View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8811_low_9 (Length: 318)

Name: NF8811_low_9
Description: NF8811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8811_low_9
NF8811_low_9
[»] chr5 (4 HSPs)
chr5 (116-301)||(22190818-22191003)
chr5 (35-74)||(15409673-15409712)
chr5 (34-72)||(35943954-35943992)
chr5 (35-75)||(31008985-31009025)
[»] chr2 (9 HSPs)
chr2 (34-73)||(36168835-36168874)
chr2 (36-74)||(10249446-10249484)
chr2 (34-72)||(13438343-13438381)
chr2 (36-73)||(7465799-7465836)
chr2 (36-73)||(32505712-32505749)
chr2 (36-72)||(4060685-4060721)
chr2 (36-72)||(17473020-17473056)
chr2 (36-76)||(26891568-26891608)
chr2 (36-72)||(43490121-43490157)
[»] chr3 (6 HSPs)
chr3 (36-74)||(11907369-11907407)
chr3 (36-74)||(33118915-33118953)
chr3 (34-72)||(51419422-51419460)
chr3 (34-75)||(11347984-11348025)
chr3 (36-73)||(48375770-48375807)
chr3 (36-72)||(47531865-47531901)
[»] chr8 (7 HSPs)
chr8 (36-75)||(10284695-10284734)
chr8 (36-73)||(17443824-17443861)
chr8 (34-75)||(24307626-24307667)
chr8 (36-72)||(12831047-12831083)
chr8 (36-72)||(14055656-14055692)
chr8 (34-74)||(15258991-15259031)
chr8 (34-74)||(24307855-24307895)
[»] chr7 (6 HSPs)
chr7 (34-77)||(11044183-11044226)
chr7 (34-67)||(32951555-32951588)
chr7 (34-75)||(35468917-35468958)
chr7 (36-72)||(4999578-4999614)
chr7 (31-75)||(18207177-18207221)
chr7 (36-72)||(21234401-21234437)
[»] chr4 (7 HSPs)
chr4 (36-75)||(480511-480550)
chr4 (36-74)||(23608233-23608271)
chr4 (36-73)||(29234309-29234346)
chr4 (31-72)||(29535377-29535418)
chr4 (34-75)||(42044429-42044470)
chr4 (36-72)||(31910192-31910228)
chr4 (36-72)||(54473597-54473633)
[»] chr6 (1 HSPs)
chr6 (34-68)||(9379774-9379808)
[»] scaffold0321 (1 HSPs)
scaffold0321 (34-75)||(10171-10212)
[»] chr1 (1 HSPs)
chr1 (36-77)||(32813242-32813283)


Alignment Details
Target: chr5 (Bit Score: 166; Significance: 8e-89; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 116 - 301
Target Start/End: Complemental strand, 22191003 - 22190818
Alignment:
Q  116 atgcatgaatatacacaaacatatttatacaattaaaacagttatcattctcctttaattcccttaaaaacatttttccttgtgcagttttgttacacct 215  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||    
T  22191003 atgcatgaatttacacaaacatatttatacaattaaaacagttatcattctcctttaattcccttgaaaacattttttcttgtacagttttgttacacct 22190904  T
Q  216 actttcaccttcttcctttttcttcttctaattaagtaatatacaatttactctttgcaacttgcaactacagtaccatcttcatg 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22190903 actttcaccttcttcctttttcttcttctaattaagtaatatacaatttactctttgcaacttgcaactacagtaccatctccatg 22190818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 74
Target Start/End: Original strand, 15409673 - 15409712
Alignment:
Q  35 atgtattgtcatctaagggtgtctatgtatcataactctt 74  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  15409673 atgtattgtcacctaaggatgtctatgtatcataactctt 15409712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 35943954 - 35943992
Alignment:
Q  34 gatgtattgtcatctaagggtgtctatgtatcataactc 72  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  35943954 gatgtattgccacctaagggtgtctatgtatcataactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 31009025 - 31008985
Alignment:
Q  35 atgtattgtcatctaagggtgtctatgtatcataactcttt 75  Q
    ||||||||||| |||||| ||| ||||||||||||||||||    
T  31009025 atgtattgtcacctaaggatgtttatgtatcataactcttt 31008985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000003; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 36168874 - 36168835
Alignment:
Q  34 gatgtattgtcatctaagggtgtctatgtatcataactct 73  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  36168874 gatgtattgtcatctaaggatgtctatgtatcataactct 36168835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 10249446 - 10249484
Alignment:
Q  36 tgtattgtcatctaagggtgtctatgtatcataactctt 74  Q
    |||||||||| ||||||||||||||||||||| ||||||    
T  10249446 tgtattgtcacctaagggtgtctatgtatcattactctt 10249484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 13438381 - 13438343
Alignment:
Q  34 gatgtattgtcatctaagggtgtctatgtatcataactc 72  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  13438381 gatgtattgtcacctaagggtgtctatgtatcattactc 13438343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 7465799 - 7465836
Alignment:
Q  36 tgtattgtcatctaagggtgtctatgtatcataactct 73  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  7465799 tgtattgccatctaagggtgtctatgtatcattactct 7465836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 32505712 - 32505749
Alignment:
Q  36 tgtattgtcatctaagggtgtctatgtatcataactct 73  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  32505712 tgtattgtcacctaagggtgtctatgtatcattactct 32505749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 4060721 - 4060685
Alignment:
Q  36 tgtattgtcatctaagggtgtctatgtatcataactc 72  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  4060721 tgtattgtcacctaagggtgtctatgtatcattactc 4060685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 17473056 - 17473020
Alignment:
Q  36 tgtattgtcatctaagggtgtctatgtatcataactc 72  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  17473056 tgtattgccatctaagggtgtctatgtatcattactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 26891568 - 26891608
Alignment:
Q  36 tgtattgtcatctaagggtgtctatgtatcataactctttc 76  Q
    ||||||| || ||||||||| ||||||||||||||||||||    
T  26891568 tgtattgccacctaagggtggctatgtatcataactctttc 26891608  T

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Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 43490157 - 43490121
Alignment:
Q  36 tgtattgtcatctaagggtgtctatgtatcataactc 72  Q
    |||||||||| |||||||||| |||||||||||||||    
T  43490157 tgtattgtcacctaagggtgtttatgtatcataactc 43490121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.0000000001; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 11907407 - 11907369
Alignment:
Q  36 tgtattgtcatctaagggtgtctatgtatcataactctt 74  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  11907407 tgtattgtcacctaagggtgtctatgtatcataactctt 11907369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 33118915 - 33118953
Alignment:
Q  36 tgtattgtcatctaagggtgtctatgtatcataactctt 74  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  33118915 tgtattgtcacctaagggtgtctatgtatcataactctt 33118953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 51419422 - 51419460
Alignment:
Q  34 gatgtattgtcatctaagggtgtctatgtatcataactc 72  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  51419422 gatgtattgtcatctaaggatgtctatgtatcataactc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 11347984 - 11348025
Alignment:
Q  34 gatgtattgtcatctaagggtgtctatgtatcataactcttt 75  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  11347984 gatgtattgtcacctaaggatgtctatgtatcataactcttt 11348025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 48375770 - 48375807
Alignment:
Q  36 tgtattgtcatctaagggtgtctatgtatcataactct 73  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  48375770 tgtattgtcacctaagggtgtctatgaatcataactct 48375807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 47531901 - 47531865
Alignment:
Q  36 tgtattgtcatctaagggtgtctatgtatcataactc 72  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  47531901 tgtattgccatctaaggatgtctatgtatcataactc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000007; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 10284695 - 10284734
Alignment:
Q  36 tgtattgtcatctaagggtgtctatgtatcataactcttt 75  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  10284695 tgtattgtcacttaagggtgtctatgtatcataactcttt 10284734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 17443861 - 17443824
Alignment:
Q  36 tgtattgtcatctaagggtgtctatgtatcataactct 73  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  17443861 tgtattgtcacctaaggttgtctatgtatcataactct 17443824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 75
Target Start/End: Complemental strand, 24307667 - 24307626
Alignment:
Q  34 gatgtattgtcatctaagggtgtctatgtatcataactcttt 75  Q
    ||||||||| || |||||||||| ||||||||||||||||||    
T  24307667 gatgtattgccacctaagggtgtttatgtatcataactcttt 24307626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 12831083 - 12831047
Alignment:
Q  36 tgtattgtcatctaagggtgtctatgtatcataactc 72  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  12831083 tgtattgtcacctaagggtgtctatgtatcattactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 14055656 - 14055692
Alignment:
Q  36 tgtattgtcatctaagggtgtctatgtatcataactc 72  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  14055656 tgtattgtcacctaagggtgtcaatgtatcataactc 14055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 74
Target Start/End: Original strand, 15258991 - 15259031
Alignment:
Q  34 gatgtattgtcatctaagggtgtctatgtatcataactctt 74  Q
    ||||||||| |||||||| || |||||||||||||||||||    
T  15258991 gatgtattgccatctaagagtatctatgtatcataactctt 15259031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 74
Target Start/End: Original strand, 24307855 - 24307895
Alignment:
Q  34 gatgtattgtcatctaagggtgtctatgtatcataactctt 74  Q
    ||||||||| || |||||||||| |||||||||||||||||    
T  24307855 gatgtattgccacctaagggtgtttatgtatcataactctt 24307895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.000000007; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 34 - 77
Target Start/End: Complemental strand, 11044226 - 11044183
Alignment:
Q  34 gatgtattgtcatctaagggtgtctatgtatcataactctttca 77  Q
    ||||||||| || ||||||||||||||||||||| |||||||||    
T  11044226 gatgtattgccacctaagggtgtctatgtatcattactctttca 11044183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 67
Target Start/End: Original strand, 32951555 - 32951588
Alignment:
Q  34 gatgtattgtcatctaagggtgtctatgtatcat 67  Q
    |||||||||||||||||| |||||||||||||||    
T  32951555 gatgtattgtcatctaagagtgtctatgtatcat 32951588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 35468917 - 35468958
Alignment:
Q  34 gatgtattgtcatctaagggtgtctatgtatcataactcttt 75  Q
    ||||||||| ||||||||| |||||||||||||| |||||||    
T  35468917 gatgtattgccatctaaggatgtctatgtatcattactcttt 35468958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 4999578 - 4999614
Alignment:
Q  36 tgtattgtcatctaagggtgtctatgtatcataactc 72  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  4999578 tgtattgccatctaagggtgtctatgtatcattactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 18207221 - 18207177
Alignment:
Q  31 agagatgtattgtcatctaagggtgtctatgtatcataactcttt 75  Q
    |||| ||||||| || |||||| ||||||||||||||||||||||    
T  18207221 agaggtgtattgccacctaaggttgtctatgtatcataactcttt 18207177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 21234437 - 21234401
Alignment:
Q  36 tgtattgtcatctaagggtgtctatgtatcataactc 72  Q
    |||||||||| |||||| |||||||||||||||||||    
T  21234437 tgtattgtcacctaaggatgtctatgtatcataactc 21234401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.000000007; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 480511 - 480550
Alignment:
Q  36 tgtattgtcatctaagggtgtctatgtatcataactcttt 75  Q
    |||||||||| ||||||||||||||||||||| |||||||    
T  480511 tgtattgtcacctaagggtgtctatgtatcattactcttt 480550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 23608271 - 23608233
Alignment:
Q  36 tgtattgtcatctaagggtgtctatgtatcataactctt 74  Q
    ||||||||||||||||||||||||| |||||| ||||||    
T  23608271 tgtattgtcatctaagggtgtctatatatcattactctt 23608233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 29234309 - 29234346
Alignment:
Q  36 tgtattgtcatctaagggtgtctatgtatcataactct 73  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  29234309 tgtattgccatctaagggtgtctatgtatcattactct 29234346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 29535418 - 29535377
Alignment:
Q  31 agagatgtattgtcatctaagggtgtctatgtatcataactc 72  Q
    ||||||||||||||| |||||  |||||||||||||||||||    
T  29535418 agagatgtattgtcacctaagattgtctatgtatcataactc 29535377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 42044429 - 42044470
Alignment:
Q  34 gatgtattgtcatctaagggtgtctatgtatcataactcttt 75  Q
    ||||||||| || ||||||||||||||||||||| |||||||    
T  42044429 gatgtattgccacctaagggtgtctatgtatcattactcttt 42044470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 31910228 - 31910192
Alignment:
Q  36 tgtattgtcatctaagggtgtctatgtatcataactc 72  Q
    |||||||||| |||||| |||||||||||||||||||    
T  31910228 tgtattgtcacctaaggatgtctatgtatcataactc 31910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 54473597 - 54473633
Alignment:
Q  36 tgtattgtcatctaagggtgtctatgtatcataactc 72  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  54473597 tgtattgtcacctaagggtgtctatgtatcattactc 54473633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 68
Target Start/End: Original strand, 9379774 - 9379808
Alignment:
Q  34 gatgtattgtcatctaagggtgtctatgtatcata 68  Q
    ||||||||||||||||||| |||||||||||||||    
T  9379774 gatgtattgtcatctaaggatgtctatgtatcata 9379808  T

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Target: scaffold0321 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 10171 - 10212
Alignment:
Q  34 gatgtattgtcatctaagggtgtctatgtatcataactcttt 75  Q
    ||||||||| || |||| ||||||||||||||||||||||||    
T  10171 gatgtattgccacctaaaggtgtctatgtatcataactcttt 10212  T

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Target: chr1 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 32813283 - 32813242
Alignment:
Q  36 tgtattgtcatctaagggtgtctatgtatcataactctttca 77  Q
    ||||||| || |||||| ||||||||||||||||||||||||    
T  32813283 tgtattgccacctaaggatgtctatgtatcataactctttca 32813242  T

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