View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8810_low_7 (Length: 306)
Name: NF8810_low_7
Description: NF8810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8810_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 20 - 290
Target Start/End: Original strand, 37443699 - 37443969
Alignment:
| Q |
20 |
acactctcccaattaccttcaaatctcaacgatgccgcaacccttcttgtttccttcaaaccatcaacgctaaccctaactccgattccgatgacgatca |
119 |
Q |
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| T |
37443699 |
acactctcccaattaccttcaaatctcaacgatgccgcaacccttcttgtttccttcaaaccatcaacgctaaccctaactccgattccgatgacgatca |
37443798 |
T |
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| Q |
120 |
ccggaacaattccaccaccctcactctatcctccacccgcgcactcgcctcggccattcgaaaagtctccacctcacccgtcgagttcactcagcgactc |
219 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37443799 |
ccggaacaattccaccaccctcactctatcctccacccgcgcactcgcctccgccattcgaaaagtctccacctcacccgtcgagttcactcagcgactc |
37443898 |
T |
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| Q |
220 |
gaaaaacatcctagaaacggactccttcttcctagtcccgatttccatagactctgcctccaacaacttca |
290 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37443899 |
gaaaaacatcctagaaacggactcgttcttcctagtcccgatttccatagactctgcctccaacaacttca |
37443969 |
T |
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