View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8810_low_14 (Length: 215)

Name: NF8810_low_14
Description: NF8810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8810_low_14
NF8810_low_14
[»] chr2 (94 HSPs)
chr2 (1-207)||(27476280-27476489)
chr2 (1-110)||(39454462-39454573)
chr2 (5-119)||(27132513-27132629)
chr2 (12-118)||(37744452-37744560)
chr2 (1-118)||(41377358-41377476)
chr2 (10-110)||(16736112-16736214)
chr2 (1-119)||(34820543-34820663)
chr2 (1-110)||(4104170-4104281)
chr2 (1-118)||(4104423-4104542)
chr2 (1-110)||(12303796-12303907)
chr2 (1-118)||(13354441-13354560)
chr2 (12-117)||(28631278-28631385)
chr2 (1-110)||(31450677-31450788)
chr2 (1-118)||(34127829-34127947)
chr2 (1-117)||(16655610-16655728)
chr2 (2-110)||(28203125-28203235)
chr2 (1-119)||(28631538-28631658)
chr2 (1-119)||(43183847-43183967)
chr2 (1-110)||(13354188-13354299)
chr2 (1-110)||(21470306-21470417)
chr2 (1-110)||(21470559-21470669)
chr2 (1-118)||(25642532-25642651)
chr2 (1-110)||(27476631-27476742)
chr2 (1-110)||(32933855-32933966)
chr2 (1-118)||(41659748-41659867)
chr2 (1-118)||(43183586-43183705)
chr2 (12-118)||(39912630-39912739)
chr2 (12-118)||(20908786-20908894)
chr2 (12-110)||(34820290-34820390)
chr2 (1-119)||(37744652-37744772)
chr2 (1-119)||(38275479-38275599)
chr2 (12-110)||(41377629-41377729)
chr2 (1-110)||(5961680-5961791)
chr2 (10-119)||(16655879-16655990)
chr2 (1-110)||(17856210-17856321)
chr2 (1-110)||(18565077-18565188)
chr2 (1-110)||(27883479-27883590)
chr2 (1-110)||(31450930-31451041)
chr2 (1-118)||(35408785-35408904)
chr2 (1-110)||(37412842-37412953)
chr2 (15-119)||(4121041-4121147)
chr2 (1-110)||(38275719-38275832)
chr2 (1-108)||(16736362-16736471)
chr2 (1-119)||(32933593-32933713)
chr2 (16-118)||(36442413-36442517)
chr2 (1-110)||(12304049-12304160)
chr2 (1-118)||(20908514-20908633)
chr2 (36-118)||(36211699-36211782)
chr2 (28-118)||(40694198-40694289)
chr2 (1-119)||(44915742-44915861)
chr2 (13-110)||(14877494-14877591)
chr2 (10-110)||(18565276-18565378)
chr2 (1-110)||(39912890-39913003)
chr2 (1-86)||(44612747-44612833)
chr2 (1-116)||(25642273-25642390)
chr2 (38-110)||(37412604-37412677)
chr2 (12-110)||(4120775-4120875)
chr2 (12-110)||(10833310-10833410)
chr2 (12-118)||(16261145-16261253)
chr2 (1-107)||(34484310-34484418)
chr2 (16-110)||(39454712-39454808)
chr2 (1-110)||(12304418-12304529)
chr2 (36-110)||(20297421-20297496)
chr2 (13-110)||(28202871-28202970)
chr2 (10-110)||(16260882-16260983)
chr2 (10-110)||(27246256-27246358)
chr2 (2-110)||(45389142-45389252)
chr2 (1-108)||(15829733-15829842)
chr2 (27-110)||(17856480-17856564)
chr2 (45-119)||(1580150-1580225)
chr2 (1-118)||(5921650-5921769)
chr2 (1-118)||(15137068-15137187)
chr2 (1-110)||(34127577-34127688)
chr2 (1-87)||(40694439-40694526)
chr2 (2-118)||(27914158-27914276)
chr2 (10-110)||(39150098-39150200)
chr2 (1-77)||(36211605-36211682)
chr2 (31-110)||(27132805-27132885)
chr2 (1-111)||(39149854-39149966)
chr2 (1-87)||(27883721-27883808)
chr2 (15-124)||(32503543-32503654)
chr2 (1-103)||(32503801-32503905)
chr2 (52-119)||(34484237-34484305)
chr2 (13-102)||(11943764-11943855)
chr2 (1-118)||(36442136-36442255)
chr2 (36-118)||(38073781-38073864)
chr2 (33-118)||(23992203-23992289)
chr2 (12-119)||(16350079-16350188)
chr2 (12-119)||(27913896-27914005)
chr2 (12-110)||(36211361-36211461)
chr2 (13-119)||(41660012-41660120)
chr2 (57-119)||(44610864-44610926)
chr2 (1-77)||(44916003-44916080)
chr2 (10-65)||(44612548-44612604)
[»] chr1 (111 HSPs)
chr1 (1-119)||(29256834-29256954)
chr1 (1-110)||(18793702-18793813)
chr1 (1-118)||(22584616-22584735)
chr1 (1-110)||(23281274-23281385)
chr1 (1-110)||(34279505-34279616)
chr1 (12-110)||(9881563-9881662)
chr1 (1-110)||(10654293-10654404)
chr1 (1-118)||(24590489-24590608)
chr1 (12-119)||(4045101-4045210)
chr1 (11-118)||(50921365-50921474)
chr1 (1-128)||(51692135-51692263)
chr1 (12-118)||(52412873-52412981)
chr1 (1-110)||(10923627-10923738)
chr1 (1-110)||(22584362-22584473)
chr1 (1-110)||(25088027-25088138)
chr1 (1-110)||(34028985-34029096)
chr1 (1-110)||(50574781-50574892)
chr1 (1-110)||(51691885-51691996)
chr1 (1-110)||(52412609-52412720)
chr1 (2-110)||(14776000-14776110)
chr1 (1-110)||(32564214-32564324)
chr1 (15-119)||(50118349-50118455)
chr1 (12-118)||(10923365-10923473)
chr1 (1-119)||(37199185-37199305)
chr1 (1-119)||(42607524-42607644)
chr1 (12-110)||(45305685-45305784)
chr1 (1-110)||(1831675-1831786)
chr1 (1-110)||(5463382-5463493)
chr1 (1-110)||(34028732-34028843)
chr1 (12-117)||(36657776-36657883)
chr1 (10-118)||(6181889-6181999)
chr1 (12-119)||(49291258-49291367)
chr1 (1-108)||(50574527-50574636)
chr1 (1-123)||(11787738-11787862)
chr1 (12-110)||(16267726-16267826)
chr1 (16-110)||(50921071-50921167)
chr1 (1-110)||(28970430-28970541)
chr1 (1-110)||(33753236-33753347)
chr1 (10-110)||(21035996-21036098)
chr1 (13-97)||(32517629-32517715)
chr1 (2-110)||(32563970-32564080)
chr1 (15-119)||(44222194-44222300)
chr1 (31-119)||(9119294-9119383)
chr1 (27-119)||(30611222-30611315)
chr1 (1-108)||(33753480-33753589)
chr1 (17-119)||(19885984-19886088)
chr1 (1-119)||(25088280-25088399)
chr1 (13-119)||(30293289-30293396)
chr1 (1-110)||(4550864-4550975)
chr1 (36-118)||(5117996-5118079)
chr1 (13-110)||(16267966-16268064)
chr1 (1-110)||(19986386-19986497)
chr1 (13-110)||(36077282-36077381)
chr1 (2-119)||(36884724-36884843)
chr1 (1-118)||(37198935-37199054)
chr1 (1-118)||(46738988-46739106)
chr1 (1-110)||(51810148-51810259)
chr1 (10-111)||(51810411-51810514)
chr1 (3-102)||(21385202-21385303)
chr1 (30-110)||(35986243-35986324)
chr1 (1-119)||(6181618-6181738)
chr1 (1-119)||(30293015-30293135)
chr1 (1-110)||(10654041-10654151)
chr1 (1-118)||(13944775-13944894)
chr1 (1-110)||(14118541-14118652)
chr1 (1-118)||(14775748-14775867)
chr1 (31-110)||(18793986-18794068)
chr1 (1-118)||(27209172-27209291)
chr1 (36-110)||(28112732-28112807)
chr1 (1-98)||(46949779-46949878)
chr1 (12-119)||(13944513-13944622)
chr1 (36-124)||(19886214-19886303)
chr1 (1-77)||(28112795-28112872)
chr1 (1-119)||(32517777-32517895)
chr1 (12-119)||(34621910-34622019)
chr1 (1-107)||(4045363-4045471)
chr1 (28-123)||(11394952-11395048)
chr1 (1-107)||(24655600-24655708)
chr1 (12-110)||(30792451-30792551)
chr1 (1-110)||(40703129-40703240)
chr1 (1-118)||(42607766-42607885)
chr1 (12-77)||(5118096-5118162)
chr1 (45-110)||(24590237-24590303)
chr1 (10-110)||(24655859-24655961)
chr1 (15-110)||(11788018-11788115)
chr1 (1-77)||(11797220-11797297)
chr1 (12-72)||(13831297-13831358)
chr1 (46-118)||(30611531-30611604)
chr1 (31-110)||(34279251-34279331)
chr1 (27-110)||(36657511-36657595)
chr1 (36-110)||(11797157-11797232)
chr1 (1-110)||(29257087-29257198)
chr1 (1-98)||(49291016-49291115)
chr1 (46-119)||(1831974-1832048)
chr1 (4-108)||(5463130-5463236)
chr1 (1-85)||(46950000-46950085)
chr1 (41-108)||(11394705-11394773)
chr1 (2-110)||(31125947-31126050)
chr1 (1-119)||(40533927-40534047)
chr1 (1-98)||(21384960-21385058)
chr1 (1-62)||(9119556-9119618)
chr1 (2-110)||(27209414-27209524)
chr1 (47-116)||(40534236-40534306)
chr1 (36-77)||(5118067-5118108)
chr1 (45-109)||(20260440-20260505)
chr1 (13-118)||(3569379-3569487)
chr1 (1-77)||(19886151-19886226)
chr1 (2-69)||(36884969-36885037)
chr1 (36-110)||(45305420-45305495)
chr1 (45-110)||(19269371-19269437)
chr1 (12-110)||(20260654-20260754)
[»] chr8 (76 HSPs)
chr8 (10-118)||(1826064-1826174)
chr8 (10-118)||(1860509-1860619)
chr8 (1-118)||(31230877-31230996)
chr8 (1-110)||(23244779-23244890)
chr8 (1-110)||(31230624-31230735)
chr8 (12-119)||(758346-758455)
chr8 (1-128)||(37393470-37393599)
chr8 (12-110)||(14920686-14920786)
chr8 (12-110)||(37393752-37393852)
chr8 (1-119)||(39912183-39912303)
chr8 (1-110)||(11198469-11198580)
chr8 (1-110)||(24456916-24457027)
chr8 (13-118)||(29027244-29027351)
chr8 (1-110)||(39240041-39240152)
chr8 (1-110)||(40040173-40040284)
chr8 (1-118)||(3869213-3869332)
chr8 (1-110)||(18018050-18018161)
chr8 (1-110)||(35224031-35224142)
chr8 (10-97)||(7041653-7041742)
chr8 (1-107)||(18017804-18017912)
chr8 (12-110)||(30872794-30872894)
chr8 (1-110)||(119128-119238)
chr8 (1-118)||(21515464-21515583)
chr8 (1-126)||(26736120-26736247)
chr8 (1-109)||(40094487-40094597)
chr8 (1-108)||(18622011-18622120)
chr8 (3-110)||(35223785-35223894)
chr8 (12-119)||(6843497-6843608)
chr8 (1-110)||(5417077-5417188)
chr8 (1-110)||(18914515-18914626)
chr8 (1-118)||(30568540-30568659)
chr8 (1-110)||(30650201-30650312)
chr8 (45-110)||(24456745-24456811)
chr8 (10-118)||(21512416-21512525)
chr8 (2-109)||(40032693-40032802)
chr8 (1-119)||(8654200-8654320)
chr8 (12-118)||(11639055-11639163)
chr8 (1-119)||(23244517-23244637)
chr8 (1-110)||(40032437-40032549)
chr8 (16-110)||(44254876-44254972)
chr8 (36-118)||(8653939-8654022)
chr8 (1-110)||(9495287-9495398)
chr8 (28-110)||(16645840-16645923)
chr8 (27-107)||(758635-758716)
chr8 (28-108)||(3868957-3869038)
chr8 (12-110)||(6844715-6844815)
chr8 (1-119)||(39240283-39240403)
chr8 (1-118)||(1825813-1825931)
chr8 (1-118)||(1860258-1860376)
chr8 (1-118)||(5416815-5416934)
chr8 (12-118)||(12873323-12873429)
chr8 (1-110)||(39911928-39912039)
chr8 (2-110)||(7041894-7041999)
chr8 (1-117)||(40094739-40094857)
chr8 (45-110)||(44678328-44678394)
chr8 (31-119)||(29026970-29027063)
chr8 (12-118)||(33542387-33542495)
chr8 (1-102)||(119380-119483)
chr8 (13-110)||(14920422-14920521)
chr8 (36-118)||(26217073-26217156)
chr8 (1-118)||(26736389-26736508)
chr8 (10-109)||(410635-410736)
chr8 (1-102)||(12873076-12873179)
chr8 (45-110)||(28206777-28206843)
chr8 (12-77)||(44255137-44255203)
chr8 (45-118)||(44678522-44678595)
chr8 (46-110)||(5525882-5525947)
chr8 (3-67)||(30568331-30568396)
chr8 (46-110)||(35486173-35486238)
chr8 (31-110)||(30873073-30873153)
chr8 (12-118)||(36343965-36344072)
chr8 (12-62)||(18914320-18914371)
chr8 (1-67)||(44678448-44678515)
chr8 (36-109)||(15740625-15740699)
chr8 (45-110)||(28207062-28207128)
chr8 (36-121)||(36344261-36344347)
[»] chr4 (85 HSPs)
chr4 (10-118)||(52914955-52915065)
chr4 (28-118)||(9010797-9010888)
chr4 (1-110)||(46200495-46200606)
chr4 (1-118)||(48209951-48210070)
chr4 (1-110)||(54136102-54136213)
chr4 (1-107)||(4965885-4965993)
chr4 (1-118)||(27347600-27347719)
chr4 (1-118)||(29864439-29864558)
chr4 (1-110)||(33626128-33626239)
chr4 (1-125)||(25218080-25218206)
chr4 (1-124)||(2738877-2739002)
chr4 (12-110)||(21218122-21218222)
chr4 (1-110)||(9010516-9010627)
chr4 (1-110)||(33882213-33882324)
chr4 (1-118)||(45911838-45911957)
chr4 (2-110)||(33625875-33625985)
chr4 (2-110)||(44432889-44432999)
chr4 (12-119)||(37515728-37515837)
chr4 (28-119)||(8247038-8247130)
chr4 (1-119)||(46621191-46621311)
chr4 (13-110)||(21217858-21217957)
chr4 (1-118)||(8246772-8246889)
chr4 (10-118)||(45683120-45683230)
chr4 (12-119)||(1157481-1157590)
chr4 (1-116)||(12381318-12381435)
chr4 (12-110)||(10014476-10014575)
chr4 (12-110)||(10021617-10021716)
chr4 (31-118)||(11242759-11242847)
chr4 (1-119)||(45911581-45911701)
chr4 (1-102)||(29864195-29864298)
chr4 (1-118)||(34958835-34958953)
chr4 (1-118)||(46535526-46535644)
chr4 (2-110)||(43317144-43317254)
chr4 (10-110)||(44710414-44710516)
chr4 (2-110)||(46620938-46621048)
chr4 (1-109)||(53645463-53645573)
chr4 (12-119)||(24504215-24504324)
chr4 (10-109)||(52915216-52915317)
chr4 (1-110)||(18862704-18862816)
chr4 (1-119)||(25058835-25058955)
chr4 (1-110)||(8751298-8751409)
chr4 (1-118)||(9657670-9657789)
chr4 (1-118)||(25593355-25593474)
chr4 (1-118)||(38866401-38866520)
chr4 (1-118)||(40067351-40067470)
chr4 (1-118)||(43316883-43317001)
chr4 (12-100)||(27347872-27347962)
chr4 (10-110)||(44710676-44710778)
chr4 (10-118)||(54191857-54191967)
chr4 (36-108)||(1205391-1205464)
chr4 (1-120)||(29970194-29970314)
chr4 (1-108)||(34959095-34959204)
chr4 (1-99)||(25218348-25218448)
chr4 (12-118)||(32384656-32384764)
chr4 (1-119)||(32385076-32385195)
chr4 (12-118)||(40067623-40067731)
chr4 (1-110)||(28570685-28570796)
chr4 (10-124)||(1157200-1157319)
chr4 (1-119)||(22831061-22831182)
chr4 (12-110)||(1205652-1205752)
chr4 (1-119)||(4793863-4793982)
chr4 (1-118)||(9657911-9658030)
chr4 (17-110)||(10014743-10014838)
chr4 (17-110)||(10021884-10021979)
chr4 (1-118)||(43969791-43969910)
chr4 (12-119)||(38866674-38866784)
chr4 (46-118)||(44169982-44170055)
chr4 (1-77)||(44428616-44428693)
chr4 (1-73)||(54191637-54191710)
chr4 (31-110)||(46200780-46200860)
chr4 (10-110)||(22830807-22830910)
chr4 (12-109)||(25977781-25977880)
chr4 (1-118)||(45683381-45683500)
chr4 (46-119)||(11102285-11102359)
chr4 (2-118)||(21051362-21051480)
chr4 (12-77)||(21051622-21051688)
chr4 (2-86)||(21885089-21885174)
chr4 (45-119)||(15985468-15985543)
chr4 (10-68)||(24503993-24504052)
chr4 (1-101)||(4966132-4966234)
chr4 (45-110)||(44170290-44170356)
chr4 (1-69)||(42779573-42779642)
chr4 (38-110)||(44428524-44428597)
chr4 (1-118)||(46535786-46535905)
chr4 (17-99)||(37515550-37515634)
[»] chr3 (109 HSPs)
chr3 (1-119)||(34629984-34630104)
chr3 (1-110)||(34521277-34521388)
chr3 (1-110)||(45871708-45871819)
chr3 (12-110)||(7274918-7275017)
chr3 (1-118)||(10756721-10756840)
chr3 (1-110)||(26332330-26332441)
chr3 (1-110)||(54107680-54107791)
chr3 (2-118)||(28688255-28688373)
chr3 (1-119)||(12123343-12123463)
chr3 (13-119)||(40410714-40410822)
chr3 (1-119)||(41208403-41208523)
chr3 (12-118)||(41997822-41997930)
chr3 (16-118)||(54081563-54081667)
chr3 (1-110)||(4846860-4846971)
chr3 (1-110)||(12123101-12123212)
chr3 (1-110)||(15862439-15862550)
chr3 (1-110)||(43899122-43899233)
chr3 (1-110)||(45871953-45872064)
chr3 (1-109)||(7743029-7743139)
chr3 (28-125)||(21169662-21169760)
chr3 (2-110)||(41208665-41208775)
chr3 (10-118)||(44069396-44069506)
chr3 (14-110)||(52609639-52609737)
chr3 (1-108)||(52606141-52606250)
chr3 (13-119)||(34521533-34521641)
chr3 (28-119)||(35753723-35753815)
chr3 (1-110)||(7937827-7937938)
chr3 (1-110)||(27940283-27940394)
chr3 (1-110)||(44069134-44069245)
chr3 (1-118)||(45171071-45171190)
chr3 (1-110)||(45171331-45171442)
chr3 (1-110)||(50819231-50819342)
chr3 (1-110)||(50856522-50856633)
chr3 (1-110)||(53841290-53841401)
chr3 (13-110)||(54108396-54108495)
chr3 (12-119)||(35580224-35580333)
chr3 (12-119)||(54081286-54081394)
chr3 (12-110)||(15862193-15862293)
chr3 (1-110)||(26332582-26332697)
chr3 (1-119)||(40926013-40926133)
chr3 (1-110)||(19124200-19124311)
chr3 (10-119)||(37133279-37133390)
chr3 (1-110)||(43899338-43899449)
chr3 (10-118)||(28691117-28691227)
chr3 (2-117)||(22354946-22355063)
chr3 (12-119)||(28691388-28691497)
chr3 (4-119)||(40969521-40969638)
chr3 (13-119)||(17274052-17274160)
chr3 (1-110)||(7950286-7950397)
chr3 (1-110)||(8846340-8846451)
chr3 (28-118)||(14353339-14353430)
chr3 (13-118)||(19124448-19124554)
chr3 (36-110)||(35753414-35753489)
chr3 (2-110)||(8846087-8846197)
chr3 (10-110)||(31513874-31513976)
chr3 (46-118)||(46766924-46766997)
chr3 (12-110)||(31514137-31514237)
chr3 (12-118)||(40639392-40639500)
chr3 (2-119)||(5348581-5348700)
chr3 (36-118)||(9028194-9028277)
chr3 (2-119)||(33812726-33812845)
chr3 (2-123)||(40926276-40926398)
chr3 (2-118)||(10756973-10757091)
chr3 (57-118)||(41998135-41998197)
chr3 (10-118)||(47891516-47891626)
chr3 (10-110)||(50819490-50819592)
chr3 (10-110)||(50856272-50856374)
chr3 (3-102)||(53678699-53678800)
chr3 (46-125)||(7937639-7937719)
chr3 (36-119)||(14353048-14353132)
chr3 (12-110)||(17273788-17273888)
chr3 (12-87)||(28688025-28688101)
chr3 (12-110)||(40969266-40969366)
chr3 (16-110)||(51170660-51170756)
chr3 (45-119)||(2078781-2078856)
chr3 (1-87)||(17102641-17102728)
chr3 (45-123)||(33773100-33773179)
chr3 (36-110)||(33812843-33812918)
chr3 (12-117)||(49222040-49222147)
chr3 (33-110)||(13866961-13867039)
chr3 (12-120)||(29248583-29248693)
chr3 (12-77)||(35753477-35753543)
chr3 (33-110)||(49529117-49529195)
chr3 (45-118)||(51311827-51311901)
chr3 (15-98)||(27254007-27254092)
chr3 (1-124)||(53678430-53678555)
chr3 (14-73)||(17102433-17102493)
chr3 (10-77)||(22444459-22444527)
chr3 (1-119)||(47891777-47891897)
chr3 (33-108)||(52705472-52705548)
chr3 (16-87)||(53310001-53310073)
chr3 (45-119)||(2829409-2829484)
chr3 (10-72)||(29248369-29248432)
chr3 (45-119)||(51885673-51885748)
chr3 (13-110)||(52268380-52268478)
chr3 (2-84)||(53841065-53841148)
chr3 (45-118)||(5348877-5348951)
chr3 (46-119)||(21918499-21918573)
chr3 (1-118)||(43844362-43844482)
chr3 (12-102)||(51883878-51883970)
chr3 (31-102)||(54247290-54247362)
chr3 (1-118)||(2078484-2078605)
chr3 (36-87)||(22444242-22444293)
chr3 (13-118)||(38911494-38911601)
chr3 (57-110)||(7274664-7274718)
chr3 (10-118)||(37133488-37133598)
chr3 (3-119)||(40639119-40639237)
chr3 (2-69)||(7742828-7742896)
chr3 (1-49)||(43527249-43527297)
[»] scaffold0809 (2 HSPs)
scaffold0809 (1-110)||(4582-4693)
scaffold0809 (1-119)||(4340-4460)
[»] chr7 (59 HSPs)
chr7 (1-118)||(11678966-11679085)
chr7 (1-110)||(18731030-18731141)
chr7 (1-118)||(34568586-34568705)
chr7 (1-110)||(8769546-8769657)
chr7 (1-110)||(23472820-23472931)
chr7 (1-119)||(8769284-8769404)
chr7 (1-110)||(10625348-10625459)
chr7 (1-110)||(35085750-35085861)
chr7 (1-110)||(47250810-47250921)
chr7 (12-119)||(39118012-39118121)
chr7 (1-111)||(9230941-9231053)
chr7 (1-110)||(2357078-2357189)
chr7 (1-110)||(5238462-5238573)
chr7 (1-118)||(9034579-9034698)
chr7 (1-118)||(31715636-31715755)
chr7 (1-110)||(44485596-44485707)
chr7 (10-118)||(2357328-2357438)
chr7 (12-110)||(31715896-31715996)
chr7 (1-110)||(11678714-11678825)
chr7 (1-118)||(24119717-24119836)
chr7 (1-119)||(28349645-28349764)
chr7 (1-118)||(34568848-34568971)
chr7 (36-118)||(48704108-48704191)
chr7 (10-118)||(32707004-32707114)
chr7 (1-109)||(41758691-41758801)
chr7 (1-110)||(47251161-47251271)
chr7 (12-119)||(43140700-43140809)
chr7 (1-119)||(21522482-21522600)
chr7 (1-110)||(23437163-23437274)
chr7 (1-110)||(32706743-32706854)
chr7 (1-110)||(35086004-35086115)
chr7 (1-110)||(43726506-43726617)
chr7 (1-110)||(44486196-44486307)
chr7 (1-118)||(47305130-47305249)
chr7 (15-119)||(43726246-43726351)
chr7 (10-110)||(44448185-44448287)
chr7 (2-78)||(9230720-9230797)
chr7 (12-110)||(21522231-21522329)
chr7 (12-84)||(26920192-26920265)
chr7 (1-108)||(47250570-47250679)
chr7 (1-119)||(37144027-37144147)
chr7 (1-98)||(473444-473543)
chr7 (1-118)||(37143767-37143885)
chr7 (10-72)||(38842082-38842144)
chr7 (1-77)||(47250942-47251020)
chr7 (47-118)||(10625109-10625181)
chr7 (1-118)||(22338275-22338395)
chr7 (12-118)||(23472596-23472704)
chr7 (12-118)||(36507084-36507192)
chr7 (1-98)||(15326895-15326994)
chr7 (18-110)||(473203-473297)
chr7 (45-118)||(38842330-38842404)
chr7 (14-110)||(44447925-44448022)
chr7 (2-119)||(38676060-38676180)
chr7 (33-109)||(4156550-4156627)
chr7 (45-110)||(22338585-22338651)
chr7 (1-78)||(23437416-23437494)
chr7 (33-118)||(28263499-28263585)
chr7 (57-108)||(19543503-19543555)
[»] chr6 (51 HSPs)
chr6 (1-118)||(33545086-33545205)
chr6 (15-116)||(24605151-24605254)
chr6 (1-119)||(25551600-25551720)
chr6 (1-110)||(1860750-1860860)
chr6 (1-119)||(24604877-24604996)
chr6 (1-119)||(33544824-33544944)
chr6 (1-110)||(3338488-3338599)
chr6 (1-118)||(25551350-25551469)
chr6 (1-110)||(29009965-29010076)
chr6 (4-116)||(1158593-1158707)
chr6 (10-118)||(9173904-9174014)
chr6 (12-118)||(3338750-3338858)
chr6 (1-119)||(6220058-6220178)
chr6 (10-110)||(33329217-33329319)
chr6 (2-98)||(33346501-33346599)
chr6 (12-119)||(31029526-31029635)
chr6 (15-118)||(32283029-32283134)
chr6 (10-108)||(11524778-11524878)
chr6 (1-110)||(3288941-3289052)
chr6 (1-102)||(6220320-6220423)
chr6 (36-118)||(11524708-11524791)
chr6 (1-118)||(12903224-12903343)
chr6 (2-102)||(14337167-14337269)
chr6 (10-98)||(35119084-35119174)
chr6 (46-118)||(13155842-13155915)
chr6 (46-118)||(13160698-13160771)
chr6 (1-119)||(13156103-13156218)
chr6 (1-119)||(13160959-13161074)
chr6 (13-110)||(3289186-3289285)
chr6 (1-110)||(14336913-14337024)
chr6 (1-110)||(35132612-35132723)
chr6 (1-109)||(7537869-7537979)
chr6 (36-110)||(2949307-2949382)
chr6 (1-110)||(19135710-19135821)
chr6 (1-117)||(2814575-2814693)
chr6 (1-110)||(11525030-11525140)
chr6 (1-109)||(24548505-24548615)
chr6 (1-77)||(33972470-33972547)
chr6 (10-77)||(2949564-2949632)
chr6 (36-110)||(1158890-1158964)
chr6 (1-108)||(2315592-2315701)
chr6 (11-110)||(29010228-29010329)
chr6 (34-110)||(33548156-33548232)
chr6 (28-87)||(12903503-12903562)
chr6 (1-110)||(24548252-24548363)
chr6 (33-110)||(17245621-17245699)
chr6 (33-109)||(6229684-6229760)
chr6 (10-118)||(29999676-29999786)
chr6 (15-110)||(31029802-31029899)
chr6 (45-108)||(17544762-17544826)
chr6 (63-118)||(35132917-35132973)
[»] chr5 (72 HSPs)
chr5 (10-110)||(7399088-7399190)
chr5 (1-119)||(12593720-12593840)
chr5 (1-119)||(19205207-19205327)
chr5 (1-119)||(41859941-41860063)
chr5 (12-109)||(31656370-31656469)
chr5 (1-118)||(42710614-42710733)
chr5 (1-109)||(7399342-7399452)
chr5 (12-119)||(15476268-15476377)
chr5 (15-110)||(33763186-33763282)
chr5 (13-110)||(8418460-8418559)
chr5 (1-118)||(9692922-9693040)
chr5 (1-118)||(31656622-31656741)
chr5 (1-110)||(35263758-35263869)
chr5 (10-110)||(334307-334409)
chr5 (28-125)||(5624375-5624473)
chr5 (10-110)||(16353427-16353529)
chr5 (12-108)||(17736522-17736620)
chr5 (2-110)||(35263505-35263615)
chr5 (1-118)||(28392033-28392153)
chr5 (12-110)||(39706326-39706426)
chr5 (1-110)||(5087818-5087929)
chr5 (1-110)||(7210467-7210578)
chr5 (1-110)||(9693182-9693293)
chr5 (1-110)||(33699286-33699397)
chr5 (1-118)||(36751905-36752024)
chr5 (1-118)||(31908931-31909052)
chr5 (3-118)||(5152881-5152998)
chr5 (12-118)||(10656097-10656205)
chr5 (1-118)||(3878484-3878603)
chr5 (1-118)||(5088392-5088511)
chr5 (1-106)||(7210709-7210816)
chr5 (13-110)||(12694962-12695061)
chr5 (31-109)||(21750822-21750901)
chr5 (10-110)||(28391779-28391882)
chr5 (1-118)||(38416398-38416517)
chr5 (10-110)||(10656367-10656469)
chr5 (10-110)||(15267513-15267615)
chr5 (29-110)||(32272133-32272215)
chr5 (46-118)||(5460191-5460264)
chr5 (1-108)||(15476523-15476632)
chr5 (12-119)||(41372433-41372542)
chr5 (15-118)||(43570049-43570154)
chr5 (12-110)||(18514299-18514399)
chr5 (28-119)||(25923120-25923212)
chr5 (1-111)||(26289030-26289142)
chr5 (2-110)||(29023948-29024055)
chr5 (1-118)||(17861042-17861160)
chr5 (28-110)||(40589346-40589429)
chr5 (28-110)||(40589949-40590032)
chr5 (1-110)||(40774349-40774459)
chr5 (15-119)||(15267244-15267349)
chr5 (12-119)||(31909205-31909314)
chr5 (12-110)||(40589065-40589165)
chr5 (12-110)||(40589668-40589768)
chr5 (10-119)||(15670424-15670535)
chr5 (1-101)||(33762922-33763027)
chr5 (10-110)||(36752175-36752276)
chr5 (12-110)||(12593467-12593567)
chr5 (12-110)||(14143780-14143880)
chr5 (36-118)||(16353154-16353240)
chr5 (12-110)||(40774612-40774712)
chr5 (1-110)||(8418212-8418322)
chr5 (28-110)||(26289313-26289395)
chr5 (62-119)||(5460272-5460330)
chr5 (57-110)||(19204955-19205009)
chr5 (18-110)||(3879295-3879387)
chr5 (1-99)||(38416165-38416265)
chr5 (28-110)||(39706066-39706145)
chr5 (10-68)||(42710404-42710463)
chr5 (33-118)||(19185545-19185631)
chr5 (1-77)||(25923383-25923460)
chr5 (45-110)||(5152627-5152693)
[»] scaffold0188 (2 HSPs)
scaffold0188 (13-119)||(13817-13925)
scaffold0188 (12-110)||(13553-13652)
[»] scaffold0236 (2 HSPs)
scaffold0236 (1-106)||(11228-11335)
scaffold0236 (1-102)||(11478-11581)
[»] scaffold0051 (2 HSPs)
scaffold0051 (1-110)||(40616-40727)
scaffold0051 (1-118)||(40355-40474)
[»] scaffold0168 (2 HSPs)
scaffold0168 (27-110)||(11778-11862)
scaffold0168 (28-110)||(11499-11582)
[»] scaffold0045 (4 HSPs)
scaffold0045 (1-110)||(65750-65861)
scaffold0045 (1-110)||(73082-73193)
scaffold0045 (10-123)||(66012-66127)
scaffold0045 (10-123)||(73344-73459)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-110)||(177329-177440)
[»] scaffold1436 (2 HSPs)
scaffold1436 (17-110)||(1487-1582)
scaffold1436 (12-77)||(1750-1815)
[»] scaffold0016 (2 HSPs)
scaffold0016 (1-110)||(90816-90927)
scaffold0016 (1-72)||(91772-91844)
[»] scaffold0128 (1 HSPs)
scaffold0128 (12-110)||(45111-45211)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-118)||(93191-93312)
[»] scaffold0444 (2 HSPs)
scaffold0444 (1-77)||(11713-11790)
scaffold0444 (38-110)||(11650-11723)
[»] scaffold0225 (1 HSPs)
scaffold0225 (36-109)||(10920-10994)
[»] scaffold0193 (1 HSPs)
scaffold0193 (45-108)||(25980-26044)


Alignment Details
Target: chr2 (Bit Score: 158; Significance: 3e-84; HSPs: 94)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 27476489 - 27476280
Alignment:
Q  1 ctaacggataggaccaaaa-tgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagtta 97  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||      
T  27476489 ctaacggataggaccaaaaatgtgtaaaggagagaatttaagggaccaaaataaatcgaattttaattaagggaacaaagcgatactacctaaatagtct 27476390  T
Q  98 agggaccaaaaatataatttaatcaatttatgaatataagtttacttttgtatcttcaaaactaactcactactcatgtggtgttgaatgagatagtgtt 197  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27476389 agggaccaaaaatacaatttaatcaatttatgaatattagtttacttttgtatcttcaaaactaactcactactcatgtggtgttgaatgagatagtgtt 27476290  T
Q  198 gatgatgtcc 207  Q
    |||| |||||    
T  27476289 gatgttgtcc 27476280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 39454573 - 39454462
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  39454573 ctaacggaaatgaccaaaatgtgtaacggagagaagttaagggatcaaaataaatcgaattttaattaagggaccaaagtgatactacttaaatagttaa 39454474  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  39454473 gggaccaaaaat 39454462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 119
Target Start/End: Complemental strand, 27132629 - 27132513
Alignment:
Q  5 cggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaaggga 102  Q
    |||| ||||||||||||||||| || ||||| |||||||| ||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  27132629 cggaaaggaccaaaatgtgtaacgaagagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagcgatactacctaaatagttaaggga 27132530  T
Q  103 ccaaaaatataatttaa 119  Q
    ||||||||| |||||||    
T  27132529 ccaaaaatacaatttaa 27132513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 37744560 - 37744452
Alignment:
Q  12 gaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| || ||||| |||||||||||||||||||| |||||||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  37744560 gaccaaaatgtgtaacgaagagaagttaagggatcaaaataaatcaaattttaattaagggaccaaagtgatactacctaaatagttaagggaccaaaaa 37744461  T
Q  110 tataattta 118  Q
    | |||||||    
T  37744460 tgtaattta 37744452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 41377476 - 41377358
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  41377476 ctaacggaaaggaccaaaatctgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaa 41377377  T
Q  99 gggaccaaaaatataattta 118  Q
     |||||||||||| ||||||    
T  41377376 -ggaccaaaaatacaattta 41377358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 16736214 - 16736112
Alignment:
Q  10 aggaccaaaatgtgtaaa-gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    |||||||||||||||||  ||||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  16736214 aggaccaaaatgtgtaactgagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaa 16736115  T
Q  108 aat 110  Q
    |||    
T  16736114 aat 16736112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 34820543 - 34820663
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| | |||||| |||||||| ||||||||||| ||||||| |||||||| ||||| || |||| ||||||||||||    
T  34820543 ctaacggaaaggaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcaaattttagttaagggaccaaagcgagactacctaaatagttaa 34820642  T
Q  99 gggaccaaaaatataatttaa 119  Q
    ||||||||||||| |||||||    
T  34820643 gggaccaaaaatacaatttaa 34820663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 4104281 - 4104170
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||| ||| |||||||| |||||  | |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  4104281 ctaacggaaaggaccaaaatgtataacagagagaagttaagataccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaa 4104182  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  4104181 gggaccaaaaat 4104170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 4104423 - 4104542
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| |||||| |||||| ||| | |||||| |||||| | |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  4104423 ctaacggaaaggacccaaatgtataacggagagaagttaaggaaccaaaataaatcgaattttaattaagggatcaaagcgatactacctaaatagttaa 4104522  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||| ||||||    
T  4104523 gggaccaaaaatacaattta 4104542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 12303907 - 12303796
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| |||||  | |||||||| ||||||||||||||||||||||||| || ||||| ||||||| ||||||||||||    
T  12303907 ctaacggaaaggaccaaaatgtgtaacagagatgagttaagggaccaaaataaatcgaattttaattaagtgaccaaagcgatactacctaaatagttaa 12303808  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  12303807 gggaccaaaaat 12303796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 13354441 - 13354560
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    ||||| || |||||||| |||||||| || ||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  13354441 ctaacagaaaggaccaatatgtgtaacgaagagaagttaagggaccaaaataaatcgaattttaattaagggatcaaagcgatactacctaaatagttaa 13354540  T
Q  99 gggaccaaaaatataattta 118  Q
    |||||||||| || ||||||    
T  13354541 gggaccaaaattacaattta 13354560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 28631385 - 28631278
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||||| |||||| ||||||||  ||||||||||||||||||||||||||| ||||| ||| ||| |||||||||||||||||||||||    
T  28631385 gaccaaaatgtgtaaaggagagaagttaagggactaaaataaatcgaattttaattaagggaccaaagcgatgctacctaaatagttaagggaccaaaaa 28631286  T
Q  110 tataattt 117  Q
    | ||||||    
T  28631285 tgtaattt 28631278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 31450788 - 31450677
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    ||||| || ||||||||||||||||| |||||||| |||||||| ||||||||||||||||||| |||| ||| ||||| ||||||| ||||||||||||    
T  31450788 ctaacagaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttagttaaaggaccaaagcgatactacctaaatagttaa 31450689  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  31450688 gggaccaaaaat 31450677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 34127829 - 34127947
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| ||||||||| ||||||| |||||||| ||||||||||||||||||||||| |||| |||||||| ||||| |||||||| |||||||||||    
T  34127829 ctaacggaaaggaccaaa-tgtgtaacagagagaagttaagggatcaaaataaatcgaactttagttaagggaccaaagcgatactacttaaatagttaa 34127927  T
Q  99 gggaccaaaaatataattta 118  Q
    ||| ||||||||| ||||||    
T  34127928 gggtccaaaaatacaattta 34127947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 16655728 - 16655610
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| |||||||||||||| || |||||||| |||| ||| |||||||||||||||||||||||| ||| ||||  ||||||| ||||||||||||    
T  16655728 ctaacggaaaggaccaaaatgtgcaacagagagaagttaaaggaccaaaataaatcgaattttaattaaaggaccaaaatgatactacctaaatagttaa 16655629  T
Q  99 gggaccaaaaatataattt 117  Q
    ||||||||||||| |||||    
T  16655628 gggaccaaaaatacaattt 16655610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 28203125 - 28203235
Alignment:
Q  2 taacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    ||||||| | ||||||||||||||| |||||||| |||| ||| |||||||||||||||||||||||||||| ||||| ||||| | |||||||||||||    
T  28203125 taacggaaatgaccaaaatgtgtaacagagagaagttaaaggaccaaaataaatcgaattttaattaagggaccaaagcgatacgacctaaatagttaag 28203224  T
Q  100 ggaccaaaaat 110  Q
    |||||||||||    
T  28203225 ggaccaaaaat 28203235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 28631538 - 28631658
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||| ||||||||||| |||||||| ||||||||  |||||||||||||||||||||||| || ||||| ||||||| | ||||||||||    
T  28631538 ctaacggaaatgacgaaaatgtgtaacagagagaagttaagggactaaaataaatcgaattttaattaagagagcaaagcgatactacccaaatagttaa 28631637  T
Q  99 gggaccaaaaatataatttaa 119  Q
    ||||||||||||| |||||||    
T  28631638 gggaccaaaaatacaatttaa 28631658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 43183847 - 43183967
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| |||||||| ||||||||||| |||||||||||||||| ||||| ||||||| ||||||| ||||    
T  43183847 ctaacggaaatgaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagcgatactacctaaataattaa 43183946  T
Q  99 gggaccaaaaatataatttaa 119  Q
    ||||||||||||  |||||||    
T  43183947 gggaccaaaaatgcaatttaa 43183967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 13354299 - 13354188
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||| ||||| | |||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  13354299 ctaacggaaatgaccaaaatatgtaatggagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaa 13354200  T
Q  99 gggaccaaaaat 110  Q
    |||||| |||||    
T  13354199 gggaccgaaaat 13354188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 21470417 - 21470306
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    ||||| || ||||||||||||||||| |||||||| || ||||| |||||||||||||||||||||||||||| ||||| ||||||  ||||||||||||    
T  21470417 ctaacagaaaggaccaaaatgtgtaacagagagaagttgagggaccaaaataaatcgaattttaattaagggaccaaagtgatactgcctaaatagttaa 21470318  T
Q  99 gggaccaaaaat 110  Q
     |||||||||||    
T  21470317 aggaccaaaaat 21470306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 21470559 - 21470669
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| | |||||| |||||||| ||||||||||||||||||||||||||| || ||| ||||||| ||||||||||||    
T  21470559 ctaacggaaaggaccaaaatgtgtaacgtagagaagttaagggaccaaaataaatcgaattttaattaaggg-accaagcgatactacctaaatagttaa 21470657  T
Q  99 gggaccaaaaat 110  Q
    ||||| ||||||    
T  21470658 gggactaaaaat 21470669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 25642532 - 25642651
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | | |||| |||||||| ||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  25642532 ctaacggaaatgaccaaaatgtgtaacggaaagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagcgatactacctaaatagttaa 25642631  T
Q  99 gggaccaaaaatataattta 118  Q
    |||| |||||||| ||||||    
T  25642632 gggaacaaaaatacaattta 25642651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 27476631 - 27476742
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||| ||| ||||| |||||||| |||||||| |||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  27476631 ctaacggaaaggaccataatatgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaaacgatactacctaaatagttaa 27476730  T
Q  99 gggaccaaaaat 110  Q
    | ||||||||||    
T  27476731 gagaccaaaaat 27476742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 32933855 - 32933966
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| | |||||| |||||||| ||||||||||||||||||| |||| ||| ||||| |||| || ||||||||||||    
T  32933855 ctaacggaaaggaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcgaattttatttaaaggaccaaagcgatattacctaaatagttaa 32933954  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  32933955 gggaccaaaaat 32933966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 41659867 - 41659748
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    |||||||| ||| ||||||||||||| |||||||| |||||  | ||||||||||| |||||||||||||||| ||||| |||||| | |||||||||||    
T  41659867 ctaacggaaaggcccaaaatgtgtaacagagagaagttaagataccaaaataaatcaaattttaattaagggaccaaagcgatactaattaaatagttaa 41659768  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||| ||||||||||||||    
T  41659767 gggacaaaaaatataattta 41659748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 43183705 - 43183586
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    ||||| || ||||||||||||||||| |||||||  ||| |||| ||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  43183705 ctaacagaaaggaccaaaatgtgtaacagagagatgttatgggaccaaaataaatctaattttaattaagggaccaaagcgatactacctaaatagttaa 43183606  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||| |||||| |||||||    
T  43183605 gggactaaaaatgtaattta 43183586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 39912739 - 39912630
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaa 108  Q
    ||||||||||||||| ||||||||  |||| ||| |||||||||| ||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  39912739 gaccaaaatgtgtaacagagagaaagttaacggaccaaaataaattgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaa 39912640  T
Q  109 atataattta 118  Q
    ||| ||||||    
T  39912639 atacaattta 39912630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 20908786 - 20908894
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| ||| |||| |||| ||| |||||||||||||||||||||||  ||| ||||| ||||||| |||||||||||||||||||||||    
T  20908786 gaccaaaatgtgtaacagaaagaagttaaaggaccaaaataaatcgaattttaattagaggaccaaagcgatactacctaaatagttaagggaccaaaaa 20908885  T
Q  110 tataattta 118  Q
    || ||||||    
T  20908886 tacaattta 20908894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 34820390 - 34820290
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| |||||||| |||| ||| ||||||||||| |||||||||||||| | ||||| |||||||| ||||||||||||||||||||||    
T  34820390 gaccaaaatgtgtaacagagagaagttaaaggaccaaaataaatctaattttaattaaggaaccaaagcgatactacttaaatagttaagggaccaaaaa 34820291  T
Q  110 t 110  Q
    |    
T  34820290 t 34820290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 37744652 - 37744772
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||| | ||| |||||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  37744652 ctaacggaaatgaccaaaatctataagagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactatctaaatagttaa 37744751  T
Q  99 gggaccaaaaatataatttaa 119  Q
    || | |||||||  |||||||    
T  37744752 ggaatcaaaaatgcaatttaa 37744772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 38275599 - 38275479
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| ||||||||||||||||| |||| ||| |||| | | ||||||||||| |||||||||||||||| |||||  ||||||| |||||||||||    
T  38275599 ctaacggaaaggaccaaaatgtgtaatagagggaagttaaagaaccaaaataaatcaaattttaattaagggaccaaagcaatactacataaatagttaa 38275500  T
Q  99 gggaccaaaaatataatttaa 119  Q
    |||| |||||||| |||||||    
T  38275499 gggatcaaaaatacaatttaa 38275479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 41377629 - 41377729
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | |||||| |||||||| ||||||||||| ||||||||||| |||| ||||| ||||||| |||||||||||||||||||||||    
T  41377629 gaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcaaattttaattacgggaccaaagtgatactacctaaatagttaagggaccaaaaa 41377728  T
Q  110 t 110  Q
    |    
T  41377729 t 41377729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 5961791 - 5961680
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    ||||| || ||||||||||||||||| |||||||| |||||||| ||||||||||| | ||||||||| |||| ||||| ||||||| ||||||||||||    
T  5961791 ctaacagaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcaatttttaattatgggatcaaagcgatactacctaaatagttaa 5961692  T
Q  99 gggaccaaaaat 110  Q
    ||| ||||||||    
T  5961691 ggggccaaaaat 5961680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 16655879 - 16655990
Alignment:
Q  10 aggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaa 107  Q
    ||||||||||||||||| | |||||| |||||||| ||||||||||| ||||||| |||| ||| ||||  |||||||| ||||||||||||||||||||    
T  16655879 aggaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcaaattttagttaaaggaccaaaacgatactacctaaatagttaagggaccaaa 16655978  T
Q  108 aatataatttaa 119  Q
    |||| |||||||    
T  16655979 aatacaatttaa 16655990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 17856321 - 17856210
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagag-agaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | |||||||||||||||  || |||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||| ||||    
T  17856321 ctaacggaaaagaccaaaatgtgtaacaaggagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaataattaa 17856222  T
Q  99 gggaccaaaaat 110  Q
    |||||| |||||    
T  17856221 gggaccgaaaat 17856210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18565188 - 18565077
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| |||||||| ||||||||||||||||||||||||||||  |||| ||||||  ||||||||||||    
T  18565188 ctaacggaaatgaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttaattaagggactaaagcgatactgcctaaatagttaa 18565089  T
Q  99 gggaccaaaaat 110  Q
    | ||||||||||    
T  18565088 gagaccaaaaat 18565077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 27883590 - 27883479
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| |||||||| ||||||||||||||||||| |||||||| ||||| |||| ||| |||||||||||    
T  27883590 ctaacggaaatgaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttacttaagggaccaaagcgatattacttaaatagttaa 27883491  T
Q  99 gggaccaaaaat 110  Q
    ||||| ||||||    
T  27883490 gggacaaaaaat 27883479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 31450930 - 31451041
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    ||||| || ||||||||||||||||| | |||||| |||| ||||||||||||||||||||||| |||||||| ||||  ||||||| ||||||||||||    
T  31450930 ctaacagaaaggaccaaaatgtgtaacgtagagaagttaaaggatcaaaataaatcgaattttagttaagggaccaaatcgatactacctaaatagttaa 31451029  T
Q  99 gggaccaaaaat 110  Q
    |||| |||||||    
T  31451030 gggatcaaaaat 31451041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 35408785 - 35408904
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    |||||||| ||||||||||||||||| |||||||| |||||  | ||||||||||| |||||||||||||| | ||||| |||||| | |||||||||||    
T  35408785 ctaacggaaaggaccaaaatgtgtaacagagagaagttaagataccaaaataaatcaaattttaattaaggaaccaaagcgatactaattaaatagttaa 35408884  T
Q  99 gggaccaaaaatataattta 118  Q
     |||||||||| ||||||||    
T  35408885 tggaccaaaaacataattta 35408904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 37412842 - 37412953
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| | ||||||||||||||| |||||||| |||| ||| |||||||||| ||||||||||||||||| ||| | |||||||| |||||||||||    
T  37412842 ctaacggaaatgaccaaaatgtgtaacagagagaagttaatggaccaaaataaattgaattttaattaagggaccaatgcgatactacttaaatagttaa 37412941  T
Q  99 gggaccaaaaat 110  Q
    ||| ||||||||    
T  37412942 ggggccaaaaat 37412953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 4121041 - 4121147
Alignment:
Q  15 caaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatat 112  Q
    |||| ||||||| |||||||| |||||||| |||||||||||||||||||||||| ||| ||||  ||||||| ||||||||||||||||||||||||      
T  4121041 caaagtgtgtaatagagagaagttaagggaccaaaataaatcgaattttaattaaaggaccaaaacgatactacctaaatagttaagggaccaaaaatgc 4121140  T
Q  113 aatttaa 119  Q
    |||||||    
T  4121141 aatttaa 4121147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 38275719 - 38275832
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaat--ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagtt 96  Q
    |||||||| | ||||||||||||||| ||||||||   ||| |||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  38275719 ctaacggaaatgaccaaaatgtgtaacagagagaagagttacgggaccaaaataaatcgaattttaattaagggatcaaagtgatactacctaaatagtt 38275818  T
Q  97 aagggaccaaaaat 110  Q
    ||||||| ||||||    
T  38275819 aagggacaaaaaat 38275832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 16736362 - 16736471
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| |||||||| |||||||| | ||||||||||||||||||||||||||  | || ||||| | ||||| ||||||    
T  16736362 ctaacggaaaggaccaaaatgtgtaacagagagaagttaagggaccgaaataaatcgaattttaattaagggactacagcgatacaacctaaacagttaa 16736461  T
Q  99 gggaccaaaa 108  Q
    ||||||||||    
T  16736462 gggaccaaaa 16736471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 32933713 - 32933593
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| ||||  || |||||||||| |||||||| |||||||| ||||| |||||||| |||||||||||    
T  32933713 ctaacggaaatgaccaaaatgtgtaacaaagagaagttaaaagaccaaaataaatggaattttagttaagggatcaaagtgatactacctaaatagttaa 32933614  T
Q  99 gggaccaaaaatataatttaa 119  Q
    ||||||||||||  |||||||    
T  32933613 gggaccaaaaatgcaatttaa 32933593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 36442413 - 36442517
Alignment:
Q  16 aaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatata 113  Q
    ||||||||||| ||| |||| |||| ||||||||||||||  |||||||||||| ||| |||||  |||||| |||||||||||||||||||||||||||    
T  36442413 aaaatgtgtaacagaaagaagttaaaggatcaaaataaattaaattttaattaaaggatcaaagcaatactatctaaatagttaagggaccaaaaatata 36442512  T
Q  114 attta 118  Q
    |||||    
T  36442513 attta 36442517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12304049 - 12304160
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | | ||||||||||||| || ||||| ||||| || |||||||||||||||||||||||| |||  |||| ||||||| ||||||||||||    
T  12304049 ctaacggaaatggccaaaatgtgtaacgaagagaagttaagagaccaaaataaatcgaattttaattaaaggacgaaagcgatactacctaaatagttaa 12304148  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  12304149 gggaccaaaaat 12304160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 20908633 - 20908514
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagaga-gaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| | || ||| |||||| |  |||||||||||||||||| |||| ||| ||||| ||||||| ||||||| ||||    
T  20908633 ctaacggaaaggaccaaaatgtgtaacgggaagaagttaaggaactaaaataaatcgaattttagttaaaggaccaaagcgatactacctaaataattaa 20908534  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||| ||||||    
T  20908533 gggaccaaaaatacaattta 20908514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 36211699 - 36211782
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataattta 118  Q
    |||||||| ||||||||||||||||||||||||||||  |||| ||||||| ||||||||||||| ||||||||||| ||||||    
T  36211699 ttaagggaccaaaataaatcgaattttaattaagggacgaaagcgatactacctaaatagttaagagaccaaaaatacaattta 36211782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 40694289 - 40694198
Alignment:
Q  28 gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaatataattta 118  Q
    ||||||| ||||||||  |||||||||||||| ||||||||||||  |||  |||||||| |||||||||||||||||||||||||||||||    
T  40694289 gagagaagttaagggactaaaataaatcgaatgttaattaagggactaaaacgatactacctaaatagttaagggaccaaaaatataattta 40694198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 44915861 - 44915742
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaag 99  Q
    |||||||| | ||||||||||||||| |||| || |||||  | ||||||||||| |||||||||||||||| ||||| |||||| | ||||||||||||    
T  44915861 ctaacggaaatgaccaaaatgtgtaaggagataagttaagataccaaaataaatcaaattttaattaagggaccaaagcgatactaattaaatagttaag 44915762  T
Q  100 ggaccaaaaatataatttaa 119  Q
    |||| ||||||  |||||||    
T  44915761 ggactaaaaatgcaatttaa 44915742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 14877591 - 14877494
Alignment:
Q  13 accaaaatgtgtaaagagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||||||||| ||||||| |||||||| |||||||||||||||||||||||| ||| ||||  ||||||| ||||||||||  ||||||||||||    
T  14877591 accaaaatgtgtaa-gagagaagttaagggaccaaaataaatcgaattttaattaatggaccaaatcgatactacctaaatagttttgggaccaaaaat 14877494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 18565276 - 18565378
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||||||||| ||||| || || || |||||| | |||||||||||||||||||||||||||| | ||| ||||||| |||||||||||||||||||||    
T  18565276 aggaccaaaatatgtaacagggaaaagttaaggaaccaaaataaatcgaattttaattaagggacccaagcgatactacctaaatagttaagggaccaaa 18565375  T
Q  108 aat 110  Q
    |||    
T  18565376 aat 18565378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 39912890 - 39913003
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac--taaatagtt 96  Q
    |||||||| | |||||||| |||||| ||||||||  |||||||| ||||||||||| |||||||||||||||| ||||| ||||||||   ||||||||    
T  39912890 ctaacggaaatgaccaaaaggtgtaacagagagaaagttaagggaccaaaataaatctaattttaattaagggaccaaagtgatactacctaaaatagtt 39912989  T
Q  97 aagggaccaaaaat 110  Q
    ||||||||||||||    
T  39912990 aagggaccaaaaat 39913003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 44612747 - 44612833
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta 86  Q
    |||||||| ||||||||||||||||| | |||||| ||||| || |||||||||||||||||||||||||||| ||||| |||||||    
T  44612747 ctaacggaaaggaccaaaatgtgtaacatagagaagttaagagaccaaaataaatcgaattttaattaagggaccaaagcgatacta 44612833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 25642390 - 25642273
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    ||||| || |||| |||||||||||| ||| | || ||||| || |||||||||||||||||||||||||| | ||||| |||||||| |||||||||||    
T  25642390 ctaactgaaaggatcaaaatgtgtaacagataaaagttaagagaccaaaataaatcgaattttaattaaggaaccaaagcgatactacttaaatagttaa 25642291  T
Q  99 gggaccaaaaatataatt 116  Q
    ||||| ||||||| ||||    
T  25642290 gggactaaaaatacaatt 25642273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 37412677 - 37412604
Alignment:
Q  38 aagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaat 110  Q
    |||||| ||||||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||||||||    
T  37412677 aagggaccaaaataaatcgaattttaattaagagaccaaagcgatactaactaaatagttaagggaccaaaaat 37412604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 4120875 - 4120775
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||| ||||| | |||||| |||| ||| |||||||||||||||||| ||||||||| ||||| ||||||| ||||||||||||||||| |||||    
T  4120875 gaccaaaatatgtaacggagagaaattaaaggaccaaaataaatcgaattttgattaagggaccaaagcgatactacctaaatagttaagggacaaaaaa 4120776  T
Q  110 t 110  Q
    |    
T  4120775 t 4120775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 10833310 - 10833410
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||| ||| |||||||| |||| ||| |||||||||||||||||||||| |||||  |||| ||||||| |||||||| ||||||||||||||    
T  10833310 gaccaaaatgtataacagagagaagttaatggaccaaaataaatcgaattttaattgagggactaaagcgatactacctaaatagctaagggaccaaaaa 10833409  T
Q  110 t 110  Q
    |    
T  10833410 t 10833410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 16261145 - 16261253
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | ||| ||  |||||||  |||||||||| ||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||    
T  16261145 gaccaaaatgtgtaacggagataagctaagggacaaaaataaatcaaattttagttaagggaccaaagcgatactacctaaatagttaagggaccaaaaa 16261244  T
Q  110 tataattta 118  Q
    || ||||||    
T  16261245 tacaattta 16261253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 34484310 - 34484418
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | ||| || |||||||| |||||||||||||||||||||||||  | ||||| ||||||| ||||||| ||||    
T  34484310 ctaacggaaatgaccaaaatgtgtaacggagataagttaagggaccaaaataaatcgaattttaattaagataccaaagcgatactacctaaataattaa 34484409  T
Q  99 gggaccaaa 107  Q
    |||||||||    
T  34484410 gggaccaaa 34484418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 39454712 - 39454808
Alignment:
Q  16 aaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    ||||||||||| |||||||| ||||||||  ||||||||||||||||||||||||| | ||||| ||||||| || |||||| ||||||||||||||    
T  39454712 aaaatgtgtaacagagagaaattaagggacaaaaataaatcgaattttaattaaggaatcaaagcgatactacctgaatagtcaagggaccaaaaat 39454808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12304418 - 12304529
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | | ||||||||||||| | |||||| ||||| || |||||||||||||||||||||||| ||| ||||| ||||||| |||||| |||||    
T  12304418 ctaacggaaatggccaaaatgtgtaacggagagaagttaagagaccaaaataaatcgaattttaattaaaggaccaaagcgatactacctaaattgttaa 12304517  T
Q  99 gggaccaaaaat 110  Q
    ||||| ||||||    
T  12304518 gggacaaaaaat 12304529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 20297496 - 20297421
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||| |||||||||||||||||||||||||||| ||||  ||||||| || |||||||||||||||||||||    
T  20297496 ttaagggaccaaaataaatcgaattttaattaagggaccaaaacgatactacctgaatagttaagggaccaaaaat 20297421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 28202970 - 28202871
Alignment:
Q  13 accaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||||||||| | | |||| |||| ||| ||| |||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||||||||    
T  28202970 accaaaatgtgtaacggatagaagttaaaggaccaatataaatcgaattttaattaagggaccaaagcgatattacctaaatagttaagggaccaaaaat 28202871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 16260983 - 16260882
Alignment:
Q  10 aggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||||||||||| ||| | |||||| |||| ||| ||||| ||||||||||||| |||||||| ||||| ||||||| |||||||||||||||||||||    
T  16260983 aggaccaaaatgtttaacggagagaagttaaaggaccaaaa-aaatcgaattttagttaagggaccaaagcgatactacctaaatagttaagggaccaaa 16260885  T
Q  108 aat 110  Q
    |||    
T  16260884 aat 16260882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 27246256 - 27246358
Alignment:
Q  10 aggaccaaaatgtgtaaagagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaa 107  Q
    ||||||||||||||||| |||||||  |||||  | ||||||||||| |||||||||||||||| ||||| ||| || | ||||||||||||||||||||    
T  27246256 aggaccaaaatgtgtaaggagagaaaattaagataccaaaataaatcaaattttaattaagggaccaaagcgatcctaattaaatagttaagggaccaaa 27246355  T
Q  108 aat 110  Q
    |||    
T  27246356 aat 27246358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 45389252 - 45389142
Alignment:
Q  2 taacggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    ||||||| ||||||||||||||||| || || || |||| ||| ||||||||||| |||||||||||||||| ||||  || |||| |||||||||| ||    
T  45389252 taacggaaaggaccaaaatgtgtaacgaagaaaagttaatggaccaaaataaatcaaattttaattaagggaccaaaacgacactacctaaatagttcag 45389153  T
Q  100 ggaccaaaaat 110  Q
    |||||||||||    
T  45389152 ggaccaaaaat 45389142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 15829842 - 15829733
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | |||||| |||||||| | | |||| |||||||| |||||||||| ||||||||||||||||| ||||| ||||||| |||||||| |||    
T  15829842 ctaacggaaatgaccaagatgtgtaacggatagaagttaagggaccaaaataaattgaattttaattaagggaccaaagtgatactacctaaatagctaa 15829743  T
Q  99 gggaccaaaa 108  Q
    | ||||||||    
T  15829742 gagaccaaaa 15829733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 17856480 - 17856564
Alignment:
Q  27 agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||| ||||| || ||||||||||| |||||||||||||||| ||||   |||||| ||||||||||||||||||||||||    
T  17856480 agagagaagttaagagaccaaaataaatcaaattttaattaagggaccaaaccaatactacctaaatagttaagggaccaaaaat 17856564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 1580150 - 1580225
Alignment:
Q  45 caaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataatttaa 119  Q
    ||||||||||| |||||||||||||||| ||||| |||||||  ||||||||||||| |||||||| |||||||||    
T  1580150 caaaataaatcaaattttaattaagggaccaaagcgatactatttaaatagttaaggaaccaaaaacataatttaa 1580225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 5921650 - 5921769
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| |||||| |  |||| ||||||||||||||||||| || ||||| |||||||  |||||||||||    
T  5921650 ctaacggaaatgaccaaaatgtgtaacaaagagaagttaaggaacaaaaaaaaatcgaattttaattaagagaccaaagcgatactatataaatagttaa 5921749  T
Q  99 gggaccaaaaatataattta 118  Q
    |||| |||||| | ||||||    
T  5921750 gggatcaaaaacacaattta 5921769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 15137068 - 15137187
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| |||||| ||||||| || ||||| || |||| ||| ||||||||||| |||||||||||||||| ||||  | ||||| |||||||||||     
T  15137068 ctaacggaaaggacccaaatgtgcaacagagaaaagttaaaggaccaaaataaatcaaattttaattaagggaccaaatcggtactacctaaatagttat 15137167  T
Q  99 gggaccaaaaatataattta 118  Q
    | |||||||||| |||||||    
T  15137168 gtgaccaaaaatgtaattta 15137187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 34127688 - 34127577
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | || |||||||||||| | | |||| ||||| ||  ||||||||| ||||||||||||||||| ||||  ||||||| ||||||||||||    
T  34127688 ctaacggaaatgatcaaaatgtgtaatggatagaagttaagcgacaaaaataaattgaattttaattaagggaccaaaacgatactatctaaatagttaa 34127589  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  34127588 gggaccaaaaat 34127577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 40694439 - 40694526
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac 87  Q
    |||||||| | ||||||||||||||| | |||||| |||||||| ||||||||||| |||||||||||| ||| ||||| ||||||||    
T  40694439 ctaacggaaatgaccaaaatgtgtaacggagagaaattaagggaccaaaataaatctaattttaattaaaggaccaaagcgatactac 40694526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 27914158 - 27914276
Alignment:
Q  2 taacggataggaccaaaatgtgtaaagagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaag 99  Q
    ||||||| |||||||||||||||||||||||||  |||||    ||||||||||| |||||||| ||||| | ||||  ||||||| | |||||||||||    
T  27914158 taacggaaaggaccaaaatgtgtaaagagagaaagttaagatgccaaaataaatcaaattttaactaaggaaccaaaacgatactaattaaatagttaag 27914257  T
Q  100 ggaccaaaaatataattta 118  Q
    ||| |||||||| ||||||    
T  27914258 ggatcaaaaatacaattta 27914276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 39150098 - 39150200
Alignment:
Q  10 aggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||| ||||||||||| | | |||| ||||| || |||||||||||||||||||||||||| |  |||| ||||||| |||||||||||| ||||||||    
T  39150098 aggactaaaatgtgtaacggaaagaagttaagagaccaaaataaatcgaattttaattaaggtacaaaagcgatactacctaaatagttaaaggaccaaa 39150197  T
Q  108 aat 110  Q
    |||    
T  39150198 aat 39150200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 36211605 - 36211682
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaa 77  Q
    |||||||| ||||||||||||||||| | |||||| |||||||| ||||||||||| ||||||| |||||||| ||||    
T  36211605 ctaacggaaaggaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcaaattttagttaagggaccaaa 36211682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 27132805 - 27132885
Alignment:
Q  31 agaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||| |||| ||| |||||||||||||||||||||||| ||| ||||  || |||| ||||||||||||||||||||||||    
T  27132805 agaagttaatggaccaaaataaatcgaattttaattaaaggaccaaatcgacactacctaaatagttaagggaccaaaaat 27132885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 39149966 - 39149854
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | | |||| |||||||||||||||||||||||||||| |||| |||  |||| |||||||  |||||||||||    
T  39149966 ctaacggaaatgaccaaaatgtgtaacaaatagaagttaagggatcaaaataaatcgaattttagttaaaggactaaagtgatactatttaaatagttaa 39149867  T
Q  99 gggaccaaaaata 111  Q
       ||||||||||    
T  39149866 aaaaccaaaaata 39149854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 27883721 - 27883808
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac 87  Q
    |||||||| | ||||||||||||||| | |||||| |||||  | ||||||||||| |||||||||||||||| ||||| ||||||||    
T  27883721 ctaacggaaatgaccaaaatgtgtaacggagagaagttaagtcaccaaaataaatcaaattttaattaagggaccaaagcgatactac 27883808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 32503654 - 32503543
Alignment:
Q  15 caaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatat 112  Q
    |||||||||||| |||||||| |||||| | ||||||||||||||||||| |||||| | ||||  ||||||| ||||||| ||||  || ||||||||     
T  32503654 caaaatgtgtaacagagagaagttaaggaaccaaaataaatcgaattttagttaaggaagcaaaacgatactacctaaataattaatcgatcaaaaatac 32503555  T
Q  113 aatttaatcaat 124  Q
    ||||||| ||||    
T  32503554 aatttaaccaat 32503543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 32503801 - 32503905
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | | |||| |||||||| ||||||||||| |||||||||||| ||| ||||   |||||| ||||||||||||    
T  32503801 ctaacggaaatgaccaaaatgtgtaacggaaagaagttaagggaccaaaataaatcaaattttaattaaaggaccaaatcaatactacctaaatagttaa 32503900  T
Q  99 gggac 103  Q
     ||||    
T  32503901 aggac 32503905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 119
Target Start/End: Complemental strand, 34484305 - 34484237
Alignment:
Q  52 aatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataatttaa 119  Q
    |||| |||||||||||||||| ||||| ||||||| |||||||||||| |||||||||||  |||||||    
T  34484305 aatcaaattttaattaagggaccaaagtgatactacctaaatagttaaaggaccaaaaatgcaatttaa 34484237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 11943764 - 11943855
Alignment:
Q  13 accaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaaggga 102  Q
    |||||||||||||| | |||||| |||| | | |||||||||||||||||||||||| | | ||||| ||||||| |||||||||| |||||    
T  11943764 accaaaatgtgtaacggagagaagttaatgaaccaaaataaatcgaattttaattaaagtaccaaagcgatactacctaaatagttcaggga 11943855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 36442255 - 36442136
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| |||||||||||||||||  | ||||| |||| | | ||||||||||| |||||| |||||  || ||||  ||||||| ||||||||| ||    
T  36442255 ctaacggaaaggaccaaaatgtgtaacggggagaagttaatgaaccaaaataaatcaaatttttattaatagaccaaaacgatactacctaaatagtgaa 36442156  T
Q  99 gggaccaaaaatataattta 118  Q
    |||| |||||||| ||||||    
T  36442155 gggaacaaaaatacaattta 36442136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 38073781 - 38073864
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataattta 118  Q
    ||||| ||||||||||||||||||||||||||| | |  |||  ||||||| ||||||||||||  || |||||||||||||||    
T  38073781 ttaagagatcaaaataaatcgaattttaattaaagaattaaaacgatactatctaaatagttaaatgatcaaaaatataattta 38073864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 23992203 - 23992289
Alignment:
Q  33 aatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaatataattta 118  Q
    ||||||||||| ||||||||||| ||||||| ||| |||| ||||  |||||| | ||||||||| |||||||||||| | ||||||    
T  23992203 aatttaagggaccaaaataaatcaaattttagttaggggaccaaaccgatactaattaaatagttcagggaccaaaaagacaattta 23992289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 119
Target Start/End: Complemental strand, 16350188 - 16350079
Alignment:
Q  12 gaccaaaatgtgtaaagagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| |||||||  |||||  | ||||||||||| |||||||||||||||| |||   |||||| | |||||||| ||| |||||||||    
T  16350188 gaccaaaatgtgtaaggagagaaagttaagataccaaaataaatcaaattttaattaagggaccaatacgatactaattaaatagtcaagagaccaaaaa 16350089  T
Q  110 tataatttaa 119  Q
    |  |||||||    
T  16350088 tgcaatttaa 16350079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 119
Target Start/End: Complemental strand, 27914005 - 27913896
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaagggaccaaaaa 109  Q
    ||||||||| ||||| | |||||| |||||  | ||||||||||  ||||||||| ||||||  |||| ||||||| | |||||||||||| ||||||||    
T  27914005 gaccaaaatatgtaacggagagaagttaagatagcaaaataaattaaattttaataaagggactaaagcgatactaattaaatagttaaggaaccaaaaa 27913906  T
Q  110 tataatttaa 119  Q
     |||||||||    
T  27913905 cataatttaa 27913896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 36211461 - 36211361
Alignment:
Q  12 gaccaaaatgtgtaaagag-agaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| ||  |||| |||| ||| ||||||||||| |||||||||||||||| ||||   |||| | ||||| ||||||| |||||||||    
T  36211461 gaccaaaatgtgtaacgaacagaagttaaaggaccaaaataaatcaaattttaattaagggaccaaaacaatacaacctaaacagttaagtgaccaaaaa 36211362  T
Q  110 t 110  Q
    |    
T  36211361 t 36211361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 41660012 - 41660120
Alignment:
Q  13 accaaaatgtgtaaagagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaat 110  Q
    ||||||||||||||  ||||||  |||||  | ||||||||||  ||||||||||||| || ||||| |||||| | ||||||||||| |||||||||||    
T  41660012 accaaaatgtgtaagcagagaaagttaagataccaaaataaattaaattttaattaagagaccaaagtgatactaattaaatagttaaaggaccaaaaat 41660111  T
Q  111 ataatttaa 119  Q
      |||||||    
T  41660112 gcaatttaa 41660120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 119
Target Start/End: Complemental strand, 44610926 - 44610864
Alignment:
Q  57 aattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaatataatttaa 119  Q
    |||||||||||||||| ||||| |||| ||| |||||||||||||||||||||||  |||||||    
T  44610926 aattttaattaaggga-caaagcgatattacctaaatagttaagggaccaaaaatgcaatttaa 44610864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 44916003 - 44916080
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaa 77  Q
    |||||||| ||||||||||| ||||| | |||||| |||||  | ||||||||||  |||||||||||||||| ||||    
T  44916003 ctaacggaaaggaccaaaatatgtaacggagagaagttaagataccaaaataaatgaaattttaattaagggaccaaa 44916080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 44612604 - 44612548
Alignment:
Q  10 aggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaat 65  Q
    ||||||||||||||||| | | |||| |||||||| ||||||||||| |||||||||    
T  44612604 aggaccaaaatgtgtaacggatagaagttaagggaccaaaataaatcaaattttaat 44612548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 6e-36; HSPs: 111)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 29256954 - 29256834
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    ||||| || ||||||||||||||||| |||||||| |||||||| |||||||||| ||||||||||||||||| ||||| ||||||| ||||||||||||    
T  29256954 ctaacagaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaattgaattttaattaagggaccaaagcgatactacctaaatagttaa 29256855  T
Q  99 gggaccaaaaatataatttaa 119  Q
    |||||||||||||||||||||    
T  29256854 gggaccaaaaatataatttaa 29256834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18793813 - 18793702
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||| ||||    
T  18793813 ctaacggaaaggaccaaaatgtgtaatagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaataattaa 18793714  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  18793713 gggaccaaaaat 18793702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 22584616 - 22584735
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||| ||||  ||||||| |||| |||||||    
T  22584616 ctaacggaaatgaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaaacgatactacctaattagttaa 22584715  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||||||||||    
T  22584716 gggaccaaaaatataattta 22584735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 23281274 - 23281385
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| |||||||| ||| |||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  23281274 ctaacggaaaggaccaaaatgtgtaacagagagaagttatgggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaa 23281373  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  23281374 gggaccaaaaat 23281385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 34279505 - 34279616
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  34279505 ctaacggaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaaatgatactacctaaatagttaa 34279604  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  34279605 gggaccaaaaat 34279616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 9881662 - 9881563
Alignment:
Q  12 gaccaaaatgtgtaaagagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    ||||||||||||||| ||||||| |||||||| |||||||||||||||||||||| ||||| ||||| ||||||| ||||||||||||||||||||||||    
T  9881662 gaccaaaatgtgtaacgagagaagttaagggaccaaaataaatcgaattttaatttagggaccaaagcgatactacctaaatagttaagggaccaaaaat 9881563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 10654293 - 10654404
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| |||||||| |||||||| ||||||||||||||||||| |||||||| ||||| ||||||| ||||||||||||    
T  10654293 ctaacggaaatgaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttagttaagggaccaaagcgatactacctaaatagttaa 10654392  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  10654393 gggaccaaaaat 10654404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 24590489 - 24590608
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| |||||||| ||||| || |||||||||| ||||||||||||| ||| ||||| ||||||| ||||||||||||    
T  24590489 ctaacggaaatgaccaaaatgtgtaacagagagaagttaagagaccaaaataaattgaattttaattaaaggaccaaagtgatactacctaaatagttaa 24590588  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||||||||||    
T  24590589 gggaccaaaaatataattta 24590608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 12 - 119
Target Start/End: Complemental strand, 4045210 - 4045101
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||  ||||||| ||||||||||||||| | |||||    
T  4045210 gaccaaaatgtgtaacagagagaatttaagggatcaaaataaattgaattttaattaagggaccaaaacgatactacctaaatagttaaggggctaaaaa 4045111  T
Q  110 tataatttaa 119  Q
    || |||||||    
T  4045110 tacaatttaa 4045101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 11 - 118
Target Start/End: Original strand, 50921365 - 50921474
Alignment:
Q  11 ggaccaaaatgtgtaaa-gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaa 108  Q
    ||||||||||||||||  ||||||| |||||||| ||||||||||||||||||| |||||||| ||||| ||||||| ||||||||||||||||||||||    
T  50921365 ggaccaaaatgtgtaactgagagaagttaagggaccaaaataaatcgaattttacttaagggaccaaagcgatactacctaaatagttaagggaccaaaa 50921464  T
Q  109 atataattta 118  Q
    || |||||||    
T  50921465 atgtaattta 50921474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 51692135 - 51692263
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    |||||| | ||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||| ||| ||||  |||| || |||||||||||||    
T  51692135 ctaacgaaaaggaccaaaatgtgtaacgagagaagttaagggaccaaaataaatcgaattttaattaatggaccaaaacgatattacctaaatagttaag 51692234  T
Q  100 ggaccaaaaatataatttaatcaatttat 128  Q
    |||||||||||  |||||| || ||||||    
T  51692235 ggaccaaaaatgcaatttagtctatttat 51692263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 52412873 - 52412981
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||| ||||| ||||| | |||||||||||||||||||||||    
T  52412873 gaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagtgataccacctaaatagttaagggaccaaaaa 52412972  T
Q  110 tataattta 118  Q
    | |||||||    
T  52412973 tgtaattta 52412981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 10923627 - 10923738
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    ||||| || ||||||||||||||||| || ||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||| || |||||||||||    
T  10923627 ctaacagaaaggaccaaaatgtgtaacgaagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgataccacttaaatagttaa 10923726  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  10923727 gggaccaaaaat 10923738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 22584473 - 22584362
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||| ||| | ||||||| ||||||||||||    
T  22584473 ctaacggaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaatgtgatactacctaaatagttaa 22584374  T
Q  99 gggaccaaaaat 110  Q
    | ||| ||||||    
T  22584373 gagacaaaaaat 22584362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 25088138 - 25088027
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    ||||| || ||||||||||||||||| |||||||| |||||||| ||||||||||||||||||| |||| ||| ||||| ||||||| ||||||||||||    
T  25088138 ctaaccgaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttagttaaaggaccaaagcgatactacctaaatagttaa 25088039  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  25088038 gggaccaaaaat 25088027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 34028985 - 34029096
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||| ||| | |||||| |||||||| ||||||||||||||||||| |||||||| ||||| ||||||| ||||||||||||    
T  34028985 ctaacggaaaggaccaaaatgtataacaaagagaagttaagggaccaaaataaatcgaattttagttaagggaccaaagtgatactacctaaatagttaa 34029084  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  34029085 gggaccaaaaat 34029096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 50574781 - 50574892
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    ||||| || ||||||||||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||| ||||  ||||||| ||||||||||||    
T  50574781 ctaaccgaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcaaattttaattaagggaccaaaacgatactacctaaatagttaa 50574880  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  50574881 gggaccaaaaat 50574892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 51691996 - 51691885
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| |||||||| |||| ||| ||||||| |||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  51691996 ctaacggaaatgaccaaaatgtgtaatagagagaagttaatggaccaaaatagatcgaattttaattaagggaccaaagcgatactacctaaatagttaa 51691897  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  51691896 gggaccaaaaat 51691885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 52412720 - 52412609
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||| ||| ||||||||||||||||| | |||||| |||||||| |||||||||| ||||||||||||||||| ||||| ||||||| ||||||||||||    
T  52412720 ctaatggaaaggaccaaaatgtgtaacaaagagaagttaagggaccaaaataaattgaattttaattaagggaccaaagcgatactacctaaatagttaa 52412621  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  52412620 gggaccaaaaat 52412609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 14776000 - 14776110
Alignment:
Q  2 taacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    ||||||| | ||||||||||||||| || ||||||||||| || |||||||||||||||||||||||||||||||||  ||||||| |||||||||||||    
T  14776000 taacggaaatgaccaaaatgtgtaacagggagaatttaagagaccaaaataaatcgaattttaattaagggaacaaaacgatactacctaaatagttaag 14776099  T
Q  100 ggaccaaaaat 110  Q
     ||||||||||    
T  14776100 tgaccaaaaat 14776110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 32564214 - 32564324
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    |||||||| | ||||||||||||||| || |||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||     
T  32564214 ctaacggaaatgaccaaaatgtgtaacgatagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaaa 32564313  T
Q  100 ggaccaaaaat 110  Q
    |||| ||||||    
T  32564314 ggactaaaaat 32564324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 50118455 - 50118349
Alignment:
Q  15 caaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatat 112  Q
    |||||||||||| |||||||| ||||| || |||||||||||||||| ||||||||||| ||||| ||||||| |||||||||||||||||||||||||     
T  50118455 caaaatgtgtaacagagagaaattaagagaccaaaataaatcgaattgtaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatac 50118356  T
Q  113 aatttaa 119  Q
    |||||||    
T  50118355 aatttaa 50118349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 10923473 - 10923365
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | ||| || |||||||||||||||||||| ||||||| |||||||| ||||| ||||||| ||||||| |||||||||||||||    
T  10923473 gaccaaaatgtgtaacggagaaaagttaagggatcaaaataaatcaaattttacttaagggaccaaagcgatactacctaaataattaagggaccaaaaa 10923374  T
Q  110 tataattta 118  Q
    |||||||||    
T  10923373 tataattta 10923365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 37199185 - 37199305
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| |||||||| || ||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  37199185 ctaacggaaatgaccaaaatgtgtaacggagagaagttaagggaccagaataaatcgaattttaattaagggaccaaagtgatactacctaaatagttaa 37199284  T
Q  99 gggaccaaaaatataatttaa 119  Q
    || |||||||||  |||||||    
T  37199285 ggaaccaaaaatgcaatttaa 37199305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 42607644 - 42607524
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| |||||||| |||||||| ||||||||||||||||| |||||||||| ||||  |||| || ||||||||||||    
T  42607644 ctaacggaaatgaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaatttaaattaagggaccaaaacgatattatctaaatagttaa 42607545  T
Q  99 gggaccaaaaatataatttaa 119  Q
    ||||||||||||  |||||||    
T  42607544 gggaccaaaaatgcaatttaa 42607524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 45305685 - 45305784
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| ||||||| || |||||| |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  45305685 gaccaaaatgtgtaacagagagagtt-aagggaccaaaataaatcgaattttaattaagggaccaaagtgatactacctaaatagttaagggaccaaaaa 45305783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 1831786 - 1831675
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||  || ||||| ||||||| ||||||||||||    
T  1831786 ctaacggaaaggaccaaaatgtgtaaagaagagaagttaagggaccaaaataaatcgaattttaattaaaagaccaaagtgatactacctaaatagttaa 1831687  T
Q  99 gggaccaaaaat 110  Q
    | |||| |||||    
T  1831686 gagaccgaaaat 1831675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 5463382 - 5463493
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    ||||| || ||||||||||||||||| |||||||| |||||||| ||||||||||| |||||||||||| ||| ||||| ||||||| ||||||||||||    
T  5463382 ctaacagagaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcaaattttaattaacggaccaaagcgatactagctaaatagttaa 5463481  T
Q  99 gggaccaaaaat 110  Q
    ||||| ||||||    
T  5463482 gggactaaaaat 5463493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 34028843 - 34028732
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| ||||||||||||||||| | | |||| |||||||| |||||||||| |||||||| |||||||| ||||| |||||||| |||||||||||    
T  34028843 ctaacggaaaggaccaaaatgtgtaacaaatagaagttaagggaccaaaataaattgaattttagttaagggaccaaagtgatactacctaaatagttaa 34028744  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  34028743 gggaccaaaaat 34028732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 12 - 117
Target Start/End: Original strand, 36657776 - 36657883
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| ||| |||| |||||| | |||||||||||||||||||||||||||| ||||| |||||| | ||||||||||||||||||||||    
T  36657776 gaccaaaatgtgtaatagacagaagttaaggaaccaaaataaatcgaattttaattaagggaccaaagcgatactgcataaatagttaagggaccaaaaa 36657875  T
Q  110 tataattt 117  Q
    || |||||    
T  36657876 tacaattt 36657883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 118
Target Start/End: Original strand, 6181889 - 6181999
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaa 107  Q
    ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||| |||  |||| |||||||| |||||||||| | |||||||    
T  6181889 aggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaaaggactaaagcgatactacataaatagttatgagaccaaa 6181988  T
Q  108 aatataattta 118  Q
    |||| ||||||    
T  6181989 aatacaattta 6181999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 49291258 - 49291367
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | |||||| |||||||| |||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||| |||||    
T  49291258 gaccaaaatgtgtaacatagagaaattaagggaccaaaataaatcgaattttaattaagggaccaaaacgatactatctaaatagttaagggacgaaaaa 49291357  T
Q  110 tataatttaa 119  Q
    |  |||||||    
T  49291358 tgcaatttaa 49291367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 50574636 - 50574527
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||  || ||||| ||||||| ||||||||||||    
T  50574636 ctaacggaaatgaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaatagaccaaagcgatactacctaaatagttaa 50574537  T
Q  99 gggaccaaaa 108  Q
    ||||| ||||    
T  50574536 gggacaaaaa 50574527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 11787862 - 11787738
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||| ||| | |||||| |||||||| |||||||| || |||||||||||||||| ||||| ||||||| ||||||||||||    
T  11787862 ctaacggaaaggaccaaaatgtataacggagagaagttaagggaccaaaataattcaaattttaattaagggaccaaagcgatactacctaaatagttaa 11787763  T
Q  99 gggaccaaaaatataatttaatcaa 123  Q
    |||| |||||||  |||||| ||||    
T  11787762 gggatcaaaaattcaatttagtcaa 11787738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 16267826 - 16267726
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | |||||| |||||||| ||||||||||| |||||||||||||||| ||||| |||| || |||||||||||||||||||||||    
T  16267826 gaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagcgatattacctaaatagttaagggaccaaaaa 16267727  T
Q  110 t 110  Q
    |    
T  16267726 t 16267726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 50921167 - 50921071
Alignment:
Q  16 aaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    ||||||||||| |||||||| | |||||| |||||||||||| ||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||    
T  50921167 aaaatgtgtaacagagagaaatcaagggaccaaaataaatcggattttaattaagggaccaaagtgatactacctaaatagttaagggaccaaaaat 50921071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 28970541 - 28970430
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| |||||||| || | ||| |||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||||    
T  28970541 ctaacggaaaagaccaaaatgtgtaacagagagaagttcatggaccaaaataaatcgaattttaattaaaggaccaaagcgatactacctaaatagttaa 28970442  T
Q  99 gggaccaaaaat 110  Q
     |||||||||||    
T  28970441 aggaccaaaaat 28970430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 33753347 - 33753236
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaa-gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||| |||||||||||  | ||||| |||| ||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  33753347 ctaacggaaaagacaaaaatgtgtaactgggagaagttaaaggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaa 33753248  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  33753247 gggaccaaaaat 33753236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 21036098 - 21035996
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||||||||||||||| |||||||| |||||||| |||||||||| ||||||||||||| ||| ||||| ||||||| |||||||||||||| | ||||    
T  21036098 aggaccaaaatgtgtaacagagagaagttaagggaccaaaataaattgaattttaattaatggaccaaagtgatactatctaaatagttaaggaatcaaa 21035999  T
Q  108 aat 110  Q
    |||    
T  21035998 aat 21035996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 32517715 - 32517629
Alignment:
Q  13 accaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagtta 97  Q
    |||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||    
T  32517715 accaaaatgtgtaacagagagaagttaaggaatcaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagtta 32517629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 32564080 - 32563970
Alignment:
Q  2 taacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatac-tactaaatagttaag 99  Q
    ||||||| | ||||||||||||||| ||| |||| |||||||| ||||||||||| |||||||||||||||| ||||| |||||   |||||||||||||    
T  32564080 taacggaaatgaccaaaatgtgtaacagaaagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagtgatacagcctaaatagttaag 32563981  T
Q  100 ggaccaaaaat 110  Q
    |||||||||||    
T  32563980 ggaccaaaaat 32563970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 44222300 - 44222194
Alignment:
Q  15 caaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaatat 112  Q
    |||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| ||| |||||| |||| |||||||||||      
T  44222300 caaaatgtgtaacggagagaagttaagggatcaaaataaatcgaattttaattaagggaccaaagcgatattacataaataattaaaggaccaaaaatgc 44222201  T
Q  113 aatttaa 119  Q
    |||||||    
T  44222200 aatttaa 44222194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 9119383 - 9119294
Alignment:
Q  31 agaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataatttaa 119  Q
    |||| |||||||||||||||||||| |||||||||||||||| ||||| ||||||| |||| |||||||||||  |||||||||||||||    
T  9119383 agaagttaagggatcaaaataaatcaaattttaattaagggaccaaagcgatactacctaagtagttaagggataaaaaatataatttaa 9119294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 30611315 - 30611222
Alignment:
Q  27 agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataatttaa 119  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||||||||  |||||||    
T  30611315 agagagaagttaagggactaaaataaatcgaattttaattaagggatcaaagtgataatatctaaatagttaagggaccaaaaatgcaatttaa 30611222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 33753480 - 33753589
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||| ||||||||||| | |||||| |||||||| |||||||||||||||||||||||||||| ||||  ||||||| |||||||||||     
T  33753480 ctaacggaaaagactaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaaacgatactacctaaatagttat 33753579  T
Q  99 gggaccaaaa 108  Q
    ||||||||||    
T  33753580 gggaccaaaa 33753589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 19886088 - 19885984
Alignment:
Q  17 aaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaatataa 114  Q
    |||||||||| |||||||| ||||| || |||||||||||||||||||||||||| | ||||| ||||||||  ||||||||||||||||||||||  ||    
T  19886088 aaatgtgtaacagagagaagttaagagaccaaaataaatcgaattttaattaaggaaccaaagcgatactacaaaaatagttaagggaccaaaaatgcaa 19885989  T
Q  115 tttaa 119  Q
    |||||    
T  19885988 tttaa 19885984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 25088280 - 25088399
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| ||||||||||||||||| |  ||||| |||||||| | || |||||||||||||| |||||| | ||||  |||||||| |||||||||||    
T  25088280 ctaacggaaaggaccaaaatgtgtaacatggagaagttaagggaccgaactaaatcgaattttagttaagg-accaaaacgatactacctaaatagttaa 25088378  T
Q  99 gggaccaaaaatataatttaa 119  Q
    |||||||||||||||||||||    
T  25088379 gggaccaaaaatataatttaa 25088399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 30293289 - 30293396
Alignment:
Q  13 accaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||||||||| | |||||| |||||| | |||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||||||||||||||||    
T  30293289 accaaaatgtgtaacatagagaagttaagg-accaaaataaatcgaattttaattaaaggatcaaagcgatactacctaaatagttaagggaccaaaaat 30293387  T
Q  111 ataatttaa 119  Q
      |||||||    
T  30293388 gcaatttaa 30293396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 4550864 - 4550975
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    |||||||| ||||||||||||||||| |||||||  |||||  | ||||||||||| |||||||||||||||| ||||| |||||| | |||||||||||    
T  4550864 ctaacggaaaggaccaaaatgtgtaaggagagaaagttaagataccaaaataaatcaaattttaattaagggaccaaagcgatactaattaaatagttaa 4550963  T
Q  99 gggaccaaaaat 110  Q
    | ||||||||||    
T  4550964 gagaccaaaaat 4550975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 5118079 - 5117996
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataattta 118  Q
    |||||||| |||||||||||||||||||||||| ||| ||||| |||| || ||||||||||||||||||||||||| ||||||    
T  5118079 ttaagggaccaaaataaatcgaattttaattaaaggaccaaagcgatattacctaaatagttaagggaccaaaaatacaattta 5117996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 16267966 - 16268064
Alignment:
Q  13 accaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||||||||| | |||||| |||||| | ||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||    
T  16267966 accaaaatgtgtaacggagagaagttaagg-accaaaataaatcaaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaat 16268064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19986386 - 19986497
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| ||| |||| |||| ||| ||||||||||| ||||||| ||||| || ||||| ||||||| ||||||||||||    
T  19986386 ctaacggaaatgaccaaaatgtgtaagagaaagaagttaaaggaccaaaataaatcaaattttatttaagagaccaaagtgatactacctaaatagttaa 19986485  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  19986486 gggaccaaaaat 19986497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 36077381 - 36077282
Alignment:
Q  13 accaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||| ||||| || ||||| |||||||| |||||||||| ||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||||||    
T  36077381 accaaaatttgtaacgaagagaacttaagggaccaaaataaattgaattttaattaagggaccaaagtgatactacctaaataattaagggaccaaaaat 36077282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 36884843 - 36884724
Alignment:
Q  2 taacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    ||||||| ||||||||||| ||||| | || ||| ||||| || ||||||||||||||||||||||||| || ||||| ||||||| ||||||||||||     
T  36884843 taacggaaaggaccaaaatatgtaatggagggaagttaagagaccaaaataaatcgaattttaattaagagaccaaagcgatactacctaaatagttaaa 36884744  T
Q  100 ggaccaaaaatataatttaa 119  Q
    ||| |||||||| |||||||    
T  36884743 ggaacaaaaatacaatttaa 36884724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 37199054 - 37198935
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    |||||||| | ||||||||||||||| ||| |||| |||||||| ||||||||||| |||||||||||||||| ||||| |||| |  ||||||||||||    
T  37199054 ctaacggaaaagaccaaaatgtgtaacagatagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagcgatattgcctaaatagttaa 37198955  T
Q  99 gggaccaaaaatataattta 118  Q
    |  |||||||||| ||||||    
T  37198954 gaaaccaaaaatacaattta 37198935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 46738988 - 46739106
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||| ||||||||||| |||||||| ||||| || |||| ||||||||||||||||||||||| ||||| ||||||| |||||||||||     
T  46738988 ctaacggaaatgactaaaatgtgtaacagagagaagttaagcgaccaaagtaaatcgaattttaattaagggaccaaagtgatactacctaaatagttag 46739087  T
Q  99 gggaccaaaaatataattta 118  Q
    |||| |||||||| ||||||    
T  46739088 ggga-caaaaatacaattta 46739106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 51810259 - 51810148
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | ||| || |||||||| |||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||||    
T  51810259 ctaacggaaatgaccaaaatgtgtaacggagaaaagttaagggaccaaaataaatcgaattttaattaaaggaccaaagtgatactacctaaatagttaa 51810160  T
Q  99 gggaccaaaaat 110  Q
    | ||| ||||||    
T  51810159 gagactaaaaat 51810148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 51810411 - 51810514
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||||||||||||||| |||||||| |||||||| ||||||||||| | |||||||| ||| |  |||| ||||||| |||||||||||||||||||||    
T  51810411 aggaccaaaatgtgtaacagagagaaattaagggaccaaaataaatcaatttttaattcaggaacaaaagcgatactacctaaatagttaagggaccaaa 51810510  T
Q  108 aata 111  Q
    ||||    
T  51810511 aata 51810514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 21385202 - 21385303
Alignment:
Q  3 aacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagg 100  Q
    |||||| | ||||||||||||| | | |||||| |||||||||||||||||||  |||||||||||||||| ||||| |||||||| |||||||||||||    
T  21385202 aacggaaatgaccaaaatgtgttacatagagaagttaagggatcaaaataaattaaattttaattaagggaccaaagcgatactacttaaatagttaagg 21385301  T
Q  101 ga 102  Q
    ||    
T  21385302 ga 21385303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 35986324 - 35986243
Alignment:
Q  30 gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    ||||| ||||| || |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||| |||||||    
T  35986324 gagaagttaagagaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaacaaaaat 35986243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 6181738 - 6181618
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    |||||||| | ||||||||| ||||| | |||||| |||| ||| |||||||||||||||||||||||||| | ||||| |||||| |||||||| ||||    
T  6181738 ctaacggaaatgaccaaaatatgtaatggagagaagttaaaggaccaaaataaatcgaattttaattaaggaaccaaagcgatactaactaaataattaa 6181639  T
Q  99 gggaccaaaaatataatttaa 119  Q
    |||| |||||||  |||||||    
T  6181638 gggatcaaaaatgcaatttaa 6181618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 30293135 - 30293015
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||| ||| | |||||| ||||| || ||||||||||||||||||||| ||| || ||||| ||||||| ||||||||||||    
T  30293135 ctaacggaaatgaccaaaatgtataacatagagaagttaagagaccaaaataaatcgaattttaataaagagaccaaagcgatactacctaaatagttaa 30293036  T
Q  99 gggaccaaaaatataatttaa 119  Q
     |||||||||||  |||||||    
T  30293035 tggaccaaaaatgcaatttaa 30293015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 10654151 - 10654041
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||| | ||||||||||||||||| | | |||| |||||||| |||||||||| ||||||||||||||||| ||||| | ||||| ||||||| ||||    
T  10654151 ctaacgaaaaggaccaaaatgtgtaacggacagaagttaagggaccaaaataaattgaattttaattaagggaccaaagcg-tactacctaaataattaa 10654053  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  10654052 gggaccaaaaat 10654041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 13944775 - 13944894
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||| ||||| | ||| || |||||||| |||||||||||||||| ||||||||||| ||||  ||||||| ||||||  ||||    
T  13944775 ctaacggaaatgaccaaaatttgtaacggagaaaagttaagggaccaaaataaatcgaattctaattaagggatcaaaacgatactacctaaatgattaa 13944874  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||| ||||||    
T  13944875 gggaccaaaaatacaattta 13944894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 14118652 - 14118541
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||| ||||||||||| | ||| || |||| | | |||||||||||||||||||||||||| | ||||| ||||||| ||||||||||||    
T  14118652 ctaacggaaaagactaaaatgtgtaacggagaaaagttaaagtaccaaaataaatcgaattttaattaaggaaccaaagtgatactacctaaatagttaa 14118553  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  14118552 gggaccaaaaat 14118541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 14775867 - 14775748
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||| | ||||||||||||||||| ||||| || |||||||| |||||||||||||||||||||||| | | ||||   |||||| ||||||| ||||    
T  14775867 ctaacgaaaaggaccaaaatgtgtaacagagataagttaagggagcaaaataaatcgaattttaattaaagaagcaaaacaatactacctaaataattaa 14775768  T
Q  99 gggaccaaaaatataattta 118  Q
    |||| |||||||| ||||||    
T  14775767 gggaacaaaaatacaattta 14775748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 18793986 - 18794068
Alignment:
Q  31 agaatttaagggatcaaaataaatcgaattttaattaagggaacaaa--gagatactac-taaatagttaagggaccaaaaat 110  Q
    |||| |||||||| |||||||||||||||||||||||||||| ||||  || ||||||| |||||||||||||||||||||||    
T  18793986 agaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatatactacttaaatagttaagggaccaaaaat 18794068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 27209291 - 27209172
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaa 98  Q
    |||||||| | ||||||||||||||| || || || |||||  | ||||||||||| |||||||||||||||| ||||| |||| || | ||||||||||    
T  27209291 ctaacggaaatgaccaaaatgtgtaacgaagataagttaagataccaaaataaatcaaattttaattaagggaccaaagtgatattaattaaatagttaa 27209192  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||| ||||||||    
T  27209191 gggaccaaaaacataattta 27209172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 28112807 - 28112732
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    ||||||||||||||||||| ||||||||||||||| | |||||  |||||| ||||||||||||||||||||||||    
T  28112807 ttaagggatcaaaataaattgaattttaattaaggaaccaaagcaatactacctaaatagttaagggaccaaaaat 28112732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 46949878 - 46949779
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagag-agaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| |||| |||||||||||| ||  |||| |||||||| |||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  46949878 ctaacggaaaggatcaaaatgtgtaacgaatagaagttaagggaccaaaataaatcgaattttaattaagggaccaaaacgatactacctaaatagttaa 46949779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 119
Target Start/End: Complemental strand, 13944622 - 13944513
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||| ||| | |||||| |||||||| ||| ||||||| |||||||||||||||| ||||  ||||||| |||||||||||| ||||||||||    
T  13944622 gaccaaaatgtttaatggagagaagttaagggaccaatataaatcaaattttaattaagggaccaaaacgatactagctaaatagttaaaggaccaaaaa 13944523  T
Q  110 tataatttaa 119  Q
    |  |||||||    
T  13944522 tgcaatttaa 13944513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 19886214 - 19886303
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataatttaatcaat 124  Q
    |||| ||| |||||||||||||||||||||||| ||| ||||| ||||||| ||||||| |||| |||||||||||| ||||||| ||||    
T  19886214 ttaaaggaccaaaataaatcgaattttaattaaaggaccaaagtgatactacctaaataattaaaggaccaaaaatacaatttaaccaat 19886303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 28112872 - 28112795
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaa 77  Q
    |||||||| | || |||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||| ||||    
T  28112872 ctaacggaaatgatcaaaatgtgtaatagagagaagttaagggaccaaaataaatcgaattttaattaagggatcaaa 28112795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 32517777 - 32517895
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaa-gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | |||||||||||||||| ||||||| || ||||||||||||||||| ||||||||||||   | ||||| ||||||| |||||||| |||    
T  32517777 ctaacggaaatgaccaaaatgtgtaaatgagagaagttgagggatcaaaataaatcaaattttaattaa--aaccaaagtgatactacctaaatagataa 32517874  T
Q  99 gggaccaaaaatataatttaa 119  Q
    |||| |||||||  |||||||    
T  32517875 gggatcaaaaatgcaatttaa 32517895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 34621910 - 34622019
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | | |||| |||||  | ||||||||||| |||||||||||||||| ||||  ||||||| | |||||||||||||||||||||    
T  34621910 gaccaaaatgtgtaacggaaagaagttaagataccaaaataaatcaaattttaattaagggatcaaaacgatactaattaaatagttaagggaccaaaaa 34622009  T
Q  110 tataatttaa 119  Q
     |||||||||    
T  34622010 cataatttaa 34622019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 4045363 - 4045471
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||| ||| ||||| ||||||||||  ||||| || |||| |||  |||||||||||||||||||||||| || ||||| |||||||| |||||||||||    
T  4045363 ctaatggaaaggactaaaatgtgtagcagagaaaagttaaaggactaaaataaatcgaattttaattaagagaccaaagtgatactacttaaatagttaa 4045462  T
Q  99 gggaccaaa 107  Q
    |||||||||    
T  4045463 gggaccaaa 4045471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 11394952 - 11395048
Alignment:
Q  28 gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataatttaatcaa 123  Q
    ||||||| |||||||| ||||||||||| |||||||||||||||| ||||   | |||| ||||||||||||||||||||||||  |||||| ||||    
T  11394952 gagagaagttaagggaccaaaataaatcaaattttaattaagggatcaaaacaaaactacctaaatagttaagggaccaaaaatgcaatttagtcaa 11395048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 24655708 - 24655600
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    ||||| || ||| ||||||||||||| | |||||| ||||| || |||||| |||||||||||||||||| || ||||| ||||||| ||||||| ||||    
T  24655708 ctaacagaaaggcccaaaatgtgtaacaaagagaagttaagagaccaaaatgaatcgaattttaattaagagaccaaagcgatactacctaaatacttaa 24655609  T
Q  99 gggaccaaa 107  Q
    |||||||||    
T  24655608 gggaccaaa 24655600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 30792551 - 30792451
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| ||||| ||  ||||||| ||||||||||||||||||| |||||||| ||||| || | || ||||||||||| |||||||||||    
T  30792551 gaccaaaatgtgtaacagagaaaagataagggaccaaaataaatcgaattttatttaagggatcaaagcgacagtacctaaatagttaggggaccaaaaa 30792452  T
Q  110 t 110  Q
    |    
T  30792451 t 30792451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 40703129 - 40703240
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    |||||| | ||||||||||||||||| |||||||  |||||    ||||||||||| |||||||| ||||||| ||||| |||||| | |||||||||||    
T  40703129 ctaacgaaaaggaccaaaatgtgtaaggagagaaagttaagatgccaaaataaatcaaattttaactaagggaccaaagcgatactaattaaatagttaa 40703228  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  40703229 gggaccaaaaat 40703240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 42607766 - 42607885
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||| ||||| |||||| | |||| ||| | ||||||||| ||||||||||||| || ||||  ||||||| ||||||| ||||    
T  42607766 ctaacggaaaggaccaaaatttgtaacagagagtaattaaaggaccgaaataaatcaaattttaattaagagaccaaaacgatactatctaaataattaa 42607865  T
Q  99 gggaccaaaaatataattta 118  Q
    |||| |||||||| ||||||    
T  42607866 gggatcaaaaatacaattta 42607885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 5118162 - 5118096
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaa 77  Q
    ||||||||||| ||| |||||||| |||||||| |||||||||||||||||||||||||||| ||||    
T  5118162 gaccaaaatgtataacagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaa 5118096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 24590303 - 24590237
Alignment:
Q  45 caaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaat 110  Q
    |||||||||||||||||||||||||||| ||||| |||||||| |||||||||||| ||| ||||||    
T  24590303 caaaataaatcgaattttaattaagggaccaaagcgatactacttaaatagttaagtgactaaaaat 24590237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 24655859 - 24655961
Alignment:
Q  10 aggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaa 107  Q
    ||||||||||||||||| | | |||| |||| || |||||||||||||||||||||||| | || ||||| |||||||| |||||||||||| ||| |||    
T  24655859 aggaccaaaatgtgtaacggatagaagttaatggctcaaaataaatcgaattttaattacgagaccaaagcgatactacttaaatagttaagagactaaa 24655958  T
Q  108 aat 110  Q
    |||    
T  24655959 aat 24655961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 110
Target Start/End: Original strand, 11788018 - 11788115
Alignment:
Q  15 caaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaat 110  Q
    |||||||||||| | ||| || |||||||| |||||||||||||||||||||||||||| ||||| |||||| | |||||| ||||  ||||||||||    
T  11788018 caaaatgtgtaatggagataagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactgcttaaataattaaaagaccaaaaat 11788115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 11797297 - 11797220
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaa 77  Q
    |||||||| ||||||||||||| ||| | |||||  |||||||| |||||||||||||||||||||||||||| ||||    
T  11797297 ctaacggaaaggaccaaaatgtataacggagagaggttaagggaccaaaataaatcgaattttaattaagggaccaaa 11797220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 13831297 - 13831358
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaaggga 72  Q
    ||||||||||||||| | |||||| |||||||| ||||||||||||||||||||||||||||    
T  13831297 gaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttaattaaggga 13831358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 30611531 - 30611604
Alignment:
Q  46 aaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataattta 118  Q
    ||||||||||||||||||||| ||||| ||||| ||||| | |||||||||||||||| |||||||| ||||||    
T  30611531 aaaataaatcgaattttaatttagggaccaaagcgatacaacctaaatagttaagggatcaaaaatacaattta 30611604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 34279331 - 34279251
Alignment:
Q  31 agaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||| ||||| || |||||||||| ||||||||||||||||| ||||| | ||||| ||||||||||||| ||||||||||    
T  34279331 agaagttaagagaccaaaataaattgaattttaattaagggaccaaagcgttactacctaaatagttaagagaccaaaaat 34279251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 36657595 - 36657511
Alignment:
Q  27 agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatac-tactaaatagttaagggaccaaaaat 110  Q
    |||||| | |||||||||||||||||||| |||||||||||||||| | ||||||| |  |||||||||||| ||||| ||||||    
T  36657595 agagaggagttaagggatcaaaataaatcaaattttaattaagggacccaagagatgcaaactaaatagttaggggacgaaaaat 36657511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 11797232 - 11797157
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||| |||||||||| |||||||||||||||||  |||| ||||||| ||||||| |||| |||||||||||    
T  11797232 ttaagggaccaaaataaattgaattttaattaagggacaaaagcgatactacctaaataattaaaggaccaaaaat 11797157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 29257087 - 29257198
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| |||| ||| |||||||||| |||||||||||| ||||  |||   |||||| ||||||||||||    
T  29257087 ctaacggaaatgaccaaaatgtgtaacggagagaagttaatggaccaaaataaattgaattttaattaggggacaaaattaatactagctaaatagttaa 29257186  T
Q  99 gggaccaaaaat 110  Q
    | ||||||||||    
T  29257187 gagaccaaaaat 29257198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 49291115 - 49291016
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||| ||||||||||| || ||||| |||||| |  |||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  49291115 ctaacggaaatgacgaaaatgtgtaatgaagagaagttaaggaacaaaaataaatcaaattttaattaagggaccaaagcgatactacctaaatagttaa 49291016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 1831974 - 1832048
Alignment:
Q  46 aaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaatataatttaa 119  Q
    ||||||||||||||||||||||| |||  |||  |||||||| || ||||||||||||||||||||| |||||||    
T  1831974 aaaataaatcgaattttaattaaaggactaaaacgatactacatatatagttaagggaccaaaaatacaatttaa 1832048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 5463236 - 5463130
Alignment:
Q  4 acggataggaccaaaatgtgtaaa-gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaaggg 101  Q
    ||||| ||||||||||| ||||   ||||||| |||||||| ||||||||||||||||||||||||| || ||||| |||| || ||||||| |||| |     
T  5463236 acggaaaggaccaaaatatgtacctgagagaagttaagggaccaaaataaatcgaattttaattaagagaccaaagcgatattatctaaataattaaaga 5463137  T
Q  102 accaaaa 108  Q
    |||||||    
T  5463136 accaaaa 5463130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 46950000 - 46950085
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaa-gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact 85  Q
    |||||||| | |||||||||||||||  ||||||| ||||| || |||||||||||||||||||||||| ||| ||| | ||||||    
T  46950000 ctaacggaaatgaccaaaatgtgtaactgagagaagttaagagaccaaaataaatcgaattttaattaaaggagcaatgtgatact 46950085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 11394773 - 11394705
Alignment:
Q  41 ggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaa 108  Q
    ||||||||| |||||||||||||||||||||| ||||| |||| || ||||||||||||| ||| ||||    
T  11394773 ggatcaaaagaaatcgaattttaattaagggaccaaagcgatattacctaaatagttaagagacaaaaa 11394705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 31126050 - 31125947
Alignment:
Q  2 taacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    ||||||| | || |||||||||||| | |||||| |||||| |||||||||||||||||||||||||       |||| ||||||| |||||||||||||    
T  31126050 taacggaaatgatcaaaatgtgtaatggagagaagttaaggaatcaaaataaatcgaattttaatta-------aaagcgatactacctaaatagttaag 31125958  T
Q  100 ggaccaaaaat 110  Q
    ||| |||||||    
T  31125957 ggatcaaaaat 31125947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 40534047 - 40533927
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | ||| || |||||  | | ||||||||| |||||||||||||||| ||||| |||||| | |||||||||||    
T  40534047 ctaacggaaatgaccaaaatgtgtaatggagaaaagttaagatagcgaaataaatcaaattttaattaagggatcaaagcgatactaattaaatagttaa 40533948  T
Q  99 gggaccaaaaatataatttaa 119  Q
    | ||| ||||||  |||||||    
T  40533947 gagactaaaaatgcaatttaa 40533927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 21385058 - 21384960
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| | ||||||||| ||||| | |||||| |||| | | ||||||||||||||||||||||||||||  |||| |||||||| |||||||||||    
T  21385058 ctaacggaaatgaccaaaatatgtaatggagagaagttaaag-accaaaataaatcgaattttaattaagggataaaagcgatactacataaatagttaa 21384960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9119556 - 9119618
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaatttt 62  Q
    ||||| || ||||||||||||||||| | |||||| |||||||| ||||||||||||||||||    
T  9119556 ctaactgaaaggaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcgaatttt 9119618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 27209414 - 27209524
Alignment:
Q  2 taacggataggaccaaaatgtgtaaagagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaag 99  Q
    ||||||| |||||||||||||| || |||||||  |||||  | ||||||||||| |||||||||||| ||| ||||  |||||| | ||||| || |||    
T  27209414 taacggaaaggaccaaaatgtgcaaggagagaaagttaagataccaaaataaatcaaattttaattaaaggaccaaaacgatactaattaaattgtcaag 27209513  T
Q  100 ggaccaaaaat 110  Q
    |||||||||||    
T  27209514 ggaccaaaaat 27209524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 40534236 - 40534306
Alignment:
Q  47 aaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaatataatt 116  Q
    ||||||||| ||||||||||||| || ||||| |||||| | ||||||||||||||| |||||| ||||||    
T  40534236 aaataaatcaaattttaattaagagaccaaagcgatactaattaaatagttaagggatcaaaaacataatt 40534306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 5118108 - 5118067
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaa 77  Q
    |||||||| |||||||||||||||||||||||||||| ||||    
T  5118108 ttaagggaccaaaataaatcgaattttaattaagggaccaaa 5118067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 20260505 - 20260440
Alignment:
Q  45 caaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaa 109  Q
    ||||||||||| |||||||||||||||| ||||  |||||| | |||||||||||| |||||||||    
T  20260505 caaaataaatcaaattttaattaagggaccaaaatgatactaattaaatagttaagagaccaaaaa 20260440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 3569487 - 3569379
Alignment:
Q  13 accaaaatgtgtaa-agagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaagggaccaaaaa 109  Q
    |||||||||||||| ||||||||  |||||  | ||||||| ||| |||||||||||||| | ||||  ||||||| | ||||| |||||||||||||||    
T  3569487 accaaaatgtgtaacagagagaaaattaagataccaaaatatatcaaattttaattaaggaaccaaaacgatactaattaaataattaagggaccaaaaa 3569388  T
Q  110 tataattta 118  Q
     ||||||||    
T  3569387 cataattta 3569379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 19886151 - 19886226
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaa 77  Q
    |||||||| | ||| ||||||||| | ||||||| |||| ||| |||||||||||||||||||||||| ||| ||||    
T  19886151 ctaacggaaatgacaaaaatgtgtga-gagagaagttaaaggaccaaaataaatcgaattttaattaaaggaccaaa 19886226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 36884969 - 36885037
Alignment:
Q  2 taacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaag 69  Q
    ||||||| | ||| ||||||||||| ||||| || |||||| | |||||||||||||||||||||||||    
T  36884969 taacggaaatgacaaaaatgtgtaacagagataagttaaggaaccaaaataaatcgaattttaattaag 36885037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 45305495 - 45305420
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||| ||| ||||||||||||||| |||||||| ||| |||||  |||||| ||||||||||||  ||||||||||    
T  45305495 ttaaaggaccaaaataaatcgaatcttaattaaaggaccaaagcaatactacctaaatagttaactgaccaaaaat 45305420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 19269437 - 19269371
Alignment:
Q  45 caaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaat 110  Q
    ||||||||| |||||||||| |||| || ||||| ||||||   |||||||||||||||||||||||    
T  19269437 caaaataaaccgaattttaactaagagaccaaagtgatactggataaatagttaagggaccaaaaat 19269371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 20260654 - 20260754
Alignment:
Q  12 gaccaaaatgtgtaaagagaga-atttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaa 109  Q
    ||||||||| ||||| |||||| | |||||  | |||||||||||  ||||||||||||||| ||||  |||||| | |||||| ||||||||| |||||    
T  20260654 gaccaaaatatgtaaggagagagagttaagataccaaaataaatcagattttaattaagggaccaaaacgatactaattaaataattaagggactaaaaa 20260753  T
Q  110 t 110  Q
    |    
T  20260754 t 20260754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 76)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 118
Target Start/End: Original strand, 1826064 - 1826174
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  1826064 aggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaa 1826163  T
Q  108 aatataattta 118  Q
    |||| ||||||    
T  1826164 aatacaattta 1826174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 118
Target Start/End: Original strand, 1860509 - 1860619
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  1860509 aggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaa 1860608  T
Q  108 aatataattta 118  Q
    |||| ||||||    
T  1860609 aatacaattta 1860619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 31230877 - 31230996
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| | |||||| ||||||||||||||||||| ||||||||||||||||| |||||  |||||| ||||||||||||    
T  31230877 ctaacggaaaggaccaaaatgtgtaacaaagagaagttaagggatcaaaataaattgaattttaattaagggaccaaagcaatactacctaaatagttaa 31230976  T
Q  99 gggaccaaaaatataattta 118  Q
    |||||||||||| |||||||    
T  31230977 gggaccaaaaatgtaattta 31230996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 23244779 - 23244890
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||| ||||| | |||||| ||||||||||||||||||||||||||||| ||||||| ||||| ||||||| ||||||||||||    
T  23244779 ctaacggaaaggaccaaaatatgtaacatagagaagttaagggatcaaaataaatcgaattttaactaagggaccaaagcgatactatctaaatagttaa 23244878  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  23244879 gggaccaaaaat 23244890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 31230735 - 31230624
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| | |||||| |||||||| ||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  31230735 ctaacggaaaggaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagtgatactacctaaatagttaa 31230636  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  31230635 gggaccaaaaat 31230624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 12 - 119
Target Start/End: Complemental strand, 758455 - 758346
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||| ||||| ||||||| ||||||||||||||| |||||||    
T  758455 gaccaaaatgtgtaacagagagaatttaagggatcaaaataaatttaattttaattaagggaccaaagcgatactacctaaatagttaaggggccaaaaa 758356  T
Q  110 tataatttaa 119  Q
    |  |||||||    
T  758355 tgcaatttaa 758346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 37393599 - 37393470
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaa-gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||| |||||  ||||||| |||||||| |||||||||| ||||||||||||||||| ||||  ||||||| ||||||||||||    
T  37393599 ctaacggaaaggaccaaaatatgtaattgagagaagttaagggaccaaaataaattgaattttaattaagggaccaaaacgatactacctaaatagttaa 37393500  T
Q  99 gggaccaaaaatataatttaatcaatttat 128  Q
    ||||||||||||| ||||||| | ||||||    
T  37393499 gggaccaaaaatacaatttaacctatttat 37393470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 14920686 - 14920786
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||| ||||| |||||||| ||||||||||||||||||||||    
T  14920686 gaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagcgatactacttaaatagttaagggaccaaaaa 14920785  T
Q  110 t 110  Q
    |    
T  14920786 t 14920786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 37393752 - 37393852
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | |||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  37393752 gaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttaattaagggatcaaagcgatactacctaaatagttaagggaccaaaaa 37393851  T
Q  110 t 110  Q
    |    
T  37393852 t 37393852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 39912183 - 39912303
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||| ||||||||||| | |||||| |||||||| ||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  39912183 ctaacggaaatgactaaaatgtgtaatggagagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagtgatactacctaaatagttaa 39912282  T
Q  99 gggaccaaaaatataatttaa 119  Q
    |||||||||||| ||||||||    
T  39912283 gggaccaaaaatgtaatttaa 39912303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 11198469 - 11198580
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    |||| ||| ||||||||||||||||| | |||||| |||||||||||||||||||| |||||||||||||||| ||||| ||||||  ||||||||||||    
T  11198469 ctaatggaaaggaccaaaatgtgtaacggagagaagttaagggatcaaaataaatcaaattttaattaagggaccaaagcgatactgtctaaatagttaa 11198568  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  11198569 gggaccaaaaat 11198580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 24456916 - 24457027
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| |||||||| |||||||||||||||||||||||||||| ||| | ||||||| ||||||||||||    
T  24456916 ctaacggaaatgaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaggcgatactacctaaatagttaa 24457015  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  24457016 gggaccaaaaat 24457027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 29027244 - 29027351
Alignment:
Q  13 accaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||||||||| | |||||| |||||||| |||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||| ||||||||||    
T  29027244 accaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaaacgatactacctaaatagttaagagaccaaaaat 29027343  T
Q  111 ataattta 118  Q
    ||||||||    
T  29027344 ataattta 29027351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 39240152 - 39240041
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| || ||||| |||||| |||||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  39240152 ctaacggaaatgaccaaaatgtgtaacgaagagaagttaaggaatcaaaataaatcgaattttaattaagggaccaaaatgatactacctaaatagttaa 39240053  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  39240052 gggaccaaaaat 39240041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 40040284 - 40040173
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||| ||||||||||||| | |||||| |||||||| |||||||||||||||||||||||||| | ||||| ||||||| ||||||||||||    
T  40040284 ctaacggaaagggccaaaatgtgtaacggagagaagttaagggaacaaaataaatcgaattttaattaaggtaccaaagcgatactacctaaatagttaa 40040185  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  40040184 gggaccaaaaat 40040173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 3869213 - 3869332
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| |||||||||| |||||| | |||||| ||||||||  |||| |||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  3869213 ctaacggaaaggaccaaaaagtgtaacggagagaagttaagggacaaaaaaaaatcgaattttaattaagggaccaaaacgatactacctaaatagttaa 3869312  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||| ||||||    
T  3869313 gggaccaaaaatacaattta 3869332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18018050 - 18018161
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatac-tactaaatagttaa 98  Q
    |||||||| ||||||||||||||||| | |||||| |||||||| |||||||||| ||||||||||||||||| |||||  |||| | ||||||||||||    
T  18018050 ctaacggaaaggaccaaaatgtgtaacggagagaagttaagggaccaaaataaattgaattttaattaagggagcaaagcaatacttcctaaatagttaa 18018149  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  18018150 gggaccaaaaat 18018161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 35224031 - 35224142
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| |||||||| ||||||||||||||||||| |||||||| ||||  |||||| |||||||||||||    
T  35224031 ctaacggaaatgaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcgaattttagttaagggaccaaaacgatactaactaaatagttaa 35224130  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  35224131 gggaccaaaaat 35224142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 7041742 - 7041653
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagtta 97  Q
    ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||    
T  7041742 aggaccaaaatgtgtaatagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagtta 7041653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 18017912 - 18017804
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| |||||||| |||| ||| |||||||||| |||||||||||||| || |||||  |||||| ||||||||||||    
T  18017912 ctaacggaaaggaccaaaatgtgtaacagagagaagttaaaggaccaaaataaattgaattttaattaagtgaccaaagcaatactacctaaatagttaa 18017813  T
Q  99 gggaccaaa 107  Q
    |||||||||    
T  18017812 gggaccaaa 18017804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 30872894 - 30872794
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||| | | |||||| |||||||| |||||||||||||||||||||||||||| |||||  |||||| |||||||||||||||||||||||    
T  30872894 gaccaaaatgtgttacaaagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcaatactacctaaatagttaagggaccaaaaa 30872795  T
Q  110 t 110  Q
    |    
T  30872794 t 30872794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 119238 - 119128
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| |||||||| |||||| | ||||||||||||||||||||| |||||| |||||  |||||| ||||||||||||    
T  119238 ctaacggaaatgaccaaaatgtgtaacagagagaagttaagg-accaaaataaatcgaattttaatcaagggaccaaagtaatactacctaaatagttaa 119140  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  119139 gggaccaaaaat 119128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 21515464 - 21515583
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| | ||||||||| ||||| | |||||| |||||||| |||||||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  21515464 ctaacggaaatgaccaaaatatgtaacaaagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacgtaaatagttaa 21515563  T
Q  99 gggaccaaaaatataattta 118  Q
      ||| |||||| |||||||    
T  21515564 aagactaaaaatgtaattta 21515583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 26736247 - 26736120
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| ||||||||||||||||| ||||||||  ||||||| ||||||||||  ||||||||  |||||| ||||| |||||||| |||||||||||    
T  26736247 ctaacggaaaggaccaaaatgtgtaacagagagaaggtaagggaccaaaataaattaaattttaaaaaagggaccaaagcgatactacctaaatagttaa 26736148  T
Q  99 gggaccaaaaatataatttaatcaattt 126  Q
    | ||||||||||  ||||||| ||||||    
T  26736147 gagaccaaaaatgcaatttaaccaattt 26736120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 40094597 - 40094487
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| |||||| | |||||||||| ||||||||||||||||| ||||| ||||||| ||||||||||||    
T  40094597 ctaacggaaatgaccaaaatgtgtaacggagagaagttaaggaaccaaaataaattgaattttaattaagggaccaaagcgatactacctaaatagttaa 40094498  T
Q  99 gggaccaaaaa 109  Q
    ||||| |||||    
T  40094497 gggacaaaaaa 40094487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 18622011 - 18622120
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | || |||||||||||| ||| |||| |||||||| |||||||||| ||||||||||||||||| ||||| ||||||| ||||||||||||    
T  18622011 ctaacggaaaagagcaaaatgtgtaacagatagaagttaagggaccaaaataaattgaattttaattaagggaccaaagcgatactatctaaatagttaa 18622110  T
Q  99 gggaccaaaa 108  Q
    | ||||||||    
T  18622111 gagaccaaaa 18622120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 35223894 - 35223785
Alignment:
Q  3 aacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagg 100  Q
    |||||| | ||||||||||||||| | |||||| |||||||| ||||||||||||||||||| | |||||| ||||| ||||||| ||||||||| ||||    
T  35223894 aacggaaatgaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcgaattttagtcaagggaccaaagcgatactacctaaatagtaaagg 35223795  T
Q  101 gaccaaaaat 110  Q
    ||||||||||    
T  35223794 gaccaaaaat 35223785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 119
Target Start/End: Complemental strand, 6843608 - 6843497
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaattta--agggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||||||||||||| |||||||| |||  ||||| ||||||||||| |||||||||||||||| || || ||||||| |||||||||||||||||||||    
T  6843608 gaccaaaatgtgtaacagagagaagttataagggaccaaaataaatcaaattttaattaagggatcatagtgatactacctaaatagttaagggaccaaa 6843509  T
Q  108 aatataatttaa 119  Q
    |||  |||||||    
T  6843508 aatgcaatttaa 6843497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 5417077 - 5417188
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagaga-gaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | |||||||||||| || |||| ||| |||||| | ||||||||||| ||||||| |||||||| ||||| ||||||| ||||||||||||    
T  5417077 ctaacggaaatgaccaaaatgtgcaacgagaagaagttaaggaaccaaaataaatcaaattttagttaagggaccaaagcgatactacctaaatagttaa 5417176  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  5417177 gggaccaaaaat 5417188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18914515 - 18914626
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||| |||  | || ||| ||| |||||||||||     
T  18914515 ctaacggaaaagaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaaaggacaagagcgatgctacctaaatagttag 18914614  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  18914615 gggaccaaaaat 18914626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 30568540 - 30568659
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | || |||||||||||| | ||| || |||||||| ||||||||||| |||||||| ||||||| ||||  ||||||| ||||||||||||    
T  30568540 ctaacggaaatgatcaaaatgtgtaacggagaaaaattaagggaccaaaataaatcaaattttaaataagggaccaaatcgatactaactaaatagttaa 30568639  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||| ||||||    
T  30568640 gggaccaaaaatacaattta 30568659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 30650312 - 30650201
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| | |||||| |||||| | ||||||||||| |||||||||||||||| ||||| ||||||| |||||||||||     
T  30650312 ctaacggaaaggaccaaaatgtgtaacggagagaagttaaggaaccaaaataaatcaaattttaattaagggaccaaagtgatactacctaaatagttag 30650213  T
Q  99 gggaccaaaaat 110  Q
     |||| ||||||    
T  30650212 aggactaaaaat 30650201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 24456811 - 24456745
Alignment:
Q  45 caaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||    
T  24456811 caaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaat 24456745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 10 - 118
Target Start/End: Complemental strand, 21512525 - 21512416
Alignment:
Q  10 aggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactactaaatagttaagggaccaaaa 108  Q
    ||||||||||||||||  | |||||| |||||||  ||||||||||| |||||||||||| |||  |||| |||||| ||||||||||||||||| ||||    
T  21512525 aggaccaaaatgtgtagcggagagaagttaaggggccaaaataaatcaaattttaattaatggactaaagcgatactcctaaatagttaagggacgaaaa 21512426  T
Q  109 atataattta 118  Q
    ||| ||||||    
T  21512425 atacaattta 21512416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 40032693 - 40032802
Alignment:
Q  2 taacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaag 99  Q
    ||||||| | || |||||||||||| |||||||| ||||| || |||||||||||||||||||||||||||| ||||  |||||||| ||||||| ||||    
T  40032693 taacggaaatgatcaaaatgtgtaacagagagaagttaagagaccaaaataaatcgaattttaattaagggatcaaaatgatactacataaatagctaag 40032792  T
Q  100 ggaccaaaaa 109  Q
    |||| |||||    
T  40032793 ggacaaaaaa 40032802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 8654200 - 8654320
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| || |||||||||||||| | |||||| |||||||| ||||||||||| |||||||||||| ||| ||||   ||| || ||||||||||||    
T  8654200 ctaacggaaagtaccaaaatgtgtaacggagagaagttaagggagcaaaataaatcaaattttaattaaaggaccaaaacaatattacctaaatagttaa 8654299  T
Q  99 gggaccaaaaatataatttaa 119  Q
    ||||||||||||  |||||||    
T  8654300 gggaccaaaaatgcaatttaa 8654320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 11639163 - 11639055
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | |||||| ||||| ||  ||||||||||||||||||||||||||| ||||| ||  ||| ||||||||||||||||| |||||    
T  11639163 gaccaaaatgtgtaacggagagaagttaagagacgaaaataaatcgaattttaattaagggaccaaagcgacgctacctaaatagttaagggacaaaaaa 11639064  T
Q  110 tataattta 118  Q
    || ||||||    
T  11639063 tacaattta 11639055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 23244637 - 23244517
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| | ||||||||||||||| |||||||| |||||||| ||||||||||| |||||||||||| | | ||||| |||||||| ||||| ||||     
T  23244637 ctaacggaaacgaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcaaattttaattaaagaaccaaagcgatactacataaatggttag 23244538  T
Q  99 gggaccaaaaatataatttaa 119  Q
     |||||||||||  |||||||    
T  23244537 tggaccaaaaatgcaatttaa 23244517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 40032549 - 40032437
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaa-ttaagggaacaaagagatacta-ctaaatagtta 97  Q
    ||||| || ||||||||||||||||| ||| |||| |||||||| |||||||||||||||||||| ||||| || ||||| ||||||| ||||||| |||    
T  40032549 ctaacagaaaggaccaaaatgtgtaacagacagaagttaagggaccaaaataaatcgaattttaatttaagagaccaaagcgatactacctaaataatta 40032450  T
Q  98 agggaccaaaaat 110  Q
    || ||||||||||    
T  40032449 agtgaccaaaaat 40032437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 44254972 - 44254876
Alignment:
Q  16 aaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaat 110  Q
    ||||||||||| ||| |||| |||||||| ||||||||||| |||||||||||||||| ||||| |||||||| |||||||||||||  ||||||||    
T  44254972 aaaatgtgtaacagaaagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagcgatactacttaaatagttaaggatccaaaaat 44254876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 8654022 - 8653939
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataattta 118  Q
    |||||||| |||||||||| ||||||||||||||||| ||||  ||||||| ||||||||||| ||||||||||||| ||||||    
T  8654022 ttaagggaccaaaataaattgaattttaattaagggaccaaaacgatactacctaaatagttaggggaccaaaaatacaattta 8653939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 9495287 - 9495398
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| | |||||||||| |||| | |||||| |||||||| ||||||||||| || ||||||||| ||| |||||  ||||||| |||||||||||    
T  9495287 ctaacggaaatgaccaaaatgagtaacggagagaagttaagggaccaaaataaatcaaactttaattaacggaccaaagcaatactacttaaatagttaa 9495386  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  9495387 gggaccaaaaat 9495398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 16645840 - 16645923
Alignment:
Q  28 gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    ||||||| |||| ||| |||||||||||||||||||||||||||| ||||   |||||| ||||||||||||||||||||||||    
T  16645840 gagagaagttaaaggaccaaaataaatcgaattttaattaagggaccaaaacaatactacctaaatagttaagggaccaaaaat 16645923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 758635 - 758716
Alignment:
Q  27 agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaa 107  Q
    ||||| || |||||||| |||||||||||||||||||||| | ||| ||||| |||||||| ||||||||||||||||||||    
T  758635 agagaaaagttaagggaccaaaataaatcgaattttaatttaaggaccaaagtgatactacttaaatagttaagggaccaaa 758716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 3869038 - 3868957
Alignment:
Q  28 gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaa 108  Q
    ||||||| ||||| ||  ||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||| |||||    
T  3869038 gagagaagttaagagactaaaataaatcgaattttaattaagggaccaaagtgatactacataaatagttaagggatcaaaa 3868957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 6844715 - 6844815
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | |||||| |||||||| ||| ||||||||| ||||||||||| || ||||| ||| ||| ||||||||||||| |||||||||    
T  6844715 gaccaaaatgtgtaatggagagaagttaagggaccaagataaatcgatttttaattaagagatcaaagcgatgctacctaaatagttaagagaccaaaaa 6844814  T
Q  110 t 110  Q
    |    
T  6844815 t 6844815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 39240283 - 39240403
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| |||||||||||||||||  || |||| ||||| || ||||||||||  ||||||||||||| || ||||  ||||||| ||||||| ||||    
T  39240283 ctaacggaaaggaccaaaatgtgtaacggaaagaagttaagagaccaaaataaattaaattttaattaagagaccaaaacgatactacctaaataattaa 39240382  T
Q  99 gggaccaaaaatataatttaa 119  Q
    ||||||||||||  |||||||    
T  39240383 gggaccaaaaatgcaatttaa 39240403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 1825931 - 1825813
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaa 98  Q
    |||||||| | ||||||||||||||| |||||||| ||||||||  ||||||| || ||||||||||||| || ||||  ||| || || ||||||||||    
T  1825931 ctaacggaaatgaccaaaatgtgtaacagagagaagttaagggactaaaataa-tcaaattttaattaagagatcaaaacgatgctccttaaatagttaa 1825833  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||| ||||||    
T  1825832 gggaccaaaaatacaattta 1825813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 1860376 - 1860258
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaa 98  Q
    |||||||| | ||||||||||||||| |||||||| ||||||||  ||||||| || ||||||||||||| || ||||  ||| || || ||||||||||    
T  1860376 ctaacggaaatgaccaaaatgtgtaacagagagaagttaagggactaaaataa-tcaaattttaattaagagatcaaaacgatgctccttaaatagttaa 1860278  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||| ||||||    
T  1860277 gggaccaaaaatacaattta 1860258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 5416934 - 5416815
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    ||||| || ||||||||||||||||| ||| |||| ||||  || |||||| ||||||||||||||||  ||| ||||  |||||||| ||||||||||     
T  5416934 ctaacagaaaggaccaaaatgtgtaacagaaagaagttaaaagaccaaaatcaatcgaattttaattagaggaccaaaacgatactacctaaatagttag 5416835  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||| ||||||    
T  5416834 gggaccaaaaatacaattta 5416815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 12873323 - 12873429
Alignment:
Q  12 gaccaaaatgtgtaaagagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaagggaccaaaaat 110  Q
    ||||||||||||||| |||||| || |||  | |||||||||||  ||||||||||||||| ||||  ||||||| | ||||||||||||||||||||||    
T  12873323 gaccaaaatgtgtaaggagagagtt-aagataccaaaataaatcagattttaattaagggaccaaaacgatactaattaaatagttaagggaccaaaaat 12873421  T
Q  111 ataattta 118  Q
    | ||||||    
T  12873422 acaattta 12873429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 39912039 - 39911928
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||| | ||| | |||||| |||| ||| ||||||||| ||||||||||||||| || |||||||||| || ||||||| ||||    
T  39912039 ctaacggaaaggaccaaaatatataacggagagaagttaaaggaccaaaataaaccgaattttaattaagcgaccaaagagataatatctaaataattaa 39911940  T
Q  99 gggaccaaaaat 110  Q
    ||||| ||||||    
T  39911939 gggacaaaaaat 39911928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 7041894 - 7041999
Alignment:
Q  2 taacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaag 99  Q
    ||||||| ||||||||||||||||| | |||||| |||||||| ||||||||||| |||||     |||||| ||||| |||||||  ||||||||||||    
T  7041894 taacggaaaggaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcaaattt-----aagggaccaaagcgatactatataaatagttaag 7041988  T
Q  100 ggaccaaaaat 110  Q
    |||||||||||    
T  7041989 ggaccaaaaat 7041999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 40094739 - 40094857
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    |||||||| | |||||||| |||||| | |||||| ||||||||  ||||||||||||||||||||||| ||| ||||    |||| | |||||||||||    
T  40094739 ctaacggaaatgaccaaaaagtgtaacggagagaagttaagggacaaaaataaatcgaattttaattaaaggaccaaaacagtactaattaaatagttaa 40094838  T
Q  99 gggaccaaaaatataattt 117  Q
    |||||||||||| ||||||    
T  40094839 gggaccaaaaatgtaattt 40094857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 44678394 - 44678328
Alignment:
Q  45 caaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    ||||||||||||||||||| |||||||| |||||  |||||| ||||||||||||||||||||||||    
T  44678394 caaaataaatcgaattttagttaagggaccaaagcaatactacctaaatagttaagggaccaaaaat 44678328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 29027063 - 29026970
Alignment:
Q  31 agaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaa----tagttaagggaccaaaaatataatttaa 119  Q
    |||| |||||||| |||||||||||||||||||||||||||| ||||  ||||||| |||||    |||||||||||||||||||  |||||||    
T  29027063 agaagttaagggaccaaaataaatcgaattttaattaagggaccaaaatgatactacctaaatagctagttaagggaccaaaaatgcaatttaa 29026970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 33542495 - 33542387
Alignment:
Q  12 gaccaaaatgtgtaaagagaga-atttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| |||||| | ||||   | |||||||||||  ||||||||||||||| ||||| |||||| | ||||||||||| ||||||||||    
T  33542495 gaccaaaatgtgtaaggagagagagttaaaataccaaaataaatcagattttaattaagggaccaaagcgatactaattaaatagttaaaggaccaaaaa 33542396  T
Q  110 tataattta 118  Q
    || ||||||    
T  33542395 tacaattta 33542387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 119380 - 119483
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||  |  ||||| |||||||| ||||||||| | ||||||||||||||||  |||| ||||||| ||||||||||||    
T  119380 ctaacggaaatgaccaaaatgtgtaccggtgagaagttaagggaccaaaataaagcaaattttaattaagggactaaagcgatactacctaaatagttaa 119479  T
Q  99 ggga 102  Q
    ||||    
T  119480 ggga 119483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 14920521 - 14920422
Alignment:
Q  13 accaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||| ||||| || ||||| |||||||| ||||||||||||||||||||||||  || ||||   |||||| |||||||||||||| |||||||||    
T  14920521 accaaaatatgtaacagggagaagttaagggaccaaaataaatcgaattttaattaaatgaccaaaacaatactacctaaatagttaaggaaccaaaaat 14920422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 26217156 - 26217073
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaagggaccaaaaatataattta 118  Q
    |||||||| ||||||||||  |||||||||||| ||  ||||  ||||||||| ||||||||||||||||||||| ||||||||    
T  26217156 ttaagggaccaaaataaattaaattttaattaaagggccaaaatgatactacttaaatagttaagggaccaaaaaaataattta 26217073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 26736389 - 26736508
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||  || ||||| |||| ||| || ||||||||||||||||||||| ||| ||||   |||||| ||||||||||||    
T  26736389 ctaacggaaatgaccaaaatgtgtatcgaagagaagttaaaggaccacaataaatcgaattttaattaaaggaccaaatcaatactatctaaatagttaa 26736488  T
Q  99 gggaccaaaaatataattta 118  Q
    |||| | ||||| |||||||    
T  26736489 gggatcgaaaatgtaattta 26736508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 410635 - 410736
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaagggaccaaa 107  Q
    ||||||||||||||||| ||||||||  ||||  | ||||||||||| |||||||||||||| | ||||  ||||||| | |||||||||||||| ||||    
T  410635 aggaccaaaatgtgtaatagagagaaggtaagataccaaaataaatcaaattttaattaaggaaccaaaacgatactaataaaatagttaagggatcaaa 410734  T
Q  108 aa 109  Q
    ||    
T  410735 aa 410736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 12873179 - 12873076
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    |||||||| |||| |||||||||||| | |||||| |||||  | ||||||||||  |||||||||||| ||| ||||| |||||| | |||||||||||    
T  12873179 ctaacggaaaggatcaaaatgtgtaacggagagaagttaagaaaccaaaataaattaaattttaattaaaggaccaaagtgatactaattaaatagttaa 12873080  T
Q  99 ggga 102  Q
    ||||    
T  12873079 ggga 12873076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 28206843 - 28206777
Alignment:
Q  45 caaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    ||||||| ||| |||||||||||||||| ||||| ||||||| | ||||||||| ||||||||||||    
T  28206843 caaaatacatcaaattttaattaagggaccaaagcgatactagcaaaatagttatgggaccaaaaat 28206777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 44255137 - 44255203
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaa 77  Q
    ||||||||||||||| ||||| || ||||| || |||||||||| ||||||||||||||||| ||||    
T  44255137 gaccaaaatgtgtaacagagataagttaagagaccaaaataaattgaattttaattaagggaccaaa 44255203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 44678522 - 44678595
Alignment:
Q  45 caaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataattta 118  Q
    |||||||||||||||||||||||  ||| ||||| ||||||| |||||||||||| ||| |||||||| ||||||    
T  44678522 caaaataaatcgaattttaattagaggaccaaagcgatactacctaaatagttaa-ggaacaaaaatacaattta 44678595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 110
Target Start/End: Complemental strand, 5525947 - 5525882
Alignment:
Q  46 aaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||||| |||||||||||| ||| ||||  ||||||| ||||||||||||||||| ||||||    
T  5525947 aaaataaatcaaattttaattaaaggaccaaatcgatactacctaaatagttaagggactaaaaat 5525882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 30568396 - 30568331
Alignment:
Q  3 aacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaatta 67  Q
    |||||| | ||||||||||||||| | | |||| |||||||| |||||||||||||||||||||||    
T  30568396 aacggaaatgaccaaaatgtgtaacaaatagaagttaagggaccaaaataaatcgaattttaatta 30568331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 110
Target Start/End: Original strand, 35486173 - 35486238
Alignment:
Q  46 aaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaat 110  Q
    |||||||||  |||||||||||||||| ||||| |||||| | |||||||||| ||||||||||||    
T  35486173 aaaataaattaaattttaattaagggaccaaagcgatactaattaaatagttaggggaccaaaaat 35486238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 30873073 - 30873153
Alignment:
Q  31 agaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||| |||||||||||||||||||| |||||||||||||| | ||||   |||||| | ||||| ||||||||| ||||||    
T  30873073 agaagttaagggatcaaaataaatcaaattttaattaaggaatcaaactaatactaccaaaataattaagggacaaaaaat 30873153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 36344072 - 36343965
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | ||| || |||| ||| |||||| ||||||||||||||||||||| ||||   |||||| ||||||| |||| | ||||||||    
T  36344072 gaccaaaatgtgtaacatagaaaagttaaaggaccaaaattaatcgaattttaattaagggaccaaaataatactacctaaataattaa-gaaccaaaaa 36343974  T
Q  110 tataattta 118  Q
    || ||||||    
T  36343973 tacaattta 36343965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 62
Target Start/End: Complemental strand, 18914371 - 18914320
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaatttt 62  Q
    ||||||||||||||| | |||||| |||||||| ||||||||||||||||||    
T  18914371 gaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaatttt 18914320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 44678448 - 44678515
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaatta 67  Q
    ||||| || |||||||||| |||||| ||| |||| |||| ||| |||||||||||||||||||||||    
T  44678448 ctaacagaaaggaccaaaacgtgtaacagaaagaagttaaaggaccaaaataaatcgaattttaatta 44678515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 15740699 - 15740625
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaa 109  Q
    |||||||| ||||||||||| ||||||| ||| |||| ||||  |||||| | ||||||||||| ||||||||||    
T  15740699 ttaagggaccaaaataaatcaaattttagttaggggaccaaaccgatactaattaaatagttaatggaccaaaaa 15740625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 28207062 - 28207128
Alignment:
Q  45 caaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    ||||||||||| |||||||||||||||  ||||| ||||||| | ||||| |||||||| |||||||    
T  28207062 caaaataaatcaaattttaattaaggggtcaaagcgatactagcaaaataattaagggatcaaaaat 28207128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 36344261 - 36344347
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataatttaatc 121  Q
    |||| ||||||||||||||| ||||||||||||  || |||||  |||||| |||||||||||| |||  ||||||  |||||||||    
T  36344261 ttaaaggatcaaaataaatcaaattttaattaaaagaccaaagcaatactacctaaatagttaaaggataaaaaatgcaatttaatc 36344347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 118
Target Start/End: Complemental strand, 52915065 - 52914955
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  52915065 aggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaa 52914966  T
Q  108 aatataattta 118  Q
    |||| ||||||    
T  52914965 aatacaattta 52914955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 9010797 - 9010888
Alignment:
Q  28 gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataattta 118  Q
    ||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  9010797 gagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagagatactacctaaatagttaagggaccaaaaatataattta 9010888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 46200606 - 46200495
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  46200606 ctaacggaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaaatgatactacctaaatagttaa 46200507  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  46200506 gggaccaaaaat 46200495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 48210070 - 48209951
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| | |||||| |||| ||||||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  48210070 ctaacggaaaggaccaaaatgtgtaagggagagaagttaaaggatcaaaataaatcaaattttaattaagggaccaaagtgatactacctaaatagttaa 48209971  T
Q  99 gggaccaaaaatataattta 118  Q
    |||||||||||| |||||||    
T  48209970 gggaccaaaaatgtaattta 48209951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 54136213 - 54136102
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  54136213 ctaacggaaatgaccaaaatgtgtaacagagagaaattaaaggatcaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaa 54136114  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  54136113 gggaccaaaaat 54136102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 4965993 - 4965885
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  4965993 ctaacggaaatgaccaaaatgtgtaacagagagaagttaagggatcaaaataaatcgaattttaattaagggagcaaagcgatactacctaaatagttaa 4965894  T
Q  99 gggaccaaa 107  Q
     ||||||||    
T  4965893 aggaccaaa 4965885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 27347719 - 27347600
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||| ||| ||||||||||||||||| || ||||| |||||||| |||||||||||||||||||||||| ||| ||||| ||||||| ||||||||| ||    
T  27347719 ctaatggaaaggaccaaaatgtgtaacgaagagaagttaagggaccaaaataaatcgaattttaattaaaggaccaaagcgatactatctaaatagtcaa 27347620  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||||||||||    
T  27347619 gggaccaaaaatataattta 27347600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 29864439 - 29864558
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| ||| |||| ||||| || |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  29864439 ctaacggaaaagaccaaaatgtgtaacagatagaagttaagagaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaa 29864538  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||| ||||||    
T  29864539 gggaccaaaaatacaattta 29864558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 33626128 - 33626239
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| |||||||| |||||||| ||||||||||||||||||| |||||||| ||||| ||||||| ||||||||||||    
T  33626128 ctaacggaaaagaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttagttaagggaccaaagcgatactacctaaatagttaa 33626227  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  33626228 gggaccaaaaat 33626239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 25218206 - 25218080
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    ||||| || ||||||||||||||||| |||||||| ||||||||  ||||||||||||||||||||||||||| ||||| |||| || ||||||||||||    
T  25218206 ctaacagaaaggaccaaaatgtgtaacagagagaagttaagggactaaaataaatcgaattttaattaagggaccaaagcgatattacctaaatagttaa 25218107  T
Q  99 gggaccaaaaatataatttaatcaatt 125  Q
    ||||||||||||  ||||||| |||||    
T  25218106 gggaccaaaaatgaaatttaaccaatt 25218080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 2739002 - 2738877
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||| | ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||| ||| ||||| |||||||| |||||||||||    
T  2739002 ctaacgaaaaggaccaaaatgtgtaatagagagaagttaagggaccaaaataaatcgaattttaattaaaggaccaaagcgatactacttaaatagttaa 2738903  T
Q  99 gggaccaaaaatataatttaatcaat 124  Q
    |||| |||||||  ||||||| ||||    
T  2738902 gggatcaaaaatgcaatttaaccaat 2738877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 21218122 - 21218222
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||| ||||||    
T  21218122 gaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaagggatcaaaaa 21218221  T
Q  110 t 110  Q
    |    
T  21218222 t 21218222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9010627 - 9010516
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| | |||||| |||| ||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||| ||||    
T  9010627 ctaacggaaaggaccaaaatgtgtaacaaagagaagttaaaggaccaaaataaatcgaattttaattaagggaccaaagtgatactacctaaataattaa 9010528  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  9010527 gggaccaaaaat 9010516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 33882213 - 33882324
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| | ||| || |||||||| ||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  33882213 ctaacggaaaggaccaaaatgtgtaacggagaaaagttaagggaccaaaataaatcaaattttaattaagggaccaaagcgatactacctaaatagttaa 33882312  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  33882313 gggaccaaaaat 33882324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 45911838 - 45911957
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| ||||||||  |||| || |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||     
T  45911838 ctaacggaaaagaccaaaatgtgtaacagagagaagataagagaccaaaataaatcgaattttaattaagggaccaaagtgatactacctaaatagttag 45911937  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||| ||||||    
T  45911938 gggaccaaaaatacaattta 45911957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 33625985 - 33625875
Alignment:
Q  2 taacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    ||||||| | ||||||||||||||| ||||| || |||| ||| |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||    
T  33625985 taacggaaatgaccaaaatgtgtaacagagataagttaaaggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaag 33625886  T
Q  100 ggaccaaaaat 110  Q
    |||||||||||    
T  33625885 ggaccaaaaat 33625875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 44432889 - 44432999
Alignment:
Q  2 taacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    ||||||| ||||||||||||||||| | |||||| |||||||| ||||||||||| ||||||| |||||||| ||||| ||||||| |||||||||||||    
T  44432889 taacggaaaggaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcaaattttagttaagggaccaaagtgatactatctaaatagttaag 44432988  T
Q  100 ggaccaaaaat 110  Q
    |||||||||||    
T  44432989 ggaccaaaaat 44432999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 37515728 - 37515837
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | | |||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||| |||||    
T  37515728 gaccaaaatgtgtaacaaatagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaagggactaaaaa 37515827  T
Q  110 tataatttaa 119  Q
    || |||||||    
T  37515828 taaaatttaa 37515837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 8247038 - 8247130
Alignment:
Q  28 gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataatttaa 119  Q
    ||||||| |||||||| |||||||||||||||||||||||||||| |||||| ||| || ||||||||||||||||||||||||| |||||||    
T  8247038 gagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagaaatattacctaaatagttaagggaccaaaaatacaatttaa 8247130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 46621191 - 46621311
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| |||||||| |||| ||| ||||||||||||||||||| |||| ||| ||||  ||||||| ||||||||||||    
T  46621191 ctaacggaaaggaccaaaatgtgtaacagagagaaattaaaggaccaaaataaatcgaattttagttaaaggaccaaaacgatactacctaaatagttaa 46621290  T
Q  99 gggaccaaaaatataatttaa 119  Q
    ||||||||||||  |||||||    
T  46621291 gggaccaaaaatgcaatttaa 46621311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 21217957 - 21217858
Alignment:
Q  13 accaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||||||||| | | |||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||    
T  21217957 accaaaatgtgtaacggaaagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaat 21217858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 8246889 - 8246772
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    |||||||| || |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||| ||||  |||| || ||||||| ||||     
T  8246889 ctaacggaaagaaccaaaatgtgtaacgagagaagttaagggatcaaaataaatcaaattttaattaagggaccaaaatgatattatctaaataattaa- 8246791  T
Q  100 ggaccaaaaatataattta 118  Q
    |||||||||||| ||||||    
T  8246790 ggaccaaaaatacaattta 8246772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 118
Target Start/End: Complemental strand, 45683230 - 45683120
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||| ||||||| |||| ||| ||||| ||||||| ||||||||||||| || ||||    
T  45683230 aggaccaaaatgtgtaacagagagaagttaagggatcaaaataaatcaaattttacttaaaggaccaaagcgatactacctaaatagttaagagatcaaa 45683131  T
Q  108 aatataattta 118  Q
    ||| |||||||    
T  45683130 aatgtaattta 45683120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 1157481 - 1157590
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | ||| || |||||||| |||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||||||||| |||||    
T  1157481 gaccaaaatgtgtaacggagaaaagttaagggaccaaaataaatcgaattttaattaaaggaccaaagcgatactacctaaatagttaagggactaaaaa 1157580  T
Q  110 tataatttaa 119  Q
    || |||||||    
T  1157581 tacaatttaa 1157590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 12381318 - 12381435
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    |||||||| ||||||||||||||||| | |||||| |||||||| ||||||||||||||||||||||||||||  |||| |||| |  |||||||||| |    
T  12381318 ctaacggaaaggaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcgaattttaattaagggatgaaagcgatattgcctaaatagttta 12381417  T
Q  99 gggaccaaaaatataatt 116  Q
    ||||||||||||| ||||    
T  12381418 gggaccaaaaatacaatt 12381435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 10014575 - 10014476
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||| |||||||||||||| |||||  ||||||| ||||||||||||||||||||||    
T  10014575 gaccaaaatgtgtaacagagagaagttaatggatcaaaataaatcga-ttttaattaagggaccaaagcaatactacctaaatagttaagggaccaaaaa 10014477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 10021716 - 10021617
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| |||||||| |||| ||||||||||||||||| |||||||||||||| |||||  ||||||| ||||||||||||||||||||||    
T  10021716 gaccaaaatgtgtaacagagagaagttaatggatcaaaataaatcga-ttttaattaagggaccaaagcaatactacctaaatagttaagggaccaaaaa 10021618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 31 - 118
Target Start/End: Original strand, 11242759 - 11242847
Alignment:
Q  31 agaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataattta 118  Q
    |||| |||||||| ||||||||||||||||||||| |||||| ||||| ||||||| |||||||||||||||||||||||| |||||||    
T  11242759 agaaattaagggaccaaaataaatcgaattttaatcaagggaccaaagtgatactacctaaatagttaagggaccaaaaatgtaattta 11242847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 45911701 - 45911581
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| |||||||| ||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  45911701 ctaacggaaatgaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagcgatactacctaaatagttaa 45911602  T
Q  99 gggaccaaaaatataatttaa 119  Q
     | |||||||||  |||||||    
T  45911601 tgaaccaaaaatgcaatttaa 45911581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 29864298 - 29864195
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    ||||| || |||||||| |||||||| ||||| || |||||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  29864298 ctaacagaaaggaccaacatgtgtaacagagaaaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaa 29864199  T
Q  99 ggga 102  Q
    ||||    
T  29864198 ggga 29864195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 34958953 - 34958835
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||| ||||||| ||||| || |||||| | ||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  34958953 ctaacggaaatgaccaaattgtgtaacagagataagttaaggaa-caaaataaatcaaattttaattaagggaccaaagcgatactacctaaatagttaa 34958855  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||| ||||||    
T  34958854 gggaccaaaaatacaattta 34958835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 46535644 - 46535526
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagaga-gaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| |||||||||||||| || |||| |||  ||||| | ||||||||||||||||||| |||||||| ||||| ||||||| ||||||||||||    
T  46535644 ctaacggaaaggaccaaaatgtg-aacgagaagaaactaaggaaccaaaataaatcgaattttagttaagggaccaaagcgatactacctaaatagttaa 46535546  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||| ||||||    
T  46535545 gggaccaaaaatacaattta 46535526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 43317144 - 43317254
Alignment:
Q  2 taacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    ||||||| ||||||||||||||||| |||||||| |||| ||| ||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||| |    
T  43317144 taacggaaaggaccaaaatgtgtaatagagagaagttaaaggaccaaaataaatcaaattttaattaagggaccaaagcgatactacctaaatagttagg 43317243  T
Q  100 ggaccaaaaat 110  Q
     ||| ||||||    
T  43317244 agactaaaaat 43317254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 44710516 - 44710414
Alignment:
Q  10 aggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||||||||||||||| | |||||| |||||||||||||||||||| ||||||  ||||| || ||||| ||||||| |||||||||||||||||||||    
T  44710516 aggaccaaaatgtgtaacggagagaagttaagggatcaaaataaatcaaatttttgttaagagaccaaagcgatactacctaaatagttaagggaccaaa 44710417  T
Q  108 aat 110  Q
    |||    
T  44710416 aat 44710414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 46621048 - 46620938
Alignment:
Q  2 taacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    ||||||| | ||||||||||||||| | |||||| |||| ||| |||||||||||||||||||||||||||| ||||   |||||| |||||||||||||    
T  46621048 taacggaaatgaccaaaatgtgtaacggagagaagttaaaggaccaaaataaatcgaattttaattaagggaccaaaacaatactacctaaatagttaag 46620949  T
Q  100 ggaccaaaaat 110  Q
    |||||||||||    
T  46620948 ggaccaaaaat 46620938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 53645573 - 53645463
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| |||| ||| ||||||||| |||||||||||||||||| ||||| ||||||| ||||||||||||    
T  53645573 ctaacggaaatgaccaaaatgtgtaacggagagaagttaaaggaccaaaataaaccgaattttaattaagggaccaaagcgatactatctaaatagttaa 53645474  T
Q  99 gggaccaaaaa 109  Q
    ||||| |||||    
T  53645473 gggacaaaaaa 53645463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 24504215 - 24504324
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | |||||| |||||||| |||||||||||||||||||||||| |||  |||  |||| || |||||||||||||||||||||||    
T  24504215 gaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttaattaaaggactaaaacgatattacctaaatagttaagggaccaaaaa 24504314  T
Q  110 tataatttaa 119  Q
    | ||||||||    
T  24504315 tgtaatttaa 24504324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 52915216 - 52915317
Alignment:
Q  10 aggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||||||||||||||| | |||||| |||||||| ||||||||||||||||||| |||| ||| ||||| ||||||| ||||||||||||||||| |||    
T  52915216 aggaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttagttaaaggaccaaagcgatactacctaaatagttaagggacaaaa 52915315  T
Q  108 aa 109  Q
    ||    
T  52915316 aa 52915317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18862704 - 18862816
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagag-aatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagtta 97  Q
    ||||||||  |||| |||| |||||| |||||| || |||||||| |||||||||||||||||||||||| ||| ||||| ||||||| |||||||||||    
T  18862704 ctaacggaatggacaaaaaggtgtaacagagagcaagttaagggaccaaaataaatcgaattttaattaaaggatcaaagcgatactacctaaatagtta 18862803  T
Q  98 agggaccaaaaat 110  Q
    |||||||||||||    
T  18862804 agggaccaaaaat 18862816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 25058955 - 25058835
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| |||| |||||||||||| | |||||| ||||| || ||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  25058955 ctaacggaaaggagcaaaatgtgtaacatagagaagttaagagaccaaaataaatcaaattttaattaagggaccaaagcgatactacctaaatagttaa 25058856  T
Q  99 gggaccaaaaatataatttaa 119  Q
    | ||| ||||||  |||||||    
T  25058855 gagacaaaaaatgcaatttaa 25058835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 8751409 - 8751298
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    ||||| || |||| |||||||||||| | |||||| |||||||||||||||||||||||||||| |||||||| ||||   |||||| ||||||||||||    
T  8751409 ctaacagaaaggatcaaaatgtgtaacggagagaagttaagggatcaaaataaatcgaattttagttaagggaccaaaattatactacctaaatagttaa 8751310  T
Q  99 gggaccaaaaat 110  Q
     |||||||||||    
T  8751309 aggaccaaaaat 8751298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 9657789 - 9657670
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    |||||||| | ||| ||||||||||| |||||||  |||||  ||||||||||||| |||||||||||||||| ||||  |||||| | |||||||||||    
T  9657789 ctaacggaaatgactaaaatgtgtaaggagagaaagttaagatatcaaaataaatcaaattttaattaagggaccaaaacgatactaattaaatagttaa 9657690  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||| ||||||    
T  9657689 gggaccaaaaatacaattta 9657670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 25593355 - 25593474
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | | |||| |||||||| |||||||||||||||||||||||||||| ||||   |||||  ||||||||||||    
T  25593355 ctaacggaaatgaccaaaatgtgtaacggaaagaagttaagggaccaaaataaatcgaattttaattaagggaccaaaacaatactccctaaatagttaa 25593454  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||| ||||||| ||||||    
T  25593455 gggacaaaaaatacaattta 25593474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 38866520 - 38866401
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagaga-gaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| | ||||||||||||||| | || ||| |||||| | ||||||||||| ||||||| |||| ||| ||||| |||||||| |||||||||||    
T  38866520 ctaacggaaatgaccaaaatgtgtaacgggaagaagttaaggaaccaaaataaatcaaattttagttaatggaccaaagcgatactacctaaatagttaa 38866421  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||| ||||||    
T  38866420 gggaccaaaaatacaattta 38866401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 40067470 - 40067351
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    ||||| || ||||||||||||||||| ||| |||| |||| ||| |||||||||||||||||||||||  ||| ||||| |||| || ||||||||||||    
T  40067470 ctaacagaaaggaccaaaatgtgtaacagaaagaagttaaaggaccaaaataaatcgaattttaattagaggaccaaagcgatattacctaaatagttaa 40067371  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||| ||||||| ||||||    
T  40067370 gggacaaaaaatacaattta 40067351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 43317001 - 43316883
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| | ||| || |||||||| ||||||||||  |||||||||||||||| ||||| ||||||| || |||||||||    
T  43317001 ctaacggaaaggaccaaaatgtgtaacaaagataagttaagggaccaaaataaataaaattttaattaagggaccaaagcgatactaccttaatagttaa 43316902  T
Q  99 gggaccaaaaatataattta 118  Q
     |||||||||||| ||||||    
T  43316901 -ggaccaaaaatacaattta 43316883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 27347872 - 27347962
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagg 100  Q
    ||||||||||||||| | |||||| |||||||| |||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||||    
T  27347872 gaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaatcgatactacctaaatagttaagg 27347962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 44710676 - 44710778
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaa 107  Q
    ||||| ||||||||||| |||||||| |||||||| |||||||||||||||||||||||||| | ||||  |||||||| |||||| |||||||| ||||    
T  44710676 aggactaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaaggaaccaaaacgatactacataaatacttaagggatcaaa 44710775  T
Q  108 aat 110  Q
    |||    
T  44710776 aat 44710778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 118
Target Start/End: Original strand, 54191857 - 54191967
Alignment:
Q  10 aggaccaaaatgtgtaaagag-agaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||||||||||||||| | | |||| |||| | | |||||||||||||||||||||||||||| ||||  ||| ||| |||||||||||||||||||||    
T  54191857 aggaccaaaatgtgtaatggggagaagttaatgaaccaaaataaatcgaattttaattaagggaccaaaacgatgctatctaaatagttaagggaccaaa 54191956  T
Q  108 aatataattta 118  Q
    |||| ||||||    
T  54191957 aatacaattta 54191967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 1205464 - 1205391
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaa 108  Q
    |||| ||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  1205464 ttaaaggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaa 1205391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 29970314 - 29970194
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||||| ||||||||||||||| | ||| || |||| | | ||||||||||| |||||||||||||||| ||||| ||||||| |||||||||||     
T  29970314 ctaacggataagaccaaaatgtgtaacggagataagttaatg-accaaaataaatcaaattttaattaagggatcaaagcgatactacctaaatagttat 29970216  T
Q  99 gggaccaaaaatataatttaat 120  Q
    ||||||||||||  ||||||||    
T  29970215 gggaccaaaaatgcaatttaat 29970194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 34959095 - 34959204
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| ||| |||| |||| | | |||||||||||||||||||||||||| | ||||| |||| || ||||||||||||    
T  34959095 ctaacggaaatgaccaaaatgtgtaacagaaagaaattaaagaaccaaaataaatcgaattttaattaaggaaccaaagcgataatacctaaatagttaa 34959194  T
Q  99 gggaccaaaa 108  Q
    ||||||||||    
T  34959195 gggaccaaaa 34959204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 25218348 - 25218448
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| |||||||| |||| ||| |||||||||||||||||||||||| ||| ||||  ||||||| ||||||||||||    
T  25218348 ctaacggaaatgaccaaaatgtgtaacagagagaagttaatggaccaaaataaatcgaattttaattaaaggaccaaaacgatactacctaaatagttaa 25218447  T
Q  99 g 99  Q
    |    
T  25218448 g 25218448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 32384764 - 32384656
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| ||| |||  |||| | | |||||||||||||||||||||||  ||| ||||| |||||||| ||||||||||||||||||||||    
T  32384764 gaccaaaatgtgtaacagaaagaggttaaagaaccaaaataaatcgaattttaattagaggaccaaagcgatactacctaaatagttaagggaccaaaaa 32384665  T
Q  110 tataattta 118  Q
    || ||||||    
T  32384664 tacaattta 32384656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 32385076 - 32385195
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagaga-gaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| ||||||||||||||||| | || ||| |||||| | ||||||||||| ||||||| ||||||||  |||| |||||||| |||||||||||    
T  32385076 ctaacggaaaggaccaaaatgtgtaacgggaagaagttaaggaaccaaaataaatcaaattttagttaagggat-aaagcgatactacctaaatagttaa 32385174  T
Q  99 gggaccaaaaatataatttaa 119  Q
    ||||||||||||  |||||||    
T  32385175 gggaccaaaaatgcaatttaa 32385195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 40067623 - 40067731
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| ||  |||| |||||| | |||||||||| |||||||| |||||||| ||||| |||||||| ||||||||||||||| ||||||    
T  40067623 gaccaaaatgtgtaacaggaagaagttaaggaaccaaaataaattgaattttagttaagggaccaaagcgatactacctaaatagttaagggatcaaaaa 40067722  T
Q  110 tataattta 118  Q
    || ||||||    
T  40067723 tacaattta 40067731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 28570685 - 28570796
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| ||| |||| |||| ||| ||||||||||| |||||||||||||||| ||||| ||||| | ||||||||||||    
T  28570685 ctaacggaaatgaccaaaatgtgtaacagatagaagttaaaggaccaaaataaatcaaattttaattaagggaccaaagtgataccacctaaatagttaa 28570784  T
Q  99 gggaccaaaaat 110  Q
    | || |||||||    
T  28570785 gtgatcaaaaat 28570796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 1157319 - 1157200
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatt---taagggatcaaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaagggacc 104  Q
    ||||||||||||||||| |||||||| |   ||||||| ||||||||||  |||||||||||||| | ||||| |||| |||| ||||||||||||||||    
T  1157319 aggaccaaaatgtgtaacagagagaagtacttaagggaccaaaataaattaaattttaattaaggaaccaaagcgatattacttaaatagttaagggacc 1157220  T
Q  105 aaaaatataatttaatcaat 124  Q
    ||||||  ||||||| ||||    
T  1157219 aaaaatgcaatttaaccaat 1157200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 22831061 - 22831182
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagtta 97  Q
    |||||||| ||||||||||||||||| | | ||||  |||||  | ||||||||||| |||||||||||||||| ||||| ||||||| | |||||||||    
T  22831061 ctaacggaaaggaccaaaatgtgtaatggatagaaagttaagataccaaaataaatcaaattttaattaagggaccaaagcgatactagcaaaatagtta 22831160  T
Q  98 agggaccaaaaatataatttaa 119  Q
    |||||||||||||  |||||||    
T  22831161 agggaccaaaaatccaatttaa 22831182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 1205652 - 1205752
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | | ||||  |||||||  |||||||||||||||||||||||||||  |||| ||||||  |||||||||||||||||||||||    
T  1205652 gaccaaaatgtgtaacggaaagaaggtaagggacaaaaataaatcgaattttaattaagggagaaaagcgatactgcctaaatagttaagggaccaaaaa 1205751  T
Q  110 t 110  Q
    |    
T  1205752 t 1205752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 4793863 - 4793982
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| |||||||| ||||||||||||||||||| |||||||| ||||  ||||||| |||||||  |||    
T  4793863 ctaacggaaatgaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttagttaagggaccaaaacgatactacctaaata-ataa 4793961  T
Q  99 gggaccaaaaatataatttaa 119  Q
    |||  |||||||| |||||||    
T  4793962 ggggtcaaaaatacaatttaa 4793982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 9657911 - 9658030
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaa 98  Q
    |||||||| || |||||||||||||| |||||||  |||||  | ||||||||||  ||||||||||| |||| ||||  ||||||| | ||||||||||    
T  9657911 ctaacggaaagaaccaaaatgtgtaaggagagaaagttaagataccaaaataaattaaattttaattaggggaccaaaacgatactaattaaatagttaa 9658010  T
Q  99 gggaccaaaaatataattta 118  Q
    |||| |||||||||||||||    
T  9658011 gggatcaaaaatataattta 9658030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 10014743 - 10014838
Alignment:
Q  17 aaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||||| | |||||| ||||| |||||||||||||| |||||||||||||||| |||   ||||||| ||||||||||||||||| ||||||    
T  10014743 aaatgtgtaacaaagagaagttaagagatcaaaataaatcaaattttaattaagggaccaatacgatactacctaaatagttaagggacaaaaaat 10014838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 10021884 - 10021979
Alignment:
Q  17 aaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||||| | |||||| ||||| |||||||||||||| |||||||||||||||| |||   ||||||| ||||||||||||||||| ||||||    
T  10021884 aaatgtgtaacaaagagaagttaagagatcaaaataaatcaaattttaattaagggaccaatacgatactacctaaatagttaagggacaaaaaat 10021979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 43969791 - 43969910
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| |||| |||||||| ||| | | |||| |||||||| |||| |||||||||||||||| |||||| ||||  |||||||| |||||||||||    
T  43969791 ctaacggaaaggatcaaaatgtataacaaaaagaagttaagggaccaaagtaaatcgaattttaatcaagggatcaaaacgatactacataaatagttaa 43969890  T
Q  99 gggaccaaaaatataattta 118  Q
     | |||||||||| ||||||    
T  43969891 cgaaccaaaaataaaattta 43969910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 38866674 - 38866784
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaa-taaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaa 108  Q
    ||||||||||||||| ||| |||| |||| ||||||||| ||||||||||||||||||  | | ||||| ||||||| |||||||||||||| | |||||    
T  38866674 gaccaaaatgtgtaacagaaagaagttaaaggatcaaaaataaatcgaattttaattagagtaccaaagcgatactacctaaatagttaaggaatcaaaa 38866773  T
Q  109 atataatttaa 119  Q
    ||| |||||||    
T  38866774 atacaatttaa 38866784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 46 - 118
Target Start/End: Complemental strand, 44170055 - 44169982
Alignment:
Q  46 aaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaagggaccaaaaatataattta 118  Q
    |||||||||| ||||||||| |||||| ||||| ||||||| | ||||||||||||||||||||||| ||||||    
T  44170055 aaaataaatcaaattttaatcaagggaccaaagcgatactaattaaatagttaagggaccaaaaatacaattta 44169982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 44428693 - 44428616
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaa 77  Q
    |||||||| ||||||||||||||||| | |||||| |||||||| ||||||||||| ||||||| |||||||| ||||    
T  44428693 ctaacggaaaggaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcaaattttagttaagggaccaaa 44428616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 54191710 - 54191637
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaa 73  Q
    ||||| || |||| |||||||||||| | |||||| |||||||| |||||||||||||||||||||||||||||    
T  54191710 ctaacagaaaggatcaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttaattaagggaa 54191637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 46200780 - 46200860
Alignment:
Q  31 agaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||| ||||| || |||||||||| ||||||||||||||||| ||||| | ||||| ||||||||||||| ||||||||||    
T  46200780 agaagttaagagaccaaaataaattgaattttaattaagggaccaaagcgttactacctaaatagttaagagaccaaaaat 46200860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 22830910 - 22830807
Alignment:
Q  10 aggaccaaaatgtgtaaag-agagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaa 106  Q
    ||||||||||||||||| | ||||||  |||||  | ||||||||||| |||||||||||||||| |||||  |||||| | ||||||||||||||||||    
T  22830910 aggaccaaaatgtgtaacggagagaaagttaagataccaaaataaatcaaattttaattaagggaccaaagctatactagcaaaatagttaagggaccaa 22830811  T
Q  107 aaat 110  Q
    ||||    
T  22830810 aaat 22830807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 25977880 - 25977781
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||| ||||| | |||||| |||||||| |||||||||| ||||||||||| || || ||||| |||| || ||| |||||||||||||||||||    
T  25977880 gaccaaaatatgtaacggagagaagttaagggaccaaaataaattgaattttaattgagagaccaaagcgatagtacctagatagttaagggaccaaaaa 25977781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 45683381 - 45683500
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    ||||| || ||||||||||||||||| | ||| || |||| ||| ||||||||||| ||||||| |||||| | |||||  ||| ||| |||||||||||    
T  45683381 ctaaccgaaaggaccaaaatgtgtaacggagataagttaaaggaccaaaataaatcaaattttagttaaggaaccaaagcaatattacctaaatagttaa 45683480  T
Q  99 gggaccaaaaatataattta 118  Q
    || |||||||||| ||||||    
T  45683481 ggaaccaaaaatacaattta 45683500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 119
Target Start/End: Original strand, 11102285 - 11102359
Alignment:
Q  46 aaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaagggaccaaaaatataatttaa 119  Q
    |||||||||| |||||||||||||||| ||||   |||||| | ||||||||||||||||||||||| |||||||    
T  11102285 aaaataaatcaaattttaattaagggaccaaaccaatactaattaaatagttaagggaccaaaaatacaatttaa 11102359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 118
Target Start/End: Complemental strand, 21051480 - 21051362
Alignment:
Q  2 taacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    ||||||| | ||||||||||||||| | | |||| |||| ||| ||||||||||| ||||||| ||||| || ||||| ||| ||| ||||||| |||||    
T  21051480 taacggaaatgaccaaaatgtgtaacggatagaagttaatggaccaaaataaatcaaattttagttaagagatcaaagcgatgctacctaaataattaag 21051381  T
Q  100 ggaccaaaaatataattta 118  Q
    |||| |||||| |||||||    
T  21051380 ggacaaaaaatgtaattta 21051362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 21051622 - 21051688
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaa 77  Q
    ||||||||||||||| | |||||| |||||||| ||||||||||| |||||||||||||||| ||||    
T  21051622 gaccaaaatgtgtaataaagagaagttaagggaccaaaataaatctaattttaattaagggaccaaa 21051688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 21885089 - 21885174
Alignment:
Q  2 taacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta 86  Q
    ||||||| ||||||||||||| ||| | | |||| |||||||| ||||||||||| ||||||||||||| || ||||| |||||||    
T  21885089 taacggaaaggaccaaaatgtttaacggatagaaattaagggaccaaaataaatcaaattttaattaagtgaccaaagcgatacta 21885174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 119
Target Start/End: Complemental strand, 15985543 - 15985468
Alignment:
Q  45 caaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataatttaa 119  Q
    ||||||||||| |||||||||||||||| ||||  ||||||| | ||||||||||| ||||||||||  |||||||    
T  15985543 caaaataaatcaaattttaattaagggaccaaaacgatactagcaaaatagttaagagaccaaaaatgcaatttaa 15985468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 24504052 - 24503993
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaa 68  Q
    |||||||| |||||||| |||||||| ||||| || ||||||||||||||||||||||||    
T  24504052 aggaccaagatgtgtaacagagagaagttaagagaccaaaataaatcgaattttaattaa 24503993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 4966132 - 4966234
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||| ||| | |||||| ||||| ||  ||||||||||||||||||||||||| | ||||  ||||| | ||||||||||||    
T  4966132 ctaacggaaatgaccaaaatgtataatggagagaagttaagagacaaaaataaatcgaattttaattaaggaatcaaaacgataccacctaaatagttaa 4966231  T
Q  99 ggg 101  Q
    |||    
T  4966232 ggg 4966234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 44170290 - 44170356
Alignment:
Q  45 caaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaat 110  Q
    ||||||||||| |||||||||||||||| |||||  ||||| | ||||||||||||||| |||||||    
T  44170290 caaaataaatcaaattttaattaagggatcaaagcaatactaattaaatagttaagggatcaaaaat 44170356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 42779642 - 42779573
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaag 69  Q
    |||||||| | ||||||||||||||| | ||| || |||| |||| ||||||||||||||||||||||||    
T  42779642 ctaacggaaaagaccaaaatgtgtaacaaagataaattaacggattaaaataaatcgaattttaattaag 42779573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 44428597 - 44428524
Alignment:
Q  38 aagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||| ||||||||||| ||||||| |||||||| ||||| |||| || |||||||||||||| | |||||||    
T  44428597 aagggaccaaaataaatcaaattttagttaagggaccaaagcgataatacctaaatagttaaggtatcaaaaat 44428524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 46535786 - 46535905
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    ||||| || ||||||||||||| ||  ||| |||| |||| ||| ||| |||||| ||||||||||||  ||| ||||   ||||||| |||||||||||    
T  46535786 ctaacagaaaggaccaaaatgtataccagaaagaagttaaaggaccaagataaatagaattttaattagaggaccaaaacaatactacctaaatagttaa 46535885  T
Q  99 gggaccaaaaatataattta 118  Q
    | ||||||||||| ||||||    
T  46535886 gtgaccaaaaatacaattta 46535905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 37515634 - 37515550
Alignment:
Q  17 aaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    |||||||||| || ||||| ||||||||  |||||||||  |||||||||||| ||| ||| | ||||||| |||||||||||||    
T  37515634 aaatgtgtaacgaagagaagttaagggacaaaaataaattaaattttaattaaaggatcaacgggatactacctaaatagttaag 37515550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 109)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 34630104 - 34629984
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| ||||||||||||||||| | |||||| |||| ||| |||||||||||||||||||||||||||| ||||  |||||||| |||||||||||    
T  34630104 ctaacggaaaggaccaaaatgtgtaacggagagaagttaatggaccaaaataaatcgaattttaattaagggaccaaaacgatactacttaaatagttaa 34630005  T
Q  99 gggaccaaaaatataatttaa 119  Q
    |||||||||||||||||||||    
T  34630004 gggaccaaaaatataatttaa 34629984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 34521388 - 34521277
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||| ||||    
T  34521388 ctaacggaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaataattaa 34521289  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  34521288 gggaccaaaaat 34521277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 45871819 - 45871708
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | |||| |||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  45871819 ctaacggaaatgacccaaatgtataacagagagaatttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaa 45871720  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  45871719 gggaccaaaaat 45871708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 7274918 - 7275017
Alignment:
Q  12 gaccaaaatgtgtaaagagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||||||||||  |||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||| |||||||||||    
T  7274918 gaccaaaatgtgtaacaagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagtgatactacctaaatagttaacggaccaaaaat 7275017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 10756840 - 10756721
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| || | |||||||||||| |||||||| |||||||| ||||||||||||||||||| |||||||| ||||| ||||||| |||||||| |||    
T  10756840 ctaacggaaagcaacaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttagttaagggaccaaagcgatactacctaaatagctaa 10756741  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||| ||||||    
T  10756740 gggaccaaaaatacaattta 10756721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 26332441 - 26332330
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| |||||||| |||||||| |||||||||| ||| ||||||||||||| ||||| ||||||| |||||||||||     
T  26332441 ctaacggaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaattgaaatttaattaagggaccaaagcgatactacctaaatagttag 26332342  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  26332341 gggaccaaaaat 26332330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 54107791 - 54107680
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| |||| ||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  54107791 ctaacggaaatgaccaaaatgtgtaacggagagaagttaaaggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaa 54107692  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  54107691 gggaccaaaaat 54107680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 28688255 - 28688373
Alignment:
Q  2 taacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    ||||||| |||||||||| |||||| | |||||| |||||||| ||||||||||| |||||||||||||||| ||||| ||||||| |||||||||||||    
T  28688255 taacggaaaggaccaaaacgtgtaacaaagagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagcgatactacctaaatagttaag 28688354  T
Q  100 ggaccaaaaatataattta 118  Q
    |||| |||||| |||||||    
T  28688355 ggacaaaaaatgtaattta 28688373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 12123343 - 12123463
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | | |||| |||||||| ||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  12123343 ctaacggaaatgaccaaaatgtgtaacggaaagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagcgatactacctaaatagttaa 12123442  T
Q  99 gggaccaaaaatataatttaa 119  Q
    ||||||||||||  |||||||    
T  12123443 gggaccaaaaatgaaatttaa 12123463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 40410822 - 40410714
Alignment:
Q  13 accaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||||||||| | |||||| |||||||| ||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||    
T  40410822 accaaaatgtgtaacaaagagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaat 40410723  T
Q  111 ataatttaa 119  Q
      |||||||    
T  40410722 gcaatttaa 40410714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 41208523 - 41208403
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| | |||||||||||| || | |||||| |||||||| ||||||||||| |||||||||||||||| ||||| |||||||| |||||||||||    
T  41208523 ctaacggaaatgaccaaaatgtgcaacggagagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagcgatactacttaaatagttaa 41208424  T
Q  99 gggaccaaaaatataatttaa 119  Q
    ||||||||||||  |||||||    
T  41208423 gggaccaaaaatgcaatttaa 41208403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 41997930 - 41997822
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| |||||||| |||||||| ||||||||||  |||||||||||||||| ||||  ||||||| |||||||||||||||||||||||    
T  41997930 gaccaaaatgtgtaatagagagaagttaagggaccaaaataaattaaattttaattaagggaccaaaacgatactacctaaatagttaagggaccaaaaa 41997831  T
Q  110 tataattta 118  Q
    | |||||||    
T  41997830 tgtaattta 41997822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 54081563 - 54081667
Alignment:
Q  16 aaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatata 113  Q
    ||||||||||| |||||||| |||||| | |||||||||||||||||||||||||||| |||||  |||||| ||||||||||||||||||||||||| |    
T  54081563 aaaatgtgtaacagagagaagttaaggaaccaaaataaatcgaattttaattaagggaccaaagcaatactacctaaatagttaagggaccaaaaataca 54081662  T
Q  114 attta 118  Q
    |||||    
T  54081663 attta 54081667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 4846860 - 4846971
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | | ||||||||||||| |||||||| ||| | || |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  4846860 ctaacggaaatggccaaaatgtgtaacagagagaagttatgagaccaaaataaatcgaattttaattaagggatcaaagcgatactacctaaatagttaa 4846959  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  4846960 gggaccaaaaat 4846971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 12123212 - 12123101
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| || |||||||||||||| || ||||| |||||| | |||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  12123212 ctaacggaaagaaccaaaatgtgtaacgaagagaagttaaggaaccaaaataaatcgaattttaattaagggaccaaaatgatactacctaaatagttaa 12123113  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  12123112 gggaccaaaaat 12123101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 15862439 - 15862550
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| | |||||| |||||||| |||||||||| |||||||||| ||||||  |||||||||||| ||||||||||||    
T  15862439 ctaacggaaaggaccaaaatgtgtaacaaagagaagttaagggaccaaaataaattgaattttaataaagggacaaaagagatactacctaaatagttaa 15862538  T
Q  99 gggaccaaaaat 110  Q
    ||||| ||||||    
T  15862539 gggacaaaaaat 15862550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 43899233 - 43899122
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||| ||||  |||  || ||||||||||||    
T  43899233 ctaacggaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaaacgatgttacctaaatagttaa 43899134  T
Q  99 gggaccaaaaat 110  Q
     |||||||||||    
T  43899133 aggaccaaaaat 43899122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 45871953 - 45872064
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| |||||| |||||| ||| | ||||||||||||| | |||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||    
T  45871953 ctaacggaaaggacccaaatgtataacggagagaatttaaggaaccaaaataaatcgaattttaattaagggaccaaaacgatactacctaaatagttaa 45872052  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  45872053 gggaccaaaaat 45872064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 7743029 - 7743139
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| ||||| || ||| | || ||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  7743029 ctaacggaaaggaccaaaatgtgtaacagagataagttatgagaccaaaataaatcaaattttaattaagggatcaaagcgatactacctaaatagttaa 7743128  T
Q  99 gggaccaaaaa 109  Q
    |||||||||||    
T  7743129 gggaccaaaaa 7743139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 21169760 - 21169662
Alignment:
Q  28 gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataatttaatcaatt 125  Q
    ||||||| |||||||| ||||||||||| |||||||||||||||| ||||  ||||||| ||||||||||||| ||||||||||| |||||||||||||    
T  21169760 gagagaagttaagggaccaaaataaatcaaattttaattaagggaccaaaacgatactacctaaatagttaagagaccaaaaatacaatttaatcaatt 21169662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 41208665 - 41208775
Alignment:
Q  2 taacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    ||||||| ||||||||||||||||| |||||||  ||||||||  |||||||||| |||||||||||||||| ||||| ||||||| |||||||||||||    
T  41208665 taacggaaaggaccaaaatgtgtaacagagagatgttaagggactaaaataaatcaaattttaattaagggaccaaagcgatactacctaaatagttaag 41208764  T
Q  100 ggaccaaaaat 110  Q
    |||| ||||||    
T  41208765 ggactaaaaat 41208775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 118
Target Start/End: Original strand, 44069396 - 44069506
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||||||||||||||| ||| |||| |||| ||| |||||||||||||||||||||||  ||| ||||| ||||||| |||||||||||||||||||||    
T  44069396 aggaccaaaatgtgtaacagaaagaagttaaaggaccaaaataaatcgaattttaattagaggaccaaagcgatactacctaaatagttaagggaccaaa 44069495  T
Q  108 aatataattta 118  Q
    |||| ||||||    
T  44069496 aatacaattta 44069506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 52609639 - 52609737
Alignment:
Q  14 ccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    ||||||| ||||| |||||||| |||||||| |||||||||||||||||||||||||||| ||||| |||| || ||||||||||||||||||||||||    
T  52609639 ccaaaatatgtaacagagagaaattaagggaccaaaataaatcgaattttaattaagggaccaaagcgatagtacctaaatagttaagggaccaaaaat 52609737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 52606250 - 52606141
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| |||||||| ||||||||||| |||||||||||||||| ||||  |||||||| |||||||||||    
T  52606250 ctaacggaaatgaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcaaattttaattaagggaccaaaacgatactacataaatagttaa 52606151  T
Q  99 gggaccaaaa 108  Q
    ||||||||||    
T  52606150 gggaccaaaa 52606141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 34521533 - 34521641
Alignment:
Q  13 accaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||||||||| | | |||| ||||| || |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||    
T  34521533 accaaaatgtgtaacggaaagaaattaagagaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaat 34521632  T
Q  111 ataatttaa 119  Q
      |||||||    
T  34521633 gcaatttaa 34521641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 28 - 119
Target Start/End: Original strand, 35753723 - 35753815
Alignment:
Q  28 gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataatttaa 119  Q
    ||||||| |||||||||||||||||||||||||| |||||| ||| ||||| ||||||| |||||||||||||| ||||||||| ||||||||    
T  35753723 gagagaagttaagggatcaaaataaatcgaatttaaattaatggaccaaagcgatactacctaaatagttaaggtaccaaaaatgtaatttaa 35753815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 7937827 - 7937938
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||| | ||||||||||||||||| | |||||| ||||| || |||||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  7937827 ctaacgaaaaggaccaaaatgtgtaacggagagaagttaagagaccaaaataattcgaattttaattaagggaccaaagtgatactacctaaatagttaa 7937926  T
Q  99 gggaccaaaaat 110  Q
     |||||||||||    
T  7937927 aggaccaaaaat 7937938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 27940394 - 27940283
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| || ||||| ||||||||||| ||||| |||||||||| ||||| ||||||| ||||||||||||    
T  27940394 ctaacggaaatgaccaaaatgtgtaacggagagaagtttagggaccaaaataaatcaaatttaaattaagggaccaaagtgatactacctaaatagttaa 27940295  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  27940294 gggaccaaaaat 27940283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 44069245 - 44069134
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagaga-gaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| | || ||| |||||| | ||||||||||||||||||| |||||||| ||||  ||||||| ||||||||||||    
T  44069245 ctaacggaaaggaccaaaatgtgtaacgggaagaagttaaggaaccaaaataaatcgaattttagttaagggaccaaaacgatactacctaaatagttaa 44069146  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  44069145 gggaccaaaaat 44069134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 45171190 - 45171071
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | |||||||||||||||   |||||| |||||||| |||||||||||||||||||||||||||  |||||  |||||| ||||||||||||    
T  45171190 ctaacggaaatgaccaaaatgtgtaacttagagaagttaagggaccaaaataaatcgaattttaattaaggggccaaagcaatactacctaaatagttaa 45171091  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||| ||||| ||||||    
T  45171090 gggaccagaaatacaattta 45171071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 45171331 - 45171442
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | | |||| |||||||| |||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||||    
T  45171331 ctaacggaaatgaccaaaatgtgtaatggaaagaaattaagggaccaaaataaatcgaattttaattaatggaccaaagcgatactacctaaatagttaa 45171430  T
Q  99 gggaccaaaaat 110  Q
    ||||| ||||||    
T  45171431 gggactaaaaat 45171442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 50819342 - 50819231
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| | ||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||| ||  |||| ||| |||| |||||||||||    
T  50819342 ctaacggaaatgaccaaaatgtgtaacagagataagttaagggaccaaaataaatcgaattttaattaagcgacgaaagcgatgctacgtaaatagttaa 50819243  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  50819242 gggaccaaaaat 50819231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 50856522 - 50856633
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| | ||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||| ||  |||| ||| |||| |||||||||||    
T  50856522 ctaacggaaatgaccaaaatgtgtaacagagataagttaagggaccaaaataaatcgaattttaattaagcgacgaaagcgatgctacgtaaatagttaa 50856621  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  50856622 gggaccaaaaat 50856633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 53841290 - 53841401
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| |||||||| ||||||||||||||||||||||| | || |||||  |||||| ||||||||||||    
T  53841290 ctaacggaaatgaccaaaatgtgtaacggagagaaattaagggaccaaaataaatcgaattttaattacgagaccaaagcaatactagctaaatagttaa 53841389  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  53841390 gggaccaaaaat 53841401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 54108396 - 54108495
Alignment:
Q  13 accaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||||| ||| ||||| || |||||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||| ||||||||||||||||    
T  54108396 accaaaatgtataacagagaaaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactagctaaataattaagggaccaaaaat 54108495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 35580224 - 35580333
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | |||||| |||| ||| ||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||||||||||||||    
T  35580224 gaccaaaatgtgtaacggagagaagttaaaggaccaaaataaatcaaattttaattaagggaccaaatcgatactacctaaatagttaagggaccaaaaa 35580323  T
Q  110 tataatttaa 119  Q
    |  |||||||    
T  35580324 tgcaatttaa 35580333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 12 - 119
Target Start/End: Complemental strand, 54081394 - 54081286
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaa 109  Q
    ||||||||| ||||| |||||||| ||||||||  ||||||||||||||||||||||| ||| ||||| ||||||  |||||||||||||||||||||||    
T  54081394 gaccaaaatatgtaacagagagaagttaagggactaaaataaatcgaattttaattaa-ggaccaaagcgatactgcctaaatagttaagggaccaaaaa 54081296  T
Q  110 tataatttaa 119  Q
    || |||||||    
T  54081295 tacaatttaa 54081286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 15862293 - 15862193
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | |||||| |||||||| |||||||||||||||||||||||| ||| ||||| ||||||| ||||||| |||||||||| ||||    
T  15862293 gaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcgaattttaattaaaggaccaaagcgatactacctaaataattaagggacctaaaa 15862194  T
Q  110 t 110  Q
    |    
T  15862193 t 15862193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 26332582 - 26332697
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagag-----aatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaata 93  Q
    |||||||| ||||||||||||||||| ||||||     || |||||||| |||||||||||||||||||||||||||| ||||| ||||||| |||||||    
T  26332582 ctaacggaaaggaccaaaatgtgtaacagagagaagttaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaata 26332681  T
Q  94 gttaagggaccaaaaat 110  Q
    ||||| |||||||||||    
T  26332682 gttaa-ggaccaaaaat 26332697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 40926133 - 40926013
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| |||| ||||||||||||||| ||||||||||||| || ||||| |||||||| |||||||||||    
T  40926133 ctaacggaaatgaccaaaatgtgtaacggagagaagttaatggatcaaaataaatcaaattttaattaagagatcaaagcgatactacataaatagttaa 40926034  T
Q  99 gggaccaaaaatataatttaa 119  Q
      ||||||||||  |||||||    
T  40926033 aagaccaaaaatgcaatttaa 40926013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19124311 - 19124200
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    ||||| || ||||||||||||||||| || ||||| ||||| |||||||||| ||||||||||||||| |||| |||||  ||| ||| |||||||||||    
T  19124311 ctaacagaaaggaccaaaatgtgtaacgaagagaagttaagagatcaaaatagatcgaattttaattaggggaccaaagcaatattacttaaatagttaa 19124212  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  19124211 gggaccaaaaat 19124200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 10 - 119
Target Start/End: Complemental strand, 37133390 - 37133279
Alignment:
Q  10 aggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaa 107  Q
    ||||||||||||||||| || ||||| |||||  | ||||||||||| |||||||||||||||| ||||| |||||| | ||||||| ||||||||||||    
T  37133390 aggaccaaaatgtgtaacgaagagaagttaagataccaaaataaatcaaattttaattaagggaccaaagcgatactaattaaatagctaagggaccaaa 37133291  T
Q  108 aatataatttaa 119  Q
    || |||||||||    
T  37133290 aacataatttaa 37133279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 43899338 - 43899449
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||  ||||||||||| ||||| | |||||| |||||||| ||||||||||||||||||||||| |||| ||||| |||| || ||||||||||||    
T  43899338 ctaacggtaaggaccaaaatatgtaacggagagaagttaagggaccaaaataaatcgaattttaattaggggaccaaagcgatattacctaaatagttaa 43899437  T
Q  99 gggaccaaaaat 110  Q
    || |||||||||    
T  43899438 ggaaccaaaaat 43899449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 118
Target Start/End: Complemental strand, 28691227 - 28691117
Alignment:
Q  10 aggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    |||| |||||||||||| | ||| || |||||||| ||||||||||||||||||| ||||||||||||||  |||| | ||||||| |||||||||||||    
T  28691227 aggatcaaaatgtgtaatgcagaaaagttaagggaccaaaataaatcgaattttagttaagggaacaaagcaataccacctaaataattaagggaccaaa 28691128  T
Q  108 aatataattta 118  Q
    |||| ||||||    
T  28691127 aatacaattta 28691117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 22355063 - 22354946
Alignment:
Q  2 taacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    ||||||| ||||||||||||||||| | ||| || |||||||| ||||||||||| |||||||||||| | | ||||  ||||||| |||||||||||||    
T  22355063 taacggaaaggaccaaaatgtgtaacacagaaaagttaagggaccaaaataaatcaaattttaattaaagaaccaaaacgatactacctaaatagttaag 22354964  T
Q  100 ggaccaaaaatataattt 117  Q
    |||| ||||||| |||||    
T  22354963 ggactaaaaatacaattt 22354946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 28691388 - 28691497
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| |||||||| ||||  |||||||||||||| |||||||||| |||||  |||| ||||||| ||||||| ||||||||| |||||    
T  28691388 gaccaaaatgtgtaacagagagaagttaaatgatcaaaataaatcaaattttaatttagggacaaaagcgatactacctaaataattaagggacaaaaaa 28691487  T
Q  110 tataatttaa 119  Q
    || |||||||    
T  28691488 tacaatttaa 28691497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 40969521 - 40969638
Alignment:
Q  4 acggataggaccaaaatgtgtaaagagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaaggg 101  Q
    ||||| |||||||||||||||||  ||||||  |||||  | ||||||||||| ||||||||||||| ||  |||| ||||||| | |||||||||||||    
T  40969521 acggaaaggaccaaaatgtgtaagaagagaaagttaagataccaaaataaatcaaattttaattaagagactaaagcgatactaattaaatagttaaggg 40969620  T
Q  102 accaaaaatataatttaa 119  Q
    ||||||||||||||||||    
T  40969621 accaaaaatataatttaa 40969638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 17274052 - 17274160
Alignment:
Q  13 accaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||||||||| || ||||| ||||| || |||||||| |||||||||||||||  || ||||| ||||||| |||||||||||| |||||||||||    
T  17274052 accaaaatgtgtaacgatgagaaattaagagaccaaaataattcgaattttaattaaaagaccaaagcgatactacctaaatagttaaaggaccaaaaat 17274151  T
Q  111 ataatttaa 119  Q
    | |||||||    
T  17274152 acaatttaa 17274160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 7950397 - 7950286
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| || |||||||||||||| ||||| || |||| ||| ||||||||||||||||||||||||| || ||||   ||||||| |||||||||||    
T  7950397 ctaacggaaagaaccaaaatgtgtaacagagaaaagttaaaggaccaaaataaatcgaattttaattaagagaccaaaacaatactacataaatagttaa 7950298  T
Q  99 gggaccaaaaat 110  Q
    ||||| ||||||    
T  7950297 gggactaaaaat 7950286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 8846340 - 8846451
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| ||||  || |||||||||| |||||||| ||||| || ||||| |||||||| |||||||||||    
T  8846340 ctaacggaaatgaccaaaatgtgtaacaaagagaagttaaaagaccaaaataaatggaattttagttaagtgaccaaagcgatactacctaaatagttaa 8846439  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  8846440 gggaccaaaaat 8846451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 14353339 - 14353430
Alignment:
Q  28 gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataattta 118  Q
    ||||||| |||| ||| ||| ||||||||||||||| |||||||| ||| | ||||||| ||||||||||||||||||||||||| ||||||    
T  14353339 gagagaagttaaaggaccaagataaatcgaattttatttaagggaccaatgcgatactacctaaatagttaagggaccaaaaatacaattta 14353430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 19124448 - 19124554
Alignment:
Q  13 accaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||||||||| ||||| || | ||| || ||||||||||| |||||||||||||||| ||||  ||||||| |||||||||||| |||||||||||    
T  19124448 accaaaatgtgtaacagagaaaagtcaagagaccaaaataaatcaaattttaattaagggaccaaaacgatactacctaaatagttaa-ggaccaaaaat 19124546  T
Q  111 ataattta 118  Q
    ||||||||    
T  19124547 ataattta 19124554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 35753489 - 35753414
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||| |||||||||||||||||||||||||  | ||||| ||||||| ||||||||||||||||||||||||    
T  35753489 ttaagggaccaaaataaatcgaattttaattaagaaaccaaagcgatactacctaaatagttaagggaccaaaaat 35753414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 8846197 - 8846087
Alignment:
Q  2 taacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    ||||||| | ||||||||||||||| | |||||| |||||||| |||||| |||||||||||| ||||| || ||||   |||||| |||||||||||||    
T  8846197 taacggaaatgaccaaaatgtgtaacaaagagaagttaagggaccaaaattaatcgaattttagttaagagaccaaaacaatactacctaaatagttaag 8846098  T
Q  100 ggaccaaaaat 110  Q
    |||||||||||    
T  8846097 ggaccaaaaat 8846087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 31513976 - 31513874
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||||||||||||||| | |||||| |||| ||| ||||||||||| |||||||||||| | | ||||| ||||||| |||||||||||| ||||||||    
T  31513976 aggaccaaaatgtgtaacatagagaagttaaaggaccaaaataaatcaaattttaattaaagaatcaaagcgatactacctaaatagttaatggaccaaa 31513877  T
Q  108 aat 110  Q
    |||    
T  31513876 aat 31513874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 46766924 - 46766997
Alignment:
Q  46 aaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataattta 118  Q
    |||||||||| |||||||||||||||| ||||| ||||||| | ||||||||||||||||||||||| ||||||    
T  46766924 aaaataaatcaaattttaattaagggaccaaagcgatactagcaaaatagttaagggaccaaaaatacaattta 46766997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 31514137 - 31514237
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||| ||||||| | ||| || |||||||| |||||||||| ||||||||||||| ||| ||||| ||||||| ||||||||||||||||| |||||    
T  31514137 gaccaaactgtgtaacggagaaaagttaagggaccaaaataaattgaattttaattaaaggaccaaagcgatactacctaaatagttaagggactaaaaa 31514236  T
Q  110 t 110  Q
    |    
T  31514237 t 31514237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 40639392 - 40639500
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaa 109  Q
    ||||||||| ||||| |||||||| |||||  | ||| ||||||| |||||||||||||||| ||||| |||||| | ||||||||||| ||||||||||    
T  40639392 gaccaaaatatgtaacagagagaagttaagataccaatataaatcaaattttaattaagggaccaaagcgatactaattaaatagttaaaggaccaaaaa 40639491  T
Q  110 tataattta 118  Q
     ||||||||    
T  40639492 cataattta 40639500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 5348700 - 5348581
Alignment:
Q  2 taacggataggaccaaaatgtgtaaagagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaag 99  Q
    ||||||| | ||||||||||||||| |||||||  |||||  | ||||||||||| |||||||||| ||||| ||||| |||||| | ||||||||||||    
T  5348700 taacggaaatgaccaaaatgtgtaaggagagaaagttaagataccaaaataaatcaaattttaattgagggaccaaagcgatactaattaaatagttaag 5348601  T
Q  100 ggaccaaaaatataatttaa 119  Q
    |||| ||||||  |||||||    
T  5348600 ggactaaaaatgcaatttaa 5348581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 9028277 - 9028194
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaatataattta 118  Q
    ||||| || ||||||||||| |||||||| | ||||| ||||| |||||||| ||||||||||||||||||||||| |||||||    
T  9028277 ttaagagaacaaaataaatcaaattttaacttagggaccaaagtgatactacctaaatagttaagggaccaaaaatgtaattta 9028194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 33812845 - 33812726
Alignment:
Q  2 taacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    ||||||| | ||| ||||||||||| | | |||| |||| ||||||||||||||| |||||||||||| | | |||||  |||||| |||||||||||||    
T  33812845 taacggaaatgacgaaaatgtgtaacggatagaagttaaaggatcaaaataaatcaaattttaattaaagaaccaaagcaatactacctaaatagttaag 33812746  T
Q  100 ggaccaaaaatataatttaa 119  Q
    |||||||||||  |||||||    
T  33812745 ggaccaaaaatgaaatttaa 33812726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 40926276 - 40926398
Alignment:
Q  2 taacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    ||||||| | ||||||||||||||| |||| ||| |||||| | ||||||||||| |||||||||||| ||| ||||| ||||||| ||||||||||| |    
T  40926276 taacggaaatgaccaaaatgtgtaacagagtgaagttaagg-accaaaataaatcaaattttaattaatggaccaaagtgatactacctaaatagttagg 40926374  T
Q  100 ggaccaaaaatataatttaatcaa 123  Q
    |||| ||||||  |||||| ||||    
T  40926375 ggactaaaaatgcaatttagtcaa 40926398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 10756973 - 10757091
Alignment:
Q  2 taacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaag 99  Q
    ||||||| | || |||||||||||| | |||||| ||||| || |||||||||| ||||||||||||||||| ||||  ||||||  ||||||||||||     
T  10756973 taacggaaaagatcaaaatgtgtaacggagagaaattaagagaccaaaataaattgaattttaattaagggaccaaaacgatactgcctaaatagttaaa 10757072  T
Q  100 ggaccaaaaatataattta 118  Q
    |||| ||||||| ||||||    
T  10757073 ggacaaaaaatacaattta 10757091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 41998135 - 41998197
Alignment:
Q  57 aattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaatataattta 118  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||||||||||||| ||||||    
T  41998135 aattttaattaagggaccaaagtgatactacctaaatagttaagggaccaaaaatacaattta 41998197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 118
Target Start/End: Complemental strand, 47891626 - 47891516
Alignment:
Q  10 aggaccaaaatgtgtaaagag-agaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaa 107  Q
    ||||||||||||||||| ||  |||| |||||  | ||||||||||| |||||||||||||||| ||||| |||||| | ||||| ||||||||||||||    
T  47891626 aggaccaaaatgtgtaacgaatagaagttaagataccaaaataaatcaaattttaattaagggaccaaagcgatactaattaaattgttaagggaccaaa 47891527  T
Q  108 aatataattta 118  Q
     | ||||||||    
T  47891526 tacataattta 47891516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 50819490 - 50819592
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||| ||||||||||| | | |||| | |||||| |||||||||||||||||||||||||||| ||||| ||||||| || || ||||||| |||||||    
T  50819490 aggacgaaaatgtgtaacacatagaagtaaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactaccttaacagttaagagaccaaa 50819589  T
Q  108 aat 110  Q
    |||    
T  50819590 aat 50819592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 50856374 - 50856272
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||| ||||||||||| | | |||| | |||||| |||||||||||||||||||||||||||| ||||| ||||||| || || ||||||| |||||||    
T  50856374 aggacgaaaatgtgtaacacatagaagtaaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactaccttaacagttaagagaccaaa 50856275  T
Q  108 aat 110  Q
    |||    
T  50856274 aat 50856272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 102
Target Start/End: Original strand, 53678699 - 53678800
Alignment:
Q  3 aacggataggaccaaaatgtgtaaagagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagg 100  Q
    |||||| || |||||||||||||| |||||||  |||||  | ||||||||||| |||||||||||||||| ||||| |||||| | |||||||||||||    
T  53678699 aacggaaagaaccaaaatgtgtaaggagagaaagttaagataccaaaataaatcaaattttaattaagggaccaaagcgatactaattaaatagttaagg 53678798  T
Q  101 ga 102  Q
    ||    
T  53678799 ga 53678800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 7937719 - 7937639
Alignment:
Q  46 aaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataatttaatcaatt 125  Q
    ||||| ||||||||||||||||||||| ||||| ||||||| |||||||||||||  |||||||||  |||||| ||||||    
T  7937719 aaaatgaatcgaattttaattaagggaccaaagcgatactacctaaatagttaagcaaccaaaaatgcaatttagtcaatt 7937639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 14353132 - 14353048
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataatttaa 119  Q
    ||||||||  |||||||||| |||||||||||||||| ||||| ||||||| ||||||| |||||||| |||||||  |||||||    
T  14353132 ttaagggactaaaataaatcaaattttaattaagggaccaaagcgatactacctaaataattaagggatcaaaaatgcaatttaa 14353048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 17273888 - 17273788
Alignment:
Q  12 gaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatac-tactaaatagttaagggaccaaaaa 109  Q
    ||||||||| ||||| || ||||| |||| ||| |||||||||||||||||||||||||| | ||||  |||||   |||||||||||||||||||||||    
T  17273888 gaccaaaatatgtaatgaagagaagttaaaggaccaaaataaatcgaattttaattaaggaatcaaaacgatacggcctaaatagttaagggaccaaaaa 17273789  T
Q  110 t 110  Q
    |    
T  17273788 t 17273788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 87
Target Start/End: Complemental strand, 28688101 - 28688025
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac 87  Q
    ||||||||||||||  | |||||| |||||||| ||||||||||| |||||||||||||||| ||||| ||||||||    
T  28688101 gaccaaaatgtgtaccggagagaagttaagggaccaaaataaatcaaattttaattaagggatcaaagtgatactac 28688025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 40969366 - 40969266
Alignment:
Q  12 gaccaaaatgtgtaaagagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaa 109  Q
    |||||||||||||||  ||||||  |||||  | ||||||||||| |||||||||||||||| ||||| |||||| | |||||||||||||||| |||||    
T  40969366 gaccaaaatgtgtaagaagagaaagttaagataccaaaataaatcaaattttaattaagggaccaaagcgatactaattaaatagttaagggactaaaaa 40969267  T
Q  110 t 110  Q
    |    
T  40969266 t 40969266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 51170660 - 51170756
Alignment:
Q  16 aaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    ||||||||||| | |||||| |||| ||| ||||||||||||||||||||||||  || ||||  ||||||| |||||||||||||||| |||||||    
T  51170660 aaaatgtgtaacatagagaagttaaaggaccaaaataaatcgaattttaattaaatgatcaaaacgatactacctaaatagttaagggatcaaaaat 51170756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 2078781 - 2078856
Alignment:
Q  45 caaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaatataatttaa 119  Q
    ||||||||||| |||||||||||||||| ||||| |||| | | |||||||||||||||| ||||||| |||||||    
T  2078781 caaaataaatcaaattttaattaagggaccaaagcgatattaattaaatagttaagggactaaaaatacaatttaa 2078856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 17102641 - 17102728
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac 87  Q
    |||||||| ||||||||||| | ||| |||||||| |||| ||| ||||||||||||||||||| |||| ||| ||||| ||||||||    
T  17102641 ctaacggaaaggaccaaaatctataagagagagaagttaaaggaccaaaataaatcgaattttatttaatggaccaaagcgatactac 17102728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 33773100 - 33773179
Alignment:
Q  45 caaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaatataatttaatcaa 123  Q
    ||||||||||| ||||||||| |||||| ||||| |||||| | |||||||||||||||||||||| | |||||| ||||    
T  33773100 caaaataaatcaaattttaatcaagggatcaaagtgatactaattaaatagttaagggaccaaaaacacaatttagtcaa 33773179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 33812843 - 33812918
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    ||||| |||||||||||||| ||||||||||||||||  |||| ||||||| ||||||| ||||| ||||||||||    
T  33812843 ttaagagatcaaaataaatcaaattttaattaagggactaaagcgatactacctaaatatttaagagaccaaaaat 33812918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 49222147 - 49222040
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| |||||||| || | | | | ||||||||||||||||||||||  || | |||  ||||||| ||||||||||||||||||||||    
T  49222147 gaccaaaatgtgtaacagagagaagttgaagaaccgaaataaatcgaattttaattaaaagaccgaagcaatactacctaaatagttaagggaccaaaaa 49222048  T
Q  110 tataattt 117  Q
    || |||||    
T  49222047 tacaattt 49222040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 13866961 - 13867039
Alignment:
Q  33 aatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaat 110  Q
    ||||||||||| ||||||||||| ||||||| ||| |||| ||||  |||||| | |||||||||||||||||||||||    
T  13866961 aatttaagggaccaaaataaatcaaattttagttaggggaccaaaccgatactaattaaatagttaagggaccaaaaat 13867039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 29248583 - 29248693
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||| ||||||| | |||||| |||||||| ||||||| ||| |||||||||||| |||  ||||  |||||| |||||||||||||||| || |||    
T  29248583 gaccaaattgtgtaacggagagaagttaagggaccaaaatagatcaaattttaattaaaggactaaagtaatactatctaaatagttaagggagcataaa 29248682  T
Q  110 tataatttaat 120  Q
    || ||||||||    
T  29248683 tacaatttaat 29248693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 77
Target Start/End: Complemental strand, 35753543 - 35753477
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaa 77  Q
    ||||||||||||| | | |||||| |||||||| |||||||||||||||||||||||||||| ||||    
T  35753543 gaccaaaatgtgtcacgtagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaa 35753477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 49529117 - 49529195
Alignment:
Q  33 aatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaat 110  Q
    ||||||||||| ||||||||||| ||||||| ||| |||| ||||  |||||| | |||||||||||||||||||||||    
T  49529117 aatttaagggaccaaaataaatcaaattttagttaggggaccaaaccgatactaattaaatagttaagggaccaaaaat 49529195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 51311827 - 51311901
Alignment:
Q  45 caaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaatataattta 118  Q
    ||||||||||| |||||||||||||||| ||||| |||||| | |||||||||||  |||||||||| |||||||    
T  51311827 caaaataaatcaaattttaattaagggaccaaagcgatactaattaaatagttaacagaccaaaaatgtaattta 51311901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 98
Target Start/End: Complemental strand, 27254092 - 27254007
Alignment:
Q  15 caaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    |||||||||||| | |||||| |||||| | ||||||||||| |||||||||||||||| ||||| ||||||  ||||||||||||    
T  27254092 caaaatgtgtaacggagagaagttaaggaaccaaaataaatcaaattttaattaagggaccaaagcgatactgcctaaatagttaa 27254007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 53678555 - 53678430
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | || |||||||||||| | |||||| |||||  |  |||||||||| |||||||||||| ||| ||||| |||||||  |||||| ||||    
T  53678555 ctaacggaaatgatcaaaatgtgtaacggagagaagttaagatactaaaataaatcaaattttaattaaaggaccaaagcgatactatttaaataattaa 53678456  T
Q  99 gggaccaaaaatataatttaatcaat 124  Q
    |||||||||||  |||||||| ||||    
T  53678455 gggaccaaaaacgtaatttaaccaat 53678430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 17102493 - 17102433
Alignment:
Q  14 ccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaa 73  Q
    ||||||| ||||| || ||||| |||||||| |||||||||||||||||||||||||||||    
T  17102493 ccaaaatatgtaacagggagaagttaagggaccaaaataaatcgaattttaattaagggaa 17102433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 77
Target Start/End: Original strand, 22444459 - 22444527
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaa 77  Q
    ||||||||||| ||||| |||||||| |||||| | | |||||||||||||||||||||||||| ||||    
T  22444459 aggaccaaaatatgtaacagagagaagttaaggaaccgaaataaatcgaattttaattaagggaccaaa 22444527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 47891777 - 47891897
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    |||||||| ||||||||||||||||| |||||||  |||||    ||||||||||  |||||||||||||||| |||||  ||||| | |||||||||||    
T  47891777 ctaacggaaaggaccaaaatgtgtaaggagagaaagttaagatgccaaaataaattaaattttaattaagggaccaaagcaatactaattaaatagttaa 47891876  T
Q  99 gggaccaaaaatataatttaa 119  Q
     ||| |||||||  |||||||    
T  47891877 aggaacaaaaatggaatttaa 47891897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 108
Target Start/End: Complemental strand, 52705548 - 52705472
Alignment:
Q  33 aatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaa 108  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||||   ||||| | ||||||||||||||| |||||    
T  52705548 aatttaagggatcaaaataaatcaaattttagttaagggatcaaaccaatactaattaaatagttaagggatcaaaa 52705472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 87
Target Start/End: Original strand, 53310001 - 53310073
Alignment:
Q  16 aaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac 87  Q
    ||||||||||| | |||||| |||||||| ||||||||||| ||||||||||||| || ||||| ||||||||    
T  53310001 aaaatgtgtaatggagagaagttaagggaccaaaataaatcaaattttaattaagagaccaaagtgatactac 53310073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 119
Target Start/End: Complemental strand, 2829484 - 2829409
Alignment:
Q  45 caaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaatataatttaa 119  Q
    ||||||||||| ||| ||||||||| || ||||   ||||||| |||||||||||||||||||||||| |||||||    
T  2829484 caaaataaatcaaatgttaattaagagaccaaaacaatactacctaaatagttaagggaccaaaaatacaatttaa 2829409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 29248432 - 29248369
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaaggga 72  Q
    ||||||||||||||||| |||||||| |||||| | ||||||||||  ||||||||||||||||    
T  29248432 aggaccaaaatgtgtaacagagagaagttaaggaaccaaaataaattaaattttaattaaggga 29248369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 51885673 - 51885748
Alignment:
Q  45 caaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaagggaccaaaaatataatttaa 119  Q
    ||||||||||| |||||||||||| ||| ||||  |||| || | ||||||||||||||||||||| |||||||||    
T  51885673 caaaataaatcaaattttaattaaaggaccaaaacgatattaattaaatagttaagggaccaaaaacataatttaa 51885748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 52268380 - 52268478
Alignment:
Q  13 accaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaat 110  Q
    |||||||||||||| || ||||| |||| | | |||||||||| ||||||||||||| ||| ||||  |||||| ||||||||||||| |||||||||||    
T  52268380 accaaaatgtgtaacgaagagaagttaaag-accaaaataaattgaattttaattaaaggaccaaaacgatactaactaaatagttaatggaccaaaaat 52268478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 53841148 - 53841065
Alignment:
Q  2 taacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatac 84  Q
    ||||||| |||| ||||||||| || ||||| || |||||||| |||||||||| |||||||||||||| || ||||| |||||    
T  53841148 taacggaaaggatcaaaatgtgcaacagagataagttaagggaccaaaataaattgaattttaattaagcgaccaaagcgatac 53841065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 5348877 - 5348951
Alignment:
Q  45 caaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaatataattta 118  Q
    ||||||||||| ||||||||||| |||| ||||| |||||| | ||||||||||| |||| ||||| ||||||||    
T  5348877 caaaataaatcaaattttaattacgggaccaaagcgatactaattaaatagttaaaggacaaaaaacataattta 5348951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 21918573 - 21918499
Alignment:
Q  46 aaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaagggaccaaaaatataatttaa 119  Q
    |||| ||||| |||||||||| ||||| ||||| ||||||| | ||||||||||||||||||||||  |||||||    
T  21918573 aaaaaaaatcaaattttaatttagggaccaaagtgatactaattaaatagttaagggaccaaaaatgcaatttaa 21918499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 43844362 - 43844482
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaa-tttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactact-aaatagtta 97  Q
    |||||||| | ||||||||||||||| | |||||| ||||| |||  |||||||||| | ||||| ||| |||| ||||  ||||||| | |||||||||    
T  43844362 ctaacggaaatgaccaaaatgtgtaacggagagaaatttaaaggacaaaaataaatcaatttttagttaggggaccaaaccgatactaattaaatagtta 43844461  T
Q  98 agggaccaaaaatataattta 118  Q
    | |||||||||| ||||||||    
T  43844462 aaggaccaaaaaaataattta 43844482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 102
Target Start/End: Complemental strand, 51883970 - 51883878
Alignment:
Q  12 gaccaaaatgtgtaaagagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaaggga 102  Q
    |||||||||||||||  ||||||  |||||  | ||||||||||  |||||||||||||||| ||||| |||||| | |||||||||||||||    
T  51883970 gaccaaaatgtgtaagaagagaaagttaagataccaaaataaattaaattttaattaagggaccaaagcgatactaattaaatagttaaggga 51883878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 54247362 - 54247290
Alignment:
Q  31 agaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaaggga 102  Q
    |||| |||||||| ||||||||||| ||||||||| || ||| ||||| |||||||  |||||||||||||||    
T  54247362 agaagttaagggaccaaaataaatcaaattttaatcaatggaccaaagcgatactatttaaatagttaaggga 54247290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 2078605 - 2078484
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactact---aaatagtt 96  Q
    |||| ||| |||||||||||||||||  ||||||  |||||  ||||||||||||| ||||||| |||||||| || || ||||||| |   | ||||||    
T  2078605 ctaatggaaaggaccaaaatgtgtaagaagagaaagttaagatatcaaaataaatcaaattttatttaagggaccagagcgatactaattaaatatagtt 2078506  T
Q  97 aagggaccaaaaatataattta 118  Q
    ||||||  ||||| ||||||||    
T  2078505 aagggattaaaaacataattta 2078484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 22444293 - 22444242
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac 87  Q
    |||||||| |||||||||||||||||||||||| ||| ||||  ||||||||    
T  22444293 ttaagggagcaaaataaatcgaattttaattaatggaccaaatcgatactac 22444242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 38911494 - 38911601
Alignment:
Q  13 accaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||||||||| ||||| || |||| | | |||||||||||||||||||||||| ||| ||||   ||| || ||||||| |||| |||| ||||||    
T  38911494 accaaaatgtgtaacagagaaaagttaatgaaccaaaataaatcgaattttaattaaaggaccaaaacaatattacctaaataattaaaggacaaaaaat 38911593  T
Q  111 ataattta 118  Q
    | ||||||    
T  38911594 acaattta 38911601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 7274718 - 7274664
Alignment:
Q  57 aattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaat 110  Q
    ||||||||||||| || ||||| |||||||| |||||| ||||||||||||||||    
T  7274718 aattttaattaagagaccaaagcgatactacctaaatatttaagggaccaaaaat 7274664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 118
Target Start/End: Original strand, 37133488 - 37133598
Alignment:
Q  10 aggaccaaaatgtgtaaagagaga-atttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaagggaccaaa 107  Q
    ||||||||||||||||| |||| | | |||||  | |||||||||||  ||||||| ||||||| ||||   |||||| | ||||| |||| ||||||||    
T  37133488 aggaccaaaatgtgtaaggagatagagttaagataccaaaataaatcatattttaagtaagggaccaaaacaatactaattaaataattaaaggaccaaa 37133587  T
Q  108 aatataattta 118  Q
    |||||||||||    
T  37133588 aatataattta 37133598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 119
Target Start/End: Complemental strand, 40639237 - 40639119
Alignment:
Q  3 aacggataggaccaaaatgtgtaaagagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagg 100  Q
    |||||| | ||||||||| ||||| |||||||  |||||  | ||||||||||| |||||||||||||||| ||||  |||||| | ||||||||||| |    
T  40639237 aacggaaatgaccaaaatttgtaaggagagaaagttaagataccaaaataaatcaaattttaattaagggaccaaaacgatactaattaaatagttaaag 40639138  T
Q  101 gaccaaaaatataatttaa 119  Q
     || ||||||  |||||||    
T  40639137 aactaaaaatgcaatttaa 40639119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 7742896 - 7742828
Alignment:
Q  2 taacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaag 69  Q
    ||||||| | |||||||||||| || ||||||||  |||| || ||||||||||| |||||||||||||    
T  7742896 taacggaaaagaccaaaatgtgcaacagagagaagataagagaacaaaataaatcaaattttaattaag 7742828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43527249 - 43527297
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagagagaatttaagggatcaaaa 49  Q
    |||||||| |||||||||||||||||  |||||| ||||||||| ||||    
T  43527249 ctaacggaaaggaccaaaatgtgtaacaagagaagttaagggatgaaaa 43527297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 72; Significance: 6e-33; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 4582 - 4693
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||| ||| | |||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  4582 ctaacggaaaggaccaaaatctgtgacagagagaagttaagggatcaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaa 4681  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  4682 gggaccaaaaat 4693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 4460 - 4340
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| | ||||||||||||||| | || ||| ||||| || ||||||||||| ||||| |||||||| | ||||| |||| ||| |||||||||||    
T  4460 ctaacggaaatgaccaaaatgtgtaacggagtgaagttaagagaccaaaataaatcaaatttcaattaaggaaccaaagtgatagtacctaaatagttaa 4361  T
Q  99 gggaccaaaaatataatttaa 119  Q
    ||||||||||||  |||||||    
T  4360 gggaccaaaaatgcaatttaa 4340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 6e-33; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 11678966 - 11679085
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| | ||||||||||||||| ||| |||| |||| |||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||    
T  11678966 ctaacggaaatgaccaaaatgtgtaacagatagaagttaaaggatcaaaataaatcgaattttaattaagggaccaaagcgatactacttaaatagttaa 11679065  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||| ||||||    
T  11679066 gggaccaaaaatacaattta 11679085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18731141 - 18731030
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| || || || |||||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  18731141 ctaacggaaaggaccaaaatgtgtaacgaagataagttaagggaccaaaataaatcgaattttaattaagggatcaaagcgatactatctaaatagttaa 18731042  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  18731041 gggaccaaaaat 18731030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 34568705 - 34568586
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||| | ||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  34568705 ctaacgaaaaggaccaaaatgtgtaacgaagagaagttaagggatcaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaa 34568606  T
Q  99 gggaccaaaaatataattta 118  Q
     |||| ||||||| ||||||    
T  34568605 aggacaaaaaatacaattta 34568586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 8769546 - 8769657
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| |||||||  |||||||| ||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  8769546 ctaacggaaaggaccaaaatgtgtaacagagagatgttaagggaccaaaataaatcaaattttaattaagggaccaaagcgatactacctaaatagttaa 8769645  T
Q  99 gggaccaaaaat 110  Q
    ||||| ||||||    
T  8769646 gggactaaaaat 8769657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 23472820 - 23472931
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| |||||||| |||||||||||||||||||||||||||| ||||| || |||| ||||||||||||    
T  23472820 ctaacggaaaagaccaaaatgtgtaataaagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgaaactacctaaatagttaa 23472919  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  23472920 gggaccaaaaat 23472931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 8769404 - 8769284
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| | |||||| |||||||||||||||||||| |||||||||| ||||| ||||   |||||| ||||||||||||    
T  8769404 ctaacggaaaggaccaaaatgtgtaacggagagaagttaagggatcaaaataaatcaaattttaattcagggaccaaaacaatactacctaaatagttaa 8769305  T
Q  99 gggaccaaaaatataatttaa 119  Q
    ||||||||||||  |||||||    
T  8769304 gggaccaaaaatgcaatttaa 8769284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 10625348 - 10625459
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    ||||| || ||||||||||||||||| |||||||| |||||||| ||||||||||||||||||| |||| ||| ||||  ||||||| ||||||||||||    
T  10625348 ctaacagaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttagttaaaggaccaaaatgatactacctaaatagttaa 10625447  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  10625448 gggaccaaaaat 10625459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 35085861 - 35085750
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    ||||| || |||| |||||||||||| | |||||| |||||||| |||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||||    
T  35085861 ctaactgaaaggatcaaaatgtgtaacaaagagaagttaagggaccaaaataaatcgaattttaattaaaggaccaaagcgatactacctaaatagttaa 35085762  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  35085761 gggaccaaaaat 35085750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 47250810 - 47250921
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||| ||||| | |||||| |||||||| |||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||||    
T  47250810 ctaacggaaatgaccaaaatatgtaacggagagaagttaagggaccaaaataaatcgaattttaattaaaggaccaaagtgatactacctaaatagttaa 47250909  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  47250910 gggaccaaaaat 47250921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 12 - 119
Target Start/End: Complemental strand, 39118121 - 39118012
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| ||| |||| ||| || |||||||||||||||| ||||||||||||| ||||  |||||||| ||||||||||||||||||||||    
T  39118121 gaccaaaatgtgtaacagatagaagttagggaatcaaaataaatcgaaatttaattaagggatcaaaacgatactacctaaatagttaagggaccaaaaa 39118022  T
Q  110 tataatttaa 119  Q
    || |||||||    
T  39118021 tacaatttaa 39118012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 9230941 - 9231053
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| |||||||| ||||| || ||||||||||| ||| |||||||||||| ||||  ||||||| |||||| |||||    
T  9230941 ctaacggaaaggaccaaaatgtgtaacagagagaagttaagtgaccaaaataaatcaaatcttaattaagggaccaaaacgatactacctaaatcgttaa 9231040  T
Q  99 gggaccaaaaata 111  Q
    |||||||||||||    
T  9231041 gggaccaaaaata 9231053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 2357189 - 2357078
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    ||||| || ||||||||||||||||| | |||||| |||||||||||||||||||| |||||||||||||||| ||||| |||||||  |||||||||||    
T  2357189 ctaacagaaaggaccaaaatgtgtaatggagagaagttaagggatcaaaataaatcaaattttaattaagggaccaaagtgatactatttaaatagttaa 2357090  T
Q  99 gggaccaaaaat 110  Q
    | || |||||||    
T  2357089 gagatcaaaaat 2357078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 5238573 - 5238462
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||| ||||||||||| |||||||| |||||||| |||||||||| ||||||||||||||||| ||||| ||||||| ||||| ||||||    
T  5238573 ctaacggaaaggactaaaatgtgtaacagagagaacttaagggaccaaaataaattgaattttaattaagggaccaaagcgatactacctaaacagttaa 5238474  T
Q  99 gggaccaaaaat 110  Q
     ||| |||||||    
T  5238473 tggatcaaaaat 5238462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 9034579 - 9034698
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||| | ||||||||||| ||||| |||| ||| |||||||| ||||||||||| ||||||||||||| || ||||| ||||||| ||||||||||||    
T  9034579 ctaacgaaaaggaccaaaatctgtaacagagggaagttaagggaccaaaataaatcaaattttaattaagagaccaaagcgatactacctaaatagttaa 9034678  T
Q  99 gggaccaaaaatataattta 118  Q
     |||||||||||| ||||||    
T  9034679 aggaccaaaaatacaattta 9034698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 31715755 - 31715636
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||| ||||| ||||| || |||||||| |||||||||||||||||||||||||||  ||||| ||||||| ||||||||||||    
T  31715755 ctaacggaaatgaccaaaatctgtaacagagaaaagttaagggaccaaaataaatcgaattttaattaaggggtcaaagcgatactacctaaatagttaa 31715656  T
Q  99 gggaccaaaaatataattta 118  Q
    | ||| ||||||| ||||||    
T  31715655 gagacaaaaaatacaattta 31715636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 44485596 - 44485707
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| ||||||||||||||||| | |||||| ||||||||||||||||||| |||| |||||||| ||| ||||| |||| ||| |||||||||||    
T  44485596 ctaacggaaaggaccaaaatgtgtaacggagagaagttaagggatcaaaataaattgaatattaattaaaggaccaaagcgataatacttaaatagttaa 44485695  T
Q  99 gggaccaaaaat 110  Q
     |||||||||||    
T  44485696 aggaccaaaaat 44485707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 10 - 118
Target Start/End: Original strand, 2357328 - 2357438
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaa 107  Q
    ||||||||||||||||| |||||||| |||||||| |||||||||| |||||||| |||||||  ||||  |||||||| |||||||||||||||||| |    
T  2357328 aggaccaaaatgtgtaacagagagaagttaagggaccaaaataaattgaattttagttaagggcccaaaacgatactacctaaatagttaagggaccaga 2357427  T
Q  108 aatataattta 118  Q
    |||| ||||||    
T  2357428 aatacaattta 2357438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 31715896 - 31715996
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | |||||| |||  ||| ||||||||||| |||||||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  31715896 gaccaaaatgtgtaacggagagaagttataggaccaaaataaatcaaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaa 31715995  T
Q  110 t 110  Q
    |    
T  31715996 t 31715996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 11678825 - 11678714
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    ||||| || ||||||||||||| ||| || ||||| |||||||| |||||||||||||||||||||||||||| ||||| |||| || ||||||| ||||    
T  11678825 ctaacagaaaggaccaaaatgtataacgaagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagtgatattatctaaatatttaa 11678726  T
Q  99 gggaccaaaaat 110  Q
     |||||||||||    
T  11678725 aggaccaaaaat 11678714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 24119836 - 24119717
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||| ||||| | |||||| |||||||||||||| ||||| ||||||||||||| || ||||| ||||||| ||||||||||||    
T  24119836 ctaacggaaatgaccaaaatttgtaacggagagaagttaagggatcaaaagaaatcaaattttaattaagagaccaaagtgatactatctaaatagttaa 24119737  T
Q  99 gggaccaaaaatataattta 118  Q
    |  ||||||||| |||||||    
T  24119736 gaaaccaaaaatgtaattta 24119717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 28349645 - 28349764
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaag 99  Q
    |||||| | |||||||||||||||||||||| || |||||  | ||||||||||  |||||||||||||||| ||||   ||||| | ||||||||||||    
T  28349645 ctaacgaaaaggaccaaaatgtgtaaagagaaaagttaagataccaaaataaattaaattttaattaagggaccaaaacaatactaattaaatagttaag 28349744  T
Q  100 ggaccaaaaatataatttaa 119  Q
    |||||||||| |||||||||    
T  28349745 ggaccaaaaacataatttaa 28349764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 34568848 - 34568971
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-----taaatag 94  Q
    |||||||| | ||||||||||| ||| |||||||| ||||||||  |||||||||| |||||||||||||||| ||||| ||||||||     |||||||    
T  34568848 ctaacggaaatgaccaaaatgtataacagagagaagttaagggacaaaaataaatcaaattttaattaagggatcaaagtgatactacataaataaatag 34568947  T
Q  95 ttaagggaccaaaaatataattta 118  Q
    | ||| ||||||||||||||||||    
T  34568948 taaagagaccaaaaatataattta 34568971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 48704108 - 48704191
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataattta 118  Q
    |||| ||| |||||||||| ||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||| |||||    
T  48704108 ttaaaggaccaaaataaattgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatatcattta 48704191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 118
Target Start/End: Original strand, 32707004 - 32707114
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||||||||| ||||| |||||||| |||| ||| ||||| ||||||| |||||||||||||| ||||| ||||||| ||||||| ||||||||| |||    
T  32707004 aggaccaaaatatgtaacagagagaagttaatggaccaaaagaaatcgagttttaattaagggaccaaagcgatactatctaaataattaagggactaaa 32707103  T
Q  108 aatataattta 118  Q
    |||| ||||||    
T  32707104 aatacaattta 32707114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 41758801 - 41758691
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| ||||| || |||||||||||||||||||||||||||| ||||  |||||||  |||||||||||    
T  41758801 ctaacggaaatgaccaaaatgtgtaacggagagaagttaagagaccaaaataaatcgaattttaattaagggaccaaaacgatactatttaaatagttaa 41758702  T
Q  99 gggaccaaaaa 109  Q
    ||||| |||||    
T  41758701 gggacaaaaaa 41758691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 47251161 - 47251271
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    |||||||| | ||||||||||||||| |||| || |||||||| ||||||||||  ||||||||||||| || |||||  |||||| |||||||||||||    
T  47251161 ctaacggaaatgaccaaaatgtgtaacgagaaaagttaagggaccaaaataaattaaattttaattaagagaccaaagcaatactacctaaatagttaag 47251260  T
Q  100 ggaccaaaaat 110  Q
    |||| ||||||    
T  47251261 ggacaaaaaat 47251271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 12 - 119
Target Start/End: Complemental strand, 43140809 - 43140700
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||| ||||| |||||| | ||||| || ||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||| |||||    
T  43140809 gaccaaaatatgtaacagagaggagttaagagaccaaaataaatcaaattttaattaagggaccaaagcgatactatctaaatagttaagggactaaaaa 43140710  T
Q  110 tataatttaa 119  Q
    |  |||||||    
T  43140709 tgcaatttaa 43140700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 21522482 - 21522600
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    |||||||| | |||||||||||  |  ||||||| |||||| | ||||||||||| |||||||||||||||| ||||| ||| ||| |||||||||||||    
T  21522482 ctaacggaaatgaccaaaatgttaacggagagaagttaagg-accaaaataaatcaaattttaattaagggaccaaagcgatgctacctaaatagttaag 21522580  T
Q  100 ggaccaaaaatataatttaa 119  Q
    |||||||||| | |||||||    
T  21522581 ggaccaaaaacacaatttaa 21522600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 23437274 - 23437163
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaa-gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||| ||| ||||||||||| |||||  ||||||  |||| ||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  23437274 ctaatggaaaggaccaaaatatgtaaccgagagaggttaaaggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaa 23437175  T
Q  99 gggaccaaaaat 110  Q
    || | |||||||    
T  23437174 ggaatcaaaaat 23437163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 32706854 - 32706743
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaa-gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||| |||||||||||  ||||||| |||||| | |||||||||||||||||||||||||||   |||   |||||| ||||||||||||    
T  32706854 ctaacggaaaggactaaaatgtgtaattgagagaagttaaggaaccaaaataaatcgaattttaattaagggtcaaaaacaatactacctaaatagttaa 32706755  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  32706754 gggaccaaaaat 32706743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 35086004 - 35086115
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| ||| ||||||| ||||| | |||||| |||||||| || |||||||| ||||||| |||||||| ||||| |||||||| |||||||||||    
T  35086004 ctaacggaaaggtccaaaatatgtaacaaagagaagttaagggaccacaataaatcaaattttagttaagggaccaaagcgatactacctaaatagttaa 35086103  T
Q  99 gggaccaaaaat 110  Q
     |||||||||||    
T  35086104 aggaccaaaaat 35086115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 43726506 - 43726617
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| |||||||| |||||||| ||||||||||| |||||||||||||| |  |||   |||| | ||||||||||||    
T  43726506 ctaacggaaatgaccaaaatgtgtaatagagagaagttaagggaccaaaataaatcaaattttaattaaggaactaaaacaataccacctaaatagttaa 43726605  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  43726606 gggaccaaaaat 43726617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 44486196 - 44486307
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    ||||| || ||||||||||| ||||| |||||||| |||||||| ||||||||||  ||| |||||||| ||| ||||| |||||||| |||||||||||    
T  44486196 ctaacagaaaggaccaaaatatgtaacagagagaaattaagggaccaaaataaattaaatattaattaaaggaccaaagcgatactacctaaatagttaa 44486295  T
Q  99 gggaccaaaaat 110  Q
     |||||||||||    
T  44486296 aggaccaaaaat 44486307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 47305249 - 47305130
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    |||||||| | || |||||||||||| |||| ||  |||||  | ||||||||||| |||||||||||||||| ||||| |||||| | |||||||||||    
T  47305249 ctaacggaaatgatcaaaatgtgtaaggagataaagttaagataccaaaataaatcaaattttaattaagggaccaaagcgatactaattaaatagttaa 47305150  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||| ||||||    
T  47305149 gggaccaaaaatacaattta 47305130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 43726351 - 43726246
Alignment:
Q  15 caaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaatat 112  Q
    |||||||||||| |||||||| |||||| | |||| |||||| |||||||||||||||| ||||| || ||||| |||||| |||||||||||||||||     
T  43726351 caaaatgtgtaacagagagaagttaaggaaccaaa-taaatcaaattttaattaagggaccaaagcgagactacttaaataattaagggaccaaaaatac 43726253  T
Q  113 aatttaa 119  Q
    |||||||    
T  43726252 aatttaa 43726246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 44448185 - 44448287
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaa 107  Q
    ||||||||||||||||| ||||| || |||||||| ||||||||||  |||||||||||||||| ||||| |||||||| |||||| |||| |||| |||    
T  44448185 aggaccaaaatgtgtaacagagaaaagttaagggaccaaaataaattaaattttaattaagggaccaaagcgatactacttaaataattaaaggactaaa 44448284  T
Q  108 aat 110  Q
    |||    
T  44448285 aat 44448287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 9230797 - 9230720
Alignment:
Q  2 taacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaag 78  Q
    ||||||| | || |||||||||||| |||||||| |||||||| |||||||||||||||||||||||||||| |||||    
T  9230797 taacggaaatgatcaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaag 9230720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 21522329 - 21522231
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||| ||||| |||||||| ||||| || |||||||||  ||||||||||||||||| ||||| ||||||| ||||||| |||||||||||||||    
T  21522329 gaccaaaatatgtaacagagagaagttaagagaccaaaataaa--gaattttaattaagggaccaaagcgatactacctaaataattaagggaccaaaaa 21522232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 26920192 - 26920265
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatac 84  Q
    ||||||||||||||| | |||||| |||||||| |||||||||||||||||||||||||||| ||||| |||||    
T  26920192 gaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatac 26920265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 47250679 - 47250570
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagag-agaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||| ||||| | | |||| |||||||| |||||||||| ||||||||||||||||| ||||  ||||||| ||||||| ||||    
T  47250679 ctaacggaaaggaccaaaatatgtaatggggagaagttaagggaccaaaataaattgaattttaattaagggaccaaaatgatactacctaaataattaa 47250580  T
Q  99 gggaccaaaa 108  Q
    ||||| ||||    
T  47250579 gggacaaaaa 47250570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 37144027 - 37144147
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    |||||||| | || |||||||||||| |||||||  |||||  | ||||||||||| |||||||||||||||| ||||  |||||| | |||||||||||    
T  37144027 ctaacggaaatgatcaaaatgtgtaaggagagaaaattaagataccaaaataaatcaaattttaattaagggaccaaaacgatactaattaaatagttaa 37144126  T
Q  99 gggaccaaaaatataatttaa 119  Q
    ||||||||||||  |||||||    
T  37144127 gggaccaaaaatgcaatttaa 37144147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 473444 - 473543
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaa-gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| |||||||||||||||||  ||||||| ||||||||  |||||||||| ||||||||||||  || ||||| ||||||| ||||||||||||    
T  473444 ctaacggaaaggaccaaaatgtgtaattgagagaagttaagggacgaaaataaatcaaattttaattaaaagaccaaagcgatactacctaaatagttaa 473543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 37143885 - 37143767
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaa 98  Q
    |||||||| |||| |||||||||||| ||||| || |||||  | |||| |||||| |||||||||||||||| ||||  ||||||| | ||||||||||    
T  37143885 ctaacggaaaggatcaaaatgtgtaacagagaaaagttaagataccaaa-taaatcaaattttaattaagggaccaaaacgatactaattaaatagttaa 37143787  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||| ||||||||    
T  37143786 gggaccaaaaacataattta 37143767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 38842144 - 38842082
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaaggga 72  Q
    ||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||    
T  38842144 aggaccaaaatgtgtaacagagagaagttaagg-atcaaaataaatcgaattttaattaaggga 38842082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 47251020 - 47250942
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagag--agaatttaagggatcaaaataaatcgaattttaattaagggaacaaa 77  Q
    |||||||| ||||||||||||||||| | |  |||| |||||||| |||||||||||||||||||||||||||| ||||    
T  47251020 ctaacggaaaggaccaaaatgtgtaacgggggagaagttaagggaccaaaataaatcgaattttaattaagggaccaaa 47250942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 10625181 - 10625109
Alignment:
Q  47 aaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaatataattta 118  Q
    ||||||||||||||||| |||||||| |||   |||||||| ||||||||||||||||||||||| |||||||    
T  10625181 aaataaatcgaattttagttaagggaccaacacgatactacctaaatagttaagggaccaaaaatgtaattta 10625109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 22338395 - 22338275
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactact-aaatagtta 97  Q
    |||||||| | ||||||||||||||| ||| ||||  |||||  | ||||||||||| |||||||||||||| | |||||  |||||| | |||||||||    
T  22338395 ctaacggaaatgaccaaaatgtgtaacagatagaaagttaagataccaaaataaatcaaattttaattaaggtaccaaagcaatactaattaaatagtta 22338296  T
Q  98 agggaccaaaaatataattta 118  Q
    |||||||||||| ||||||||    
T  22338295 agggaccaaaaacataattta 22338275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 23472704 - 23472596
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaa 109  Q
    ||||||||| ||||| | |||||| |||| | | |||||| |||||||||||||||||  || ||||  |||||||| ||||||||||||||||||||||    
T  23472704 gaccaaaatatgtaacggagagaagttaaagaaccaaaatgaatcgaattttaattaaaagaccaaaacgatactacctaaatagttaagggaccaaaaa 23472605  T
Q  110 tataattta 118  Q
    || ||||||    
T  23472604 tacaattta 23472596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 36507084 - 36507192
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| ||| |||| |||||  | | ||||||||| |||||||||||||||| ||||  |||||| | |||||||||||| |||||||||    
T  36507084 gaccaaaatgtgtaacagaaagaagttaagataccgaaataaatcaaattttaattaagggaccaaatcgatactaattaaatagttaagagaccaaaaa 36507183  T
Q  110 tataattta 118  Q
     ||||||||    
T  36507184 cataattta 36507192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 15326994 - 15326895
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    |||||||| ||||||||||||||||| |||||||  |||||  | ||||||||||| |||||||||||||||| ||||  |||||| | |||||||||||    
T  15326994 ctaacggaaaggaccaaaatgtgtaaggagagaaagttaagataccaaaataaatcaaattttaattaagggaccaaaacgatactaattaaatagttaa 15326895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 473297 - 473203
Alignment:
Q  18 aatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaat 110  Q
    ||||||||| ||||| || |||||| | ||||||||||||||||||| |||||||| ||||| ||||||  ||||||||||||| || |||||||    
T  473297 aatgtgtaacagagaaaagttaaggaaccaaaataaatcgaattttagttaagggaccaaagcgatactgcctaaatagttaagcgatcaaaaat 473203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 118
Target Start/End: Original strand, 38842330 - 38842404
Alignment:
Q  45 caaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataattta 118  Q
    ||||||||||||||||||| |||||||| ||||| ||| ||| |||||||||||||| | |||||||| ||||||    
T  38842330 caaaataaatcgaattttagttaagggaccaaagcgatgctacctaaatagttaaggaatcaaaaatacaattta 38842404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 44448022 - 44447925
Alignment:
Q  14 ccaaaatgtgtaaa-gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||||||||| |||| || |||||||| ||||||||||| |||||||||||| ||| ||||   |||||| |||||||||||| |||||||||||    
T  44448022 ccaaaatgtgtaaaagagaaaagttaagggaccaaaataaatcaaattttaattaa-ggaccaaaacaatactatctaaatagttaacggaccaaaaat 44447925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 38676180 - 38676060
Alignment:
Q  2 taacggataggaccaaaatgtgtaa-agagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagata-ctactaaatagttaa 98  Q
    ||||||| | |||||||| |||||| ||||||||  ||||| || ||||||||||| || |||| |||||||| ||||  || | | | |||||||||||    
T  38676180 taacggaaatgaccaaaacgtgtaacagagagaaagttaagagaccaaaataaatcaaaatttagttaagggaccaaaccgaaatcaattaaatagttaa 38676081  T
Q  99 gggaccaaaaatataatttaa 119  Q
    |||||||||||||||||||||    
T  38676080 gggaccaaaaatataatttaa 38676060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 109
Target Start/End: Original strand, 4156550 - 4156627
Alignment:
Q  33 aatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaa 109  Q
    |||||||| || ||||||||||| ||||||| ||| || | |||| ||||||| | ||||||||||||||||||||||    
T  4156550 aatttaagagaccaaaataaatcaaattttagttagggtaccaaacagatactaattaaatagttaagggaccaaaaa 4156627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 22338585 - 22338651
Alignment:
Q  45 caaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaat 110  Q
    ||||||||||  ||||||||||||||||  |||| |||||| | ||| |||||||||||||||||||    
T  22338585 caaaataaatgaaattttaattaagggacgaaagcgatactaattaattagttaagggaccaaaaat 22338651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23437416 - 23437494
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaag 78  Q
    |||||||  ||||||||||||||||| | ||| || ||| | || ||||||||||| |||||||||||||||| |||||    
T  23437416 ctaacgggaaggaccaaaatgtgtaacaaagataagttacgagaccaaaataaatcaaattttaattaagggaccaaag 23437494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 28263585 - 28263499
Alignment:
Q  33 aatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaatataattta 118  Q
    ||||||||| | ||||||||||| ||||||| ||| |||| ||||  |||||| | ||||||||||||||| ||||||  |||||||    
T  28263585 aatttaaggtaccaaaataaatcaaattttagttaggggaccaaaccgatactaattaaatagttaagggatcaaaaaagtaattta 28263499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 19543555 - 19543503
Alignment:
Q  57 aattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaa 108  Q
    |||||||||||||||| ||||| |||||| | |||||||||||||||| ||||    
T  19543555 aattttaattaagggatcaaagcgatactaaataaatagttaagggacgaaaa 19543503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 6e-33; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 33545086 - 33545205
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| || ||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  33545086 ctaacggaaaggaccaaaatgtgtaacgaagagaagttaagggaccaaaataaatcgaattttaattaagggatcaaagtgatactacctaaatagttaa 33545185  T
Q  99 gggaccaaaaatataattta 118  Q
     | |||||||||||||||||    
T  33545186 tgcaccaaaaatataattta 33545205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 116
Target Start/End: Original strand, 24605151 - 24605254
Alignment:
Q  15 caaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatat 112  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||  ||||||| |||||||||||||||||||||||| |    
T  24605151 caaaatgtgtaacagagagaagttaagggatcaaaataaatcgaattttaattaagggaccaaatcgatactacctaaatagttaagggaccaaaaatgt 24605250  T
Q  113 aatt 116  Q
    ||||    
T  24605251 aatt 24605254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 25551600 - 25551720
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    ||||| || |||||| |||||||||| || ||||| |||||||| ||||||||||||||||||||||| |||| ||||| |||||||| |||||||||||    
T  25551600 ctaacagaaaggacctaaatgtgtaacgaagagaagttaagggaccaaaataaatcgaattttaattaggggaccaaagcgatactacttaaatagttaa 25551699  T
Q  99 gggaccaaaaatataatttaa 119  Q
    ||||||||||||| |||||||    
T  25551700 gggaccaaaaatacaatttaa 25551720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 1860750 - 1860860
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactactaaatagttaag 99  Q
    |||||||| | ||||||||||||||| || ||||| |||||| | | |||||||||||||||||||||||||| |||||||||||  |||||||||||||    
T  1860750 ctaacggaaatgaccaaaatgtgtaacgaagagaagttaaggaacccaaataaatcgaattttaattaagggaccaaagagatacacctaaatagttaag 1860849  T
Q  100 ggaccaaaaat 110  Q
    |||||||||||    
T  1860850 ggaccaaaaat 1860860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 24604996 - 24604877
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | |||||||| |||||| |||||||| | |||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  24604996 ctaacggaaatgaccaaaacgtgtaacagagagaagt-aagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaa 24604898  T
Q  99 gggaccaaaaatataatttaa 119  Q
    ||||||||||||  |||||||    
T  24604897 gggaccaaaaatgcaatttaa 24604877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 33544944 - 33544824
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| | ||||||||||||||| ||| |||| |||| ||| |||||||||||||||||||||||||||| |||||  ||||||| |||||||||||    
T  33544944 ctaacggaaatgaccaaaatgtgtaacagatagaagttaaaggaccaaaataaatcgaattttaattaagggaccaaagcaatactacttaaatagttaa 33544845  T
Q  99 gggaccaaaaatataatttaa 119  Q
    ||||||||||||  |||||||    
T  33544844 gggaccaaaaatgcaatttaa 33544824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3338599 - 3338488
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | || |||||||||||| || ||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  3338599 ctaacggaaatgagcaaaatgtgtaacgaagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaa 3338500  T
Q  99 gggaccaaaaat 110  Q
    ||||| ||||||    
T  3338499 gggacaaaaaat 3338488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 25551469 - 25551350
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| ||||||||||||||||| ||||| || ||||||||  |||||||||| ||||| |||||||||| |||||  ||||||| |||||||||||    
T  25551469 ctaacggaaaggaccaaaatgtgtaacagagaaaagttaagggactaaaataaatcaaatttcaattaagggaccaaagcaatactacctaaatagttaa 25551370  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||| ||||||    
T  25551369 gggaccaaaaatacaattta 25551350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 29010076 - 29009965
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| ||||||||||||||||  | |||||| |||||||| | |||||| ||||||||||||||||||| ||||| |||||||| |||||||||||    
T  29010076 ctaacggaaaggaccaaaatgtgtagcggagagaagttaagggaccgaaataattcgaattttaattaagggaccaaagcgatactacgtaaatagttaa 29009977  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  29009976 gggaccaaaaat 29009965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 1158707 - 1158593
Alignment:
Q  4 acggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaaggg 101  Q
    ||||| |||||||| |||||||| | |||||| |||||||| |||||||||||||||||||||||| ||| ||||| ||||||| |||||||||||| ||    
T  1158707 acggaaaggaccaacatgtgtaacaaagagaagttaagggaccaaaataaatcgaattttaattaaaggaccaaagcgatactacctaaatagttaaagg 1158608  T
Q  102 accaaaaatataatt 116  Q
    ||||||||| |||||    
T  1158607 accaaaaatgtaatt 1158593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 118
Target Start/End: Complemental strand, 9174014 - 9173904
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||||||||||||||| ||| |||| |||| ||| |||||||||||||||||||||||  ||| ||||| ||||||| |||||||||||||||||||||    
T  9174014 aggaccaaaatgtgtaacagaaagaagttaaaggaccaaaataaatcgaattttaattagaggaccaaagcgatactacctaaatagttaagggaccaaa 9173915  T
Q  108 aatataattta 118  Q
    |||| ||||||    
T  9173914 aatacaattta 9173904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 118
Target Start/End: Original strand, 3338750 - 3338858
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| ||| |||| |||| | | |||||||||||||||||||||||||||| ||||  |||||||| ||||||||||||||||||||||    
T  3338750 gaccaaaatgtgtaacagatagaagttaaagaaccaaaataaatcgaattttaattaagggatcaaaacgatactacttaaatagttaagggaccaaaaa 3338849  T
Q  110 tataattta 118  Q
    || ||||||    
T  3338850 taaaattta 3338858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 6220178 - 6220058
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaa 98  Q
    |||||||| ||||||||||||||||| || ||||| |||||||| ||||||||||| ||||||||||||| ||  |||| |||| || | ||||||||||    
T  6220178 ctaacggaaaggaccaaaatgtgtaacagggagaagttaagggaccaaaataaatcaaattttaattaagagacgaaagcgatattaattaaatagttaa 6220079  T
Q  99 gggaccaaaaatataatttaa 119  Q
    ||||||||||||| |||||||    
T  6220078 gggaccaaaaatacaatttaa 6220058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 33329319 - 33329217
Alignment:
Q  10 aggaccaaaatgtgtaaagag-agaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||||||||||||||| | | |||| |||||||| |||||||||||||||||||||||||||| |||||  |||||| |||||||||||||||| ||||    
T  33329319 aggaccaaaatgtgtaacggggagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcaatactacctaaatagttaagggatcaaa 33329220  T
Q  108 aat 110  Q
    |||    
T  33329219 aat 33329217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 33346599 - 33346501
Alignment:
Q  2 taacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    ||||||| |||| |||||||||||| | |||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  33346599 taacggaaaggatcaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaa 33346501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 12 - 119
Target Start/End: Complemental strand, 31029635 - 31029526
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | |||||| |||||||| |||||||||| ||||||||||||||||| ||||| ||||||| ||||||| |||||||| ||||||    
T  31029635 gaccaaaatgtgtaacgcagagaagttaagggaccaaaataaattgaattttaattaagggaccaaagcgatactacctaaataattaagggatcaaaaa 31029536  T
Q  110 tataatttaa 119  Q
    |  |||||||    
T  31029535 tgcaatttaa 31029526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 32283134 - 32283029
Alignment:
Q  15 caaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaagggaccaaaaatat 112  Q
    |||||||||||| | |||||| |||||  | ||||||||||| |||||||||||||||| ||||| ||||||| | ||||||||||||||||||||||||    
T  32283134 caaaatgtgtaacggagagaagttaagataccaaaataaatcaaattttaattaagggaccaaagtgatactaattaaatagttaagggaccaaaaatat 32283035  T
Q  113 aattta 118  Q
    ||||||    
T  32283034 aattta 32283029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 11524878 - 11524778
Alignment:
Q  10 aggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||| ||||||||||| | |||||  |||||||| |||||||||| ||||||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  11524878 aggactaaaatgtgtaacggagagaggttaagggaccaaaataaattgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaa 11524779  T
Q  108 a 108  Q
    |    
T  11524778 a 11524778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3289052 - 3288941
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    ||||| || |||| |||||||||||| | |||||| ||| |||| ||||||||||||||||||| |||||||| ||||| ||||||| ||||||||||||    
T  3289052 ctaacagaaaggatcaaaatgtgtaatggagagaagttaggggaccaaaataaatcgaattttagttaagggaccaaagcgatactacctaaatagttaa 3288953  T
Q  99 gggaccaaaaat 110  Q
    ||||||| ||||    
T  3288952 gggaccataaat 3288941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 6220320 - 6220423
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| | |||||| |||||||| ||||||||||| |||||||||| | ||| ||||| ||||||| ||||||||||||    
T  6220320 ctaacggaaaggaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcaaattttaattgatggaccaaagcgatactacctaaatagttaa 6220419  T
Q  99 ggga 102  Q
    ||||    
T  6220420 ggga 6220423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 11524791 - 11524708
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataattta 118  Q
    |||||||| |||||||||| ||||||||||||||||| ||||| ||||||| |||||||||||| |||||||||||| ||||||    
T  11524791 ttaagggaccaaaataaattgaattttaattaagggaccaaagcgatactacctaaatagttaaaggaccaaaaatacaattta 11524708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 12903343 - 12903224
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | ||| || |||||||| |||||||||| ||||||||||||||||| ||||| ||||||| ||||||| ||||    
T  12903343 ctaacggaaatgaccaaaatgtgtaatggagataagttaagggaccaaaataaattgaattttaattaagggaccaaagcgatactatctaaataattaa 12903244  T
Q  99 gggaccaaaaatataattta 118  Q
     | |||||||||| ||||||    
T  12903243 agaaccaaaaatacaattta 12903224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 102
Target Start/End: Original strand, 14337167 - 14337269
Alignment:
Q  2 taacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    ||||||| | ||||||||||||||| | | ||||||||||||| ||||||||||| |||||||| ||||||| ||||| ||||||| |||||||||||||    
T  14337167 taacggaaaagaccaaaatgtgtaacggaaagaatttaagggaccaaaataaatcaaattttaactaagggaccaaagtgatactacctaaatagttaag 14337266  T
Q  100 gga 102  Q
    |||    
T  14337267 gga 14337269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 35119084 - 35119174
Alignment:
Q  10 aggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    ||||||||||||||||| | |||||| |||| ||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  35119084 aggaccaaaatgtgtaacggagagaaattaatggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaa 35119174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 46 - 118
Target Start/End: Complemental strand, 13155915 - 13155842
Alignment:
Q  46 aaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataattta 118  Q
    ||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||| ||||||||||||||||||    
T  13155915 aaaataaatcgaattttaattaagggaccaaaacgatactacctaaatagttaagagaccaaaaatataattta 13155842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 46 - 118
Target Start/End: Complemental strand, 13160771 - 13160698
Alignment:
Q  46 aaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataattta 118  Q
    ||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||| ||||||||||||||||||    
T  13160771 aaaataaatcgaattttaattaagggaccaaaacgatactacctaaatagttaagagaccaaaaatataattta 13160698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 13156103 - 13156218
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||| ||||| || || || ||||||||||||||||||||||||||||||||||||| ||     |||||| ||||||||||||    
T  13156103 ctaacggaaatgaccaaaatatgtaacgaagaaaaattaagggatcaaaataaatcgaattttaattaagggacca-----atactacctaaatagttaa 13156197  T
Q  99 gggaccaaaaatataatttaa 119  Q
    ||||| |||||| ||||||||    
T  13156198 gggacaaaaaatgtaatttaa 13156218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 13160959 - 13161074
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||| ||||| || || || ||||||||||||||||||||||||||||||||||||| ||     |||||| ||||||||||||    
T  13160959 ctaacggaaatgaccaaaatatgtaacgaagaaaaattaagggatcaaaataaatcgaattttaattaagggacca-----atactacctaaatagttaa 13161053  T
Q  99 gggaccaaaaatataatttaa 119  Q
    ||||| |||||| ||||||||    
T  13161054 gggacaaaaaatgtaatttaa 13161074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 3289186 - 3289285
Alignment:
Q  13 accaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||||||||| | |||||| |||||||| ||||||||||| |||||||||||||| | ||||| |||| || |||||||||| |||||||||||||    
T  3289186 accaaaatgtgtaacggagagaagttaagggaccaaaataaatcaaattttaattaaggcaccaaagcgatattacctaaatagtttagggaccaaaaat 3289285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 14337024 - 14336913
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||| ||| | |||||| |||| ||| |||||||||||||||||||||||| ||| ||||| ||||||| ||||||| ||||    
T  14337024 ctaacggaaaagaccaaaatgtataacaaagagaagttaaaggaccaaaataaatcgaattttaattaaaggaccaaagcgatactagctaaataattaa 14336925  T
Q  99 gggaccaaaaat 110  Q
    |||| |||||||    
T  14336924 gggatcaaaaat 14336913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 35132723 - 35132612
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    ||||| || |||| ||||||||| || |||||||| |||| ||| ||||||||||| ||||||||||| |||| ||||| ||||||| ||||||||||||    
T  35132723 ctaacagaaaggatcaaaatgtgcaacagagagaagttaaaggaccaaaataaatctaattttaattatgggaccaaagcgatactacctaaatagttaa 35132624  T
Q  99 gggaccaaaaat 110  Q
     |||||||||||    
T  35132623 tggaccaaaaat 35132612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 7537869 - 7537979
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaa-gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    ||||| || |||||||||||||||||  ||||||| ||| |||| ||||||||||| ||||||||||||||||  |||| ||||| || |||||||||||    
T  7537869 ctaacagaaaggaccaaaatgtgtaaccgagagaagttatgggaccaaaataaatcaaattttaattaagggacaaaagcgataccacttaaatagttaa 7537968  T
Q  99 gggaccaaaaa 109  Q
    ||||| |||||    
T  7537969 gggacaaaaaa 7537979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 2949382 - 2949307
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaat 110  Q
    |||| ||| |||||||||||||||||||||||||||| ||||| |||||||| ||||||||||| |||| ||||||    
T  2949382 ttaatggaccaaaataaatcgaattttaattaagggaccaaagtgatactacttaaatagttaacggacaaaaaat 2949307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19135710 - 19135821
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||| ||| |||||||| |||||||| | |||||| ||||| || ||||||||||||||||||||||||| || ||||  ||||||| ||||||| ||||    
T  19135710 ctaatggaaaggaccaacatgtgtaacggagagaagttaagagaccaaaataaatcgaattttaattaagagatcaaaacgatactacctaaatacttaa 19135809  T
Q  99 gggaccaaaaat 110  Q
     |||||||||||    
T  19135810 tggaccaaaaat 19135821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 2814575 - 2814693
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    |||||||| || | |||||||||||| |||||||| |||||  | ||||||||||| |||||||||||| | | ||||| |||||| | |||||||||||    
T  2814575 ctaacggaaagaatcaaaatgtgtaacagagagaagttaagaaaccaaaataaatcaaattttaattaaagaaccaaagcgatactaattaaatagttaa 2814674  T
Q  99 gggaccaaaaatataattt 117  Q
    | ||||||||| |||||||    
T  2814675 gagaccaaaaacataattt 2814693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 11525030 - 11525140
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    |||||||| | |||||||||||||||  ||  || ||||| || |||||||||| ||||||||| ||||||| ||||  ||||||| |||||| ||||||    
T  11525030 ctaacggaaatgaccaaaatgtgtaacaaggaaagttaagagaccaaaataaattgaattttaaataagggaccaaaccgatactacctaaattgttaag 11525129  T
Q  100 ggaccaaaaat 110  Q
    |||||||||||    
T  11525130 ggaccaaaaat 11525140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 24548505 - 24548615
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    |||||| | |||||||||||||||||   |||||| |||||  | ||||||||||| |||||||||||| ||| ||||| |||||| | |||||||||||    
T  24548505 ctaacgaaaaggaccaaaatgtgtaactcagagaagttaagataccaaaataaatcaaattttaattaaaggaccaaagtgatactaattaaatagttaa 24548604  T
Q  99 gggaccaaaaa 109  Q
    |||||||||||    
T  24548605 gggaccaaaaa 24548615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 33972470 - 33972547
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaa 77  Q
    |||||||| | ||||||||||||||| | |||||| |||||||| |||||||||| ||||||||||||||||| ||||    
T  33972470 ctaacggaaatgaccaaaatgtgtaacggagagaagttaagggaccaaaataaattgaattttaattaagggaccaaa 33972547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 77
Target Start/End: Original strand, 2949564 - 2949632
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaa 77  Q
    ||||||||||||||||| |||||||| ||||| || ||||||||||| |||||||||||||||| ||||    
T  2949564 aggaccaaaatgtgtaacagagagaagttaagagaccaaaataaatcaaattttaattaagggaccaaa 2949632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 1158890 - 1158964
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaat 110  Q
    |||||||| ||||||||||| ||||| |||||||||| ||||| |||||||| ||||||||||||| |||||||||    
T  1158890 ttaagggaccaaaataaatcaaattt-aattaagggaccaaagcgatactacttaaatagttaaggtaccaaaaat 1158964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 2315701 - 2315592
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    |||||||| ||||||||||| ||||| |||||||  |||||  | ||||||||||| ||||||||||||| || ||||| |||||| | |||||||||||    
T  2315701 ctaacggaaaggaccaaaatatgtaaggagagaaagttaagataccaaaataaatcaaattttaattaagcgaccaaagcgatactaattaaatagttaa 2315602  T
Q  99 gggaccaaaa 108  Q
    |  |||||||    
T  2315601 gaaaccaaaa 2315592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 29010228 - 29010329
Alignment:
Q  11 ggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaa 108  Q
    |||||||||||||||| | |  ||| |||||||  ||||||||||||||||||| |||||||| || || |||||||| |||||||| |||| |||||||    
T  29010228 ggaccaaaatgtgtaatggatggaagttaaggggccaaaataaatcgaattttagttaagggaccacagcgatactacataaatagtcaaggaaccaaaa 29010327  T
Q  109 at 110  Q
    ||    
T  29010328 at 29010329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 33548156 - 33548232
Alignment:
Q  34 atttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    ||||||| ||||||||||| || |||||||||||||||  ||||| ||||||| ||||||||||||||||| ||||||    
T  33548156 atttaagagatcaaaataa-tcaaattttaattaaggggccaaagcgatactacctaaatagttaagggactaaaaat 33548232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 12903503 - 12903562
Alignment:
Q  28 gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac 87  Q
    ||||||| |||||| |||||||||| ||||||||||||||| ||| ||||| ||||||||    
T  12903503 gagagaagttaaggaatcaaaataattcgaattttaattaaaggaccaaagggatactac 12903562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 24548363 - 24548252
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagagagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaa 98  Q
    |||||| | ||||||||||||||||| |||||||  |||||  | ||||||||||| |||||||| |||||    |||| ||||||| | ||||||||||    
T  24548363 ctaacgaaaaggaccaaaatgtgtaaggagagaaagttaagataccaaaataaatcaaattttaactaaggctcaaaagcgatactaattaaatagttaa 24548264  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  24548263 gggaccaaaaat 24548252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 17245621 - 17245699
Alignment:
Q  33 aatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaat 110  Q
    ||||||||||| ||||||||||| ||||||| ||| |||| ||||  |||||| | |||||| ||||||||||||||||    
T  17245621 aatttaagggaccaaaataaatcaaattttagttaggggaccaaaccgatactaattaaataattaagggaccaaaaat 17245699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 109
Target Start/End: Original strand, 6229684 - 6229760
Alignment:
Q  33 aatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaa 109  Q
    ||||||||||| ||||||||||| ||||||| || ||||| ||||  |||||| | ||||||||||||||||||||||    
T  6229684 aatttaagggaccaaaataaatcaaattttagtt-agggaccaaaccgatactaattaaatagttaagggaccaaaaa 6229760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 118
Target Start/End: Original strand, 29999676 - 29999786
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaa 107  Q
    ||||| ||||||||||| ||| |||| |||||  | ||||||||||| ||||||||||| ||||  |||| |||||| | |||||||||||| || |||     
T  29999676 aggactaaaatgtgtaacagatagaagttaagataccaaaataaatcaaattttaattacgggactaaagcgatactaattaaatagttaagagatcaat 29999775  T
Q  108 aatataattta 118  Q
    || ||||||||    
T  29999776 aacataattta 29999786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 15 - 110
Target Start/End: Original strand, 31029802 - 31029899
Alignment:
Q  15 caaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||||||| ||||| ||  ||| ||| ||||||||||||||||||| ||||||||  |||   ||||||  ||||| |||||||||||||||||    
T  31029802 caaaatgtgtaacagagaaaagataaaggaccaaaataaatcgaattttagttaagggactaaaacaatactatttaaatggttaagggaccaaaaat 31029899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 17544762 - 17544826
Alignment:
Q  45 caaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaa 108  Q
    ||||||||||| |||||||||||||||| ||||| |||| || | ||||||||| ||||| ||||    
T  17544762 caaaataaatcaaattttaattaagggaccaaagtgatattagcaaaatagttacgggacaaaaa 17544826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 35132917 - 35132973
Alignment:
Q  63 aattaagggaacaaagagatactac-taaatagttaagggaccaaaaatataattta 118  Q
    |||||||||| ||||| | |||||| ||||||||||||||||| |||||| ||||||    
T  35132917 aattaagggaccaaagcggtactacctaaatagttaagggaccgaaaatacaattta 35132973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 6e-30; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 7399190 - 7399088
Alignment:
Q  10 aggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||||||||||||||| | |||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  7399190 aggaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaa 7399091  T
Q  108 aat 110  Q
    |||    
T  7399090 aat 7399088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 12593720 - 12593840
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||| ||| |||||  |||||| ||||||||||||    
T  12593720 ctaacggaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaaaggaccaaagcaatactacctaaatagttaa 12593819  T
Q  99 gggaccaaaaatataatttaa 119  Q
     |||| |||||| ||||||||    
T  12593820 aggactaaaaatgtaatttaa 12593840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 19205207 - 19205327
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| | |||||| ||||||| |||||||||||||||||||| |||||||| ||||| ||||||| ||||||||||||    
T  19205207 ctaacggaaaggaccaaaatgtgtaacggagagaagttaaggggtcaaaataaatcgaattttagttaagggaccaaagcgatactacctaaatagttaa 19205306  T
Q  99 gggaccaaaaatataatttaa 119  Q
    |||| |||||||  |||||||    
T  19205307 gggatcaaaaatgcaatttaa 19205327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 41859941 - 41860063
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta---ctaaatagtt 96  Q
    |||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||| ||||||||||||||||| ||||| |||||||   ||||||||||    
T  41859941 ctaacggaaaggaccaaaatgtgtaacagaaagaagttaagggatcaaaataaattgaattttaattaagggaccaaagtgatactatacctaaatagtt 41860040  T
Q  97 aagggaccaaaaatataatttaa 119  Q
    ||| ||||||||||  |||||||    
T  41860041 aagagaccaaaaatgcaatttaa 41860063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 31656469 - 31656370
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||  |||||||| |||| |||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  31656469 gaccaaaatgtgtatcagagagaagttaaaggatcaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaa 31656370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 42710614 - 42710733
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||| | ||| | |||||| |||||||||||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||    
T  42710614 ctaacggaaatgaccaaaatttataacaaagagaagttaagggatcaaaataaatcaaattttaattaagggaccaaagcgatactacctaaatagttaa 42710713  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||| ||||||    
T  42710714 gggaccaaaaatacaattta 42710733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 7399342 - 7399452
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||| ||||| ||||||| ||||||| ||||    
T  7399342 ctaacggaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagcgatactacctaaataattaa 7399441  T
Q  99 gggaccaaaaa 109  Q
    ||||| |||||    
T  7399442 gggacaaaaaa 7399452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 12 - 119
Target Start/End: Complemental strand, 15476377 - 15476268
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | |||||| ||||| || ||||||||||  |||||||||||||||| ||||| |||||||| ||||||||||||||||||||||    
T  15476377 gaccaaaatgtgtaacggagagaagttaagagaccaaaataaataaaattttaattaagggatcaaagcgatactacctaaatagttaagggaccaaaaa 15476278  T
Q  110 tataatttaa 119  Q
    ||||||||||    
T  15476277 tataatttaa 15476268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 15 - 110
Target Start/End: Original strand, 33763186 - 33763282
Alignment:
Q  15 caaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactactaaatagttaagggaccaaaaat 110  Q
    |||||||||||| | |||||| |||||||| | |||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||    
T  33763186 caaaatgtgtaacggagagaagttaagggaccgaaataaatcgaattttaattaaggaaccaaagcgatactactaaatagttaagggaccaaaaat 33763282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 8418460 - 8418559
Alignment:
Q  13 accaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||||| ||| ||||| || ||||||||||||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||||||||||||||||    
T  8418460 accaaaatgtataacagagaaaagttaagggatcaaaataaatcgaattttaattaacggaccaaagcgatactacctaaatagttaagggaccaaaaat 8418559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 9693040 - 9692922
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| | |||||| |||||||||||||||||||||||||||| ||||| ||||||| |||||||||| |    
T  9693040 ctaacggaaatgaccaaaatgtgtaacggagagaagtcaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagtt-a 9692942  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||| ||||||    
T  9692941 gggaccaaaaatacaattta 9692922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 31656622 - 31656741
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaa 98  Q
    |||||||| || |||||||||||||| |||||||| ||| |||| |||||||||||||||||||||||||||| ||||| ||||||  ||||  ||||||    
T  31656622 ctaacggaaagaaccaaaatgtgtaacagagagaagttatgggaccaaaataaatcgaattttaattaagggaccaaagcgatactgcctaataagttaa 31656721  T
Q  99 gggaccaaaaatataattta 118  Q
    |||||||||||| |||||||    
T  31656722 gggaccaaaaatgtaattta 31656741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 35263758 - 35263869
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| | ||||||||||| ||| ||||||||||||||||||| |||||||| |||||  |||||| ||||||| ||||    
T  35263758 ctaacggaaaggaccaaaatgtgtaacaaagagaatttaatggaccaaaataaatcgaattttagttaagggaccaaagtcatactacctaaataattaa 35263857  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  35263858 gggaccaaaaat 35263869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 334409 - 334307
Alignment:
Q  10 aggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||||||||||||||||| |||||| |||||||| ||||||||||| |||||||||||||||| ||||| ||||||| |||||||||||| |||| |||    
T  334409 aggaccaaaatgtgtaaaggagagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagtgatactacctaaatagttaaaggactaaa 334310  T
Q  108 aat 110  Q
    |||    
T  334309 aat 334307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 125
Target Start/End: Complemental strand, 5624473 - 5624375
Alignment:
Q  28 gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataatttaatcaatt 125  Q
    ||||||| |||||||| ||||||||||| |||||||||||||||| ||||  ||||||| ||||||||||||| ||||||||||| |||||||||||||    
T  5624473 gagagaagttaagggaccaaaataaatcaaattttaattaagggaccaaaacgatactacctaaatagttaagagaccaaaaatacaatttaatcaatt 5624375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 16353427 - 16353529
Alignment:
Q  10 aggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaa 107  Q
    ||||||||||||||||| || ||||| |||||||| ||||||||||||||||||||||| |||| ||||| |||||||| ||||||||||||||| ||||    
T  16353427 aggaccaaaatgtgtaacgaagagaagttaagggaccaaaataaatcgaattttaattaggggaccaaagcgatactacttaaatagttaagggatcaaa 16353526  T
Q  108 aat 110  Q
    |||    
T  16353527 aat 16353529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 17736522 - 17736620
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaa 108  Q
    |||||| |||||||| |||||||||||||| || |||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||||||||||||||    
T  17736522 gaccaacatgtgtaacagagagaatttaagagaccaaaataaatcgaattttaattaatggaccaaagcgatactacctaaatagttaagggaccaaaa 17736620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 35263615 - 35263505
Alignment:
Q  2 taacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    ||||||| ||||||||||| ||||| | |||||| |||| ||| ||||||||||||||||||| |||||||| ||||| ||||||| |||||||||||||    
T  35263615 taacggaaaggaccaaaatatgtaacaaagagaagttaaaggaccaaaataaatcgaattttagttaagggaccaaagcgatactacctaaatagttaag 35263516  T
Q  100 ggaccaaaaat 110  Q
    |||||||||||    
T  35263515 ggaccaaaaat 35263505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 28392033 - 28392153
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagtta 97  Q
    |||||||| | ||||||||||||||| | ||||||  |||| ||| |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||    
T  28392033 ctaacggaaatgaccaaaatgtgtaacggagagaaggttaatggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagtta 28392132  T
Q  98 agggaccaaaaatataattta 118  Q
    || ||||||||||| ||||||    
T  28392133 agagaccaaaaatagaattta 28392153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 39706326 - 39706426
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | |||||| |||||||| |||||||||||||||||||||||||||| ||||   |||||| |||||||||||||||||||||||    
T  39706326 gaccaaaatgtgtaacggagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaaagaatactacctaaatagttaagggaccaaaaa 39706425  T
Q  110 t 110  Q
    |    
T  39706426 t 39706426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 5087929 - 5087818
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagaga-gaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaa 98  Q
    |||||||| ||||||||||||||||| | || ||| |||||| | |||||||||| |||||||| |||||||| ||||| |||||||| |||||||||||    
T  5087929 ctaacggaaaggaccaaaatgtgtaacgggaagaagttaaggaaccaaaataaattgaattttagttaagggaccaaagcgatactacctaaatagttaa 5087830  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  5087829 gggaccaaaaat 5087818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 7210578 - 7210467
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| |||| |||||||||||| |||||||| |||||||| ||||||||||||||||||||| |||||| ||||  |||| || ||||||| ||||    
T  7210578 ctaacggaaaggatcaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaatcaagggaccaaaacgatagtacctaaatatttaa 7210479  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  7210478 gggaccaaaaat 7210467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 9693182 - 9693293
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| |||||||| |||||||| ||| ||||||||| |||||||||||||| ||||  ||||||| |||||| |||||    
T  9693182 ctaacggaaatgaccaaaatgtgtaacagagagaagttaagggaccaatataaatcgatttttaattaagggaccaaatcgatactacctaaatcgttaa 9693281  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  9693282 gggaccaaaaat 9693293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 33699397 - 33699286
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| |||||||| |||||||| ||||||||| ||||||||| |||| ||| ||||  ||||||| ||||||||||||    
T  33699397 ctaacggaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaaccgaattttagttaaaggaccaaaacgatactacctaaatagttaa 33699298  T
Q  99 gggaccaaaaat 110  Q
    ||||||| ||||    
T  33699297 gggaccataaat 33699286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 36752024 - 36751905
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| || |||||||||| ||| |||||||| ||||||||  |||||||||| |||||||||||||||| ||||  ||||||| ||||||||||||    
T  36752024 ctaacggaaagaaccaaaatgtttaacagagagaagttaagggactaaaataaatcaaattttaattaagggaccaaatcgatactacctaaatagttaa 36751925  T
Q  99 gggaccaaaaatataattta 118  Q
     |||||||||||| ||||||    
T  36751924 aggaccaaaaatacaattta 36751905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 31909052 - 31908931
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaa--atagtt 96  Q
    |||||||| | |||||||||||| || |||||||| |||||||| |||||||||| ||||||||||||||||| ||||| ||||||| ||||  ||||||    
T  31909052 ctaacggaaatgaccaaaatgtgcaatagagagaagttaagggaccaaaataaattgaattttaattaagggatcaaagcgatactacctaaatatagtt 31908953  T
Q  97 aagggaccaaaaatataattta 118  Q
    |||| |||||||||| ||||||    
T  31908952 aaggcaccaaaaatacaattta 31908931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 5152881 - 5152998
Alignment:
Q  3 aacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagg 100  Q
    |||||| | ||||||||||||||| | |||||| |||||  | ||||||||||| |||||||||||||||| ||||| |||||| | |||||||||||||    
T  5152881 aacggaaatgaccaaaatgtgtaacaaagagaaattaagataccaaaataaatcaaattttaattaagggaccaaagcgatactaaataaatagttaagg 5152980  T
Q  101 gaccaaaaatataattta 118  Q
    ||||||||| ||||||||    
T  5152981 gaccaaaaacataattta 5152998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 10656205 - 10656097
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | ||| || |||| ||| ||||||||||| ||||||| |||||||| ||||| |||||||| ||||||||||||||||||||||    
T  10656205 gaccaaaatgtgtaacggagataagttaaaggagcaaaataaatcaaattttagttaagggaccaaagcgatactacctaaatagttaagggaccaaaaa 10656106  T
Q  110 tataattta 118  Q
    || ||||||    
T  10656105 tacaattta 10656097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 3878603 - 3878484
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | || ||||||||| || |||||||| |||| ||| ||||||||||||||||||||||||  || ||||| ||||||| ||||||| ||||    
T  3878603 ctaacggaaatgatcaaaatgtgcaatagagagaagttaaaggaccaaaataaatcgaattttaattaaacgaccaaagcgatactacctaaataattaa 3878504  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||| ||||||    
T  3878503 gggaccaaaaatacaattta 3878484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 5088392 - 5088511
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    ||||| || ||||||||||||||||| | | |||| |||| ||| |||||||||||||||||||||||  ||| ||||| ||||||| ||||||||||||    
T  5088392 ctaacagaaaggaccaaaatgtgtaacaaaaagaagttaaaggaccaaaataaatcgaattttaattagaggaccaaagcgatactacctaaatagttaa 5088491  T
Q  99 gggaccaaaaatataattta 118  Q
    | ||||||||||| ||||||    
T  5088492 gagaccaaaaatacaattta 5088511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 7210709 - 7210816
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| | | |||| ||||  || |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  7210709 ctaacggaaaggaccaaaatgtgtaacataaagaagttaaaagaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaa 7210808  T
Q  99 gggaccaa 106  Q
    | ||||||    
T  7210809 gtgaccaa 7210816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 12694962 - 12695061
Alignment:
Q  13 accaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||||||||| | | |||| |||||||| ||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||| ||||||    
T  12694962 accaaaatgtgtaatggaaagaagttaagggaccaaaataaatcaaattttaattaagggaccaaagtgatactacctaaatagttaagggactaaaaat 12695061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 21750901 - 21750822
Alignment:
Q  31 agaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    |||| |||||||| |||||||||||||||||||||||||||| ||||  ||||||| |||||||||||||||||||||||    
T  21750901 agaagttaagggaccaaaataaatcgaattttaattaagggaccaaaacgatactacctaaatagttaagggaccaaaaa 21750822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 28391882 - 28391779
Alignment:
Q  10 aggaccaaaatgtgtaaag-agagaat-ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaa 106  Q
    ||||||||||||||||| | ||||||  ||||||||||||||||||||||| ||||||||||||| |||||  |||||  ||||||||||||||||||||    
T  28391882 aggaccaaaatgtgtaatggagagaaagttaagggatcaaaataaatcgaactttaattaagggaccaaagtaatactgcctaaatagttaagggaccaa 28391783  T
Q  107 aaat 110  Q
    ||||    
T  28391782 aaat 28391779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 38416398 - 38416517
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| |||| |||||||||||| | | |||| |||||| | ||||||||||||||||||||||||| || ||||| ||||||| ||||||| ||||    
T  38416398 ctaacggaaaggatcaaaatgtgtaacggaaagaagttaaggaaccaaaataaatcgaattttaattaagtgagcaaagcgatactacctaaataattaa 38416497  T
Q  99 gggaccaaaaatataattta 118  Q
    | ||||||||||| ||||||    
T  38416498 gagaccaaaaatacaattta 38416517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 10656367 - 10656469
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaa 107  Q
    ||||||||||||||||| |||||||| ||||||||  |||||||||| ||||||| |||| ||| ||||| |||||||| ||||||||||||||| ||||    
T  10656367 aggaccaaaatgtgtaacagagagaagttaagggactaaaataaatcaaattttacttaaaggaccaaagcgatactacctaaatagttaagggatcaaa 10656466  T
Q  108 aat 110  Q
    |||    
T  10656467 aat 10656469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 15267513 - 15267615
Alignment:
Q  10 aggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||||||||||||||| | |||||| |||| ||| ||||||||||||||||||| |||||||| ||||| ||||||| |||||||||||| ||| ||||    
T  15267513 aggaccaaaatgtgtaacggagagaagttaaaggaccaaaataaatcgaattttagttaagggaccaaagcgatactacctaaatagttaaaggatcaaa 15267612  T
Q  108 aat 110  Q
    |||    
T  15267613 aat 15267615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 32272133 - 32272215
Alignment:
Q  29 agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||| |||||||| |||||||||||||||||||||||||||| ||||| |||| || ||||||||||||| ||||||||||    
T  32272133 agagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatattatctaaatagttaagagaccaaaaat 32272215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 46 - 118
Target Start/End: Complemental strand, 5460264 - 5460191
Alignment:
Q  46 aaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaatataattta 118  Q
    ||||||||||||||||||||||||||| ||||| ||||||  ||||||||||||||||||||||||| ||||||    
T  5460264 aaaataaatcgaattttaattaagggaccaaagcgatactgtctaaatagttaagggaccaaaaatacaattta 5460191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 15476523 - 15476632
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| || ||||| ||||| || ||||||||||| |||||||||||||||| ||||| ||||||| ||||||| ||||    
T  15476523 ctaacggaaaagaccaaaatgtgtaacgaagagaagttaagagaccaaaataaatcaaattttaattaagggaccaaagcgatactacctaaataattaa 15476622  T
Q  99 gggaccaaaa 108  Q
    ||||| ||||    
T  15476623 gggactaaaa 15476632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 41372433 - 41372542
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| |||||||| |||||  | ||||||||||| |||||||||||||||| ||||  |||| || | |||||||||||||||||||||    
T  41372433 gaccaaaatgtgtaatagagagaagttaagataccaaaataaatcaaattttaattaagggaccaaaacgatattaattaaatagttaagggaccaaaaa 41372532  T
Q  110 tataatttaa 119  Q
     |||||||||    
T  41372533 cataatttaa 41372542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 43570049 - 43570154
Alignment:
Q  15 caaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatat 112  Q
    |||||||||||| | |||||| |||| ||  ||||||||||| |||||||||||||||||||||| ||| ||| ||||||||||||||||| |||||||     
T  43570049 caaaatgtgtaacggagagaagttaatgggacaaaataaatcaaattttaattaagggaacaaagcgatgctatctaaatagttaagggacaaaaaatac 43570148  T
Q  113 aattta 118  Q
    ||||||    
T  43570149 aattta 43570154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 18514399 - 18514299
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | |||||| |||||||| |||||||||| ||||||||| |||| || ||||| |||||| | ||||||||||||||||||||||    
T  18514399 gaccaaaatgtgtaacatagagaagttaagggaccaaaataaattgaattttaactaagcgaccaaagggatacttcctaaatagttaagggaccaaaaa 18514300  T
Q  110 t 110  Q
    |    
T  18514299 t 18514299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 28 - 119
Target Start/End: Complemental strand, 25923212 - 25923120
Alignment:
Q  28 gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataatttaa 119  Q
    ||||||| ||||| || |||||||||||||||||||||||| ||| ||||  ||||||| |||||||||||||||| |||||||| |||||||    
T  25923212 gagagaagttaagagaccaaaataaatcgaattttaattaaaggaccaaaccgatactacctaaatagttaagggatcaaaaatacaatttaa 25923120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 26289142 - 26289030
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||| ||||||||| | | | |||| |||| ||| ||||||||||| ||||||||||||||||  |||| ||||||| ||||||||||||    
T  26289142 ctaacggaaaggacgaaaatgtgtgacatatagaagttaaaggaccaaaataaatcaaattttaattaagggacgaaagcgatactacctaaatagttaa 26289043  T
Q  99 gggaccaaaaata 111  Q
    |||||||||||||    
T  26289042 gggaccaaaaata 26289030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 29024055 - 29023948
Alignment:
Q  2 taacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaag 99  Q
    ||||||| | ||||||||| ||||| |||||||| |||||||| |||||   |||||||||||||||||| | ||||| ||||||| |||||||||||||    
T  29024055 taacggaaatgaccaaaatatgtaacagagagaaattaagggaccaaaa---atcgaattttaattaaggaaccaaagcgatactacctaaatagttaag 29023959  T
Q  100 ggaccaaaaat 110  Q
    |||||||||||    
T  29023958 ggaccaaaaat 29023948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 17861160 - 17861042
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaaga-gagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    ||||||||  |||||||||||||||  || ||||| |||||| | |||||||||||||||||||||||||||| |||||  | | || ||||||||||||    
T  17861160 ctaacggaatggaccaaaatgtgtaccgaagagaagttaagg-accaaaataaatcgaattttaattaagggaccaaagcaacattacctaaatagttaa 17861062  T
Q  99 gggaccaaaaatataattta 118  Q
     |||||||||||||||||||    
T  17861061 aggaccaaaaatataattta 17861042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 40589346 - 40589429
Alignment:
Q  28 gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    ||||||| |||| ||| |||||||||||||||||||||||||||| ||||  ||||||| |||||||||||||| |||||||||    
T  40589346 gagagaagttaaaggaccaaaataaatcgaattttaattaagggaccaaaacgatactacctaaatagttaaggaaccaaaaat 40589429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 40589949 - 40590032
Alignment:
Q  28 gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    ||||||| |||| ||| |||||||||||||||||||||||||||| ||||  ||||||| |||||||||||||| |||||||||    
T  40589949 gagagaagttaaaggaccaaaataaatcgaattttaattaagggaccaaaacgatactacctaaatagttaaggaaccaaaaat 40590032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 40774459 - 40774349
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| |||||||| |||||||| |||||||||||| |||||||||||||||  |||   |||||| ||||||||||||    
T  40774459 ctaacggaaatgaccaaaatgtgtaagagagagaagttaagggaccaaaataaatcg-attttaattaagggactaaaacaatactacctaaatagttaa 40774361  T
Q  99 gggaccaaaaat 110  Q
    ||||| ||||||    
T  40774360 gggacaaaaaat 40774349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 119
Target Start/End: Complemental strand, 15267349 - 15267244
Alignment:
Q  15 caaaatgtgtaaa-gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactactaaatagttaagggaccaaaaatata 113  Q
    ||||||||||||  ||||||| |||||||  ||||||||||| |||||||||||| ||| ||||  ||||||||  |||||||||||||||||||||  |    
T  15267349 caaaatgtgtaattgagagaagttaaggggccaaaataaatcaaattttaattaaaggaccaaaacgatactacctaatagttaagggaccaaaaatgca 15267250  T
Q  114 atttaa 119  Q
    ||||||    
T  15267249 atttaa 15267244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 31909205 - 31909314
Alignment:
Q  12 gaccaaaatgtgtaaa-gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||| |||||| || |||| |||||||| ||||||||||| ||||||||||||||||  |||  ||||||| ||||| |||||||||||||||||    
T  31909205 gaccaaaatatgtaaaagatagaagttaagggaccaaaataaatcaaattttaattaagggacgaaaacgatactacctaaacagttaagggaccaaaaa 31909304  T
Q  110 tataatttaa 119  Q
    |  |||||||    
T  31909305 tgcaatttaa 31909314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 40589165 - 40589065
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | |||||| | |||||| ||||||||||||||||||||||  | || ||||| || |||| |||||||||||||||||||||||    
T  40589165 gaccaaaatgtgtaacaaagagaagtcaagggaccaaaataaatcgaattttaatttggagaccaaagtgaaactacctaaatagttaagggaccaaaaa 40589066  T
Q  110 t 110  Q
    |    
T  40589065 t 40589065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 40589768 - 40589668
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | |||||| | |||||| ||||||||||||||||||||||  | || ||||| || |||| |||||||||||||||||||||||    
T  40589768 gaccaaaatgtgtaacaaagagaagtcaagggaccaaaataaatcgaattttaatttggagaccaaagtgaaactacctaaatagttaagggaccaaaaa 40589669  T
Q  110 t 110  Q
    |    
T  40589668 t 40589668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 119
Target Start/End: Original strand, 15670424 - 15670535
Alignment:
Q  10 aggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaa 107  Q
    |||||||| |||||||| | |||||| |||||||| ||||||||||  ||||||||||||   | ||||  |||||||| ||||||||||||||||||||    
T  15670424 aggaccaacatgtgtaatgcagagaagttaagggaccaaaataaataaaattttaattaaataaccaaaacgatactacctaaatagttaagggaccaaa 15670523  T
Q  108 aatataatttaa 119  Q
    |||| |||||||    
T  15670524 aatacaatttaa 15670535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 33763027 - 33762922
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaattta--agggatcaaaataaatcgaattttaa-ttaagggaacaaagagatacta-ctaaatagt 95  Q
    |||||||| | ||||||||| ||||| |||||||| |||  |||||||||||||||||||||||||| |||||||| ||||| ||||||| ||||||| |    
T  33763027 ctaacggaaatgaccaaaatatgtaacagagagaagttataagggatcaaaataaatcgaattttaatttaagggaccaaagcgatactacctaaataat 33762928  T
Q  96 taaggg 101  Q
    ||||||    
T  33762927 taaggg 33762922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 36752175 - 36752276
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactac-taaatagttaagggaccaaa 107  Q
    |||||||||||||| || | |||||| |||| ||| |||||||||||||||||||||||| |||   ||| |||||||| ||||||||||||||||||||    
T  36752175 aggaccaaaatgtgcaacaaagagaagttaatggaccaaaataaatcgaattttaattaa-ggattgaagcgatactacataaatagttaagggaccaaa 36752273  T
Q  108 aat 110  Q
    |||    
T  36752274 aat 36752276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 12593567 - 12593467
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| ||| |||| |||||| | ||| ||||||||||||||| ||||||||   ||| ||||||| |||||||||||||||| ||||||    
T  12593567 gaccaaaatgtgtaacagaaagaagttaaggaaccaatataaatcgaattttagttaagggactgaagcgatactacctaaatagttaagggatcaaaaa 12593468  T
Q  110 t 110  Q
    |    
T  12593467 t 12593467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 14143780 - 14143880
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| |||||||| ||||| || ||||||||||  ||||||||| ||| || |||||  |||||||| |||||||||| ||||||||||    
T  14143780 gaccaaaatgtgtaacagagagaagttaagagaccaaaataaattaaattttaatgaagagaccaaagtaatactacttaaatagttaaaggaccaaaaa 14143879  T
Q  110 t 110  Q
    |    
T  14143880 t 14143880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 16353240 - 16353154
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaa---tagttaagggaccaaaaatataattta 118  Q
    |||||||| ||||||||||| |||||||||||||||| ||||  ||||||| |||||   ||||||||||||||||||| |||||||    
T  16353240 ttaagggaccaaaataaatcaaattttaattaagggaccaaatcgatactacctaaatagtagttaagggaccaaaaatgtaattta 16353154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 40774612 - 40774712
Alignment:
Q  12 gaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||| | | |||||| | |||||| ||||||||||||||||||||||||||||  |||| ||||||| ||||||| |||||| | ||||||    
T  40774612 gaccaaaatgtgtgacgtagagaaataaagggaccaaaataaatcgaattttaattaagggactaaagcgatactagctaaataattaaggaatcaaaaa 40774711  T
Q  110 t 110  Q
    |    
T  40774712 t 40774712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 8418322 - 8418212
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||| ||||||||||| |||||||| |||||  | ||||||||||||||||||||||||| || ||||  ||||||| ||||||| ||||    
T  8418322 ctaacggaaatgacaaaaatgtgtaacagagagaagttaaga-accaaaataaatcgaattttaattaagtgaccaaaacgatactacctaaataattaa 8418224  T
Q  99 gggaccaaaaat 110  Q
     |||||||||||    
T  8418223 tggaccaaaaat 8418212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 26289313 - 26289395
Alignment:
Q  28 gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    ||||||| |||||| |||||||| ||||||||||||||||||||| ||||  |||||||  ||||||||||| |||||||||||    
T  26289313 gagagaagttaagg-atcaaaatgaatcgaattttaattaagggaccaaaacgatactatttaaatagttaaaggaccaaaaat 26289395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 5460272 - 5460330
Alignment:
Q  62 taattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaatataatttaa 119  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||||||| |||||||    
T  5460272 taattaagggaccaaagcgatactatctaaatagttaagggaccaaaaatacaatttaa 5460330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 110
Target Start/End: Complemental strand, 19205009 - 19204955
Alignment:
Q  57 aattttaattaagggaacaaagagatactac-taaatagttaagggaccaaaaat 110  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  19205009 aattttaattaagggaccaaagtgatactacctaaatagttaagggaccaaaaat 19204955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 3879295 - 3879387
Alignment:
Q  18 aatgtgtaaagagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactact-aaatagttaagggaccaaaaat 110  Q
    |||||||||| |||||| ||||| || ||||||||||| |||||||| ||| | | |||||  |||||||| ||||||||||||||||||||||    
T  3879295 aatgtgtaaa-agagaagttaagagaccaaaataaatcaaattttaaataatgaaccaaagtcatactacttaaatagttaagggaccaaaaat 3879387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 38416265 - 38416165
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaa-gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | || ||||||||||||  ||||||| |||||  | |||||||||| ||||||||||||||||| ||||| ||||||| ||||||| ||||    
T  38416265 ctaacggaaatgatcaaaatgtgtaaccgagagaagttaagaaaacaaaataaattgaattttaattaagggaccaaagcgatactacctaaataattaa 38416166  T
Q  99 g 99  Q
    |    
T  38416165 g 38416165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 39706145 - 39706066
Alignment:
Q  28 gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactactaaatagttaagggaccaaaaat 110  Q
    ||||||| |||||||| |||||||||||||||||||||||| ||| ||||| | |||   |||||||||||| ||||||||||    
T  39706145 gagagaagttaagggaccaaaataaatcgaattttaattaaaggaccaaagcg-tac--ataaatagttaagagaccaaaaat 39706066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 42710463 - 42710404
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaa 68  Q
    ||||||||||||||||| | |||||| |||| ||| ||||||||||||||||||||||||    
T  42710463 aggaccaaaatgtgtaacatagagaagttaatggaccaaaataaatcgaattttaattaa 42710404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 19185545 - 19185631
Alignment:
Q  33 aatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaatataattta 118  Q
    ||||||||||| ||||||||||| ||||||| ||| |||| ||||   ||||| | ||||||||||||||||||||||  |||||||    
T  19185545 aatttaagggaccaaaataaatcaaattttagttaggggaccaaaccaatactaattaaatagttaagggaccaaaaaggtaattta 19185631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 25923383 - 25923460
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaa 77  Q
    |||||||| | ||||||||| ||||| | |||||| ||||| || |||||||||| ||||||||||||||||| ||||    
T  25923383 ctaacggaaatgaccaaaatatgtaacggagagaaattaagagaccaaaataaattgaattttaattaagggaccaaa 25923460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 5152693 - 5152627
Alignment:
Q  45 caaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaat 110  Q
    ||||||||||| |||||||||||||||  |||||  ||||| | || ||||||||||||||||||||    
T  5152693 caaaataaatcaaattttaattaaggggccaaagtcatactaattacatagttaagggaccaaaaat 5152627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 65; Significance: 9e-29; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 13 - 119
Target Start/End: Original strand, 13817 - 13925
Alignment:
Q  13 accaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||||||||| | |||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||||| ||||||||||||    
T  13817 accaaaatgtgtaacaaagagaagttaagggaccaaaataaatcgaattttaattaagggaccaaagcgatactacctaaatagttaggggaccaaaaat 13916  T
Q  111 ataatttaa 119  Q
    | |||||||    
T  13917 acaatttaa 13925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 13652 - 13553
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||| ||||||| ||||||| |||||  || || ||||||||||||| ||||||||||    
T  13652 gaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcggattttaactaagggaccaaagcaattctaactaaatagttaa-ggaccaaaaa 13554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 11335 - 11228
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||  ||||  |||||| ||||||||||||    
T  11335 ctaacggaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaatcgaattttaattaagggacgaaagcaatactacctaaatagttaa 11236  T
Q  99 gggaccaa 106  Q
    ||||||||    
T  11235 gggaccaa 11228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 11478 - 11581
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||| ||| ||||||||||||||||| |||||||| |||||||| |||||||||| ||||||||||||||||| ||||| ||||||| ||||||||||||    
T  11478 ctaatggaaaggaccaaaatgtgtaacagagagaagttaagggaccaaaataaattgaattttaattaagggaccaaagcgatactacctaaatagttaa 11577  T
Q  99 ggga 102  Q
    ||||    
T  11578 ggga 11581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 60; Significance: 9e-26; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 40616 - 40727
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| | |||||| |||| | | |||||||||||||||||||||||||||| |||||  |||||| ||||||||||||    
T  40616 ctaacggaaaggaccaaaatgtgtaacggagagaagttaatgaaccaaaataaatcgaattttaattaagggaccaaagcaatactacctaaatagttaa 40715  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  40716 gggaccaaaaat 40727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 40474 - 40355
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| || |||||||| ||||| | |||| | |||||||| | ||||||||| ||||||||||||||||  |||| ||||||| ||||||| ||||    
T  40474 ctaacggaaagaaccaaaatctgtaacgtagagtaattaagggaccgaaataaatcaaattttaattaagggactaaagcgatactatctaaataattaa 40375  T
Q  99 gggaccaaaaatataattta 118  Q
    ||||||||||||| ||||||    
T  40374 gggaccaaaaatacaattta 40355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 11778 - 11862
Alignment:
Q  27 agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||| |||||||| |||||||||||||||||||||||| ||| ||||| ||||||| ||||||||||||||||||||||||    
T  11778 agagagaagttaagggaccaaaataaatcgaattttaattaaaggaccaaagcgatactacctaaatagttaagggaccaaaaat 11862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 11582 - 11499
Alignment:
Q  28 gagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatac-tactaaatagttaagggaccaaaaat 110  Q
    ||||||| ||||||||  ||||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||||||||||    
T  11582 gagagaagttaagggactaaaataaatcgaattttaattaagggaccaaagcgatactttctaaatagttaagggaccaaaaat 11499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 56; Significance: 2e-23; HSPs: 4)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 65861 - 65750
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||| || |||||  ||| || ||||||||||||    
T  65861 ctaacggaaatgaccaaaatgtgtaatggagagaagttaagggatcaaaataaatcgaattttaattaagagaccaaagcaatattacctaaatagttaa 65762  T
Q  99 gggaccaaaaat 110  Q
    | ||||||||||    
T  65761 gagaccaaaaat 65750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 73193 - 73082
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaag-agagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| | ||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||| || |||||  ||| || ||||||||||||    
T  73193 ctaacggaaatgaccaaaatgtgtaatggagagaagttaagggatcaaaataaatcgaattttaattaagagaccaaagcaatattacctaaatagttaa 73094  T
Q  99 gggaccaaaaat 110  Q
    | ||||||||||    
T  73093 gagaccaaaaat 73082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 66012 - 66127
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||||||||| ||||| | |||||| ||||||||  ||||||||| ||||||||||||||| |  |||  ||||||| ||||||||||||| |||||||    
T  66012 aggaccaaaatatgtaacaaagagaagttaagggactaaaataaattgaattttaattaaggaactaaaacgatactacctaaatagttaagcgaccaaa 66111  T
Q  108 aatataatttaatcaa 123  Q
    ||| ||||||| ||||    
T  66112 aatgtaatttagtcaa 66127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 73344 - 73459
Alignment:
Q  10 aggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaa 107  Q
    ||||||||||| ||||| | |||||| ||||||||  ||||||||| ||||||||||||||| |  |||  ||||||| ||||||||||||| |||||||    
T  73344 aggaccaaaatatgtaacaaagagaagttaagggactaaaataaattgaattttaattaaggaactaaaacgatactacctaaatagttaagcgaccaaa 73443  T
Q  108 aatataatttaatcaa 123  Q
    ||| ||||||| ||||    
T  73444 aatgtaatttagtcaa 73459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 177329 - 177440
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| |||| |||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||| | |   |||| || ||||||| ||||    
T  177329 ctaacggaaaggaacaaaatgtgtaacatagagaagttaagggatcaaaataaatcgaattttaattaagggatcgatctgataatacctaaataattaa 177428  T
Q  99 gggaccaaaaat 110  Q
    ||||||||||||    
T  177429 gggaccaaaaat 177440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1436 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold1436
Description:

Target: scaffold1436; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 110
Target Start/End: Complemental strand, 1582 - 1487
Alignment:
Q  17 aaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||||||| | |||||| |||||||||||||||||||| |||||||||||||||| ||| | ||||||| ||||||||||||| ||| ||||||    
T  1582 aaatgtgtaacaaagagaagttaagggatcaaaataaatcaaattttaattaagggaccaatgcgatactacctaaatagttaagtgacaaaaaat 1487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1436; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 1750 - 1815
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaa 77  Q
    ||||||||||||||| |||||||| |||| |||||||||||||||| ||||||||||||||| ||||    
T  1750 gaccaaaatgtgtaacagagagaagttaatggatcaaaataaatcg-attttaattaagggaccaaa 1815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 90927 - 90816
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaa 98  Q
    |||||||| ||||||||||||||||| ||| |||| |||||  | ||||||||||| ||||| ||||||||||  |||| ||||||| ||||||||||||    
T  90927 ctaacggaaaggaccaaaatgtgtaagagaaagaagttaagttaccaaaataaatcaaatttcaattaagggacaaaagcgatactacctaaatagttaa 90828  T
Q  99 gggaccaaaaat 110  Q
    ||||| ||||||    
T  90827 gggactaaaaat 90816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 91772 - 91844
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaaggga 72  Q
    |||||||| |||||||||||||| || ||| |||| |||||  | ||||||||||| ||||||||||||||||    
T  91772 ctaacggaaaggaccaaaatgtgcaagagaaagaagttaagttaccaaaataaatcaaattttaattaaggga 91844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 45111 - 45211
Alignment:
Q  12 gaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaa 109  Q
    ||||||||||||||| | |||||| |||||||| || |||||||| | |||||||||||||| ||||| |||| || ||||||||||||||||| |||||    
T  45111 gaccaaaatgtgtaacaaagagaagttaagggaccacaataaatcaatttttaattaagggagcaaagcgataatacctaaatagttaagggactaaaaa 45210  T
Q  110 t 110  Q
    |    
T  45211 t 45211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 93312 - 93191
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaaagagaga---atttaagggatcaaaataaatcgaattttaattaagggaacaaagagatactact-aaatagtt 96  Q
    |||||| | |||||||||||||||||| |||||   | |||||  | ||||||||||| ||||||||||||| ||  |||  ||||||| | ||||||||    
T  93312 ctaacgtaaaggaccaaaatgtgtaaacagagagaaagttaagataccaaaataaatcaaattttaattaagtgactaaaacgatactaattaaatagtt 93213  T
Q  97 aagggaccaaaaatataattta 118  Q
    ||||||||||||||| ||||||    
T  93212 aagggaccaaaaatacaattta 93191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 11790 - 11713
Alignment:
Q  1 ctaacggataggaccaaaatgtgtaa-agagagaatttaagggatcaaaataaatcgaattttaattaagggaacaaa 77  Q
    |||||||| ||||||||||||||||| | |||||| |||||||| ||||||||||| ||||||| | |||||| ||||    
T  11790 ctaacggaaaggaccaaaatgtgtaacaaagagaagttaagggaccaaaataaatcaaattttagtcaagggaccaaa 11713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 11723 - 11650
Alignment:
Q  38 aagggatcaaaataaatcgaattttaattaagggaacaaagagatacta-ctaaatagttaagggaccaaaaat 110  Q
    |||||| ||||||||||| ||||||| |||||||| ||||| |||| || |||||||||||||| | |||||||    
T  11723 aagggaccaaaataaatcaaattttagttaagggaccaaagcgataatacctaaatagttaaggtatcaaaaat 11650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 36 - 109
Target Start/End: Original strand, 10920 - 10994
Alignment:
Q  36 ttaagggatcaaaataaatcgaattttaattaagggaacaaagagatact-actaaatagttaagggaccaaaaa 109  Q
    |||||||| ||||||||||| ||||||| ||| |||| ||||  |||||| | ||||||||||||||||||||||    
T  10920 ttaagggaccaaaataaatcaaattttagttaggggaccaaaccgatactaattaaatagttaagggaccaaaaa 10994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 26044 - 25980
Alignment:
Q  45 caaaataaatcgaattttaattaagggaacaaagagata-ctactaaatagttaagggaccaaaa 108  Q
    ||||||||||||| |||||||||||||| ||||| |||| | |||| ||||||| | ||||||||    
T  26044 caaaataaatcgagttttaattaagggatcaaagtgataccaactacatagttaggagaccaaaa 25980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University