View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8810_high_4 (Length: 275)
Name: NF8810_high_4
Description: NF8810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8810_high_4 |
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Alignment Details
Target: chr6 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 783301 - 783059
Alignment:
| Q |
1 |
tttggaagaagataacagaagagacgatgacaacgacacgcttaacacaatttccgactgagtgtgtcacaggtgacactttctctaatatcccatatga |
100 |
Q |
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| T |
783301 |
tttggaagaagataacagaagagacgatgacaacgacacgcttaacgcaatttccgactgagtgtgtcacaggtgacactttctctaatatcccatatga |
783202 |
T |
|
| Q |
101 |
aacctgccaccaaatgaattaagctccaacatcgatatgcaacaatgctcaataagtaagttactattactacgggaaatgttctaacattagcaactaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
783201 |
aacctgccaccaaatgaattaagctccaacatcgatatgcaacaatgctcaataagtaagttactattactacgggaaatgttctaacattagcaactaa |
783102 |
T |
|
| Q |
201 |
atatggtagtctgtacgtgtaaagaagaacgcgagagtataat |
243 |
Q |
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|||||||| ||||||||||||||||||||| ||||| |||||| |
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| T |
783101 |
atatggtaatctgtacgtgtaaagaagaacacgagaatataat |
783059 |
T |
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