View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8813_low_7 (Length: 204)
Name: NF8813_low_7
Description: NF8813
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8813_low_7 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 10 - 195
Target Start/End: Original strand, 26694994 - 26695179
Alignment:
| Q |
10 |
gacatcatcattggcaatagcaacaggacgcttatgctttaaaggcggcggatacttgcccacagttgttgattctataatgttctgaggagggttacat |
109 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26694994 |
gacatcatcattggcaatagcaacaggacgcttatgctttaaaggcggcggatacttgcccacagttgttgattctataatgttctgaggagggttacat |
26695093 |
T |
|
| Q |
110 |
aacatatatgtttcagaagcttgatcaagtgtactcggaagaggagcttgcggatacaaagcaaggtgagaatttatgttgatgtc |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26695094 |
aacatatatgtttcagaagcttgatcaagtgtactcggaagaggagcttgcggatacaaagcaaggtgagaatttatgttgatgtc |
26695179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University