View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8811_low_13 (Length: 252)

Name: NF8811_low_13
Description: NF8811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8811_low_13
NF8811_low_13
[»] chr8 (36 HSPs)
chr8 (156-236)||(15797257-15797337)
chr8 (5-132)||(20301320-20301447)
chr8 (5-132)||(21087952-21088079)
chr8 (5-88)||(15797141-15797224)
chr8 (5-132)||(11232327-11232454)
chr8 (5-132)||(41790717-41790844)
chr8 (5-132)||(3157457-3157584)
chr8 (7-132)||(12688131-12688256)
chr8 (5-132)||(31197674-31197800)
chr8 (5-110)||(18004227-18004332)
chr8 (5-132)||(8084186-8084313)
chr8 (5-130)||(20094693-20094818)
chr8 (7-132)||(39052829-39052954)
chr8 (5-132)||(5932082-5932209)
chr8 (38-132)||(24532352-24532446)
chr8 (18-115)||(7669495-7669592)
chr8 (1-115)||(10615470-10615584)
chr8 (71-132)||(11232158-11232219)
chr8 (5-102)||(35682914-35683011)
chr8 (5-79)||(3157142-3157216)
chr8 (5-131)||(5675954-5676080)
chr8 (18-132)||(15042795-15042911)
chr8 (7-76)||(39052672-39052741)
chr8 (1-61)||(5589869-5589929)
chr8 (24-132)||(12317105-12317213)
chr8 (18-132)||(422364-422478)
chr8 (10-132)||(31079478-31079600)
chr8 (39-132)||(37001285-37001381)
chr8 (5-74)||(39960074-39960143)
chr8 (10-130)||(10614842-10614962)
chr8 (40-132)||(19256753-19256845)
chr8 (7-125)||(8466623-8466742)
chr8 (31-132)||(26208172-26208274)
chr8 (71-132)||(38476097-38476159)
chr8 (5-53)||(5675867-5675915)
chr8 (7-59)||(37867968-37868020)
[»] chr6 (23 HSPs)
chr6 (5-132)||(13353260-13353387)
chr6 (5-132)||(33796385-33796512)
chr6 (5-132)||(4868710-4868838)
chr6 (5-132)||(33494598-33494725)
chr6 (11-132)||(12330083-12330204)
chr6 (5-132)||(9705079-9705205)
chr6 (5-102)||(17147793-17147890)
chr6 (18-132)||(6542854-6542968)
chr6 (7-132)||(3680071-3680196)
chr6 (1-106)||(31961028-31961133)
chr6 (17-132)||(6237617-6237732)
chr6 (5-126)||(6400753-6400873)
chr6 (69-132)||(19712775-19712838)
chr6 (15-132)||(6054228-6054345)
chr6 (48-132)||(11085640-11085724)
chr6 (5-132)||(32290787-32290914)
chr6 (55-132)||(8001497-8001575)
chr6 (5-115)||(33631703-33631813)
chr6 (69-132)||(8026448-8026511)
chr6 (24-132)||(15082059-15082169)
chr6 (86-119)||(1788928-1788961)
chr6 (24-132)||(2736318-2736427)
chr6 (87-132)||(27653276-27653321)
[»] chr7 (33 HSPs)
chr7 (7-132)||(33834250-33834375)
chr7 (5-132)||(21861353-21861480)
chr7 (5-132)||(36277124-36277251)
chr7 (7-132)||(25620195-25620320)
chr7 (5-132)||(1596652-1596779)
chr7 (5-132)||(29469664-29469791)
chr7 (7-132)||(33996214-33996336)
chr7 (7-132)||(48661455-48661580)
chr7 (7-132)||(31485559-31485684)
chr7 (8-132)||(4886388-4886512)
chr7 (7-131)||(22574661-22574785)
chr7 (5-132)||(2404306-2404433)
chr7 (5-132)||(3519937-3520064)
chr7 (10-132)||(44874481-44874603)
chr7 (7-134)||(9689005-9689127)
chr7 (5-115)||(36993206-36993316)
chr7 (11-115)||(18826392-18826496)
chr7 (72-132)||(21821865-21821925)
chr7 (10-132)||(31892210-31892333)
chr7 (7-79)||(2315161-2315233)
chr7 (5-61)||(3519858-3519914)
chr7 (2-125)||(5871850-5871974)
chr7 (18-115)||(20305366-20305467)
chr7 (69-132)||(10882201-10882264)
chr7 (69-124)||(28080731-28080786)
chr7 (5-80)||(40746165-40746240)
chr7 (55-132)||(26239863-26239941)
chr7 (7-80)||(30727254-30727327)
chr7 (81-132)||(3038058-3038109)
chr7 (7-132)||(22339503-22339628)
chr7 (91-132)||(5871796-5871837)
chr7 (40-132)||(34027452-34027544)
chr7 (92-132)||(40121909-40121949)
[»] scaffold0692 (1 HSPs)
scaffold0692 (5-132)||(5652-5779)
[»] chr5 (38 HSPs)
chr5 (5-132)||(95399-95526)
chr5 (5-132)||(41666890-41667018)
chr5 (5-132)||(9368654-9368781)
chr5 (5-132)||(15480381-15480508)
chr5 (5-132)||(18333597-18333724)
chr5 (5-132)||(32908850-32908977)
chr5 (5-115)||(25258199-25258309)
chr5 (5-115)||(25321989-25322099)
chr5 (7-132)||(17150368-17150493)
chr5 (5-132)||(24346634-24346762)
chr5 (7-132)||(43117706-43117831)
chr5 (5-124)||(24270003-24270123)
chr5 (5-132)||(6919327-6919454)
chr5 (5-132)||(17352567-17352693)
chr5 (18-115)||(6413568-6413665)
chr5 (5-102)||(8081247-8081344)
chr5 (1-132)||(26137238-26137370)
chr5 (5-132)||(24531658-24531785)
chr5 (7-97)||(13700725-13700815)
chr5 (18-102)||(11896302-11896386)
chr5 (7-115)||(16704618-16704726)
chr5 (5-79)||(15590050-15590124)
chr5 (7-60)||(2062049-2062102)
chr5 (76-132)||(2063703-2063759)
chr5 (5-61)||(33337371-33337427)
chr5 (5-132)||(38731735-38731863)
chr5 (7-61)||(17016010-17016064)
chr5 (87-132)||(29909701-29909746)
chr5 (7-115)||(20510777-20510884)
chr5 (9-53)||(30770186-30770230)
chr5 (69-132)||(13296731-13296794)
chr5 (7-45)||(11896050-11896088)
chr5 (91-132)||(1564551-1564592)
chr5 (92-132)||(1028383-1028423)
chr5 (40-132)||(8098376-8098468)
chr5 (5-53)||(18885365-18885413)
chr5 (8-132)||(20225100-20225224)
chr5 (9-61)||(34327519-34327571)
[»] chr4 (35 HSPs)
chr4 (5-132)||(22231206-22231333)
chr4 (5-132)||(40717339-40717466)
chr4 (5-128)||(28245659-28245782)
chr4 (5-132)||(35788718-35788846)
chr4 (5-132)||(35796875-35797002)
chr4 (7-132)||(50543465-50543592)
chr4 (5-132)||(35819026-35819153)
chr4 (22-134)||(4905651-4905763)
chr4 (8-132)||(22445511-22445635)
chr4 (3-130)||(6666531-6666658)
chr4 (5-79)||(5398608-5398682)
chr4 (7-134)||(13555382-13555504)
chr4 (5-102)||(27634214-27634311)
chr4 (5-132)||(52559626-52559755)
chr4 (5-132)||(6218263-6218390)
chr4 (39-132)||(7926387-7926480)
chr4 (7-115)||(4645718-4645826)
chr4 (10-61)||(5398348-5398399)
chr4 (5-60)||(35645298-35645353)
chr4 (5-60)||(35645587-35645642)
chr4 (18-132)||(11036657-11036771)
chr4 (91-132)||(24513344-24513385)
chr4 (71-132)||(34357994-34358055)
chr4 (40-132)||(40716553-40716646)
chr4 (5-61)||(6778576-6778632)
chr4 (40-132)||(9685457-9685549)
chr4 (48-132)||(30530103-30530187)
chr4 (69-132)||(14783149-14783212)
chr4 (30-132)||(36686064-36686166)
chr4 (87-132)||(12869243-12869288)
chr4 (98-131)||(23209901-23209934)
chr4 (8-100)||(25324170-25324263)
chr4 (11-115)||(25323937-25324041)
chr4 (1-53)||(31945060-31945112)
chr4 (92-132)||(53828508-53828548)
[»] chr2 (29 HSPs)
chr2 (5-132)||(14466308-14466435)
chr2 (5-130)||(2029830-2029955)
chr2 (5-132)||(40149134-40149261)
chr2 (5-130)||(16419328-16419453)
chr2 (5-132)||(5711572-5711700)
chr2 (5-132)||(40379342-40379469)
chr2 (7-113)||(17525234-17525339)
chr2 (5-132)||(93252-93379)
chr2 (5-113)||(16533390-16533498)
chr2 (7-132)||(33606189-33606314)
chr2 (18-110)||(34893506-34893598)
chr2 (1-102)||(18607138-18607239)
chr2 (5-132)||(15124681-15124808)
chr2 (18-132)||(17719459-17719573)
chr2 (18-132)||(24395922-24396036)
chr2 (7-132)||(32356444-32356567)
chr2 (5-102)||(37812401-37812498)
chr2 (36-132)||(93556-93652)
chr2 (18-98)||(30701169-30701249)
chr2 (69-131)||(21383631-21383694)
chr2 (71-130)||(31700936-31700995)
chr2 (32-132)||(13210585-13210686)
chr2 (7-132)||(13250157-13250282)
chr2 (4-53)||(19981908-19981957)
chr2 (87-132)||(27897586-27897631)
chr2 (7-115)||(42895323-42895432)
chr2 (40-132)||(5509138-5509230)
chr2 (92-132)||(28407778-28407818)
chr2 (7-98)||(44404061-44404153)
[»] scaffold0519 (1 HSPs)
scaffold0519 (5-132)||(1975-2102)
[»] chr1 (32 HSPs)
chr1 (5-132)||(2859525-2859652)
chr1 (6-132)||(35772088-35772214)
chr1 (5-132)||(26176967-26177094)
chr1 (1-132)||(51460336-51460467)
chr1 (5-132)||(39348250-39348377)
chr1 (5-132)||(4112904-4113031)
chr1 (10-132)||(4098306-4098428)
chr1 (19-132)||(30369894-30370007)
chr1 (7-115)||(4112675-4112783)
chr1 (7-101)||(25713248-25713342)
chr1 (7-132)||(33156792-33156918)
chr1 (7-132)||(27413406-27413531)
chr1 (1-102)||(52961436-52961537)
chr1 (5-132)||(25145618-25145745)
chr1 (21-132)||(26173370-26173481)
chr1 (7-132)||(7307780-7307905)
chr1 (13-132)||(16162992-16163111)
chr1 (5-132)||(38668184-38668311)
chr1 (7-132)||(7653300-7653425)
chr1 (69-132)||(8870872-8870935)
chr1 (69-115)||(26346931-26346977)
chr1 (5-132)||(38733210-38733333)
chr1 (5-45)||(8870822-8870862)
chr1 (40-132)||(51589051-51589143)
chr1 (5-44)||(369779-369818)
chr1 (1-44)||(768971-769014)
chr1 (29-132)||(31496293-31496396)
chr1 (69-132)||(51460012-51460075)
chr1 (69-132)||(51589865-51589928)
chr1 (18-115)||(9146774-9146872)
chr1 (7-52)||(12325432-12325477)
chr1 (96-132)||(2120136-2120172)
[»] chr3 (31 HSPs)
chr3 (8-132)||(35038330-35038453)
chr3 (5-132)||(4155383-4155510)
chr3 (7-132)||(20303285-20303410)
chr3 (7-132)||(16239650-16239776)
chr3 (7-132)||(20327749-20327874)
chr3 (1-132)||(13574814-13574946)
chr3 (8-102)||(19954353-19954447)
chr3 (5-110)||(34992687-34992792)
chr3 (25-132)||(45828078-45828185)
chr3 (5-132)||(31317287-31317417)
chr3 (69-132)||(33640104-33640168)
chr3 (7-103)||(52724121-52724217)
chr3 (18-132)||(8142558-8142672)
chr3 (18-132)||(26272235-26272349)
chr3 (7-132)||(49629664-49629790)
chr3 (70-132)||(54368575-54368637)
chr3 (55-132)||(54567951-54568028)
chr3 (1-61)||(22729623-22729683)
chr3 (5-84)||(20303197-20303276)
chr3 (7-113)||(22775534-22775641)
chr3 (7-110)||(34659137-34659240)
chr3 (7-106)||(39269159-39269258)
chr3 (87-132)||(1723056-1723101)
chr3 (56-132)||(12930076-12930153)
chr3 (5-66)||(39683401-39683462)
chr3 (75-131)||(35018535-35018591)
chr3 (69-132)||(11589844-11589907)
chr3 (5-130)||(26753419-26753544)
chr3 (7-36)||(29215723-29215752)
chr3 (18-102)||(24866132-24866215)
chr3 (69-125)||(28087177-28087233)
[»] scaffold0092 (1 HSPs)
scaffold0092 (12-132)||(5714-5834)
[»] scaffold0129 (1 HSPs)
scaffold0129 (10-132)||(14362-14484)
[»] scaffold0048 (1 HSPs)
scaffold0048 (5-132)||(81901-82027)
[»] scaffold0045 (1 HSPs)
scaffold0045 (7-115)||(41106-41214)
[»] scaffold0729 (1 HSPs)
scaffold0729 (5-61)||(2624-2680)
[»] scaffold0047 (1 HSPs)
scaffold0047 (5-132)||(12706-12833)
[»] scaffold0005 (1 HSPs)
scaffold0005 (69-132)||(56518-56581)
[»] scaffold0366 (1 HSPs)
scaffold0366 (7-98)||(14497-14589)


Alignment Details
Target: chr8 (Bit Score: 77; Significance: 8e-36; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 15797257 - 15797337
Alignment:
Q  156 ccattttattggtacaagaatcccatgttagctggacatgtttcagaagaaatggatataggactaattgagtttaccaat 236  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15797257 ccattttattggtacaagaatcccaagttagctggacatgtttcagaagaaatggatataggactaattgagtttaccaat 15797337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 20301447 - 20301320
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||| ||||||||| |||||||| ||||||| ||||||| ||| | ||||||||||| |||| ||||||||||||||||| |    
T  20301447 agcactattgggcttggttcgtagacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgatacc 20301348  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||| ||||||||||||    
T  20301347 atcttagaaatcgtggttgggcctaaca 20301320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 21088079 - 21087952
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||| ||||||||| |||||||| ||||||| ||||||| ||| | ||||||||||| |||| ||||||||||||||||| |    
T  21088079 agcactattgggcttggttcgtagacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgatacc 21087980  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||| ||||||||||||    
T  21087979 atcttagaaatcgtggttgggcctaaca 21087952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 15797141 - 15797224
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttg 88  Q
    |||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15797141 agcactattgggcttggttcgtggacataaatggtggatgggccgatagaggaaacccgatggaaggtggcccaacggatgttg 15797224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 11232327 - 11232454
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||||||||||||| |||||||   |||||| ||||||| |||   ||||||||||| |||| ||| ||||||||||||| |    
T  11232327 agcactattgggcttggttcgtggacataaatggtgggtgactcgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgatacc 11232426  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||||||| ||||||||||||    
T  11232427 atcttagaaatggtggttgggcctaaca 11232454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 41790844 - 41790717
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||| ||||| ||||||| ||||||||||| ||||||||  |||||| ||||||| ||| | ||||||||||| |||| ||||||||||||||||| |    
T  41790844 agcactcttgggcttggttcatggacataaatggtgggtggctcgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgatacc 41790745  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||| ||||||||||||    
T  41790744 atcttagaaatcgtggttgggcctaaca 41790717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 3157457 - 3157584
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||||||||||||| |||||||  ||||||| | ||||| ||| | |||||| |||| |||| ||| |||||||||||||||    
T  3157457 agcactattgggcttggttcgtggacataaatggtgggtgtcccgatagcgaaaacctgatagcaggtggtccaatggattttggagaggctctgatatc 3157556  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    |||||| |||||||| ||| ||||||||    
T  3157557 atcttataaatggtggttgagcctaaca 3157584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 12688256 - 12688131
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    |||||||||| || |||||||||||||||| |||||||| || ||||| |||||| ||| | ||||||||||| |||| ||||||||||||| |||||||    
T  12688256 cactattgggcttagttcgtggacataaatggtgggtggcccaatagaagaaacctgatagcaggtggcccaatggatcttgaagaggctctaatatcat 12688157  T
Q  107 cttagaaatggtgattgggcctaaca 132  Q
    ||||||||| ||| ||| | ||||||    
T  12688156 cttagaaatcgtgtttgagtctaaca 12688131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 31197800 - 31197674
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||| | ||||||||||||||||||| |||||||| ||||||| ||||||| ||| | ||||||||||| |||| | | ||||||||||||| |    
T  31197800 agcactattgagcttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatctcggagaggctctgatacc 31197701  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    |||||||||||  || ||||||||||||    
T  31197700 atcttagaaat-ctggttgggcctaaca 31197674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 18004227 - 18004332
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    ||||||||| || ||||||||||||||||||| |||||||| ||||||| ||||||| ||| | ||||||||||| |||| ||| ||||||||||||| |    
T  18004227 agcactattaggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgatacc 18004326  T
Q  105 atctta 110  Q
    ||||||    
T  18004327 atctta 18004332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 8084313 - 8084186
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||||||||||||| |||||||  || |||| | ||||| ||| | | ||||||||| |||| ||| ||||||||||||| |    
T  8084313 agcactattgggcttggttcgtggacataaatggtgggtgatccaatagcgaaaacctgatagcatgtggcccaatggatcttggagaggctctgatacc 8084214  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||| ||||| ||||||    
T  8084213 atcttagaaatcgtggttgggtctaaca 8084186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 20094693 - 20094818
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||||||||||||| |||||||| | ||||| | ||||| ||| | ||||||||||| |||| |||||||  |||||||| |    
T  20094693 agcactattgggcttggttcgtggacataaatggtgggtggcctgatagcgaaaacctgataggaggtggcccaatggatcttgaagaaactctgatacc 20094792  T
Q  105 atcttagaaatggtgattgggcctaa 130  Q
    | |||| |||| ||| ||||||||||    
T  20094793 aacttataaatcgtggttgggcctaa 20094818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 39052829 - 39052954
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    |||||||||| ||||||||||||||||||| |||||||| | ||||| ||||||| ||| | ||| |||| || |||| ||| ||||||||| ||| |||    
T  39052829 cactattgggcttggttcgtggacataaatggtgggtggccggatagcggaaacctgatagcagggggccaaatggatcttggagaggctctaataccat 39052928  T
Q  107 cttagaaatggtgattgggcctaaca 132  Q
    ||||||||| ||  ||||||||||||    
T  39052929 cttagaaatcgttgttgggcctaaca 39052954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 5932082 - 5932209
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||| | |||||| || ||||||||| |||||||| ||||||  ||||||  ||| | |||||| |||| |||| ||| ||||||||||||| |    
T  5932082 agcactattgcgcttggtttgtcgacataaatggtgggtggcccgataacggaaacgtgatagtaggtggtccaatggatcttggagaggctctgatacc 5932181  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    |||||| |||||||| ||||||||||||    
T  5932182 atcttaaaaatggtggttgggcctaaca 5932209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 38 - 132
Target Start/End: Original strand, 24532352 - 24532446
Alignment:
Q  38 gtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    |||||||| ||||||| ||||||| ||| | ||||||||||| |||| |||||| |||||||||| ||||||||||||  || ||||||||||||    
T  24532352 gtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttgaaggggctctgataccatcttagaaatcatggttgggcctaaca 24532446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 7669592 - 7669495
Alignment:
Q  18 ttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaat 115  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||| ||| | ||||||| ||| |||| |||||||| || ||||| ||||||| ||||    
T  7669592 ttggttcgtggacataaatggtgggtggtccgatagtggaaacctgatagcaggtggctcaatggatcttgaagagactttgataccatcttaaaaat 7669495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 10615584 - 10615470
Alignment:
Q  1 gactagcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctga 100  Q
    |||||||||||||||  |||||||||||| |||||| || ||||  ||||||| ||||||| |||   ||||||  ||| |||| ||| |||||||||||    
T  10615584 gactagcactattggacttggttcgtggagataaatagttggtgacccgatagcggaaacctgatatcaggtggtacaatggatcttggagaggctctga 10615485  T
Q  101 tatcatcttagaaat 115  Q
    || ||||||||||||    
T  10615484 taccatcttagaaat 10615470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 11232158 - 11232219
Alignment:
Q  71 gtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||||| |||| ||| ||||||||||||| |||||||||||||||| ||||||||||||    
T  11232158 gtggcccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaaca 11232219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 35682914 - 35683011
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgata 102  Q
    |||||||||| | ||||||||||||||||||| |||||||| ||||||| |||||||  || | ||||||||||| |||| ||| ||| ||| |||||    
T  35682914 agcactattgagcttggttcgtggacataaatggtgggtggcccgatagcggaaacctaatagcaggtggcccaatggatcttggagatgctatgata 35683011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 3157142 - 3157216
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaa 79  Q
    |||||||||||| ||||||||||||||||||| |||||||  ||||||| ||||||| ||| | |||||| ||||    
T  3157142 agcactattgggcttggttcgtggacataaatggtgggtgtcccgatagcggaaacctgatagcaggtggtccaa 3157216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 5675954 - 5676080
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||| ||||||| ||||||||| ||||||||| |||||||  || |||  | ||||| ||| | |||||||| |  | || |||||||| ||||||||||    
T  5675954 agcagtattgggcttggttcgtagacataaatggtgggtgacccaatatcgaaaacctgatagcaggtggcctagtgaatcttgaagagactctgatatc 5676053  T
Q  105 atcttagaaatggtgattgggcctaac 131  Q
    ||||||||||| ||| |||| ||||||    
T  5676054 atcttagaaatcgtggttggacctaac 5676080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 15042795 - 15042911
Alignment:
Q  18 ttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttg--aagaggctctgatatcatcttagaaat 115  Q
    ||||||||||||||||||  |||||||| | ||||| ||||||| ||| | ||||||||||| | || |||   ||||||| ||||| ||||||||||||    
T  15042795 ttggttcgtggacataaacggtgggtggcctgatagcggaaacctgatagcaggtggcccaatgaatcttggagagaggctatgataacatcttagaaat 15042894  T
Q  116 ggtgattgggcctaaca 132  Q
     ||| || |||||||||    
T  15042895 cgtggttaggcctaaca 15042911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 39052672 - 39052741
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcc 76  Q
    |||||||||| ||||||||||||||||||| |||||||| | ||||| ||||||| ||| | ||||||||    
T  39052672 cactattgggcttggttcgtggacataaatggtgggtggccggatagcggaaacctgatagcaggtggcc 39052741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 5589869 - 5589929
Alignment:
Q  1 gactagcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacc 61  Q
    |||||||| ||||||| ||||||||||||||||||| |||||||  ||||||| |||||||    
T  5589869 gactagcattattgggcttggttcgtggacataaattgtgggtgatccgatagcggaaacc 5589929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 132
Target Start/End: Complemental strand, 12317213 - 12317105
Alignment:
Q  24 cgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattg 123  Q
    |||| ||||||||  ||||||| ||||||  ||||||| |||   ||||||||||| | ||  ||||||| |||||||| |||||||||||| ||| |||    
T  12317213 cgtgaacataaatgatgggtggtccgataacggaaacctgataacaggtggcccaaagaatcgtgaagagtctctgataccatcttagaaatcgtggttg 12317114  T
Q  124 ggcctaaca 132  Q
    |||||||||    
T  12317113 ggcctaaca 12317105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 422364 - 422478
Alignment:
Q  18 ttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttg-aagaggctctgatatcatcttagaaatg 116  Q
    |||||||||||||| |||| |||||||| |||| || ||||||| ||| | |||||||||||| ||| |||    ||||||||||| ||||||||||||     
T  422364 ttggttcgtggacaaaaatggtgggtggcccgagagcggaaacctgatagcaggtggcccaac-gatcttgttttaggctctgataccatcttagaaatt 422462  T
Q  117 gtgattgggcctaaca 132  Q
    ||| ||||||| ||||    
T  422463 gtggttgggccaaaca 422478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 132
Target Start/End: Original strand, 31079478 - 31079600
Alignment:
Q  10 tattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatctt 109  Q
    ||||||| |||||||||  |||||||| |||||||| ||||||| ||||| | |||   | |||| |||| |||| ||| ||||| | ||||| ||||||    
T  31079478 tattgggcttggttcgttcacataaatggtgggtggcccgatagtggaaatctgataacatgtggtccaatggatcttgtagaggttttgataccatctt 31079577  T
Q  110 agaaatggtgattgggcctaaca 132  Q
    ||||||  | |||||||||||||    
T  31079578 agaaatctttattgggcctaaca 31079600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 37001381 - 37001285
Alignment:
Q  39 tgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttga---agaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||| ||||||| ||||||| ||  | ||||||||||| |||| ||||   ||||||||||||| |||||| ||||| ||| ||||||||||||    
T  37001381 tgggtggcccgatagcggaaacctgacagcaggtggcccaatggatcttgatgaagaggctctgataccatctttgaaatcgtggttgggcctaaca 37001285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 39960143 - 39960074
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtgg 74  Q
    |||||||||||| ||||||||||||||||||| |||||| |  |||||| ||||||| ||| | ||||||    
T  39960143 agcactattgggcttggttcgtggacataaatggtgggtagctcgatagcggaaacctgatagcaggtgg 39960074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 10614842 - 10614962
Alignment:
Q  10 tattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatctt 109  Q
    ||||||| |||||||||||||| |||| |||| ||  |||||||   ||||  ||| | |||||| |||| |||| ||| ||||||| ||||||||||||    
T  10614842 tattgggcttggttcgtggacacaaatggtggatgttccgatagcaaaaacttgattgcaggtggtccaatggatcttggagaggctatgatatcatctt 10614941  T
Q  110 agaaatggtgattgggcctaa 130  Q
    | |||| ||| ||| ||||||    
T  10614942 ataaatcgtggttgagcctaa 10614962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 132
Target Start/End: Original strand, 19256753 - 19256845
Alignment:
Q  40 gggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    |||||| ||||||  ||||||| |||   ||||||||||| | ||  |||||||||||||||| ||| |||||||| ||| ||||||||||||    
T  19256753 gggtggcccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgggcctaaca 19256845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 125
Target Start/End: Original strand, 8466623 - 8466742
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaa-gaggctctgatatca 105  Q
    |||||||||| ||||| |||| | |||||| ||||||||   ||||| ||||||| ||| | ||||||||||| |||| |||||  | ||| ||||| ||    
T  8466623 cactattgggcttggtgcgtgcatataaatggtgggtggcttgatagcggaaacctgatagcaggtggcccaatggatcttgaaccaagctttgatacca 8466722  T
Q  106 tcttagaaatggtgattggg 125  Q
    |||||||||| ||| |||||    
T  8466723 tcttagaaattgtggttggg 8466742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 26208172 - 26208274
Alignment:
Q  31 ataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgtt-gaagaggctctgatatcatcttagaaatggtgattgggccta 129  Q
    |||||| |||||||| ||| ||| | ||||| ||| | |||||||||||||||| || ||  ||||||||||| |||||||||||| |||  ||| ||||    
T  26208172 ataaatggtgggtggcccgttagggaaaacctgatagcaggtggcccaacggatcttagagaaggctctgataccatcttagaaattgtggatggaccta 26208271  T
Q  130 aca 132  Q
    |||    
T  26208272 aca 26208274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 38476159 - 38476097
Alignment:
Q  71 gtggcccaacggatgttgaag-aggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||||| |||| ||| || ||||||||||| |||||||||||| ||| ||||||||||||    
T  38476159 gtggcccaatggatcttggaggaggctctgataccatcttagaaattgtggttgggcctaaca 38476097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 5675867 - 5675915
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatag 53  Q
    |||||||||||  ||||||||||||||||||| |||||||  |||||||    
T  5675867 agcactattggacttggttcgtggacataaatggtgggtgacccgatag 5675915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 37867968 - 37868020
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaa 59  Q
    |||||||||  ||||||||||||||||||| |||||||| || |||| |||||    
T  37867968 cactattggccttggttcgtggacataaatggtgggtggcccaatagcggaaa 37868020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 13353387 - 13353260
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||||||| ||||||| |||   ||||||||||| |||| ||| ||||||||||||| |    
T  13353387 agcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgatacc 13353288  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||||||| ||||||||||||    
T  13353287 atcttagaaatggtggttgggcctaaca 13353260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 33796512 - 33796385
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||||||| ||||||| |||   ||||||||||| |||| ||| ||||||||||||| |    
T  33796512 agcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgatacc 33796413  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||||||| ||||||||||||    
T  33796412 atcttagaaatggtggttgggcctaaca 33796385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 4868710 - 4868838
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgtt-gaagaggctctgatat 103  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||||||  ||||||| ||| | |||||||||| ||||| || || ||||||||||||     
T  4868710 agcactattgggcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccagcggatcttggaggaggctctgatac 4868809  T
Q  104 catcttagaaatggtgattgggcctaaca 132  Q
    |||||||||||| ||| ||||||||||||    
T  4868810 catcttagaaatcgtggttgggcctaaca 4868838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 33494725 - 33494598
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| |||||||||| |||||||  |||||||| ||||||| ||||||| ||| | ||||| ||||| |||| | ||||||| ||||||| |    
T  33494725 agcactattgggcttggttcgtgaacataaacggtgggtggcccgatagtggaaacctgatagcaggtgacccaatggatctcgaagaggttctgatacc 33494626  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||||||| ||||||||||||    
T  33494625 atcttagaaatggtggttgggcctaaca 33494598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 11 - 132
Target Start/End: Original strand, 12330083 - 12330204
Alignment:
Q  11 attgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatctta 110  Q
    |||||| ||||||||||||||||||| |||||||| ||||| | ||||||| ||| | ||||||||||| |||| ||| ||||||||||||| ||| |||    
T  12330083 attgggcttggttcgtggacataaatggtgggtggcccgatggcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatatta 12330182  T
Q  111 gaaatggtgattgggcctaaca 132  Q
    ||||| ||| ||||||||||||    
T  12330183 gaaatcgtggttgggcctaaca 12330204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 9705205 - 9705079
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaag-aggctctgatat 103  Q
    |||||||||||  ||||||  ||||||||||| |||||||| ||||||  ||||||| ||| | ||||||||||||  || ||| || |||||||||||     
T  9705205 agcactattggacttggtt--tggacataaatggtgggtggcccgataatggaaacctgatagcaggtggcccaacaaatcttggaggaggctctgatac 9705108  T
Q  104 catcttagaaatggtgattgggcctaaca 132  Q
    |||||||||||||||| ||||||||||||    
T  9705107 catcttagaaatggtggttgggcctaaca 9705079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 17147793 - 17147890
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgata 102  Q
    |||||||||||| ||||||||||||||||||| |||||||  | ||||| ||||||| ||| | ||||| ||||| |||||||| |||||||||||||    
T  17147793 agcactattgggcttggttcgtggacataaatggtgggtgacctgatagcggaaacctgatagcaggtgacccaatggatgttggagaggctctgata 17147890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 6542854 - 6542968
Alignment:
Q  18 ttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatgg 117  Q
    ||||||||||||||||||| |||||||  ||||||  ||||||| ||| | | ||| ||||| |||| ||||||||||||||||| |||||| ||||| |    
T  6542854 ttggttcgtggacataaatggtgggtgacccgataacggaaacctgatagcaagtgacccaatggatcttgaagaggctctgataccatctttgaaatcg 6542953  T
Q  118 tgattgggcctaaca 132  Q
    || ||||| ||||||    
T  6542954 tggttgggtctaaca 6542968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 3680196 - 3680071
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    |||||||||| |||||| |||||||||||| |||| ||  ||||||| |||||||  || | ||||| ||| | |||| ||| ||||| ||||||| |||    
T  3680196 cactattgggcttggtttgtggacataaatggtggatgacccgatagcggaaacctaatagcaggtgacccgatggattttggagagggtctgataccat 3680097  T
Q  107 cttagaaatggtgattgggcctaaca 132  Q
    ||||||||| ||| ||||||||||||    
T  3680096 cttagaaattgtggttgggcctaaca 3680071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 31961133 - 31961028
Alignment:
Q  1 gactagcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctga 100  Q
    |||||| ||||||||| ||||| ||||||||||||| ||||| ||  ||||||  |||||| ||| | ||||||||||| |||| ||| |||||||||||    
T  31961133 gactagtactattgggcttggtccgtggacataaatggtggggggcacgatagcagaaacctgatagcaggtggcccaatggatcttggagaggctctga 31961034  T
Q  101 tatcat 106  Q
    ||||||    
T  31961033 tatcat 31961028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 6237617 - 6237732
Alignment:
Q  17 tttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatg 116  Q
    |||||||||||||||||||| |||||||| ||||||| ||||||| | | | | |||| |||| |||| |||||||| |||| ||| |||||||||| |     
T  6237617 tttggttcgtggacataaatggtgggtggtccgatagcggaaacctggtagcaagtggtccaatggatcttgaagagactctaataccatcttagaagtc 6237716  T
Q  117 gtgattgggcctaaca 132  Q
    ||||||| | ||||||    
T  6237717 gtgattgagtctaaca 6237732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 126
Target Start/End: Original strand, 6400753 - 6400873
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||||||||||||| |||||||| |||||||  |||||| ||| | ||||| ||| |  ||| ||| ||||||| ||||| |    
T  6400753 agcactattgggcttggttcgtggacataaatggtgggtggtccgatagcagaaacctgatagcaggtgaccc-atagattttggagaggctttgatacc 6400851  T
Q  105 atcttagaaatggtgattgggc 126  Q
    |||||| |||| ||| ||||||    
T  6400852 atcttaaaaatcgtggttgggc 6400873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 19712838 - 19712775
Alignment:
Q  69 aggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| | ||  |||||||||||||||| |||||||||||||||| ||||||||||||    
T  19712838 aggtggcccaaagaatcgtgaagaggctctgataccatcttagaaatggtggttgggcctaaca 19712775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 6054345 - 6054228
Alignment:
Q  15 ggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaa 114  Q
    |||||||||| ||||||||||  || ||||  || |||| ||||||| ||| | |||||||| || | || ||||||||| |||||||||||||||||||    
T  6054345 ggtttggttcatggacataaacggtcggtgatccaatagcggaaacctgatagcaggtggcctaatgaatcttgaagaggttctgatatcatcttagaaa 6054246  T
Q  115 tggtgattgggcctaaca 132  Q
    | ||| ||| | ||||||    
T  6054245 tcgtggttgagtctaaca 6054228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 132
Target Start/End: Complemental strand, 11085724 - 11085640
Alignment:
Q  48 cgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    |||||| ||||||| ||| | ||||||||||||| || ||| ||||||||| | | |||||||||||| |||||||| |||||||    
T  11085724 cgatagcggaaacctgatagcaggtggcccaacgtatcttggagaggctctaaaaccatcttagaaatcgtgattggacctaaca 11085640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 32290914 - 32290787
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||| ||||||| ||| || |||||||||||| |||||||| ||||||| | ||| | ||| | ||||||||| | |||| ||| ||| ||||| ||| |    
T  32290914 agcattattgggcttgatttgtggacataaatggtgggtggcccgatagcgaaaatctgatagtaggtggcccgatggatattggagatgctctaatacc 32290815  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||  || |||||||||    
T  32290814 atcttagaaatcgttgtttggcctaaca 32290787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 8001497 - 8001575
Alignment:
Q  55 ggaaacccgatggaaggtggcccaacggatgttgaag-aggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||| ||| | |||||||||||||||| || ||| || |||||||| |||||||||||| ||| ||||||||||||    
T  8001497 ggaaacctgatagcaggtggcccaacggatctttaaggagactctgataccatcttagaaattgtggttgggcctaaca 8001575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 33631703 - 33631813
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||| | |||||| |||||||||||| |||||||  |||||||  |||||| |||   ||||| |||||  ||| ||| ||| |||||||||||    
T  33631703 agcactattgagcttggttagtggacataaatggtgggtgtcccgatagcagaaacctgatatcaggtgacccaatagatcttggagatgctctgatatc 33631802  T
Q  105 atcttagaaat 115  Q
    |||||| ||||    
T  33631803 atcttaaaaat 33631813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 8026511 - 8026448
Alignment:
Q  69 aggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||||  ||  |||||||||||||||| ||| |||||||| ||| ||||||||||||    
T  8026511 aggtggcccaacaaatcgtgaagaggctctgataccatattagaaatcgtggttgggcctaaca 8026448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 15082059 - 15082169
Alignment:
Q  24 cgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaa-cggatgtt-gaagaggctctgatatcatcttagaaatggtgat 121  Q
    |||| |||||||| |||||||| ||||||  ||||||| ||| | |||||| |||| ||||| || || |||| ||||||| ||| |||||||| ||| |    
T  15082059 cgtgaacataaatggtgggtggcccgataatggaaacctgatagcaggtggtccaaacggatcttagaggaggttctgataccatattagaaatcgtgtt 15082158  T
Q  122 tgggcctaaca 132  Q
    |||||||||||    
T  15082159 tgggcctaaca 15082169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 119
Target Start/End: Original strand, 1788928 - 1788961
Alignment:
Q  86 ttgaagaggctctgatatcatcttagaaatggtg 119  Q
    ||||||||||||||||| ||||||||||||||||    
T  1788928 ttgaagaggctctgataccatcttagaaatggtg 1788961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 2736318 - 2736427
Alignment:
Q  24 cgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaag-aggctctgatatcatcttagaaatggtgatt 122  Q
    |||||||||||||  ||||||| ||||||  |||||||  || | |||||||||||  ||| |||||  ||||||||||||||| |||||||| ||| ||    
T  2736318 cgtggacataaatgatgggtggtccgataacggaaacctaatagcaggtggcccaatagatcttgaatcaggctctgatatcattttagaaatcgtggtt 2736417  T
Q  123 gggcctaaca 132  Q
     ||| |||||    
T  2736418 aggcttaaca 2736427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 27653321 - 27653276
Alignment:
Q  87 tgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    |||||||||||||||| ||| |||||||| ||| ||||||||||||    
T  27653321 tgaagaggctctgataccatattagaaatcgtggttgggcctaaca 27653276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 5e-34; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 33834375 - 33834250
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    |||||||||| ||||||||||||||||||| |||||||| ||||||| | ||||| ||| | ||||||||||| |||| ||| ||||||||||||| |||    
T  33834375 cactattgggcttggttcgtggacataaatggtgggtggcccgatagggaaaacctgatagcaggtggcccaatggatcttggagaggctctgataccat 33834276  T
Q  107 cttagaaatggtgattgggcctaaca 132  Q
    ||||||||||||| ||||||||||||    
T  33834275 cttagaaatggtggttgggcctaaca 33834250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 21861480 - 21861353
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    ||||||||| || ||||||||||||||||||| |||||||| ||||||| ||||||| |||   ||||||||||| |||| ||| ||||||||||||| |    
T  21861480 agcactattaggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgatacc 21861381  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||||||| ||||||||||||    
T  21861380 atcttagaaatggtggttgggcctaaca 21861353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 36277124 - 36277251
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||||||| ||||||| ||| | ||||||||||| |||| ||| ||||||||||||| |    
T  36277124 agcactattgggcttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagtaggtggcccaatggatcttggagaggctctgataac 36277223  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||| ||||| ||||||    
T  36277224 atcttagaaatcgtggttgggactaaca 36277251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 25620320 - 25620195
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    |||||||||| ||||||||||||||||||| |||||||| || |||| ||||||| ||| | ||||||||||| |||| ||| ||||||||||||| |||    
T  25620320 cactattgggcttggttcgtggacataaatggtgggtggcccaatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccat 25620221  T
Q  107 cttagaaatggtgattgggcctaaca 132  Q
    ||||||||| ||| ||||||||||||    
T  25620220 cttagaaatcgtggttgggcctaaca 25620195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 1596779 - 1596652
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||||||| ||||||| |||   | ||||||||| |||| ||| ||||||||||||| |    
T  1596779 agcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacatgtggcccaatggatcttggagaggctctgatacc 1596680  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||| || |||||||||    
T  1596679 atcttagaaattgtggttaggcctaaca 1596652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 29469791 - 29469664
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||| ||||||||||||||| |||||||| ||||||| |||| || |||   ||||||||||| |||| ||| ||||||||||||| |    
T  29469791 agcactattgggcttgattcgtggacataaatggtgggtggcccgatagcggaagcctgataacaggtggcccaatggatcttggagaggctctgatacc 29469692  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    || |||||||| ||| ||||||||||||    
T  29469691 atattagaaatcgtggttgggcctaaca 29469664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 33996214 - 33996336
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    |||||||||| ||||||||||||||||||| |||||||| ||||| | ||||||| ||| | ||||||||||| |||   || ||||||||||||| |||    
T  33996214 cactattgggcttggttcgtggacataaatggtgggtggcccgattgcggaaacctgatagcaggtggcccaatgga---tggagaggctctgataccat 33996310  T
Q  107 cttagaaatggtgattgggcctaaca 132  Q
    ||||||||| ||| ||||||||||||    
T  33996311 cttagaaatcgtggttgggcctaaca 33996336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 48661455 - 48661580
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    |||||||||| ||||||||||||||||||| |||||||| |||| || ||||||| ||| | ||||||| ||| || | || ||||||||||||||||||    
T  48661455 cactattgggcttggttcgtggacataaatggtgggtggcccgaaagcggaaacctgatagcaggtggctcaatggttcttaaagaggctctgatatcat 48661554  T
Q  107 cttagaaatggtgattgggcctaaca 132  Q
     |||||||| ||| ||||| ||||||    
T  48661555 attagaaatcgtggttgggtctaaca 48661580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 31485559 - 31485684
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    |||||||||||||| |||||||| |||||| |||||||| ||||||| | ||||| ||| | ||||||||||| |||| ||| || |||||| ||| |||    
T  31485559 cactattgggtttgattcgtggatataaatggtgggtggcccgatagtgaaaacctgatagtaggtggcccaatggatcttgtagcggctcttataccat 31485658  T
Q  107 cttagaaatggtgattgggcctaaca 132  Q
    ||||||||| ||| || |||||||||    
T  31485659 cttagaaattgtggttaggcctaaca 31485684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 132
Target Start/End: Complemental strand, 4886512 - 4886388
Alignment:
Q  8 actattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatc 107  Q
    ||||||||| ||||||||||||||||||| ||||||||  ||||||  |||||  ||| | ||||||||||| |||| ||| |||| | |||||| ||||    
T  4886512 actattgggcttggttcgtggacataaatggtgggtggctcgatagtagaaacttgatagcaggtggcccaatggatcttggagagaccctgataccatc 4886413  T
Q  108 ttagaaatggtgattgggcctaaca 132  Q
    |||||||| ||| ||||||||||||    
T  4886412 ttagaaatcgtggttgggcctaaca 4886388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 131
Target Start/End: Complemental strand, 22574785 - 22574661
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    |||||||||| ||||||||| ||||||||| |||||||| |||||||  |||||| ||| | ||||||||||| |||| ||| |||| |||| ||| |||    
T  22574785 cactattgggcttggttcgtagacataaatggtgggtggtccgatagctgaaacctgatagcaggtggcccaatggatcttggagagactcttataccat 22574686  T
Q  107 cttagaaatggtgattgggcctaac 131  Q
    | ||||||| ||| ||| |||||||    
T  22574685 catagaaattgtggttgagcctaac 22574661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 2404306 - 2404433
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||| | ||||||||||||||||||  || ||||| || |||| ||||||| ||| | ||||| ||||| |||| | ||||||||||||||| |    
T  2404306 agcactattgcgcttggttcgtggacataaacggtaggtggtccaatagcggaaacctgatagcaggtgacccaatggatttcgaagaggctctgatacc 2404405  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||| ||| || |||||    
T  2404406 atcttagaaatcgtggttgagcttaaca 2404433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 3519937 - 3520064
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||||||||||||| |||||||  ||||||| | ||||| ||| | ||||||||||| ||||  || ||||||||||||| |    
T  3519937 agcactattgggcttggttcgtggacataaatggtgggtgtcccgatagcgaaaaccagatagcaggtggcccaatggatcatggagaggctctgatacc 3520036  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    | || |||||| ||| |||  |||||||    
T  3520037 aactaagaaatcgtggttgaacctaaca 3520064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 132
Target Start/End: Original strand, 44874481 - 44874603
Alignment:
Q  10 tattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatctt 109  Q
    ||||||||||||||||| |||||||||  ||||||  ||||| | ||||||| ||| | ||||| ||||| |||| |||||||| |||||||| ||||||    
T  44874481 tattgggtttggttcgtagacataaatgatgggtgacccgattgtggaaacctgatagcaggtgacccaatggatcttgaagagactctgataccatctt 44874580  T
Q  110 agaaatggtgattgggcctaaca 132  Q
    ||| || ||| || |||||||||    
T  44874581 agacattgtggtttggcctaaca 44874603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 9689005 - 9689127
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    |||||||||| ||||||||||| |||||||||||||||| |    || ||||||| ||| | |||||| |||| |||| ||| ||||||||||||| |||    
T  9689005 cactattgggcttggttcgtgg-cataaatcgtgggtggcc----agcggaaacctgatagcaggtggtccaatggatcttggagaggctctgataccat 9689099  T
Q  107 cttagaaatggtgattgggcctaacaaa 134  Q
     | |||||| ||| ||||||||||||||    
T  9689100 atcagaaattgtggttgggcctaacaaa 9689127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 36993206 - 36993316
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    ||||||||||   ||| |||||| |||||||| |||||||| || |||| ||||| | ||| | | ||||||||| |||| ||||||||||||||||| |    
T  36993206 agcactattgaacttgattcgtgaacataaatagtgggtggtccaatagcggaaatctgatagcacgtggcccaatggatcttgaagaggctctgatacc 36993305  T
Q  105 atcttagaaat 115  Q
    |||||||||||    
T  36993306 atcttagaaat 36993316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 18826392 - 18826496
Alignment:
Q  11 attgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatctta 110  Q
    |||||| ||||||||||| ||||||| ||||||||  |||||| |||||   ||| | || |||| ||  |||| |||||||||||||||||||||||||    
T  18826392 attgggcttggttcgtggtcataaatggtgggtggctcgatagcggaaatttgatagcagatggctcagtggatcttgaagaggctctgatatcatctta 18826491  T
Q  111 gaaat 115  Q
    |||||    
T  18826492 gaaat 18826496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 21821925 - 21821865
Alignment:
Q  72 tggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    |||||||||| || ||||||||||||||||| |||||||||||| ||| ||||||||||||    
T  21821925 tggcccaacgtatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaaca 21821865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 132
Target Start/End: Complemental strand, 31892333 - 31892210
Alignment:
Q  10 tattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatctt 109  Q
    ||||||| ||||||||||||||||||| |||||||| | ||||  ||||||| ||| | |||||||||||  | | ||| ||||||||||||  ||||||    
T  31892333 tattgggcttggttcgtggacataaatggtgggtggcctgataacggaaacctgatagcaggtggcccaataggtcttggagaggctctgattccatctt 31892234  T
Q  110 agaaat-ggtgattgggcctaaca 132  Q
    ||| || || | ||||||||||||    
T  31892233 agagatcggggtttgggcctaaca 31892210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 2315161 - 2315233
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaa 79  Q
    |||||||||| ||||||||||||||||||| |||||||| ||||| | ||||| | ||| | |||||||||||    
T  2315161 cactattgggcttggttcgtggacataaatggtgggtggtccgattgcggaaatctgatagcaggtggcccaa 2315233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 3519858 - 3519914
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacc 61  Q
    |||| ||||||| ||||||||||||||||||| |||||||| ||||||| |||||||    
T  3519858 agcattattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacc 3519914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 125
Target Start/End: Original strand, 5871850 - 5871974
Alignment:
Q  2 actagcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaag-aggctctga 100  Q
    ||||||||||||| ||||||||||| ||||||||| || ||| | ||||||| |||||   ||| | ||||| | ||| |||| || | | |||||||||    
T  5871850 actagcactattgagtttggttcgttgacataaatggtaggtcgtccgatagcggaaatatgatagcaggtgactcaatggatcttaacgcaggctctga 5871949  T
Q  101 tatcatcttagaaatggtgattggg 125  Q
    ||||||||||||||| ||| |||||    
T  5871950 tatcatcttagaaatcgtggttggg 5871974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 20305467 - 20305366
Alignment:
Q  18 ttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggc----ccaacggatgttgaagaggctctgatatcatcttagaa 113  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||| ||| | || || |    |||| |||| ||||||||||||||||| ||||||| ||    
T  20305467 ttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcagatgacccatccaatggatcttgaagaggctctgataccatcttaaaa 20305368  T
Q  114 at 115  Q
    ||    
T  20305367 at 20305366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 10882201 - 10882264
Alignment:
Q  69 aggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| | ||  |||||||||||||||| |||||||||||| ||| ||||||||||||    
T  10882201 aggtggcccaaagaatcgtgaagaggctctgataccatcttagaaatcgtggttgggcctaaca 10882264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 28080786 - 28080731
Alignment:
Q  69 aggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgg 124  Q
    |||||||||||  ||| |||||||||||||||||||||||||||||| ||| ||||    
T  28080786 aggtggcccaatagatcttgaagaggctctgatatcatcttagaaatcgtggttgg 28080731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 40746165 - 40746240
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaac 80  Q
    |||||||||||| ||||||||||||||||||| ||||||||  |||||  | ||||| ||| | ||||||||||||    
T  40746165 agcactattgggcttggttcgtggacataaatggtgggtggttcgataacgaaaacctgatagcaggtggcccaac 40746240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 26239863 - 26239941
Alignment:
Q  55 ggaaacccgatggaaggtggcccaacggatgttgaag-aggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||| ||| | |||||||||||||||| ||| || ||||||||||| |||||||||||| ||| ||||| ||||||    
T  26239863 ggaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaattgtggttgggtctaaca 26239941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 30727254 - 30727327
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaac 80  Q
    |||||||||| || ||| ||||| |||||| |||||||| || |||| ||||||| ||| ||||||||||||||    
T  30727254 cactattgggcttagtttgtggatataaatggtgggtggcccaatagcggaaacctgatagaaggtggcccaac 30727327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 3038058 - 3038109
Alignment:
Q  81 ggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    |||| |||||||||||||||||| |||||||||||  || ||||||||||||    
T  3038058 ggatcttgaagaggctctgatattatcttagaaatcatggttgggcctaaca 3038109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 22339503 - 22339628
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaag-aggctctgatatca 105  Q
    |||||||||| || |||||||||||| ||| |||| |||| |||||||| ||||| | | | |||||| |||| |||| || | | ||||||||||| ||    
T  22339503 cactattgggctttgttcgtggacattaatggtgg-tgggtcgatagagaaaacctggtagcaggtggtccaatggatcttaacggaggctctgatacca 22339601  T
Q  106 tcttagaaatggtgattgggcctaaca 132  Q
    | |||||||| ||  ||||||||||||    
T  22339602 tattagaaattgtcgttgggcctaaca 22339628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 132
Target Start/End: Original strand, 5871796 - 5871837
Alignment:
Q  91 gaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||    
T  5871796 gaggctctgatatcatcttagaaatcgtggttgggactaaca 5871837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 34027544 - 34027452
Alignment:
Q  40 gggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    |||||| ||||||  ||||||| |||   ||||||||||| | ||  |||||||||||| ||| ||| |||||||| ||| ||||||||||||    
T  34027544 gggtggcccgataatggaaacctgataacaggtggcccaaagaatcgtgaagaggctctaataccatattagaaatcgtggttgggcctaaca 34027452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 40121909 - 40121949
Alignment:
Q  92 aggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| |||||||||||| ||| ||||||||||||    
T  40121909 aggctctgataccatcttagaaatcgtggttgggcctaaca 40121949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 5652 - 5779
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||||||| ||||||| ||| | ||||||| ||| |||| ||| ||||||||||||| |    
T  5652 agcactattgggcttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtggctcaatggatcttggagaggctctgatacc 5751  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||| ||||||||||||    
T  5752 atcttagaaatcgtggttgggcctaaca 5779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 7e-33; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 95399 - 95526
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||||| | ||||||| ||| | ||||||||||| |||| ||| ||||||||||||| |    
T  95399 agcactattgggcttggttcgtggacataaatggtgggtggcccgatggcggaaacctgatagcaggtggcccaatggatcttggagaggctctgatacc 95498  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||| ||||||||||||    
T  95499 atcttagaaatcgtggttgggcctaaca 95526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 41666890 - 41667018
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgtt-gaagaggctctgatat 103  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||||||  ||||||| ||| | |||||||||||||||| || || ||||||||||||     
T  41666890 agcactattgggcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaacggatcttggaggaggctctgatac 41666989  T
Q  104 catcttagaaatggtgattgggcctaaca 132  Q
    |||||||||||| ||| ||||||||||||    
T  41666990 catcttagaaatcgtggttgggcctaaca 41667018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 9368781 - 9368654
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    ||||||||||||||||||||||||||||| || |||||||| || |||| ||||||| ||| | ||||||||||| |||| ||||||||||||||||| |    
T  9368781 agcactattgggtttggttcgtggacatacatggtgggtggtccaatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgatacc 9368682  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    | |||||||||  || ||||||||||||    
T  9368681 accttagaaattatggttgggcctaaca 9368654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 15480508 - 15480381
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    ||||| ||| || ||||||| ||||||||||| |||||||| || |||| ||||||| ||| | ||||||||||| |||| ||||||||||||||||| |    
T  15480508 agcacgattaggcttggttcatggacataaatggtgggtggcccaatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctgatacc 15480409  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||| ||||||||||||    
T  15480408 atcttagaaatcgtggttgggcctaaca 15480381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 18333597 - 18333724
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    ||||||| |||| ||||||||||||||||||| |||||||| ||||||| | ||||| ||| | ||||||||| | |||| ||||||||||||||||| |    
T  18333597 agcactaatgggcttggttcgtggacataaatggtgggtggcccgatagcgaaaacctgatagcaggtggcccgatggatcttgaagaggctctgatacc 18333696  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||| | ||| ||||||||||||    
T  18333697 atcttagaattcgtggttgggcctaaca 18333724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 32908850 - 32908977
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||||||||||||| ||||||||| |||||||  |||||||  |||||| ||| | || |||||||| |||| ||||||||||||| |||||    
T  32908850 agcactattgggtttggttcgttgacataaatggtgggtgacccgatagcagaaacctgatagcagatggcccaatggatcttgaagaggctctaatatc 32908949  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||| ||| | ||||||    
T  32908950 atcttagaaattgtggttgagtctaaca 32908977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 25258199 - 25258309
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||| |||| || ||||||||||||||||||| |||||||| ||||||| ||||||| ||| | ||||||||||| |||| ||| ||| ||||||||| |    
T  25258199 agcattatttggcttggttcgtggacataaattgtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttggagaagctctgatacc 25258298  T
Q  105 atcttagaaat 115  Q
    |||||||||||    
T  25258299 atcttagaaat 25258309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 25321989 - 25322099
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||| |||| || ||||||||||||||||||| |||||||| ||||||| ||||||| ||| | ||||||||||| |||| ||| ||| ||||||||| |    
T  25321989 agcattatttggcttggttcgtggacataaattgtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatcttggagaagctctgatacc 25322088  T
Q  105 atcttagaaat 115  Q
    |||||||||||    
T  25322089 atcttagaaat 25322099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 17150368 - 17150493
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    |||||||||  ||||||  ||||||||||| |||||||| ||||||| ||||||| ||| | ||||||||||| |||| ||||||||||||||||| |||    
T  17150368 cactattggtattggtttctggacataaatggtgggtggcccgatagcggaaacctgatagtaggtggcccaatggatcttgaagaggctctgataccat 17150467  T
Q  107 cttagaaatggtgattgggcctaaca 132  Q
    |||| |||| ||  ||| ||||||||    
T  17150468 cttaaaaatcgtagttgagcctaaca 17150493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 24346634 - 24346762
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgtt-gaagaggctctgatat 103  Q
    |||||||||| | ||||||||||||||||||| |||||||| ||||||  ||||||| ||| | ||||||||||| |||| || || ||||||||||||     
T  24346634 agcactattgagcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaatggatcttggaggaggctctgatac 24346733  T
Q  104 catcttagaaatggtgattgggcctaaca 132  Q
    ||||||| |||| ||| ||||| ||||||    
T  24346734 catcttaaaaatcgtggttgggtctaaca 24346762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 43117831 - 43117706
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    |||||||| | |||||||||||||||||||  ||||||| ||||||| ||||||| ||| | |||||||||||  ||| ||| | |||||||||||  ||    
T  43117831 cactattgagcttggttcgtggacataaatgatgggtggtccgatagcggaaacctgatagcaggtggcccaatagatcttggaaaggctctgatactat 43117732  T
Q  107 cttagaaatggtgattgggcctaaca 132  Q
    ||||||||| ||  ||||||||||||    
T  43117731 cttagaaatcgttgttgggcctaaca 43117706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 124
Target Start/End: Original strand, 24270003 - 24270123
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgtt-gaagaggctctgatat 103  Q
    |||||||||| | ||||||||||||||||||| |||||||| ||||||  ||||||| ||| | ||||||||||| |||| || || ||||||||||||     
T  24270003 agcactattgagcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaatggatcttggaggaggctctgatac 24270102  T
Q  104 catcttagaaatggtgattgg 124  Q
    ||||||| |||| ||| ||||    
T  24270103 catcttaaaaatcgtggttgg 24270123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 6919327 - 6919454
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||||||||||||| ||| |||| |||| || ||||||| ||| | || || | ||| |||| ||||||||||| ||||| |    
T  6919327 agcactattgggcttggttcgtggacataaatggtgagtggtccgaaagcggaaacctgatagcagatgactcaatggatcttgaagaggctttgatacc 6919426  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    |||||| |||| ||| ||| ||||||||    
T  6919427 atcttaaaaatcgtggttgagcctaaca 6919454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 17352567 - 17352693
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||| ||||||| ||||||||||||||||||  || ||||  || |||| ||||||| ||| | | ||||| ||| |||| ||||||||||||||||| |    
T  17352567 agcattattgggcttggttcgtggacataaacggtaggtgacccaatagcggaaacctgatagcaagtggctcaa-ggatcttgaagaggctctgatacc 17352665  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||||||| |||| |||||||    
T  17352666 atcttagaaatggtggttggacctaaca 17352693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 6413568 - 6413665
Alignment:
Q  18 ttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaat 115  Q
    ||||||||||||||||||| ||||||||  |||||| ||| ||| ||| | ||||||||||| |||| ||||||||||| ||||| ||| ||||||||    
T  6413568 ttggttcgtggacataaatggtgggtggctcgatagtggatacctgatagcaggtggcccaatggatcttgaagaggctttgataccatattagaaat 6413665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 8081247 - 8081344
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgata 102  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||||||| ||| ||| ||| | |||||||||||  ||| ||| ||| |||||||||    
T  8081247 agcactattgggcttggttcgtggacataaatggtgggtggtccgataggggatacctgatagcaggtggcccaatcgatcttggagaagctctgata 8081344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 26137238 - 26137370
Alignment:
Q  1 gactagcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaag-aggctctg 99  Q
    |||||||| ||||||  |||||||||||||||||||  ||||||| ||||| | | ||||| ||| | ||||||||||||  || ||| || ||||||||    
T  26137238 gactagcattattggacttggttcgtggacataaatgatgggtggcccgatggtgaaaacctgatagcaggtggcccaacaaatcttggagtaggctctg 26137337  T
Q  100 atatcatcttagaaatggtgattgggcctaaca 132  Q
    ||| || ||||||||| ||| ||||||||||||    
T  26137338 ataccaccttagaaatcgtggttgggcctaaca 26137370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 24531785 - 24531658
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| |||||||||||||||||||  |||||||  |||||   |||| | ||| | ||||||||||| ||||  |  ||||||||||||| |    
T  24531785 agcactattgggcttggttcgtggacataaatgttgggtggttcgataacagaaaactgatagcaggtggcccaatggatcatagagaggctctgatacc 24531686  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||| |||||| |||||    
T  24531685 atcttagaaatcgtggttgggcataaca 24531658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 13700725 - 13700815
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctc 97  Q
    |||||||||||||||||||||  ||||||| |||||||| | ||||| ||||||| ||| | ||||| ||||| |||| ||||||||||||    
T  13700725 cactattgggtttggttcgtgatcataaatggtgggtggcctgatagcggaaacctgatagcaggtgacccaatggatcttgaagaggctc 13700815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 11896302 - 11896386
Alignment:
Q  18 ttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgata 102  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||| ||| | ||||||| ||| |||| ||| ||||| |||||||    
T  11896302 ttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagtaggtggcacaatggatcttggagaggttctgata 11896386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 115
Target Start/End: Original strand, 16704618 - 16704726
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    |||||||||| |||||||||||||||||||  || |||  |||||||  |||||  ||| | |||| |||||| |||| ||||||| |||||||||||||    
T  16704618 cactattgggcttggttcgtggacataaatgatgagtgacccgatagctgaaacatgatagcaggtagcccaaaggatattgaagaagctctgatatcat 16704717  T
Q  107 cttagaaat 115  Q
     ||||||||    
T  16704718 tttagaaat 16704726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 15590124 - 15590050
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaa 79  Q
    |||||||||||||||||||||||||||||||| ||| || | ||||||| ||||||  ||| | |||||||||||    
T  15590124 agcactattgggtttggttcgtggacataaatggtgagtagcccgatagcggaaacttgatagcaggtggcccaa 15590050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 2062049 - 2062102
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaac 60  Q
    |||||||||||||||||||||||||||||| |||| ||| ||||||| ||||||    
T  2062049 cactattgggtttggttcgtggacataaatggtggatggcccgatagcggaaac 2062102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 2063703 - 2063759
Alignment:
Q  76 ccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    |||| |||| ||||||||||||||||| |||||||||||| ||| ||||||||||||    
T  2063703 ccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaaca 2063759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 33337371 - 33337427
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacc 61  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||||| | |||||||    
T  33337371 agcactattgggcttggttcgtggacataaatggtgggtggcccgatggcggaaacc 33337427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 38731735 - 38731863
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggcc-gatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatat 103  Q
    |||||||||||| ||||||| |||||||||||  ||||||  |  |||||  |||||| ||| | |||| || ||| | || ||||||||||| |||||     
T  38731735 agcactattgggcttggttcatggacataaatgatgggtgcccgtgatagcagaaacctgatagcaggtagctcaatgaattttgaagaggctatgatag 38731834  T
Q  104 catcttagaaatggtgattgggcctaaca 132  Q
    |||||||||||||||| ||| ||||||||    
T  38731835 catcttagaaatggtggttgtgcctaaca 38731863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 17016010 - 17016064
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacc 61  Q
    |||||||||  ||||||||||||||||||| |||||||| ||||||| |||||||    
T  17016010 cactattggacttggttcgtggacataaatggtgggtggtccgatagcggaaacc 17016064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 29909701 - 29909746
Alignment:
Q  87 tgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||||||| |||| |||||||||||| ||||||||||||    
T  29909701 tgaagaggctctgatgtcatattagaaatggtggttgggcctaaca 29909746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 115
Target Start/End: Original strand, 20510777 - 20510884
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    |||||||||| ||||||||||||||||||| | |||||| || ||||  |||||| ||| | |||| |||||  |||| ||| ||| ||||||||| |||    
T  20510777 cactattgggcttggttcgtggacataaat-gggggtggcccaatagcagaaacctgatagcaggtagcccagtggatcttggagacgctctgataccat 20510875  T
Q  107 cttagaaat 115  Q
    |||| ||||    
T  20510876 cttaaaaat 20510884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 30770186 - 30770230
Alignment:
Q  9 ctattgggtttggttcgtggacataaatcgtgggtgggccgatag 53  Q
    |||||||| ||||||||||||||||||| |||||||| |||||||    
T  30770186 ctattgggcttggttcgtggacataaatggtgggtggcccgatag 30770230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 13296794 - 13296731
Alignment:
Q  69 aggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| | ||  ||||||||||| |||| |||||||||||| ||| ||||||||||||    
T  13296794 aggtggcccaaagaatcgtgaagaggctccgataccatcttagaaatcgtggttgggcctaaca 13296731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 11896050 - 11896088
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgg 45  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  11896050 cactattgggtttggttcgcggacataaatggtgggtgg 11896088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 132
Target Start/End: Original strand, 1564551 - 1564592
Alignment:
Q  91 gaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||    
T  1564551 gaggctctgatatcatcttagaaatcgtggttgagcctaaca 1564592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 1028383 - 1028423
Alignment:
Q  92 aggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||| |||||||||||| ||||||||||||    
T  1028383 aggctctgataccatgttagaaatggtggttgggcctaaca 1028423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 8098468 - 8098376
Alignment:
Q  40 gggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    |||||| ||||||  ||||||| |||   ||||||||||| | ||  |||||||||||||||| ||| |||||||| ||| |||||| |||||    
T  8098468 gggtggcccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgggcttaaca 8098376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 18885413 - 18885365
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatag 53  Q
    |||||||||||| ||||||| | ||||||||| |||||||| |||||||    
T  18885413 agcactattgggcttggttcatagacataaatggtgggtggtccgatag 18885365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 132
Target Start/End: Complemental strand, 20225224 - 20225100
Alignment:
Q  8 actattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatc 107  Q
    ||||||| |||||||| ||||| |||||| || ||  | |||| |  ||||||| ||| | | ||||| ||| |||| ||||||||||| |||||||||     
T  20225224 actattgagtttggtttgtggatataaatagtagggtgcccgaaaacggaaaccagatagtaagtggcacaatggatcttgaagaggctatgatatcatt 20225125  T
Q  108 ttagaaatggtgattgggcctaaca 132  Q
    |||||||| ||| |||  |||||||    
T  20225124 ttagaaatcgtggttgaacctaaca 20225100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 34327571 - 34327519
Alignment:
Q  9 ctattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacc 61  Q
    |||||| ||||||||||||||||||||| |||||||   |||||| |||||||    
T  34327571 ctattgagtttggttcgtggacataaatggtgggtgactcgatagtggaaacc 34327519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 7e-33; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 22231206 - 22231333
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||||||||||||| || ||||| ||||||| ||||||| ||| | ||||||||||| |||| ||| ||||||||||||| |    
T  22231206 agcactattgggcttggttcgtggacataaatggtaggtggcccgatagcggaaacctgatagcaggtggcccaatggattttggagaggctctgatacc 22231305  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||| ||||||||||||    
T  22231306 atcttagaaatcgtggttgggcctaaca 22231333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 40717339 - 40717466
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    ||||||||| || |||||| |||||||||||| |||||||| ||||||| ||||||| ||||| ||||||||||| |||| ||| ||||||||||||| |    
T  40717339 agcactattaggcttggtttgtggacataaatggtgggtggtccgatagcggaaacctgatggcaggtggcccaatggatattggagaggctctgatacc 40717438  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||| ||||||||||||    
T  40717439 atcttagaaatcgtggttgggcctaaca 40717466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 28245659 - 28245782
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||||||| ||||||| ||| | ||||||||||| |||| ||| ||||||||||||| |    
T  28245659 agcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgatacc 28245758  T
Q  105 atcttagaaatggtgattgggcct 128  Q
    || |||||||| ||| ||||||||    
T  28245759 atattagaaatcgtggttgggcct 28245782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 35788846 - 35788718
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgtt-gaagaggctctgatat 103  Q
    |||||||||||| ||||||||||||||||||| |||||||| | ||||  ||||||| ||| | |||||||||||||||| || || ||||||||||||     
T  35788846 agcactattgggcttggttcgtggacataaatggtgggtggcctgataacggaaacctgatagcaggtggcccaacggatcttggaggaggctctgatac 35788747  T
Q  104 catcttagaaatggtgattgggcctaaca 132  Q
    |||||||||||| ||| ||||||||||||    
T  35788746 catcttagaaatcgtggttgggcctaaca 35788718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 35796875 - 35797002
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| |||||||||||| |||||| |||||||| ||||||| ||||||| ||| | |||| | |||| |||| | ||||||||||||||| |    
T  35796875 agcactattgggcttggttcgtggagataaatggtgggtggcccgatagcggaaacctgatagcaggtagtccaatggatctcgaagaggctctgatacc 35796974  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||||||  |||||| |||||    
T  35796975 atcttagaaatggtagttgggcttaaca 35797002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 50543465 - 50543592
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggccca--acggatgttgaagaggctctgatatc 104  Q
    |||||||||| ||||||||||||||||||| |||||||| ||||||  ||||||| ||| | |||||| | |  | |||| ||| |||||||||||||||    
T  50543465 cactattgggcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggtcaaatatggatcttggagaggctctgatatc 50543564  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||| ||||||||||||    
T  50543565 atcttagaaatcgtggttgggcctaaca 50543592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 35819026 - 35819153
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||||||||||||| |||||||  ||||||| ||||||| ||| | ||||||||||| |||| ||  |||| |||||||  |    
T  35819026 agcactattgggcttggttcgtggacataaatggtgggtgacccgatagcggaaacctgatagcaggtggcccaatggatcttagagagactctgatgcc 35819125  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    |||||| |||| ||| ||||||||||||    
T  35819126 atcttaaaaatcgtggttgggcctaaca 35819153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 4905651 - 4905763
Alignment:
Q  22 ttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgat 121  Q
    |||||| |||||||| |||||||| |||||||  ||||||  || | ||||||||||| |||  ||| ||||||||||||||||||||||||||  || |    
T  4905651 ttcgtgaacataaatggtgggtggcccgatagcagaaacctaatagcaggtggcccaatggagcttggagaggctctgatatcatcttagaaatcatggt 4905750  T
Q  122 tgggcctaacaaa 134  Q
    || ||||||||||    
T  4905751 tgagcctaacaaa 4905763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 132
Target Start/End: Complemental strand, 22445635 - 22445511
Alignment:
Q  8 actattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatc 107  Q
    ||||||| ||||||||||||||||||||  |||||| | ||||||| | || ||  || | ||||||| ||| |||| ||||||||||||||||| ||||    
T  22445635 actattgagtttggttcgtggacataaacggtgggtagtccgatagtgtaatcctaatagtaggtggctcaatggatcttgaagaggctctgataccatc 22445536  T
Q  108 ttagaaatggtgattgggcctaaca 132  Q
    |||||| | ||| ||||| ||||||    
T  22445535 ttagaatttgtggttgggtctaaca 22445511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 6666531 - 6666658
Alignment:
Q  3 ctagcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgata 102  Q
    |||||||||||||| ||||| | |||| |||||| |||||||  |||||||| ||| ||  || | |||||||||||| ||| ||| ||||| ||| |||    
T  6666531 ctagcactattgggcttggtgcatggatataaatggtgggtgacccgatagaagaatccttatagcaggtggcccaacagatcttgtagaggttctaata 6666630  T
Q  103 tcatcttagaaatggtgattgggcctaa 130  Q
     |||||||||||| ||| ||||||||||    
T  6666631 ccatcttagaaatcgtggttgggcctaa 6666658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 5398608 - 5398682
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaa 79  Q
    ||||||||| || ||||||||||||||||||| |||||||| ||||||| ||||||| ||| | |||||||||||    
T  5398608 agcactatttggcttggttcgtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaa 5398682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 13555382 - 13555504
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    |||||||||| ||||||||||| |||||||||||||||| |    || ||||||| ||| | |||||| |||| |||| ||| ||||||||||||| |||    
T  13555382 cactattgggcttggttcgtgg-cataaatcgtgggtggcc----agcggaaacctgatagcaggtggtccaatggatcttggagaggctctgataccat 13555476  T
Q  107 cttagaaatggtgattgggcctaacaaa 134  Q
     | |||||| ||| ||||||||||||||    
T  13555477 atcagaaattgtggttgggcctaacaaa 13555504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 27634214 - 27634311
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgata 102  Q
    |||||||||||| ||||||||||||||||||  |||||||| |||||||  |||||| ||| | | |||| |||| |||| ||| |||||||||||||    
T  27634214 agcactattgggcttggttcgtggacataaacagtgggtggtccgatagcagaaacctgatagcaagtggtccaatggatcttggagaggctctgata 27634311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 52559755 - 52559626
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggccc-aacggat-gttgaagaggctctgata 102  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||||||    ||||  ||| | ||||||||| |||||||  |||| ||||||||||||    
T  52559755 agcactattgggcttggttcgtggacataaatggtgggtggcccgataacataaacttgatagcaggtggcccaaacggatctttgaggaggctctgata 52559656  T
Q  103 tcatcttagaaatggtgattgggcctaaca 132  Q
      |||||||||||  || ||||||||||||    
T  52559655 ctatcttagaaatcatggttgggcctaaca 52559626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 6218390 - 6218263
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||| || ||||||||  ||||||  | ||||| ||||||| ||| | |||||  |||| |||| ||| ||||||||||||| |    
T  6218390 agcactattgggcttggttcttgtacataaatgatgggtgacctgatagcggaaacctgatagtaggtgatccaatggatcttggagaggctctgatacc 6218291  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||| ||| | ||||||    
T  6218290 atcttagaaatcgtggttgtgtctaaca 6218263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 7926480 - 7926387
Alignment:
Q  39 tgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||| || |||| ||||||| ||| | ||||||||||| |||| ||| ||||||||||||| |||||| |||||  || ||||||||||||    
T  7926480 tgggtggccctatagtggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatcttcgaaatcttggttgggcctaaca 7926387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 4645826 - 4645718
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    |||| ||||| ||| ||||||||||||| | |||||||| ||||||| ||||||| ||| | ||||| ||||| |||| ||  |||||||||||||  ||    
T  4645826 cacttttgggcttgattcgtggacataattggtgggtggcccgatagcggaaacctgatagcaggtgacccaatggatctttgagaggctctgatactat 4645727  T
Q  107 cttagaaat 115  Q
    |||| ||||    
T  4645726 cttataaat 4645718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 5398348 - 5398399
Alignment:
Q  10 tattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacc 61  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||| |||||||    
T  5398348 tattgggcttggttcgtggacataaatggtgggtggtccgataggggaaacc 5398399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 35645298 - 35645353
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaac 60  Q
    ||||| |||||||||||||||||||||||||| | |||||| ||||||| ||||||    
T  35645298 agcacaattgggtttggttcgtggacataaatggcgggtggcccgatagcggaaac 35645353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 35645587 - 35645642
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaac 60  Q
    ||||| |||||||||||||||||||||||||| | |||||| ||||||| ||||||    
T  35645587 agcacaattgggtttggttcgtggacataaatggcgggtggcccgatagcggaaac 35645642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 11036657 - 11036771
Alignment:
Q  18 ttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatgg 117  Q
    ||||||| ||||||| ||| |||||||| | ||||| |||||||  || | ||||||||||| |||| ||  || |||||||||| ||||||| |||| |    
T  11036657 ttggttcatggacattaatggtgggtggcctgatagcggaaacctaatagtaggtggcccaatggatcttagagtggctctgataccatcttaaaaattg 11036756  T
Q  118 tgattgggcctaaca 132  Q
    || || |||||||||    
T  11036757 tggttaggcctaaca 11036771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 132
Target Start/End: Original strand, 24513344 - 24513385
Alignment:
Q  91 gaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    |||||||||||||||| |||||||| ||||||||||||||||    
T  24513344 gaggctctgatatcatgttagaaatcgtgattgggcctaaca 24513385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 132
Target Start/End: Original strand, 34357994 - 34358055
Alignment:
Q  71 gtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    |||||||||  ||| ||| |||||||||||||||||||||||||| ||| ||| ||||||||    
T  34357994 gtggcccaatagatcttgtagaggctctgatatcatcttagaaatcgtgtttgagcctaaca 34358055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 132
Target Start/End: Original strand, 40716553 - 40716646
Alignment:
Q  40 gggtgggccgatagaggaaacccgatggaaggtggcccaacggat-gttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    |||||| ||||||  ||||||| ||| | |||||||||||||||| || || |||||||||||| |||||||||||   || ||||||||||||    
T  40716553 gggtggcccgataacggaaacctgatagcaggtggcccaacggatcgtggatgaggctctgataccatcttagaaaccatggttgggcctaaca 40716646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 6778576 - 6778632
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacc 61  Q
    ||||||||| |||||||||||| ||||||||| | |||||| ||||||| |||||||    
T  6778576 agcactattaggtttggttcgtagacataaatggggggtggcccgatagcggaaacc 6778632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 9685549 - 9685457
Alignment:
Q  40 gggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    |||||| ||||||  ||||||| |||   ||||||||||| | ||  |||||||||||||||| ||| |||||||| ||| ||||||||||||    
T  9685549 gggtggcccgataacggaaacctgataacaggtggcccaaagaattgtgaagaggctctgataccatattagaaatcgtggttgggcctaaca 9685457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 132
Target Start/End: Original strand, 30530103 - 30530187
Alignment:
Q  48 cgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    |||||| ||||| | ||| | |||||||| || |||| ||| ||||||||||||| |||||||||||| ||| ||| ||||||||    
T  30530103 cgatagcggaaatctgatagcaggtggcctaatggatcttggagaggctctgataccatcttagaaattgtggttgagcctaaca 30530187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 14783149 - 14783212
Alignment:
Q  69 aggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| | ||  |||||||||||||||| ||| |||||||| ||| ||||||||||||    
T  14783149 aggtggcccaaagaattgtgaagaggctctgataccatattagaaatcgtggttgggcctaaca 14783212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 36686064 - 36686166
Alignment:
Q  30 cataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggccta 129  Q
    ||||||| |||||||| ||||||| ||||||| ||| | ||||||||||  | || ||||||||||||| |||  |||||| ||||  || |||||| ||    
T  36686064 cataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccattgaatcttgaagaggctcttatactatcttaaaaatcatggttgggcata 36686163  T
Q  130 aca 132  Q
    |||    
T  36686164 aca 36686166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 12869243 - 12869288
Alignment:
Q  87 tgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||| |||||||| |||||||||||| ||| ||||||||||||    
T  12869243 tgaagagactctgataccatcttagaaatcgtggttgggcctaaca 12869288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 131
Target Start/End: Complemental strand, 23209934 - 23209901
Alignment:
Q  98 tgatatcatcttagaaatggtgattgggcctaac 131  Q
    |||||||||||||||||| |||||||||||||||    
T  23209934 tgatatcatcttagaaatcgtgattgggcctaac 23209901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 25324170 - 25324263
Alignment:
Q  8 actattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgtt-gaagaggctctga 100  Q
    ||||||||| ||||| ||| || |||||| |||||||| ||||||| ||||||  ||| | ||||||||||| |||| || || ||||||||||    
T  25324170 actattgggcttggtgcgtagatataaatggtgggtggcccgatagcggaaacttgatagcaggtggcccaatggatcttggaggaggctctga 25324263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 25323937 - 25324041
Alignment:
Q  11 attgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatctta 110  Q
    |||||| ||||| |||||| |||||| |||||||  ||||| | |||||||  |  | |||||||||||| ||| ||| |||||||||| || ||| |||    
T  25323937 attgggcttggtgcgtggatataaatggtgggtgatccgatggtggaaacctaagagtaggtggcccaacagatcttggagaggctctgctaccatatta 25324036  T
Q  111 gaaat 115  Q
    |||||    
T  25324037 gaaat 25324041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31945112 - 31945060
Alignment:
Q  1 gactagcactattgggtttggttcgtggacataaatcgtgggtgggccgatag 53  Q
    ||||||| ||||||||||||||| || ||||||||| || ||||| |||||||    
T  31945112 gactagccctattgggtttggtttgtagacataaatggtaggtggtccgatag 31945060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 53828508 - 53828548
Alignment:
Q  92 aggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| |||||||||||| ||| ||||||||||||    
T  53828508 aggctctgataccatcttagaaattgtggttgggcctaaca 53828548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 7e-33; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 14466308 - 14466435
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||||||| ||||||| |||   | ||||||||| |||| ||| ||||||||||||| |    
T  14466308 agcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgataacaagtggcccaatggatcttggagaggctctgatacc 14466407  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||||||| ||||||||||||    
T  14466408 atcttagaaatggtggttgggcctaaca 14466435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 2029955 - 2029830
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||||||| |||||||  || | ||||||||||| |||| ||| ||||||||||||| |    
T  2029955 agcactattgggcttggttcgtggacataaatggtgggtggtccgatagcggaaacctaatagcaggtggcccaatggatcttggagaggctctgatacc 2029856  T
Q  105 atcttagaaatggtgattgggcctaa 130  Q
    ||||||||||| ||| ||||||||||    
T  2029855 atcttagaaatcgtggttgggcctaa 2029830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 40149134 - 40149261
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||||||||||||| |||||||| |||||||  |||| | ||| | ||||| ||||| |||| ||||||||||||||||| |    
T  40149134 agcactattgggcttggttcgtggacataaatagtgggtggtccgatagctgaaatctgatagcaggtgacccaatggatcttgaagaggctctgatacc 40149233  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||| ||||||||||||    
T  40149234 atcttagaaattgtggttgggcctaaca 40149261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 16419453 - 16419328
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||| | ||||||||||||||||||| ||||||||  |||||| ||||||| ||| | ||||||||||| |||| ||| ||||||||||||| |    
T  16419453 agcactattgagcttggttcgtggacataaatggtgggtggctcgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctgatacc 16419354  T
Q  105 atcttagaaatggtgattgggcctaa 130  Q
    ||||||||||| ||| ||||||||||    
T  16419353 atcttagaaatcgtggttgggcctaa 16419328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 5711572 - 5711700
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgtt-gaagaggctctgatat 103  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||||||  ||||||| ||| | |||||| ||||||||| || || ||||||||||||     
T  5711572 agcactattgggcttggttcgtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggtccaacggatcttggaggaggctctgatac 5711671  T
Q  104 catcttagaaatggtgattgggcctaaca 132  Q
     ||||||||||||||| ||||||||||||    
T  5711672 tatcttagaaatggtggttgggcctaaca 5711700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 40379342 - 40379469
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||| ||||| |||||||||||| |||||| |||||||| ||||||||||||||| ||| | |||||||| || |||| ||| | ||||||||||| |    
T  40379342 agcacttttgggcttggttcgtggatataaatggtgggtggcccgatagaggaaacctgatagcaggtggcctaatggatcttggaaaggctctgatacc 40379441  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||| ||||||||||||    
T  40379442 atcttagaaatcgtggttgggcctaaca 40379469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 17525234 - 17525339
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    |||||||||| ||||||||||||||||||| |||||||| ||||||| ||| ||| ||| | ||||||||||| |||| ||||||||||||| |||||||    
T  17525234 cactattgggcttggttcgtggacataaatggtgggtggcccgatagcggatacctgatagcaggtggcccaatggat-ttgaagaggctcttatatcat 17525332  T
Q  107 cttagaa 113  Q
    |||||||    
T  17525333 cttagaa 17525339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 93252 - 93379
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||| ||||||||||||| | |||||||| ||||||  ||||| | ||| | ||||||||||| |||| ||| ||||||||||||| |    
T  93252 agcactattgggcttgattcgtggacataattggtgggtggcccgataacggaaagctgatagcaggtggcccaatggatcttggagaggctctgatacc 93351  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    |||||| |||| ||| ||||||||||||    
T  93352 atcttaaaaatcgtggttgggcctaaca 93379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 16533498 - 16533390
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||  ||||||||||||||||||| |||||||| ||||||| | ||||| ||| | |||| |||||| |||| ||||||||||||||||| |    
T  16533498 agcactattggccttggttcgtggacataaatggtgggtggcccgatagcgaaaacctgatagcaggtagcccaatggatcttgaagaggctctgatacc 16533399  T
Q  105 atcttagaa 113  Q
    || ||||||    
T  16533398 attttagaa 16533390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 33606189 - 33606314
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    ||||||| || ||||||||||||||||||| |||||||| | ||||| ||||||| ||| | | ||| |||||  ||| |||||||| || |||||||||    
T  33606189 cactattaggcttggttcgtggacataaatggtgggtggcctgatagcggaaacctgatagcaagtgacccaatagatcttgaagagactttgatatcat 33606288  T
Q  107 cttagaaatggtgattgggcctaaca 132  Q
    ||||||||| ||| ||| ||||||||    
T  33606289 cttagaaatcgtggttgtgcctaaca 33606314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 34893598 - 34893506
Alignment:
Q  18 ttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatctta 110  Q
    ||||||||||||||||||| |||||||| ||||||| | ||||| ||| | ||||||||||| |||| ||| ||||||||||||| |||||||    
T  34893598 ttggttcgtggacataaatggtgggtggtccgatagcgaaaacctgatagtaggtggcccaatggatcttggagaggctctgataccatctta 34893506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 18607138 - 18607239
Alignment:
Q  1 gactagcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctga 100  Q
    |||||||||||||||| ||||||||| ||||||||| |||||| | ||||||  ||||||| ||| | | ||||||||| |||| ||| |||||||||||    
T  18607138 gactagcactattgggcttggttcgtagacataaatggtgggttgcccgataacggaaacctgatagcatgtggcccaatggatcttggagaggctctga 18607237  T
Q  101 ta 102  Q
    ||    
T  18607238 ta 18607239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 15124681 - 15124808
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||  ||||||||||||||||||| |||| ||  ||||||  | ||||| ||| | |||||| |||| |||| ||| |||| |||||||| |    
T  15124681 agcactattggacttggttcgtggacataaatggtggatgacccgataacgaaaacctgatagcaggtggtccaatggatcttggagagactctgatacc 15124780  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||| ||||| ||||||    
T  15124781 atcttagaaatcgtggttgggtctaaca 15124808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 17719573 - 17719459
Alignment:
Q  18 ttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatgg 117  Q
    ||||||||||||||||||| |||| ||| | ||||| ||||||| ||| | |||||||| || |||| ||| |||| || ||||| |||||||||||| |    
T  17719573 ttggttcgtggacataaatggtggatggccggataggggaaacctgatagcaggtggccaaatggatcttggagagactttgataccatcttagaaattg 17719474  T
Q  118 tgattgggcctaaca 132  Q
    || ||||||| ||||    
T  17719473 tggttgggccgaaca 17719459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 24396036 - 24395922
Alignment:
Q  18 ttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatgg 117  Q
    ||||||| ||||||||||| |||||||| ||||||| | ||||  ||  | |||||| |||| |||| ||||||||||||||||| | |||||||||| |    
T  24396036 ttggttcatggacataaatggtgggtggtccgatagtgaaaacatgagagcaggtggtccaatggatcttgaagaggctctgataccctcttagaaatcg 24395937  T
Q  118 tgattgggcctaaca 132  Q
    || || |||||||||    
T  24395936 tggtttggcctaaca 24395922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 32356567 - 32356444
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    |||||||  ||||||||||||||||||||| || ||| | ||||||| ||||||| ||  | ||||||||||| | || ||||||||||||||||| ||     
T  32356567 cactattcagtttggttcgtggacataaatggtaggtagcccgatagcggaaacctga--gcaggtggcccaatgaatattgaagaggctctgataccaa 32356470  T
Q  107 cttagaaatggtgattgggcctaaca 132  Q
    ||||||| | ||  ||||||||||||    
T  32356469 cttagaattcgtagttgggcctaaca 32356444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 102
Target Start/End: Original strand, 37812401 - 37812498
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgata 102  Q
    |||| ||||||| ||||||||||||||||||  |||||||| |||||||  |||||| ||| | ||||||||||| |||| ||| |||||||| ||||    
T  37812401 agcattattgggcttggttcgtggacataaacagtgggtggcccgatagcagaaacctgatagcaggtggcccaatggatcttggagaggctccgata 37812498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 93556 - 93652
Alignment:
Q  36 tcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    |||||||||| ||||||  ||||||| ||| | ||||| ||||| |||| ||| | ||| ||||||| |||||||||||| ||| ||||||||||||    
T  93556 tcgtgggtggcccgataacggaaacctgatagtaggtgacccaatggatcttggaaaggttctgataccatcttagaaatcgtggttgggcctaaca 93652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 30701169 - 30701249
Alignment:
Q  18 ttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctct 98  Q
    |||||| |||||||||||| |||| ||| ||||||||  ||||| ||| | ||||||||||| |||| |||||||| ||||    
T  30701169 ttggtttgtggacataaatggtggatggcccgatagaaaaaacctgatagtaggtggcccaatggatcttgaagagactct 30701249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 21383631 - 21383694
Alignment:
Q  69 aggtggcccaacggatgttgaag-aggctctgatatcatcttagaaatggtgattgggcctaac 131  Q
    |||||||||||| ||| ||| || ||||||||||| |||||||||||| ||| |||||||||||    
T  21383631 aggtggcccaacagatcttggaggaggctctgataccatcttagaaatcgtggttgggcctaac 21383694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 130
Target Start/End: Original strand, 31700936 - 31700995
Alignment:
Q  71 gtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaa 130  Q
    ||||||||| |||| ||| ||||||||| ||| |||||||||||| ||| ||||||||||    
T  31700936 gtggcccaatggatcttggagaggctctaataccatcttagaaatcgtggttgggcctaa 31700995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 132
Target Start/End: Complemental strand, 13210686 - 13210585
Alignment:
Q  32 taaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaag-aggctctgatatcatcttagaaatggtgattgggcctaa 130  Q
    ||||| |||||| | ||||||||||||| | ||| | | ||||||||| |||| ||| || || |||||||| |||||||||| | ||| ||||||||||    
T  13210686 taaatggtgggttgcccgatagaggaaatctgatagcatgtggcccaatggatcttggaggagtctctgataccatcttagaatttgtggttgggcctaa 13210587  T
Q  131 ca 132  Q
    ||    
T  13210586 ca 13210585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 13250157 - 13250282
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    ||||||||||  || ||||||||||||||| |||||||  || ||||  ||||||  ||  |||||| ||||| |||| ||| | | ||||| |||||||    
T  13250157 cactattgggcatgcttcgtggacataaatggtgggtgccccaatagcagaaaccttataaaaggtgacccaatggatcttggaaaagctctaatatcat 13250256  T
Q  107 cttagaaatggtgattgggcctaaca 132  Q
    ||||||||| ||  |||| |||||||    
T  13250257 cttagaaatcgtatttggacctaaca 13250282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 19981957 - 19981908
Alignment:
Q  4 tagcactattgggtttggttcgtggacataaatcgtgggtgggccgatag 53  Q
    ||||||||||| ||||||||||| |||| |||| |||||||| |||||||    
T  19981957 tagcactattgagtttggttcgtagacacaaatggtgggtggtccgatag 19981908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 27897586 - 27897631
Alignment:
Q  87 tgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||| || ||||| |||||||||||||||| ||||||||||||    
T  27897586 tgaagagactttgataccatcttagaaatggtggttgggcctaaca 27897631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 115
Target Start/End: Complemental strand, 42895432 - 42895323
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggccc-aacggatgttgaagaggctctgatatca 105  Q
    ||||||| ||||||||||  |||||||||| |||||| | ||||||| ||||||  |||   ||||||||| || |||| ||  ||||||||||||| ||    
T  42895432 cactattaggtttggttcagggacataaatggtgggtcgcccgatagcggaaacttgatatcaggtggccctaatggatcttagagaggctctgatacca 42895333  T
Q  106 tcttagaaat 115  Q
    || |||||||    
T  42895332 tcatagaaat 42895323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 5509230 - 5509138
Alignment:
Q  40 gggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    |||||| ||||||  ||||||| |||   ||||||||||| | ||  |||||||||||||||| ||| ||||||||  || ||||||||||||    
T  5509230 gggtggcccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcatggttgggcctaaca 5509138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 132
Target Start/End: Original strand, 28407778 - 28407818
Alignment:
Q  92 aggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| |||||||||||| ||| ||||||||||||    
T  28407778 aggctctgataccatcttagaaatcgtggttgggcctaaca 28407818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 98
Target Start/End: Original strand, 44404061 - 44404153
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgata-gaggaaacccgatggaaggtggcccaacggatgttgaagaggctct 98  Q
    |||||||||| ||||||| ||||||||||| |||||||  |||||| | ||||||| ||| | |||||| |||| |||| ||| |||| ||||    
T  44404061 cactattgggcttggttcatggacataaatagtgggtgacccgataggcggaaacctgatagcaggtggtccaatggatcttggagagactct 44404153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 2102 - 1975
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||||||||||||| |||||||   |||||| ||||||| |||   ||||||||||| |||| ||| ||||||||||||| |    
T  2102 agcactattgggcttggttcgtggacataaatggtgggtgactcgatagcggaaacctgataacaggtggcccaatggatcttggagaggctctgatacc 2003  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||||||| ||||||||||||    
T  2002 atcttagaaatggtggttgggcctaaca 1975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 2859525 - 2859652
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||||||||||||| |||||||| |||||||  ||||||  || ||||||||||||| |||| ||||||||||||| ||| |    
T  2859525 agcactattgggcttggttcgtggacataaatggtgggtggcccgatagcagaaacctaatagaaggtggcccaatggatcttgaagaggctctaatacc 2859624  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    |||||||||||| || ||||| ||||||    
T  2859625 atcttagaaatgatggttggggctaaca 2859652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 132
Target Start/End: Complemental strand, 35772214 - 35772088
Alignment:
Q  6 gcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatca 105  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||| ||||||| ||| | || |||||||| |||| ||||  ||||||||||| ||    
T  35772214 gcactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacctgatagcagatggcccaatggatcttgagaaggctctgatacca 35772115  T
Q  106 tcttagaaatggtgattgggcctaaca 132  Q
    |||||||||| ||| ||||||||||||    
T  35772114 tcttagaaatcgtggttgggcctaaca 35772088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 26177094 - 26176967
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||  |||||||||||| |||||| |||||||| ||||||| ||||| | ||| | ||||||||||| |||| ||| |||||||||||||||    
T  26177094 agcactattggacttggttcgtggatataaatggtgggtggtccgatagcggaaatctgatagcaggtggcccaatggatcttggagaggctctgatatc 26176995  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| | | ||||||||||||    
T  26176994 atcttagaaatcgcggttgggcctaaca 26176967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 51460336 - 51460467
Alignment:
Q  1 gactagcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctga 100  Q
    ||||||||| |||| |||||||||||||||| |||| |||||| | ||||||| ||||||| ||| | ||||||||||| |||| ||| |||||||||||    
T  51460336 gactagcacaattgagtttggttcgtggacacaaatggtgggtcgcccgatagcggaaacctgatagcaggtggcccaatggatcttggagaggctctga 51460435  T
Q  101 tatcatcttagaaatggtgattgggcctaaca 132  Q
    |||||| ||||||||  || ||||||||||||    
T  51460436 tatcattttagaaattatggttgggcctaaca 51460467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 39348250 - 39348377
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgtt-gaagaggctctgatat 103  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||||||| ||||||| ||| | ||||||||||| |||  || || ||||||||||||     
T  39348250 agcactattgggcttggttcgtggacataaatggtgggtggtccgatagtggaaacctgatagcaggtggcccaatggaccttggaggaggctctgatac 39348349  T
Q  104 catcttagaaatggtgattgggcctaaca 132  Q
    |||||||||||| ||| ||||||||||||    
T  39348350 catcttagaaatcgtg-ttgggcctaaca 39348377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 4112904 - 4113031
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||| | ||||||||||||||||||| |||||||| || |||| ||||||| ||| || |||||| ||| |||| ||| |||||||| |||| |    
T  4112904 agcactattgagcttggttcgtggacataaatggtgggtggtccaatagcggaaacctgatagatggtggctcaatggatcttggagaggctccgatacc 4113003  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||| ||||||||||||    
T  4113004 atcttagaaatcgtggttgggcctaaca 4113031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 132
Target Start/End: Original strand, 4098306 - 4098428
Alignment:
Q  10 tattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatctt 109  Q
    ||||||| ||||||||||||||||||  |||||||| |||||||  |||||| ||| | ||||||||||| |||| |||||||| |||||||| || |||    
T  4098306 tattgggcttggttcgtggacataaagggtgggtggcccgatagcagaaacctgattgcaggtggcccaatggatcttgaagagtctctgataccaactt 4098405  T
Q  110 agaaatggtgattgggcctaaca 132  Q
    |||||| ||| ||||||||||||    
T  4098406 agaaatcgtggttgggcctaaca 4098428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 30370007 - 30369894
Alignment:
Q  19 tggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggt 118  Q
    |||||||||||||||||| |||||||| ||||||| ||||||| ||| | ||||| ||||| |||| ||| |||||||||||||  ||||||||||| ||    
T  30370007 tggttcgtggacataaatggtgggtggcccgatagtggaaacctgatagcaggtgacccaatggatcttggagaggctctgatacaatcttagaaatcgt 30369908  T
Q  119 gattgggcctaaca 132  Q
    | ||||||||||||    
T  30369907 ggttgggcctaaca 30369894  T

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Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 115
Target Start/End: Original strand, 4112675 - 4112783
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    |||||||||| ||||||||| ||||||||| ||||||||  |||||| ||||||| ||| | |||||| |||| |||| ||| ||||||||||||| |||    
T  4112675 cactattgggcttggttcgttgacataaatggtgggtggttcgatagcggaaacctgatagcaggtggtccaatggatcttggagaggctctgataccat 4112774  T
Q  107 cttagaaat 115  Q
    |||||||||    
T  4112775 cttagaaat 4112783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 101
Target Start/End: Complemental strand, 25713342 - 25713248
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgat 101  Q
    |||||||||| ||||||||||||||||||| |||||||| ||||||| ||||||  ||| | ||||||||||| |||| ||| ||||||||||||    
T  25713342 cactattgggcttggttcgtggacataaatggtgggtggcccgatagcggaaacttgatagcaggtggcccaatggatcttggagaggctctgat 25713248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 33156918 - 33156792
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaag-aggctctgatatca 105  Q
    |||||||||| ||| ||||||||||||||| |||| ||| ||||||| ||||||| ||| | |||||  ||||||||| ||| || ||||||| ||| ||    
T  33156918 cactattgggcttgattcgtggacataaatggtggatggcccgatagcggaaacctgatagcaggtgaaccaacggatcttggagtaggctctaatacca 33156819  T
Q  106 tcttagaaatggtgattgggcctaaca 132  Q
    |||||||||| ||| ||||||||||||    
T  33156818 tcttagaaatcgtggttgggcctaaca 33156792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 27413531 - 27413406
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    |||||||||| ||| ||||||||||||||| |||||||| ||||||| ||||| | |||   |||||| | ||  ||| ||| |||||||||||||||||    
T  27413531 cactattgggcttgattcgtggacataaatggtgggtggcccgatagcggaaatctgataacaggtggtctaatagatcttggagaggctctgatatcat 27413432  T
Q  107 cttagaaatggtgattgggcctaaca 132  Q
    ||||||||| ||| |||| |||||||    
T  27413431 cttagaaatcgtggttggacctaaca 27413406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 52961537 - 52961436
Alignment:
Q  1 gactagcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctga 100  Q
    |||||||||||||| | ||| |||||| |||||| | |||||||| ||||||| ||||||| ||| | ||||||||||| |||| |||||||||||||||    
T  52961537 gactagcactattgagcttgtttcgtgtacataactggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatcttgaagaggctctga 52961438  T
Q  101 ta 102  Q
    ||    
T  52961437 ta 52961436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 25145618 - 25145745
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||| | ||| ||||||||||| ||| |||||||| ||||||  ||||||| ||| | ||||||  |||  ||| ||| |||||||||||||||    
T  25145618 agcactattgagcttgattcgtggacattaatggtgggtggtccgataacggaaacctgatagcaggtgggtcaatagatcttggagaggctctgatatc 25145717  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    |||||||||||  || ||||||||||||    
T  25145718 atcttagaaatcatggttgggcctaaca 25145745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 132
Target Start/End: Original strand, 26173370 - 26173481
Alignment:
Q  21 gttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtga 120  Q
    |||||||||||||||| ||||| || ||||||| ||||||| ||| | |||||| || | |||| | ||||||||||||||||||| ||||||| ||||     
T  26173370 gttcgtggacataaatggtggggggtccgatagcggaaacctgatagcaggtggtccgatggatatcgaagaggctctgatatcattttagaaagggtgg 26173469  T
Q  121 ttgggcctaaca 132  Q
    |||| |||||||    
T  26173470 ttggacctaaca 26173481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 7307905 - 7307780
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    ||||||||| |||||||||||||||||||| |||||||| || |||| ||||||| ||| | ||  | ||||| |||| |||||| | || |||||||||    
T  7307905 cactattggatttggttcgtggacataaatggtgggtggtccaatagcggaaacctgatagcagacgacccaatggatcttgaagtgactatgatatcat 7307806  T
Q  107 cttagaaatggtgattgggcctaaca 132  Q
    |||||||||  || || |||||||||    
T  7307805 cttagaaattatggttaggcctaaca 7307780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 132
Target Start/End: Complemental strand, 16163111 - 16162992
Alignment:
Q  13 tgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttaga 112  Q
    |||| |||| |||||||||||||| || ||||| ||||||| ||||||| ||| | ||||||||||  |||| ||| ||||||| ||||||||||||| |    
T  16163111 tgggcttggctcgtggacataaatggtaggtggcccgatagcggaaacctgatagcaggtggcccattggatcttggagaggctttgatatcatcttaaa 16163012  T
Q  113 aatggtgattgggcctaaca 132  Q
    ||| ||| ||| | ||||||    
T  16163011 aattgtggttgagtctaaca 16162992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 38668311 - 38668184
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||| ||||||| ||||||| |||||||||||  | ||||  |||||||  |||||| |||   ||||| ||||| ||||  || ||||||||||||| |    
T  38668311 agcaatattgggcttggttcatggacataaatgataggtgacccgatagcagaaacctgataacaggtgacccaatggatcatggagaggctctgatacc 38668212  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||||||||||||||||    
T  38668211 atcttagaaattgtgattgggcctaaca 38668184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 7653425 - 7653300
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    |||||||| |||||||||||| |||||||| |||| ||  ||||||| ||||||  ||| | | |||||| |  |||| ||||||| || ||||||||||    
T  7653425 cactattgcgtttggttcgtgtacataaatggtggatgccccgatagtggaaactggatagtaagtggcctattggatcttgaagaagcactgatatcat 7653326  T
Q  107 cttagaaatggtgattgggcctaaca 132  Q
    |||| |||| ||||||| ||||||||    
T  7653325 cttaaaaattgtgattgagcctaaca 7653300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 8870872 - 8870935
Alignment:
Q  69 aggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| |||| ||| |||| |||||||| |||||||||||||||| |||| |||||||    
T  8870872 aggtggcccaatggatattggagagactctgataccatcttagaaatggtggttggacctaaca 8870935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 115
Target Start/End: Original strand, 26346931 - 26346977
Alignment:
Q  69 aggtggcccaacggatgttgaagaggctctgatatcatcttagaaat 115  Q
    |||||| ||||||||| |||| |||||||||||||||||||||||||    
T  26346931 aggtggtccaacggattttgaggaggctctgatatcatcttagaaat 26346977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 38733333 - 38733210
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| || |||||| || |||||| ||||||||    |||| ||||||| ||| | |||||| |||| |||| ||| |||| |||||||| |    
T  38733333 agcactattgggcttagttcgtagatataaatggtgggtgg----atagcggaaacctgatagcaggtggtccaatggatcttggagagactctgatacc 38733238  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||| |||  |||||||    
T  38733237 atcttagaaatcgtggttgaacctaaca 38733210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 8870822 - 8870862
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgg 45  Q
    ||||| |||||||||||||||||||||||||| ||||||||    
T  8870822 agcacaattgggtttggttcgtggacataaatggtgggtgg 8870862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 51589143 - 51589051
Alignment:
Q  40 gggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    |||||| ||||||  ||||||| |||   ||||||||||| | ||  |||||||||| ||||| ||| |||||||||||| ||||||||||||    
T  51589143 gggtggcccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctttgataccatattagaaatggtggttgggcctaaca 51589051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 369818 - 369779
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtg 44  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  369818 agcactattgggcttggttcgtggacataaatggtgggtg 369779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 769014 - 768971
Alignment:
Q  1 gactagcactattgggtttggttcgtggacataaatcgtgggtg 44  Q
    ||||||||||||||| |||| ||||||||||||||| |||||||    
T  769014 gactagcactattggatttgattcgtggacataaatggtgggtg 768971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 132
Target Start/End: Original strand, 31496293 - 31496396
Alignment:
Q  29 acataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcct 128  Q
    |||||||| |||||||| ||||||| || |||| ||| | |||||| |||| |||| || ||||| |||| |||  ||||||||||| ||||||| | ||    
T  31496293 acataaatggtgggtggtccgatagcgggaacctgatagcaggtggtccaatggatcttaaagagactctaatactatcttagaaatcgtgattgagtct 31496392  T
Q  129 aaca 132  Q
    ||||    
T  31496393 aaca 31496396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 51460012 - 51460075
Alignment:
Q  69 aggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| |||| ||| |||||| || ||| |||||||||||| ||| ||||||||||||    
T  51460012 aggtggcccaatggatcttggagaggcgctaataccatcttagaaattgtggttgggcctaaca 51460075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 51589928 - 51589865
Alignment:
Q  69 aggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| | ||  |||||||||||||||| ||| |||||||| ||| ||||||||||||    
T  51589928 aggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgggcctaaca 51589865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 9146774 - 9146872
Alignment:
Q  18 ttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaag-aggctctgatatcatcttagaaat 115  Q
    ||||||||||||||||||| |||||||  ||||||| || ||||  || | || ||| |||| |||| ||| || ||||||||||| ||||||||||||    
T  9146774 ttggttcgtggacataaatggtgggtgacccgatagcggtaaccttattgcagttggtccaatggatcttggagaaggctctgataccatcttagaaat 9146872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 12325432 - 12325477
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgata 52  Q
    |||||||||| ||||||||||||||||||| || ||||| ||||||    
T  12325432 cactattgggcttggttcgtggacataaatggtaggtggcccgata 12325477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 2120172 - 2120136
Alignment:
Q  96 tctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    |||||||||||||||||||| |||||||| |||||||    
T  2120172 tctgatatcatcttagaaatcgtgattggacctaaca 2120136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 132
Target Start/End: Original strand, 35038330 - 35038453
Alignment:
Q  8 actattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatc 107  Q
    ||||||||| ||||||||||||||||||| |||||||| ||||||| ||||||| ||| | ||||||||||| |||| ||| |||||| |||||| ||||    
T  35038330 actattgggcttggttcgtggacataaatggtgggtgg-ccgatagcggaaacctgattgcaggtggcccaatggatcttggagaggcactgataccatc 35038428  T
Q  108 ttagaaatggtgattgggcctaaca 132  Q
    |||||| | ||| ||||||||||||    
T  35038429 ttagaagtcgtggttgggcctaaca 35038453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 4155510 - 4155383
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||| ||||||||  |||||||| ||||||| ||||||| ||| | ||||||||||| | || ||| |||| |||||||| |    
T  4155510 agcactattgggcttggttcgtcgacataaacggtgggtggcccgatagcggaaacctgatagcaggtggcccaatgaatcttggagagactctgatacc 4155411  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||| ||||||||||||    
T  4155410 atcttagaaatcgtggttgggcctaaca 4155383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 20303285 - 20303410
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    |||||||||  ||||||||||||||||||| |||||||| ||||||| ||||||| ||| | ||||||||||| |||| ||  ||||||||||||| |||    
T  20303285 cactattggacttggttcgtggacataaatggtgggtggaccgatagtggaaacctgatagcaggtggcccaatggattttagagaggctctgataccat 20303384  T
Q  107 cttagaaatggtgattgggcctaaca 132  Q
     |||||||| ||| |||| |||||||    
T  20303385 attagaaattgtggttggacctaaca 20303410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 16239776 - 16239650
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgtt-gaagaggctctgatatca 105  Q
    |||||||| | ||||||||||||||||||| ||||||||  |||||  ||||||| ||| | |||||||| ||||||| || || |||||||||||| ||    
T  16239776 cactattgagcttggttcgtggacataaatggtgggtggctcgataacggaaacctgatagcaggtggccaaacggatcttggaggaggctctgatacca 16239677  T
Q  106 tcttagaaatggtgattgggcctaaca 132  Q
    |||||||||| ||| ||||||||||||    
T  16239676 tcttagaaatcgtggttgggcctaaca 16239650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 132
Target Start/End: Original strand, 20327749 - 20327874
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    |||||||||| ||||||| ||||||||||| |||||||| ||||||| ||||||| ||| | ||||||||||| |||| ||  |||||| |||||| |||    
T  20327749 cactattgggcttggttcctggacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggattttagagaggcactgataccat 20327848  T
Q  107 cttagaaatggtgattgggcctaaca 132  Q
     ||||||||  || ||||||||||||    
T  20327849 attagaaatcatggttgggcctaaca 20327874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 13574814 - 13574946
Alignment:
Q  1 gactagcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttga-agaggctctg 99  Q
    |||||||||||||||| ||||||||||||||||||| |||||||   |||||| ||||||| ||| | ||||||||||| |||| || |  |||||| ||    
T  13574814 gactagcactattgggcttggttcgtggacataaatggtgggtgacacgatagcggaaacctgatagcaggtggcccaatggatcttaactgaggctttg 13574913  T
Q  100 atatcatcttagaaatggtgattgggcctaaca 132  Q
    ||| ||| |||||||| ||| ||||||||||||    
T  13574914 ataccatattagaaattgtggttgggcctaaca 13574946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 102
Target Start/End: Original strand, 19954353 - 19954447
Alignment:
Q  8 actattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgata 102  Q
    ||||||||| ||||||||||||||||||| |||||||| | ||||| | ||||| ||| | || |||||||| |||| |||||||||||||||||    
T  19954353 actattgggcttggttcgtggacataaatggtgggtggtcagatagcgaaaacctgatagcagatggcccaatggatcttgaagaggctctgata 19954447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 34992792 - 34992687
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||||||||||||||| |||||||  |||| || ||||||| ||| | ||||||||||| |||  ||| |||| |||||||| |    
T  34992792 agcactattgggcttggttcgtggacataaatggtgggtgacccgacagcggaaacctgatagcaggtggcccaatggaccttggagagactctgatacc 34992693  T
Q  105 atctta 110  Q
    ||||||    
T  34992692 atctta 34992687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 45828185 - 45828078
Alignment:
Q  25 gtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgg 124  Q
    |||||||||||| ||||||||  |||||| ||||||| | | | ||||||| ||| |||| ||| ||||||||||||| |||||||||||| ||| | ||    
T  45828185 gtggacataaatggtgggtggctcgatagcggaaacctggtagcaggtggcgcaatggatcttggagaggctctgataccatcttagaaattgtggtagg 45828086  T
Q  125 gcctaaca 132  Q
    ||||||||    
T  45828085 gcctaaca 45828078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 31317417 - 31317287
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgtt-gaagaggctctgat-- 101  Q
    |||||||||| ||||||||||||||||||||| |||||||| |||||| |  ||||| ||| | |||||| ||||||||| || |||||| |||||||      
T  31317417 agcactattgagtttggttcgtggacataaatggtgggtggcccgata-acaaaacctgatagtaggtggtccaacggatcttggaagagactctgatac 31317319  T
Q  102 -atcatcttagaaatggtgattgggcctaaca 132  Q
     | |||||||||||| ||| ||| ||||||||    
T  31317318 caccatcttagaaatcgtggttgagcctaaca 31317287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 33640168 - 33640104
Alignment:
Q  69 aggtggcccaacggatgttgaag-aggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    |||||| ||||||||| ||| || |||||||||||||||||||||||| ||||||||||||||||    
T  33640168 aggtggtccaacggattttggaggaggctctgatatcatcttagaaattgtgattgggcctaaca 33640104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 103
Target Start/End: Original strand, 52724121 - 52724217
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatat 103  Q
    |||||| | ||||||||| ||||||||||| |||||||| ||||||| | ||||| ||| | | ||| ||||| | |||||||||||||||||||||    
T  52724121 cactatcgagtttggttcatggacataaatggtgggtggcccgatagcgaaaacctgatagcatgtgacccaatgaatgttgaagaggctctgatat 52724217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 8142558 - 8142672
Alignment:
Q  18 ttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatgg 117  Q
    ||||||||||||||||||| |||||||| | ||| ||||||| | ||| | || || || || |||| || |||||||||||||| |||||||||||| |    
T  8142558 ttggttcgtggacataaatggtgggtggtctgattgaggaaatctgatagcagatgacctaatggattttaaagaggctctgataccatcttagaaatcg 8142657  T
Q  118 tgattgggcctaaca 132  Q
    || || | |||||||    
T  8142658 tggttagacctaaca 8142672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 26272235 - 26272349
Alignment:
Q  18 ttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatgg 117  Q
    ||||||||||| ||||||| |||||| |  ||||||  |||||| ||  | || |||||||| |||| ||||||| ||| |||||||||||||||||| |    
T  26272235 ttggttcgtgggcataaatggtgggttgaacgatagcagaaacctgaaagcagatggcccaatggatattgaagatgctttgatatcatcttagaaattg 26272334  T
Q  118 tgattgggcctaaca 132  Q
    || ||||| ||||||    
T  26272335 tggttgggtctaaca 26272349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 49629790 - 49629664
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtggg-tgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatca 105  Q
    |||||||||| ||||||  ||||||||||| ||||| ||  |||||||  |||||| ||| | |||||| |||| |||| ||||||||||||| ||| ||    
T  49629790 cactattgggcttggtttatggacataaatggtgggatgctccgatagcagaaacctgatagcaggtggtccaatggatcttgaagaggctctaatacca 49629691  T
Q  106 tcttagaaatggtgattgggcctaaca 132  Q
    | ||| ||||||| |||||| ||||||    
T  49629690 ttttaaaaatggtaattgggtctaaca 49629664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 132
Target Start/End: Complemental strand, 54368637 - 54368575
Alignment:
Q  70 ggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    |||||||||| |||| ||||||||||||||||| |||||||||||| ||| ||||| ||||||    
T  54368637 ggtggcccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggtctaaca 54368575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 54568028 - 54567951
Alignment:
Q  55 ggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||| ||| | ||||||| ||| |||| ||| ||||||||||||| |||||||||||| ||| ||||||||||||    
T  54568028 ggaaacctgatagcaggtggctcaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaaca 54567951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22729683 - 22729623
Alignment:
Q  1 gactagcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacc 61  Q
    |||||||| ||||||| ||||||||||||||||||| |||||||  ||||||| |||||||    
T  22729683 gactagcattattgggcttggttcgtggacataaattgtgggtgatccgatagcggaaacc 22729623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 20303197 - 20303276
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggat 84  Q
    |||||| ||||  ||||||||||||||||||| |||||||| ||||||| ||||||| ||| | ||||| ||||| ||||    
T  20303197 agcactgttggacttggttcgtggacataaatggtgggtggaccgatagcggaaacctgatagcaggtgacccaatggat 20303276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 113
Target Start/End: Original strand, 22775534 - 22775641
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaa-gaggctctgatatca 105  Q
    |||||||||| ||||| | |||| |||||| |||||||| |||||||  ||||||  || | |||||||||||  ||| ||||| |||||||||||| ||    
T  22775534 cactattgggattggtgcatggatataaatggtgggtggcccgatagcagaaacctaatagcaggtggcccaatagatcttgaaggaggctctgatacca 22775633  T
Q  106 tcttagaa 113  Q
    ||||||||    
T  22775634 tcttagaa 22775641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 34659137 - 34659240
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    ||||||| |||||||| | |||| ||||||  ||||||| ||||||| ||||||   || | | |||| ||||||||| ||||||||||||||||| |||    
T  34659137 cactatttggtttggtgcatggatataaatgatgggtggtccgatagtggaaacttaatagcatgtggtccaacggatcttgaagaggctctgataccat 34659236  T
Q  107 ctta 110  Q
    ||||    
T  34659237 ctta 34659240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 106
Target Start/End: Complemental strand, 39269258 - 39269159
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    ||||||| || ||||||||||||||||||| |||||||| ||||||  ||  ||| ||| | ||||||||||| ||||  || |||||| ||||||||||    
T  39269258 cactattagggttggttcgtggacataaatggtgggtggtccgataacggccacctgatagcaggtggcccaatggatcatggagaggccctgatatcat 39269159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 1723056 - 1723101
Alignment:
Q  87 tgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    |||||||||||||||| |||||||||||| ||| ||||||||||||    
T  1723056 tgaagaggctctgataccatcttagaaatcgtggttgggcctaaca 1723101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 12930076 - 12930153
Alignment:
Q  56 gaaacccgatggaaggtggcccaacggatgttgaag-aggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    |||||| ||| | ||||||||||||||||  || || ||||| ||||| |||||||||||||||| ||||||||||||    
T  12930076 gaaacctgatagcaggtggcccaacggatcatggaggaggctttgataccatcttagaaatggtggttgggcctaaca 12930153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 39683401 - 39683462
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatg 66  Q
    |||| ||||||| ||||||||||||||||||| |||||||| |||||||  |||||| ||||    
T  39683401 agcattattgggcttggttcgtggacataaatggtgggtggcccgatagcagaaacctgatg 39683462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 35018591 - 35018535
Alignment:
Q  75 cccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaac 131  Q
    |||||||||| ||| | |||||||||||||||||||||| | ||| |||||||||||    
T  35018591 cccaacggatcttggataggctctgatatcatcttagaatttgtggttgggcctaac 35018535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 11589907 - 11589844
Alignment:
Q  69 aggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| | ||  |||||||||||||||| ||| |||||||| ||| ||||||||||||    
T  11589907 aggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgggcctaaca 11589844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 26753419 - 26753544
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    ||||| ||||||||||||||||| |||||||  | |||||  ||||||| | || || ||| | |||||  |||| | || ||||||| |||| |||||     
T  26753419 agcacaattgggtttggttcgtgaacataaacggcgggtgccccgatagtgaaatcctgatagcaggtgatccaatgaatcttgaagatgctcggatatt 26753518  T
Q  105 atcttagaaatggtgattgggcctaa 130  Q
    ||||||||||| ||| ||||| ||||    
T  26753519 atcttagaaatcgtggttgggtctaa 26753544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 29215723 - 29215752
Alignment:
Q  7 cactattgggtttggttcgtggacataaat 36  Q
    ||||||||||||||||||||||||||||||    
T  29215723 cactattgggtttggttcgtggacataaat 29215752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 24866215 - 24866132
Alignment:
Q  18 ttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgata 102  Q
    |||| |||||||||||||| || ||||| || |||  ||||||| ||| | ||||||||||| | || |||||||||||||||||    
T  24866215 ttggctcgtggacataaatggtaggtgg-ccaataacggaaacctgatagcaggtggcccaatgaatcttgaagaggctctgata 24866132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 28087177 - 28087233
Alignment:
Q  69 aggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattggg 125  Q
    ||||||||||| | ||  ||||||||||||| || |||||||||||| |||||||||    
T  28087177 aggtggcccaaagaatcgtgaagaggctctggtaccatcttagaaatcgtgattggg 28087233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 5834 - 5714
Alignment:
Q  12 ttgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatcttag 111  Q
    ||||| ||||||||||| ||||||  |||||||   |||||  ||||||| ||| | ||||||||||| |||| ||||||||||||||||| ||||||||    
T  5834 ttgggcttggttcgtgggcataaacggtgggtgattcgataacggaaacctgatagcaggtggcccaatggattttgaagaggctctgataccatcttag 5735  T
Q  112 aaatggtgattgggcctaaca 132  Q
    |||| ||| ||||| ||||||    
T  5734 aaatcgtggttgggtctaaca 5714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 132
Target Start/End: Complemental strand, 14484 - 14362
Alignment:
Q  10 tattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcatctt 109  Q
    ||||||| ||| ||||||||||||||| || ||||| ||||||| ||||||| |||   |  |||||||| |||| ||| ||||||||||||| ||||||    
T  14484 tattgggcttgattcgtggacataaatggtaggtggcccgatagcggaaacctgataacatatggcccaatggatcttggagaggctctgataccatctt 14385  T
Q  110 agaaatggtgattgggcctaaca 132  Q
    |||||  ||| ||||||||||||    
T  14384 agaaaacgtggttgggcctaaca 14362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 82027 - 81901
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||||| ||||||| ||||||||||| ||| ||||  |||| | ||||||| |||   |||| | |||| |||| ||| ||||||||||||| |    
T  82027 agcactattgggcttggttcatggacataaatggtgcgtggctcgat-gtggaaacctgataacaggtagtccaatggatcttggagaggctctgatacc 81929  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| ||| ||||||||||||    
T  81928 atcttagaaatcgtggttgggcctaaca 81901  T

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Target: scaffold0045 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 115
Target Start/End: Original strand, 41106 - 41214
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatcat 106  Q
    ||||| || |||| |||||||| ||||||| ||||||||  |||||| | ||||  ||| | ||||||||||| | || ||| ||||||||||||| |||    
T  41106 cactactgagtttagttcgtgggcataaatagtgggtggttcgatagcgcaaacttgatagcaggtggcccaatgaatcttggagaggctctgataccat 41205  T
Q  107 cttagaaat 115  Q
    |||||||||    
T  41206 cttagaaat 41214  T

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Target: scaffold0729 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 2680 - 2624
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacc 61  Q
    ||||||||| |||||||||||| ||||||||| | |||||| ||||||| |||||||    
T  2680 agcactattaggtttggttcgtagacataaatggggggtggcccgatagcggaaacc 2624  T

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Target: scaffold0047 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 12833 - 12706
Alignment:
Q  5 agcactattgggtttggttcgtggacataaatcgtgggtgggccgatagaggaaacccgatggaaggtggcccaacggatgttgaagaggctctgatatc 104  Q
    |||||||||| | |||||||||| |||||||| |||||||  ||||||| | || || ||| | |||||||||||   || ||| |||| | || ||| |    
T  12833 agcactattgagcttggttcgtgaacataaatggtgggtgttccgatagcgaaatcctgatagtaggtggcccaatttatcttggagagacgctaatacc 12734  T
Q  105 atcttagaaatggtgattgggcctaaca 132  Q
    |||||| |||| ||| ||||||||||||    
T  12733 atcttaaaaattgtggttgggcctaaca 12706  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 56581 - 56518
Alignment:
Q  69 aggtggcccaacggatgttgaagaggctctgatatcatcttagaaatggtgattgggcctaaca 132  Q
    ||||||||||| | ||  |||||||||||||||| ||| |||||||| ||| ||||||||||||    
T  56581 aggtggcccaaagaattgtgaagaggctctgataccatattagaaatcgtggttgggcctaaca 56518  T

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Target: scaffold0366 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 14589 - 14497
Alignment:
Q  7 cactattgggtttggttcgtggacataaatcgtgggtgggccgata-gaggaaacccgatggaaggtggcccaacggatgttgaagaggctct 98  Q
    |||||||||| ||||||| ||||||||||| |||||||  |||||| | ||||||| ||| | |||||| |||| |||| ||| |||| ||||    
T  14589 cactattgggcttggttcatggacataaatagtgggtgacccgataggcggaaacctgatagcaggtggtccaatggatcttggagagactct 14497  T

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