strand, 34835311 - 34835205
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| || |||| ||||||   |||||| || ||||||    
T  34835311 cttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatcggatgtgggacatataactcaccctt 34835212  T
Q  106 gcacaca 112  Q
    | |||||    
T  34835211 gtacaca 34835205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 5420746 - 5420673
Alignment:
Q  13 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||| ||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5420746 aaaaccttaaggcaatgggtttatgagtcctcttacttataagatgttcaacctttactattctatccgatgtg 5420673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 113
Target Start/End: Complemental strand, 41972254 - 41972153
Alignment:
Q  12 caaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacac 111  Q
    |||||||||| ||||||| ||||||| ||||| | ||||||||| ||||||||||||||||||||||||||||||   |||||| || || |||||||||    
T  41972254 caaaactttatggcaatgggtttatgggtcctatcacttataaggtgttcaacctttacttttctatccgatgtgggacatataactcacacttgcacac 41972155  T
Q  112 aa 113  Q
    ||    
T  41972154 aa 41972153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 3669789 - 3669709
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| || |||| ||||||    
T  3669789 cttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactattttatctgatgtg 3669709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 45122113 - 45122221
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| |  |||||||||||| || |||||||||||||| ||||||||||||||| || ||||||||||||  |||||| || || |||    
T  45122113 cttacccaaaaccttaagaaaatgagtttatgggttctcttacttataaggtgttcaacctttactattttatccgatgtgagacatataactcacactt 45122212  T
Q  106 gcacacaat 114  Q
    |||||||||    
T  45122213 gcacacaat 45122221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 33113423 - 33113502
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    |||||||||||  ||| ||||||||||||||| |||||||||||||||||| |||||||||||||| || ||||||||||    
T  33113423 cttacccaaaatcttaaggcaatgagtttatgggtcctcttacttataagacgttcaacctttactattttatccgatgt 33113502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 34835577 - 34835512
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 71  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||| |||| ||||||||||    
T  34835577 cttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttaaacctttact 34835512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 34835843 - 34835778
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 71  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||| |||| ||||||||||    
T  34835843 cttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttaaacctttact 34835778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 147553 - 147473
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||||||| ||||||  ||||||| ||||||||| ||||||| ||||||||||||||| || |||||||||||    
T  147553 cttacccaaaactttaaggcaataggtttatgggtcctcttatttataaggtgttcaacctttactcttttatccgatgtg 147473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 45122724 - 45122648
Alignment:
Q  8 tacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatg 84  Q
    |||||||||| ||| | ||||||||||||| ||||||||||||||||| ||||||||||||||| || |||||||||    
T  45122724 tacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatg 45122648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 9609187 - 9609108
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    |||||| ||||| ||| ||| ||| ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||    
T  9609187 cttaccgaaaacattaaggcgatgggtttatgggtcatcttacttataagatgttcaacctttacttttctatctgatgt 9609108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 9608845 - 9608735
Alignment:
Q  8 tacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgc 107  Q
    |||||||||| ||| ||  ||| ||||||| ||| ||||||||||||| ||||||||||||||||||||||||||| ||   |||||| || || |||||    
T  9608845 tacccaaaaccttaaggtgatgggtttatgggtcatcttacttataaggtgttcaacctttacttttctatccgatatgggacatataactcacacttgc 9608746  T
Q  108 acacaatagaa 118  Q
    |||||| ||||    
T  9608745 acacaacagaa 9608735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 9483243 - 9483320
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgat 83  Q
    |||||||||||| ||| | ||||| ||||||| ||||||||||||||||| ||||||||||||||| || ||||||||    
T  9483243 cttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgat 9483320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 115
Target Start/End: Complemental strand, 40518684 - 40518575
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| | || || ||||||| ||||||||| ||||||| ||||||||||||||||||||||| ||||||   |||||| || || |||    
T  40518684 cttacccaaaaccttaagtcattgggtttatgggtcctcttatttataaggtgttcaacctttacttttctatctgatgtgggacatataactcacactt 40518585  T
Q  106 gcacacaata 115  Q
    | ||||||||    
T  40518584 gaacacaata 40518575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 70330 - 70410
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||| ||||| ||| |||| || ||||||| |||||||||||||||||||||||||| |||||| || |||||||||||    
T  70330 cttacctaaaaccttaaggcagtgggtttatgggtcctcttacttataagatgttcaacatttactcttttatccgatgtg 70410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 3038346 - 3038426
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||| ||||||| ||||| ||||||||||  ||||||||||||||| || |||||||||||    
T  3038346 cttacccaaaaccttaaggcaatgggtttatgggtccttttacttataaagtgttcaacctttactattttatccgatgtg 3038426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 25561876 - 25561952
Alignment:
Q  10 cccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||| ||| | ||||||||||||| ||||||||||||||||| |||||||| |||||| || |||||||||||    
T  25561876 cccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacgtttactcttttatccgatgtg 25561952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 34834978 - 34834898
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||||||||||| ||| ||||||||||||| |||| |||||||||| || ||||| |||||    
T  34834978 cttacccaaaaccttaaggcaatgagtttatgagtcatcttacttataaggtgtttaacctttactattttatccaatgtg 34834898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 1014301 - 1014380
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    |||||||||||||||| || || ||||||| | ||||||||||||||||| ||||||||||||||| || |||| |||||    
T  1014301 cttacccaaaactttaaggtaacgagtttacgggtcctcttacttataaggtgttcaacctttactattttatctgatgt 1014380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 4154722 - 4154829
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| || |||||||||||||||| ||||| | ||||||||  ||||||||||  ||||||||||| ||||||   |||||| || || |||    
T  4154722 cttacccaaaaccttggggcaatgagtttatgggtcctttcacttataaagtgttcaacctccacttttctatcagatgtgggacatataactcacactt 4154821  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  4154822 gcacacaa 4154829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 9309457 - 9309350
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    ||||||| | || ||| ||||||||||||| | ||||||||||||||||| |||||||| |||||| || |||||||||||   |||||| || || |||    
T  9309457 cttacccgacaccttaaggcaatgagtttaagggtcctcttacttataaggtgttcaacatttactcttttatccgatgtgggacatataactcacactt 9309358  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  9309357 gcacacaa 9309350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 30359373 - 30359266
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| ||| ||| ||||||| |||||||| |||||||| |||||||| |||||| || ||||||||||||  |||||| || || |||    
T  30359373 cttacccaaaaccttaaggctatgggtttatgggtcctcttgcttataaggtgttcaacatttactcttttatccgatgtgagacatataactcacactt 30359274  T
Q  106 gcacacaa 113  Q
    | ||||||    
T  30359273 gtacacaa 30359266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 45121967 - 45122046
Alignment:
Q  7 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||||||  ||| ||||||||||||||| ||||||||||||||||  ||||||||||||||| || ||| |||||||    
T  45121967 ttacccaaaatcttaaggcaatgagtttatgagtcctcttacttataaagtgttcaacctttactattttatgcgatgtg 45122046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 43398124 - 43398204
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctc---ttacttataagatgttcaacctttacttttctatccgat 83  Q
    |||| ||||||||||| |||||||| |||||| ||||||   ||| ||||||| |||||||||||||||||||||||||||    
T  43398124 cttatccaaaactttaaggcaatgaatttatgggtcctcctcttatttataaggtgttcaacctttacttttctatccgat 43398204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 18372050 - 18372115
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 71  Q
    |||||||||||| |||  ||||||||||||||  |||||||||||||||| |||||||||||||||    
T  18372050 cttacccaaaaccttaaagcaatgagtttatggatcctcttacttataaggtgttcaacctttact 18372115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 20870629 - 20870718
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatata 95  Q
    |||| ||||||  ||| |||| || ||||||| ||||||||||||||||||||||||||||||||| || |||| |||||| | ||||||    
T  20870629 cttatccaaaatcttaaggcagtgggtttatgggtcctcttacttataagatgttcaacctttactattttatctgatgtggaacatata 20870718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 40579562 - 40579651
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatata 95  Q
    |||||| ||||| |||  ||||| |||||||| ||||||||||||||||| ||||||||||||||| || ||||| || |||| ||||||    
T  40579562 cttacctaaaaccttaaagcaataagtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatatgaaacatata 40579651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 6876918 - 6876998
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||||||||  || | |||||||| |||| ||| ||||| ||||||| |||||||||||||||||| |||||||||||    
T  6876918 cttacccaaaaccctaagacaatgagtgtatgggtcatcttatttataaggtgttcaacctttacttttttatccgatgtg 6876998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 9482677 - 9482749
Alignment:
Q  23 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatata 95  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || ||||| ||||| | ||||||    
T  9482677 ggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatcccatgtggaacatata 9482749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 1513972 - 1514051
Alignment:
Q  7 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||||||| ||| ||  ||| ||||| | ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  1513972 ttacccaaaaccttaaggttatgggtttaagggtcctcttacttataaggtgttcaacctttactcttttatccgatgtg 1514051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 18373004 - 18373063
Alignment:
Q  23 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccga 82  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||||||||| || |||||||    
T  18373004 ggcaatgagtttatgagtcctcttatttataaggtgttcaacctttactattttatccga 18373063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 108
Target Start/End: Original strand, 1013927 - 1014029
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    ||||| ||||||| || ||||||| ||||||  ||||||||||||||| | |||||||| |||||| || ||||||||||| | |||||| || || |||    
T  1013927 cttactcaaaactctaaggcaatgggtttattggtcctcttacttatagggtgttcaacttttactattttatccgatgtggaacatataactcacactt 1014026  T
Q  106 gca 108  Q
    |||    
T  1014027 gca 1014029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 8794188 - 8794106
Alignment:
Q  31 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    ||||||| |||||||||||||||||||||||||| |||| | || ||||||||||||  |||||| || || |||| ||||||    
T  8794188 gtttatgagtcctcttacttataagatgttcaacatttattcttttatccgatgtgagacatataactcacacttgtacacaa 8794106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 10 - 113
Target Start/End: Complemental strand, 9309077 - 9308972
Alignment:
Q  10 cccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaag--catatagcttacccttgc 107  Q
    |||||||| ||  ||||||| ||||||| |||||||||||||||| ||||||||| |||||| || |||| |||||| ||  |||||| || || |||||    
T  9309077 cccaaaacctttaggcaatgggtttatgggtcctcttacttataacatgttcaacttttactcttttatctgatgtgtaggacatataactcacacttgc 9308978  T
Q  108 acacaa 113  Q
    ||||||    
T  9308977 acacaa 9308972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 9507884 - 9507819
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 71  Q
    |||||||||||| ||| || |||| ||||||| ||||||||||||||||| | |||||||||||||    
T  9507884 cttacccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtattcaacctttact 9507819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 43274835 - 43274924
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatata 95  Q
    ||||| |||||| ||| | ||||  ||||||| |||||||||||||||| || ||||||||||||| || |||| |||||||| ||||||    
T  43274835 cttactcaaaaccttaagacaataggtttatgggtcctcttacttataatatattcaacctttactcttttatctgatgtgaaacatata 43274924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 3670162 - 3670082
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| || |||  ||||||| |||||| |||||||||| |||| |||||||||| || |||||||||||    
T  3670162 cttacccaaaaccttaaggaaataggtttatgggtcctcatacttataaggtgttaaacctttactattttatccgatgtg 3670082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 8918820 - 8918900
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| | ||||  ||||||| ||||||||||||||||  ||||||||||||||| | ||||| ||||||    
T  8918820 cttacccaaaaccttaagtcaataggtttatgggtcctcttacttataaagtgttcaacctttactctgctatctgatgtg 8918900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 74
Target Start/End: Complemental strand, 40518173 - 40518105
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttactttt 74  Q
    |||||||||||| ||| |||| || ||||||| ||||  ||||||||||| ||||||||||||||||||    
T  40518173 cttacccaaaaccttaaggcattgggtttatgggtccatttacttataaggtgttcaacctttactttt 40518105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 4154333 - 4154415
Alignment:
Q  2 cacacttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    |||||||||||||||  ||| ||||||||||||||| || |||| ||||||||  ||||||||||  ||||||||||| |||||    
T  4154333 cacacttacccaaaatattaaggcaatgagtttatgggt-ctctcacttataaagtgttcaacctccacttttctatctgatgt 4154415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 82
Target Start/End: Original strand, 18372676 - 18372734
Alignment:
Q  23 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccga 82  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||    
T  18372676 ggcaatgggtttatgagtcctcttacttataag-tgttcaacctttactattttatccga 18372734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 18372788 - 18372835
Alignment:
Q  39 gtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  18372788 gtcctcttacttataaggtgttcaacctttactattttatccgatgtg 18372835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 30359711 - 30359604
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||  ||| ||  ||| ||||||| ||||||||||||||||| |||||||| |||||| || |||| |||||||  |||||| || || |||    
T  30359711 cttacccaaaatcttaaggttatgggtttatgagtcctcttacttataaggtgttcaacttttactcttttatctgatgtgagacatataactcacactt 30359612  T
Q  106 gcacacaa 113  Q
    | ||||||    
T  30359611 gtacacaa 30359604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 41416252 - 41416307
Alignment:
Q  31 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||  |||||||||||||||| ||||||||||||||| || |||||||||||    
T  41416252 gtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtg 41416307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 3037783 - 3037853
Alignment:
Q  25 caatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatata 95  Q
    ||||| ||||||| ||||||||||||||||| |||||||| |||||| ||  |||||||||| | ||||||    
T  3037783 caatgggtttatgagtcctcttacttataaggtgttcaacatttactatttcatccgatgtggaacatata 3037853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 9620749 - 9620839
Alignment:
Q  23 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    ||||||||||||||| ||||||| ||||||||  || ||||| | |||||||||||| | |||||  |||||| || || |||||||||||    
T  9620749 ggcaatgagtttatgggtcctctcacttataaagtgatcaacttctacttttctatctgttgtgagacatataactcacacttgcacacaa 9620839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 113
Target Start/End: Complemental strand, 12283953 - 12283868
Alignment:
Q  28 tgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    |||||||||||||| | |||||| |||||| |||||| ||||||||| |||| || |||   |||||| ||||| |||||||||||    
T  12283953 tgagtttatgtgtcattttacttttaagatattcaacatttacttttttatctgacgtgggacatataacttacacttgcacacaa 12283868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 18372349 - 18372393
Alignment:
Q  43 tcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    ||||||||||||| ||||||||||||||| || ||||||||||||    
T  18372349 tcttacttataaggtgttcaacctttactattttatccgatgtga 18372393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 25561736 - 25561780
Alignment:
Q  42 ctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||||| ||||||||||||||| || |||||||||||    
T  25561736 ctcttacttataaggtgttcaacctttactcttttatccgatgtg 25561780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 37544546 - 37544626
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| |||  | ||||  |||||| |||||||| |||||||  ||||||||||||||| || |||||||||||    
T  37544546 cttacccaaaaccttaaagtaatggatttatgggtcctctttcttataatgtgttcaacctttactattttatccgatgtg 37544626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 30441187 - 30441103
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttactta----taagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||| ||||||| | |||||||||||    |||| ||||||||||||||| || || ||||||||    
T  30441187 cttacccaaaaccttaaggcaatgggtttatgggccctcttacttataattaaggtgttcaacctttactattttagccgatgtg 30441103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 45121737 - 45121792
Alignment:
Q  31 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||  |||||||||||||||| || |||||||||||| || |||||||||||    
T  45121737 gtttatggatcctcttacttataaggtgatcaacctttactcttttatccgatgtg 45121792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 5915969 - 5915928
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctctta 47  Q
    |||||||||||| ||| ||||||||||||||| |||||||||    
T  5915969 cttacccaaaaccttaaggcaatgagtttatgggtcctctta 5915928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 32640588 - 32640664
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    |||||||||||| ||| ||||||| ||||||  |||||||||| |     |||||||||||||||| || ||||||||||||    
T  32640588 cttacccaaaaccttaaggcaatgggtttatcggtcctcttacct-----atgttcaacctttactcttttatccgatgtga 32640664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 32305559 - 32305503
Alignment:
Q  26 aatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccga 82  Q
    |||| ||||||  ||| ||||||||||||| ||||||||||||||| || |||||||    
T  32305559 aatgggtttataggtcttcttacttataaggtgttcaacctttactattttatccga 32305503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 5459 - 5352
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||| ||||||  ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||| | |||||| || || |||    
T  5459 cttatccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactgttctatccgatgtggaacatataactcacactt 5360  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  5359 gcacacaa 5352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 5084 - 4977
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    ||||||||||||  || ||||||||||||||| ||| | ||||||||||||| || |||||||||| |||| ||||||||||  ||||||  | || |||    
T  5084 cttacccaaaaccataaggcaatgagtttatgggtctttttacttataagatattaaacctttactgttctctccgatgtgagacatataattcacactt 4985  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  4984 gcacacaa 4977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 7517682 - 7517575
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||| || || |||    
T  7517682 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatataactcacactt 7517583  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  7517582 gcacacaa 7517575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 30245179 - 30245072
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| ||||||||||||||| ||| ||||||||||||| ||||||||||||||| || ||||||||||| | |||||| || || |||    
T  30245179 cttacccaaaaccttaaggcaatgagtttatgggtcgtcttacttataaggtgttcaacctttactcttttatccgatgtggaacatataactcacactt 30245080  T
Q  106 gcacacaa 113  Q
    | ||||||    
T  30245079 gtacacaa 30245072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 45434738 - 45434631
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| |||| | |||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||   |||||| ||||| |||    
T  45434738 cttacccaaaaccttaaggcagtaagtttatgggtcctcttacttataaggtgttcaacctttacttttttatccgatgtgggacatataacttacactt 45434639  T
Q  106 gcacacaa 113  Q
    | ||||||    
T  45434638 gtacacaa 45434631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 22566718 - 22566798
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  22566718 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtg 22566798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 22567095 - 22567175
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||| ||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  22567095 cttaccaaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtg 22567175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 115
Target Start/End: Original strand, 40230348 - 40230456
Alignment:
Q  7 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttg 106  Q
    ||||||||||| ||| | | ||| ||||||| |||||||||||||||||||||||||| ||||||||| ||| |||||||   |||||| ||||| ||||    
T  40230348 ttacccaaaaccttaagactatgggtttatgggtcctcttacttataagatgttcaacttttacttttttattcgatgtgggacatataacttacacttg 40230447  T
Q  107 cacacaata 115  Q
    |||||||||    
T  40230448 cacacaata 40230456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 23433 - 23540
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| ||||||  ||||||| ||||||||||||||||| ||||||||||||||| || ||||||||||| | |||||| || ||  ||    
T  23433 cttacccaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttactattgtatccgatgtggaacatataactcacaatt 23532  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  23533 gcacacaa 23540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 118357 - 118464
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| || |||| |||||||  ||||||||||||| || ||||||||||||||||||||||| ||||||   |||||| ||||| |||    
T  118357 cttacccaaaaccttacggtaatgggtttatggatcctcttacttattaggtgttcaacctttacttttctatctgatgtgggacatataacttacactt 118456  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  118457 gcacacaa 118464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 1085672 - 1085779
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||  ||||||||||||||| || |||||||||||   |||||| || || |||    
T  1085672 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgggacatataactcacactt 1085771  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  1085772 gcacacaa 1085779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 16569298 - 16569191
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||| ||||| ||| ||||||| ||||||| ||||||||||||||||| | ||||||||||||| |||||||||||||||  |||||| || || |||    
T  16569298 cttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactcacactt 16569199  T
Q  106 gcacacaa 113  Q
    ||| ||||    
T  16569198 gcatacaa 16569191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 16596364 - 16596471
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||| ||||| ||| ||||||| ||||||| ||||||||||||||||| | ||||||||||||| |||||||||||||||  |||||| || || |||    
T  16596364 cttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatataactcacactt 16596463  T
Q  106 gcacacaa 113  Q
    ||| ||||    
T  16596464 gcatacaa 16596471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 7 - 86
Target Start/End: Original strand, 37533067 - 37533146
Alignment:
Q  7 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||||||| || ||||| |||||    
T  37533067 ttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatgtg 37533146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 28301616 - 28301706
Alignment:
Q  23 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    ||||||| ||||||| ||||||||||||||||| |||||| | ||||||||||||||||||||||  |||||| || || |||||||||||    
T  28301616 ggcaatgggtttatgggtcctcttacttataaggtgttcagcttttacttttctatccgatgtgagacatataactcacacttgcacacaa 28301706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 6054662 - 6054581
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| |||||||| |||||| || ||||||||||||    
T  6054662 cttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtga 6054581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 19122833 - 19122753
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| |||||||  |||||| ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  19122833 cttacccaaaaccttaaggcaatggatttatgagtcctcttacttataaggtgttcaacctttactattttatccgatgtg 19122753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 30244372 - 30244292
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| | ||||||||||||| || |||||||||||    
T  30244372 cttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtcttcaacctttactcttttatccgatgtg 30244292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 7554127 - 7554020
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| ||| ||| |||||||  |||||||||||||||| ||||||||||||||| || |||||||||||   |||||| || || |||    
T  7554127 cttacccaaaaccttaaggctatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatataactcacactt 7554028  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  7554027 gcacacaa 7554020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 43241596 - 43241490
Alignment:
Q  7 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttg 106  Q
    ||||| ||||| ||| | |||| |||||||| ||||| ||||||||||| ||||||||||||| |||| ||||||||||| | |||||| || || ||||    
T  43241596 ttacctaaaaccttaagtcaataagtttatgagtccttttacttataaggtgttcaacctttatttttttatccgatgtggaacatataactcacacttg 43241497  T
Q  107 cacacaa 113  Q
    |||||||    
T  43241496 cacacaa 43241490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 11845293 - 11845204
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatata 95  Q
    |||| ||||||| ||| |||||||  |||||| ||||||||||||||||| ||||||||||||||| || ||||||||||| | ||||||    
T  11845293 cttatccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatata 11845204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 34218090 - 34218171
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    |||||||||||| ||| | ||||| ||||||| ||||||| ||||||||| |||||||| ||||||||| ||||||||||||    
T  34218090 cttacccaaaaccttaagacaatgggtttatgagtcctctcacttataaggtgttcaacatttacttttttatccgatgtga 34218171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 24177537 - 24177457
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||| ||||||||| ||||||| ||||||| |||| |||||||||||| |||||| |||||||| || |||||||||||    
T  24177537 cttaccaaaaactttaaggcaatgggtttatgggtccgcttacttataaggtgttcagcctttactcttttatccgatgtg 24177457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 40094830 - 40094937
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| | | ||| ||||||| ||||||||||||||||| |||| |||||||||| || ||| ||||||||  |||||| || || |||    
T  40094830 cttacccaaaaccttaagacgatgggtttatgggtcctcttacttataaggtgttgaacctttactcttttattcgatgtgagacatataactcacactt 40094929  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  40094930 gcacacaa 40094937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 45433343 - 45433236
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||  ||| ||||||  ||||||| || |||||||||||||| ||||||||||||||| || ||||||||||| | |||||| || || |||    
T  45433343 cttacccaaaatcttaaggcaataggtttatgagttctcttacttataaggtgttcaacctttactcttttatccgatgtggatcatataactcacactt 45433244  T
Q  106 gcacacaa 113  Q
    | ||||||    
T  45433243 gtacacaa 45433236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 47129195 - 47129116
Alignment:
Q  8 tacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    |||||||||| |||  || ||| ||||||| |||||||||||||||||| |||||||||||||| || ||||||||||||    
T  47129195 tacccaaaaccttaaagcgatgggtttatgggtcctcttacttataagaggttcaacctttactattttatccgatgtga 47129116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 1085304 - 1085381
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgat 83  Q
    |||||||||||| ||| ||||||||||||||| || ||||||||||| || |||||||| |||||| || ||||||||    
T  1085304 cttacccaaaaccttaaggcaatgagtttatgggttctcttacttatgagttgttcaacttttactattttatccgat 1085381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 20599416 - 20599339
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgat 83  Q
    |||||||||||| ||| |||||||||||||| |||||||||| ||||||  |||| | ||||||||||| ||||||||    
T  20599416 cttacccaaaacgttaaggcaatgagtttatatgtcctcttatttataaagtgtttatcctttacttttttatccgat 20599339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 37533420 - 37533485
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 71  Q
    |||||||||||| ||| |||||||  |||||| ||||||||||||||||| |||||||||||||||    
T  37533420 cttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacctttact 37533485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 9901745 - 9901666
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| | |||||||||||||  |||||| || |||||||||||||||||||||| || |||||||||||    
T  9901745 cttacccaaaaccttaagacaatgagtttatggatcctct-acgtataagatgttcaacctttactgttttatccgatgtg 9901666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 29157667 - 29157587
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| |||||||  |||||| ||| ||||||||||||| ||||||||||||||| || |||||| ||||    
T  29157667 cttacccaaaaccttaaggcaatggatttatgggtcgtcttacttataaggtgttcaacctttactattttatccggtgtg 29157587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 45754817 - 45754737
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||| ||| ||||||| ||| ||||||||||||| |||||||| |||||| || |||||||||||    
T  45754817 cttacccaaaaccttaaggctatgggtttatgagtcatcttacttataaggtgttcaacatttactattttatccgatgtg 45754737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 8128497 - 8128604
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||| ||||||| ||| ||  ||| ||||||| |||||||||| |||||| ||||||||||||| ||||||||||||| ||   |||||| || || |||    
T  8128497 cttaaccaaaaccttaaggttatgggtttatgggtcctcttacatataaggtgttcaacctttatttttctatccgatatgggacatataactcacactt 8128596  T
Q  106 gcacacaa 113  Q
    ||||||||    
T  8128597 gcacacaa 8128604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 36623060 - 36622953
Alignment:
Q  8 tacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgc 107  Q
    |||||||||| ||| |||||||  ||||||  ||||| ||||||||| ||||| |||||||||| || |||||||||||   |||||| || || |||||    
T  36623060 tacccaaaaccttaaggcaatggatttatggatcctcctacttataaaatgtttaacctttactattttatccgatgtgggacatataactcacacttgc 36622961  T
Q  108 acacaata 115  Q
    ||||||||    
T  36622960 acacaata 36622953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 14681612 - 14681510
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttaccctt 105  Q
    |||||||||||| ||| | ||||| ||||||| | ||||||||||| ||| ||||||||||||||| || |||| ||||||   |||||| ||||| |||    
T  14681612 cttacccaaaaccttaagacaatgggtttatgggccctcttacttacaaggtgttcaacctttactattttatctgatgtgggacatataacttacactt 14681513  T
Q  106 gca 108  Q
    |||    
T  14681512 gca 14681510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 36109007 - 36109080
Alignment:
Q  40 tcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||||   ||||| || || |||||||||||    
T  36109007 tcctcttacttataaggtgttcaacctttactcttttatccgatgtgagaaatataactcacacttgcacacaa 36109080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 30253594 - 30253534
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacct 66  Q
    |||||||||||| ||| ||||||||||||||| || |||||||||||||| | ||||||||    
T  30253594 cttacccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtcttcaacct 30253534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 36939790 - 36939854
Alignment:
Q  7 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttact 71  Q
    ||||||||||| ||| |||||||  |||||| ||||||||||||||||| |||||||| ||||||    
T  36939790 ttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacttttact 36939854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 36534865 - 36534947
Alignment:
Q  31 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    ||||||| ||||||||||||||||| |||||||||| |||| || ||||||| |||   ||||||  |||| |||||||||||    
T  36534865 gtttatgggtcctcttacttataaggtgttcaacctctactgttttatccgaggtgggacatataagttacacttgcacacaa 36534947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 30255406 - 30255361
Alignment:
Q  41 cctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||    
T  30255406 cctcttacttataaggtgttcaacctttactcttttatccgatgtg 30255361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 101
Target Start/End: Original strand, 24838757 - 24838853
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcct-cttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttac 101  Q
    |||||||||||| ||| | ||| | |||||||  |||| |||||||||||| ||||||||||||||| || ||| ||||||||  |||||| |||||    
T  24838757 cttacccaaaaccttaagacaacgggtttatggatccttcttacttataaggtgttcaacctttactcttttattcgatgtgagacatataacttac 24838853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 30245561 - 30245489
Alignment:
Q  41 cctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    ||||||||||||||| ||||||||||||||| || |||| ||||||   |||||| || || |||||||||||    
T  30245561 cctcttacttataaggtgttcaacctttactcttttatctgatgtgggacatataactcacacttgcacacaa 30245489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 30244770 - 30244696
Alignment:
Q  39 gtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    ||||||||| ||||||| ||||||||||||||| || ||||| |||||   |||||| || || |||||||||||    
T  30244770 gtcctcttatttataaggtgttcaacctttactcttttatccaatgtgggacatataactcacacttgcacacaa 30244696  T

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Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 37346020 - 37345947
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatc 79  Q
    ||||| |||||||||| ||||||  ||||||| ||| ||| |||||||| ||||| |||||  |||||||||||    
T  37346020 cttactcaaaactttaaggcaatatgtttatgggtcttctcacttataaaatgtttaacctccacttttctatc 37345947  T

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Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 41910669 - 41910730
Alignment:
Q  25 caatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||| ||||||| ||||||| | ||||||| | ||||||||||||| || |||||||||||    
T  41910669 caatgggtttatgggtcctctcagttataaggtattcaacctttactcttttatccgatgtg 41910730  T

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Target: scaffold0702 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 570 - 650
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || || ||||||||    
T  570 cttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgatgtg 650  T

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Target: scaffold0702; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 231 - 278
Alignment:
Q  39 gtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    ||||||||||||||||| ||||||||||||||| || |||||||||||    
T  231 gtcctcttacttataaggtgttcaacctttactattttatccgatgtg 278  T

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Target: scaffold0734 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 113
Target Start/End: Complemental strand, 5862 - 5772
Alignment:
Q  23 ggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacacaa 113  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||   |||||| || || |||||||||||    
T  5862 ggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgcgacatataactcacacttgcacacaa 5772  T

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Target: scaffold0734; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 5491 - 5419
Alignment:
Q  13 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgt 85  Q
    ||||||||| | ||||  ||||||| | ||||||||||||||| ||||||||||||||| || ||||||||||    
T  5491 aaaactttaagacaatatgtttatgggccctcttacttataaggtgttcaacctttactattttatccgatgt 5419  T

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Target: scaffold0391 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 1162 - 1242
Alignment:
Q  6 cttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtg 86  Q
    |||||||||||| ||| ||||||| ||||||| ||||| || |||||||| ||||||||||||||| || ||||| |||||    
T  1162 cttacccaaaaccttaaggcaatgggtttatgagtcctttttcttataaggtgttcaacctttactcttttatccaatgtg 1242  T

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Target: scaffold0027 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 47461 - 47381
Alignment:
Q  7 ttacccaaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    ||||||||||||||| ||||||| |||||||  | |||||||||||||| ||||||| ||||||| || |||| |||||||    
T  47461 ttacccaaaactttaaggcaatgggtttatggattctcttacttataaggtgttcaaactttactattttatcggatgtga 47381  T

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Target: scaffold0171 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 17519 - 17619
Alignment:
Q  13 aaaactttagggcaatgagtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtgaagcatatagcttacccttgcacaca 112  Q
    ||||| ||| ||| ||| ||||||| ||||||||||||| ||| ||||||||||||||| || |||| ||||||   |||||| || || ||||||||||    
T  17519 aaaaccttaaggctatgggtttatgggtcctcttacttacaaggtgttcaacctttactattttatctgatgtgtgacatataactcacacttgcacaca 17618  T
Q  113 a 113  Q
    |    
T  17619 a 17619  T

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Target: scaffold0504 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 10192 - 10248
Alignment:
Q  31 gtttatgtgtcctcttacttataagatgttcaacctttacttttctatccgatgtga 87  Q
    ||||||| ||||||||||||||||| |||||||| |||||  || ||||||||||||    
T  10192 gtttatgggtcctcttacttataaggtgttcaacttttaccattttatccgatgtga 10248  T

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