View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8810_high_3 (Length: 351)
Name: NF8810_high_3
Description: NF8810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8810_high_3 |
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Alignment Details
Target: chr3 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 1109022 - 1109169
Alignment:
| Q |
1 |
aacgatggttcagacatatgaatgtgatctttgcagttcacaatgtgtctgaacagattgagatcaataatggcatggaaccccttcctgcagatgctac |
100 |
Q |
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| T |
1109022 |
aacgatggttcagacatatgaatgtgatctttgcagttcacaatgtgtctgaacagattgagatcaataatggcatggaaccccttcctgcagatgctac |
1109121 |
T |
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| Q |
101 |
agatcatgtgcagagaaatacgtataaggatgtgaagaagaaagcatatatt |
152 |
Q |
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|||| || |||||||||| |||||| |||||||||||||||||||||||| |
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| T |
1109122 |
agat---gt-cagagaaatatgtataacgatgtgaagaagaaagcatatatt |
1109169 |
T |
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