View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8820_low_3 (Length: 662)
Name: NF8820_low_3
Description: NF8820
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8820_low_3 |
 | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
| [»] scaffold0199 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 582; Significance: 0; HSPs: 35)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 582; E-Value: 0
Query Start/End: Original strand, 18 - 648
Target Start/End: Original strand, 4488767 - 4489397
Alignment:
| Q |
18 |
aaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacc |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
4488767 |
aaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggatttcacataacc |
4488866 |
T |
|
| Q |
118 |
tttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgatg |
217 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
4488867 |
tttgtcaacactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttaactgattttagctttgagactattccagatg |
4488966 |
T |
|
| Q |
218 |
gtttaactccaacagatggtgatggcgatgttagtcaagatttacgtgctctttgtctatcaatcatgaacaattttccccaattctttggtgtatttct |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
4488967 |
gtttaactccaacagatggtgatggcgatgttagtcaagatttacgcgctctttgtctatcaatcatgaacaattttcaccaattctttggtgtatttct |
4489066 |
T |
|
| Q |
318 |
tgctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgattgcaatatggcatttacagtagatgctgctgaagaa |
417 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4489067 |
tgctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgattgcaatatggcatttacagtagatgctgctgaagaa |
4489166 |
T |
|
| Q |
418 |
catgcactcccaattgttctcttttccccatgtagtgcatcttacttctactctacttttcacattactaaattgtttcagaatggtgtgctaccactca |
517 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4489167 |
catgcactcccaattgttctcttttccccatgtagtgcatcttacttctactctacttttcacattactaaattgtttcagaatggtgtgctaccactca |
4489266 |
T |
|
| Q |
518 |
aaggtaatcattatgttccctttttcatcctaagggaggtatgttgtgtgtgtacatgtatgtctgcatcaaggtttttcnnnnnnnggattgtgagcgc |
617 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4489267 |
aaggtaatcattatgttccctttttcatcctaagggaggtatgttgtgtgtgtacatgtatgtctgcatcaaggtttttcacaaaaaggattgtgagcgc |
4489366 |
T |
|
| Q |
618 |
aatatgggccgaacacaaccgttttgatgtc |
648 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
4489367 |
aatatgggccgaacacaaccgttttgatgtc |
4489397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 98 - 580
Target Start/End: Original strand, 4502943 - 4503421
Alignment:
| Q |
98 |
ttagaggcttttacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttag |
197 |
Q |
| |
|
||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
4502943 |
ttagaggatttcacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcaatgattttac |
4503042 |
T |
|
| Q |
198 |
ctttgagactattcctgatggtttaactccaacagatggtgatggcgatgttagtcaagatttacgtgctctttgtctatcaatcatgaacaattttccc |
297 |
Q |
| |
|
||||||||| || || |||||||||||||| || |||||||| |||||||||||||| ||||| ||||| | ||||||||||| ||| ||||||| | |
|
|
| T |
4503043 |
ctttgagaccataccagatggtttaactccggtggaaggtgatggtgatgttagtcaagacttacgcgctctctatctatcaatcaagaagaattttcac |
4503142 |
T |
|
| Q |
298 |
caattctttggtgtatttcttgctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgattgcaatatggcattta |
397 |
Q |
| |
|
||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |
|
|
| T |
4503143 |
caattctttggtgaatttcttgttaaacttaatgactctgccactgctggtcttatccctccagttacttgcttagtttctgattgcaacatgccatttc |
4503242 |
T |
|
| Q |
398 |
cagtagatgctgctgaagaacatgcactcccaattgttctcttttccccatgtagtgcatcttacttctactctacttttcacattactaaattgtttca |
497 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4503243 |
cagtatatgctgctgaagaacatacactcccaattgttctcgtttccccatgtagtgcatcttacttctactctacttttcacattgctaaattgtttca |
4503342 |
T |
|
| Q |
498 |
gaatggtgtgctaccactcaaaggtaatcattatgttccctttttcatcctaagggaggtatgttgtgtgtgtacatgtatgt |
580 |
Q |
| |
|
||| || |||||||||||||||||||| ||||||||| ||||||| |||| | ||||||||||||||| |||||||||| |
|
|
| T |
4503343 |
caatagtatgctaccactcaaaggtaattattatgttcactttttcttcct----ggggtatgttgtgtgtgaacatgtatgt |
4503421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 22 - 525
Target Start/End: Complemental strand, 3173557 - 3173054
Alignment:
| Q |
22 |
ccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttg |
121 |
Q |
| |
|
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
3173557 |
ccacatgcagtgttaactccatatccagttcaaggccatatcaatgcattgttgaaactagcaaaactacttcactttagaggctttcacataacctttg |
3173458 |
T |
|
| Q |
122 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgatggttt |
221 |
Q |
| |
|
| ||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||| || |||||||| |
|
|
| T |
3173457 |
taaacactgaatacaatcacaaacggttgctcaaatcaaagggtccaaatgcctttgatggtttcaatgattttaactttgagactataccagatggttt |
3173358 |
T |
|
| Q |
222 |
aactccaacagatggtgatggcgatgttagtcaagatttacgtgctctttgtctatcaatcatgaacaattttccccaattctttggtgtatttcttgct |
321 |
Q |
| |
|
|||| ||| || |||||||| |||||||||||||| ||||| |||||||||| ||||||||| || || |||| | || ||| ||| | || ||||| |
|
|
| T |
3173357 |
aacttcaatggaaggtgatggtgatgttagtcaagacttacgcgctctttgtcgatcaatcatcaagaactttcatcgcttttttcgtgaactttttgct |
3173258 |
T |
|
| Q |
322 |
aaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgattgcaatatggcatttacagtagatgctgctgaagaacatg |
421 |
Q |
| |
|
|||||| | || ||||| |||||||||||||| ||||||||||||||||| ||||| |||||| ||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
3173257 |
aaacttcacgattctgcaactgctggtcttatacctccagttacttgctttgtttccgattgctatatgccatttacagtagatgttgctgaagaacatg |
3173158 |
T |
|
| Q |
422 |
cactcccaattgttctcttttccccatgtagtgcatcttacttctactctacttttcacattactaaattgtttcagaatggtgtgctaccactcaaagg |
521 |
Q |
| |
|
| |||||||||||||| ||||| || |||||||||| || ||||| || |||||| ||| |||||||||||||||||||| | |||||||||||||| |
|
|
| T |
3173157 |
ctctcccaattgttctattttcgccgtgtagtgcatgtttcttcttggctggttttcatattcctaaattgtttcagaatggtctactaccactcaaagg |
3173058 |
T |
|
| Q |
522 |
taat |
525 |
Q |
| |
|
|||| |
|
|
| T |
3173057 |
taat |
3173054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 17 - 543
Target Start/End: Complemental strand, 4482424 - 4481896
Alignment:
| Q |
17 |
aaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataac |
116 |
Q |
| |
|
|||| |||||||||||||| || |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4482424 |
aaaaaccacatgcagtgttgactccatttccagctcaaggccatatcaatgcattgttgaaaataggaaaactacttcaccttagaggctttcacataac |
4482325 |
T |
|
| Q |
117 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgat |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| |||||||| |||||||| ||||||||||||||||||||||||| |||||| || || || ||| |
|
|
| T |
4482324 |
ctttgtcaacaccgaatacaatcacaaacgtttgctaaaatcaaggggtccaaaagcctttgatggtttcactgattttacctttgaaacgataccagat |
4482225 |
T |
|
| Q |
217 |
ggtttaactccaacagatggtgatggcgatgttagtcaagatttacgtgctctttgtctatcaatcatgaacaattttccccaattctttggtgtatttc |
316 |
Q |
| |
|
||||||||||||| || ||||||| || || |||||||| ||| ||||| || ||||||||||| || |||| ||| ||||||| || ||||| |
|
|
| T |
4482224 |
ggtttaactccaattgaaggtgatgatgaagtaagtcaagacttattctctcttactcaatcaatcatgacgaactttcgccacttctttgatgaatttc |
4482125 |
T |
|
| Q |
317 |
ttgctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgattgcaatatggcatttacagtagatgctgctgaaga |
416 |
Q |
| |
|
| ||||||||| |||| ||||| ||||||||| ||||||| ||||| ||||||||||||||||||||| | ||| ||||||||||||||||||| ||||| |
|
|
| T |
4482124 |
tggctaaacttcatgaatctgccactgctggtattatccccccagtcacttgcttagtttctgattgctacatgccatttacagtagatgctgccgaaga |
4482025 |
T |
|
| Q |
417 |
acatgcactcccaattgttctcttttccccatgtagtgcatcttacttctactctacttttcacattactaaattgtttcagaatggtgtgctaccactc |
516 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||| |||||| |||||||| | ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
4482024 |
acatgcactcccaattgttctcttttccccggtcagtgcatgttacttactctctacttctttgattcctaaattgtttcagaatggtgtgctaccactc |
4481925 |
T |
|
| Q |
517 |
aaaggta-atca-ttatgttccctttttc |
543 |
Q |
| |
|
||||||| |||| |||||||| ||||||| |
|
|
| T |
4481924 |
aaaggtatatcatttatgttctctttttc |
4481896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 17 - 466
Target Start/End: Complemental strand, 4576014 - 4575565
Alignment:
| Q |
17 |
aaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataac |
116 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||| ||||||| |
|
|
| T |
4576014 |
aaaagccacatgcagtgttaactccatttccagttcaaggccatatcaatgcattgttgaaaatagcaaaactgcttcaccttagaggctttcacataac |
4575915 |
T |
|
| Q |
117 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgat |
216 |
Q |
| |
|
|||||| ||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||| || ||| |
|
|
| T |
4575914 |
ctttgttaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcactgactttaactttgagactataccagat |
4575815 |
T |
|
| Q |
217 |
ggtttaactccaacagatggtgatggcgatgttagtcaagatttacgtgctctttgtctatcaatcatgaacaattttccccaattctttggtgtatttc |
316 |
Q |
| |
|
||||||||||||| |||||| |||| ||||| |||||||| ||| ||||| || ||||||||| | || |||| ||| ||||||| || | ||| |
|
|
| T |
4575814 |
ggtttaactccaaaggatggtaatggtgatgtaagtcaagacctacactctcttggtgaatcaatcataacgaactttcgccacttctttgatgaacttc |
4575715 |
T |
|
| Q |
317 |
ttgctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgattgcaatatggcatttacagtagatgctgctgaaga |
416 |
Q |
| |
|
||||||||||| | |||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| | ||| ||||||||||||||||||||||||| |
|
|
| T |
4575714 |
ttgctaaacttcaagactctgccactgctggtcttatccccccagtcacttgcttagtttctgattgctacatgccatttacagtagatgctgctgaaga |
4575615 |
T |
|
| Q |
417 |
acatgcactcccaattgttctcttttccccatgtagtgcatcttacttct |
466 |
Q |
| |
|
|||||| |||||||||||||| ||||||||||||||||||| ||| |||| |
|
|
| T |
4575614 |
acatgccctcccaattgttcttttttccccatgtagtgcatgttatttct |
4575565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 21 - 543
Target Start/End: Complemental strand, 4562221 - 4561694
Alignment:
| Q |
21 |
gccacatgcagtg----ttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacat-aa |
115 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||| ||| |||||| |||||||| ||||||||| |||| || |
|
|
| T |
4562221 |
gccacatgcagtgttaattaactccatttccagttcaaggtcatatcaatgcattgttgaaaatagcaaaactgcttcacctaagaggctttcacataaa |
4562122 |
T |
|
| Q |
116 |
cctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctga |
215 |
Q |
| |
|
||||||| ||||| ||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||| |||| |||||||||||| || || |
|
|
| T |
4562121 |
cctttgttaacactgaatacaatcacaaacgtttgct-aaatcaagaggtgaaaatgcctttgatggtttcactgactttaactttgagactataccaga |
4562023 |
T |
|
| Q |
216 |
tggtttaactccaacagatggtgatggcgatgttagtcaagatttacgtgctctttgtctatcaatcatgaacaattttccccaattctttggtgtattt |
315 |
Q |
| |
|
|||||||||||||| ||||||||||| ||| |||||||||| ||| ||||| || ||||||||| | || |||| ||| ||||||| || | || |
|
|
| T |
4562022 |
tggtttaactccaaaggatggtgatggtgatattagtcaagacctacactctcttggtgaatcaatcataacgaactttcaccacttctttgatgaactt |
4561923 |
T |
|
| Q |
316 |
cttgctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgattgcaatatggcatttacagtagatgctgctgaag |
415 |
Q |
| |
|
|||||||||||| | |||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| | ||| |||||||||||| ||||||||||| |
|
|
| T |
4561922 |
cttgctaaacttcaagactctgccactgctggtcttatccccccagtcacttgcttagtttctgattgctacatgccatttacagtagctgctgctgaag |
4561823 |
T |
|
| Q |
416 |
aacatgcactcccaattgttctcttttccccatgtagtgcatcttacttctactctacttttcacattactaaattgtttcagaatggtgtgctaccact |
515 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||| |||| |||| ||| |||| || ||| | || | ||||| ||| ||||||| || |||||| | |
|
|
| T |
4561822 |
aacatgcactcccagttgttcttttttccccaagtagagcatgttatttcttggcttgtttgctcagtcctaaaatgtatcagaatagtcaactaccatt |
4561723 |
T |
|
| Q |
516 |
caaaggtaatca-ttatgttccctttttc |
543 |
Q |
| |
|
|||||||||||| || ||||||||||||| |
|
|
| T |
4561722 |
caaaggtaatcatttctgttccctttttc |
4561694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 17 - 381
Target Start/End: Complemental strand, 4558684 - 4558320
Alignment:
| Q |
17 |
aaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataac |
116 |
Q |
| |
|
|||| |||||||| ||||||| |||| |||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||||| ||| ||||||| |
|
|
| T |
4558684 |
aaaaaccacatgctgtgttaattccatatccagttcaaggccatatcaatccattgttgaaactagcaaaacttcttcaccttagaggatttcacataac |
4558585 |
T |
|
| Q |
117 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgat |
216 |
Q |
| |
|
|| ||| ||||| |||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
4558584 |
ctatgtaaacactgaatacaaccacaaacggttgctcaagtcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattccggat |
4558485 |
T |
|
| Q |
217 |
ggtttaactccaacagatggtgatggcgatgttagtcaag--atttacgtgctctttgtctatcaatcatgaacaattttccccaattctttggtgtatt |
314 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||| |||||||| || || || | ||| || | | | | |
|
|
| T |
4558484 |
ggtttaactccaacggatggtgatggcgatgttagtcaagacatttac--gctctttgtaaatcaatcagaaagaacttcctacaacctttccgcgaact |
4558387 |
T |
|
| Q |
315 |
tcttgctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgat |
381 |
Q |
| |
|
|||||||| ||| ||||||||||| || |||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
4558386 |
tcttgctagactaaatgactctgcaacatctggtcttgtccctccagttacttgcatagtttctgat |
4558320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 19 - 443
Target Start/End: Complemental strand, 4627707 - 4627283
Alignment:
| Q |
19 |
aagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacct |
118 |
Q |
| |
|
||||||||||| ||||| | ||||||||| ||||||||||||||||| ||||||||| ||||| |||| |||||||||||||||||||| ||||||||| |
|
|
| T |
4627707 |
aagccacatgctgtgttgattccatttccacttcaaggccatatcaatccattgttgatactagcaaaattacttcaccttagaggctttcacataacct |
4627608 |
T |
|
| Q |
119 |
ttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgatgg |
218 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||| || || ||||| |
|
|
| T |
4627607 |
ttgtcaacactgaatacaatcacaaacgtttgctcaaatcaagaggtgaaaatgcctttgatggtttcgatgattttacctttgagaccataccagatgg |
4627508 |
T |
|
| Q |
219 |
tttaactccaacagatggtgatggcgatgttagtcaagatttacgtgctctttgtctatcaatcatgaacaattttccccaattctttggtgtatttctt |
318 |
Q |
| |
|
|||||| ||| ||| |||||||||||||||| |||||| ||| |||||| | |||||| | || || || | || |||||||| | ||||| |
|
|
| T |
4627507 |
tttaacaccactagaaggtgatggcgatgttactcaagacataccatctctttcccaatcaataagaaagaacttccttcagccctttggtgaacttctt |
4627408 |
T |
|
| Q |
319 |
gctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgattgcaatatggcatttacagtagatgctgctgaagaac |
418 |
Q |
| |
|
||||||||| ||||||| || |||||||||||| | | |||||||||||||||||||| ||||| ||| ||||||| || | ||||||||||||| |
|
|
| T |
4627407 |
gctaaacttcatgactcagccactgctggtcttgttgcaccagttacttgcttagtttcagattgtttaatgtcatttaccatacaagctgctgaagaac |
4627308 |
T |
|
| Q |
419 |
atgcactcccaattgttctcttttc |
443 |
Q |
| |
|
||||||||||||||| ||||||||| |
|
|
| T |
4627307 |
atgcactcccaattgctctcttttc |
4627283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 160; E-Value: 6e-85
Query Start/End: Original strand, 17 - 456
Target Start/End: Complemental strand, 4623866 - 4623427
Alignment:
| Q |
17 |
aaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataac |
116 |
Q |
| |
|
||||||||||||| ||||| | ||| |||||||||||| ||||||||| ||||||| ||||||| ||| || ||| |||||| ||||||| ||||||| |
|
|
| T |
4623866 |
aaaagccacatgctgtgttgattgcatatccagttcaaggtcatatcaatccattgttcaaactagcaaagcttctttaccttaaaggctttcacataac |
4623767 |
T |
|
| Q |
117 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgat |
216 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| ||||||||| ||||| ||| |
|
|
| T |
4623766 |
ctttggtcacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaggcctttgatggtttcacggactttaactttgagaccattccagat |
4623667 |
T |
|
| Q |
217 |
ggtttaactccaacagatggtgatggcgatgttagtcaagatttacgtgctctttgtctatcaatcatgaacaattttccccaattctttggtgtatttc |
316 |
Q |
| |
|
|||||||| |||| || |||||||| |||||||||||||| ||| |||||| | ||||| | ||| ||||| || |||| ||| | ||| |
|
|
| T |
4623666 |
ggtttaacaccaatggaaggtgatggtgatgttagtcaagacataccctctctttctgattcaataaggaagaatttctatcatcccttttgtgaacttc |
4623567 |
T |
|
| Q |
317 |
ttgctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgattgcaatatggcatttacagtagatgctgctgaaga |
416 |
Q |
| |
|
|||| |||||| |||||||||| |||||||||||| | || |||||||||||||||||||| ||||| | ||| |||||||| || | ||||||||||| |
|
|
| T |
4623566 |
ttgcaaaacttcatgactctgccactgctggtcttgttccaccagttacttgcttagtttccgattgttacatgtcatttacaatacaagctgctgaaga |
4623467 |
T |
|
| Q |
417 |
acatgcactcccaattgttctcttttccccatgtagtgca |
456 |
Q |
| |
|
|||||||||||||||||| |||| |||||| ||||||| |
|
|
| T |
4623466 |
gcatgcactcccaattgttttcttctccccagctagtgca |
4623427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 19 - 257
Target Start/End: Complemental strand, 4517897 - 4517659
Alignment:
| Q |
19 |
aagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacct |
118 |
Q |
| |
|
||||||||||||||| |||| |||| |||| ||||||||||||||||| | ||||| ||||||| |||||| ||||| |||||||||||| ||||||||| |
|
|
| T |
4517897 |
aagccacatgcagtgataactccatatccacttcaaggccatatcaatccgttgttaaaactagcaaaacttcttcatcttagaggctttcacataacct |
4517798 |
T |
|
| Q |
119 |
ttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgatgg |
218 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
4517797 |
ttgtcaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatgg |
4517698 |
T |
|
| Q |
219 |
tttaactccaacagatggtgatggcgatgttagtcaaga |
257 |
Q |
| |
|
||||||||| | ||| || ||||| |||||||||||||| |
|
|
| T |
4517697 |
tttaactccgatagaaggcgatggtgatgttagtcaaga |
4517659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 18 - 523
Target Start/End: Complemental strand, 4471472 - 4470970
Alignment:
| Q |
18 |
aaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacc |
117 |
Q |
| |
|
|||||||||||| || || | |||| ||||| |||||||||||||||||||||||||||||||| ||| || |||||||||||||||||| ||||||| |
|
|
| T |
4471472 |
aaagccacatgctgtattgattccatgtccagctcaaggccatatcaatgcattgttgaaactagcaaagcttcttcaccttagaggctttcacataacg |
4471373 |
T |
|
| Q |
118 |
tttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgatg |
217 |
Q |
| |
|
||||||||||| ||||||||||||||| ||||||||| ||||||||||| || | |||||||||||||||| |||| ||||||||| ||||| ||| |
|
|
| T |
4471372 |
tttgtcaacactgaatacaatcacaaagccttgctcaattcaagaggtcctgattctcttgatggtttcactgactttaactttgagaccattccaaatg |
4471273 |
T |
|
| Q |
218 |
gtttaactccaacagatggtgatggcgatgttagtcaagatttacgtgctctttgtctatcaatcatgaacaattttccccaattctttggtgtatttct |
317 |
Q |
| |
|
|||| ||| ||| || | ||| ||| ||| |||||| ||| | ||| || ||||||||||| | || | ||| |||||||| | |||| |
|
|
| T |
4471272 |
gttttactgcaatggaaag---tggtgatcttattcaagacatacactccttttttcgatcaatcatgacggacttccttcaaccctttggtgaacttct |
4471176 |
T |
|
| Q |
318 |
tgctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgattgcaatatggcatttacagtagatgctgctgaagaa |
417 |
Q |
| |
|
| ||| |||| ||| |||||| |||||||||||||||||||||||||||||| || |||||||||| | ||| |||||||||||||||||||||||||| |
|
|
| T |
4471175 |
tactagacttgatgcctctgccactgctggtcttatccctccagttacttgcataatttctgattgttacatgccatttacagtagatgctgctgaagaa |
4471076 |
T |
|
| Q |
418 |
catgcactcccaattgttctcttttccccatgtagtgcatcttacttctactctacttttcacattactaaattgtttcagaatggtgtgctaccactca |
517 |
Q |
| |
|
| |||||||||||| ||||||||||| || || |||| || || | |||||| ||||||| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
4471075 |
cgtgcactcccaatcgttctcttttctccggtcagcgcatgttgctcactcactacttctcacattcctaaattgtttcagaatggtgtgctgccactca |
4470976 |
T |
|
| Q |
518 |
aaggta |
523 |
Q |
| |
|
|||||| |
|
|
| T |
4470975 |
aaggta |
4470970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 17 - 381
Target Start/End: Complemental strand, 4572525 - 4572161
Alignment:
| Q |
17 |
aaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataac |
116 |
Q |
| |
|
|||| |||||||| ||||||| |||| |||||||||||||||||||||| |||||||| |||||| |||| | |||||||||||||| ||| ||||||| |
|
|
| T |
4572525 |
aaaaaccacatgctgtgttaatcccatatccagttcaaggccatatcaatccattgttgcaactagcaaaatttcttcaccttagaggttttcacataac |
4572426 |
T |
|
| Q |
117 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgat |
216 |
Q |
| |
|
|| ||| ||||| ||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||| |||||| |||||||| |||||| ||| |
|
|
| T |
4572425 |
ctatgtaaacactgaatacaatcacaaacggttgctcaagtcaagaggtcaaaatgcctttgatggtttcaccaattttaactttgagagtattccagat |
4572326 |
T |
|
| Q |
217 |
ggtttaactccaacagatggtgatggcgatgttagtcaag--atttacgtgctctttgtctatcaatcatgaacaattttccccaattctttggtgtatt |
314 |
Q |
| |
|
|||||| ||||||| ||||| ||||||||||||||||||| |||||| ||||||||| |||||||| ||| ||||||| ||| || | | | | |
|
|
| T |
4572325 |
ggtttatctccaacggatggcgatggcgatgttagtcaagacatttac--gctctttgtaaatcaatcaggaagaattttctacaacctttccgcgaact |
4572228 |
T |
|
| Q |
315 |
tcttgctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgat |
381 |
Q |
| |
|
|||||||| ||||||||||||||| || |||||||| ||| |||||||| |||| ||||||||||| |
|
|
| T |
4572227 |
tcttgctagacttaatgactctgcaacatctggtcttgtccgtccagttagttgcatagtttctgat |
4572161 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 17 - 381
Target Start/End: Complemental strand, 4581573 - 4581209
Alignment:
| Q |
17 |
aaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataac |
116 |
Q |
| |
|
||||||||||||||||||| | |||| |||| ||||||| ||||||| | |||| | | ||||| ||| || |||||||||||||||||| ||||||| |
|
|
| T |
4581573 |
aaaagccacatgcagtgttgattccatatccacttcaaggacatatcactccattaataacactagcaaagcttcttcaccttagaggctttcacataac |
4581474 |
T |
|
| Q |
117 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgat |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||| ||||||||||||||| ||| |
|
|
| T |
4581473 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaaagcgtttgatggtttcaccgattttacctttgagactattccagat |
4581374 |
T |
|
| Q |
217 |
ggtttaactccaacagatggtgatggcgatgttagtcaagatttacgtgctctttgtctatcaatcatgaacaattttccccaattctttggtgtatttc |
316 |
Q |
| |
|
||||||||||| | ||| || ||| | ||||||| |||||| || |||||| ||| |||||||| || || || | ||| ||| ||| | ||| |
|
|
| T |
4581373 |
ggtttaactccgatagaaggcgatagtgatgttaatcaagacatatatgctctatgtgaatcaatcagaaagaacttcctacaacctttttgtgaacttc |
4581274 |
T |
|
| Q |
317 |
ttgctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgat |
381 |
Q |
| |
|
|||||| ||||||||||||||| ||| |||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
4581273 |
ttgctagacttaatgactctgccacttctggtcttgtccctccagttacttgcatagtttctgat |
4581209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 25 - 381
Target Start/End: Complemental strand, 4587183 - 4586827
Alignment:
| Q |
25 |
catgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtca |
124 |
Q |
| |
|
||||| ||||||| |||| |||||||||||||||||||||| ||||||||||||||| ||||| ||||||||| |||| ||| ||||||||||||| | |
|
|
| T |
4587183 |
catgctgtgttaatcccatctccagttcaaggccatatcaatccattgttgaaactagctaaacttcttcaccttcgaggatttcacataacctttgtaa |
4587084 |
T |
|
| Q |
125 |
acaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgatggtttaac |
224 |
Q |
| |
|
|||| ||||||||||||||||| ||||| || ||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4587083 |
acactgaatacaatcacaaacggttgcttaagtcaagagctccaaatgcctttgatgatttaactgattttagctttgagactattccagatggtttaac |
4586984 |
T |
|
| Q |
225 |
tccaacagatggtgatggcgatgttagtcaag--atttacgtgctctttgtctatcaatcatgaacaattttccccaattctttggtgtatttcttgcta |
322 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||| |||||| ||||||||| |||||||| || || || | ||| || | | | ||||||||| |
|
|
| T |
4586983 |
tccaacggatggtgatggtgatgttagtcaagacatttac--gctctttgtaaatcaatcagaaagaacttcctacaacctttccgcgaacttcttgcta |
4586886 |
T |
|
| Q |
323 |
aacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgat |
381 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
4586885 |
gacttaatgactctgcaacatctggtcttatccctccagtcacttgtatagtttctgat |
4586827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 40 - 279
Target Start/End: Complemental strand, 4618837 - 4618598
Alignment:
| Q |
40 |
ccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaatacaatc |
139 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||| ||||||| ||| || |||||||||||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
4618837 |
ccatatccagttcaaggccatatcaatccattgttcaaactagcaaagcttcttcaccttagaggctttcacataacctttgttaacaccgaatacaatc |
4618738 |
T |
|
| Q |
140 |
acaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgatggtttaactccaacagatggtga |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||| || |||||||||||||| || |||| |||||||| ||||| ||||||||||| |||| || ||||| |
|
|
| T |
4618737 |
acaaacgcttgctcaaatcaagaggtccaaaggcttttgatggtttcacggactttaactttgagagcattccagatggtttaacaccaatggaaggtga |
4618638 |
T |
|
| Q |
240 |
tggcgatgttagtcaagatttacgtgctctttgtctatca |
279 |
Q |
| |
|
||| ||||||||||||||| ||| ||||||||| |||| |
|
|
| T |
4618637 |
tggtgatgttagtcaagatgtaccaactctttgtcaatca |
4618598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 35 - 257
Target Start/End: Complemental strand, 4569611 - 4569393
Alignment:
| Q |
35 |
taacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaata |
134 |
Q |
| |
|
|||| |||| |||| ||||||||||||||||| |||| |||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
4569611 |
taactccatatccacttcaaggccatatcaatccattattgaaactagcaaaacttcttcaccttagaggctttcacataacctttgtcaacaccgaa-- |
4569514 |
T |
|
| Q |
135 |
caatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgatggtttaactccaacagat |
234 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
4569513 |
--atcacaaacatttgctcaaatcaagaggtccaaaagcctttgatggtttcactgattttacctttgagactattccagatggtttaactccgacagaa |
4569416 |
T |
|
| Q |
235 |
ggtgatggcgatgttagtcaaga |
257 |
Q |
| |
|
||| |||| ||| |||||||||| |
|
|
| T |
4569415 |
ggttatggtgatattagtcaaga |
4569393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 22 - 242
Target Start/End: Original strand, 4513553 - 4513773
Alignment:
| Q |
22 |
ccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttg |
121 |
Q |
| |
|
|||||||| ||||| | |||| |||| ||||||||||||||||| || |||| | | ||| ||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4513553 |
ccacatgctgtgttgattccatatccacttcaaggccatatcaatccaatgttcagattagcaaaactacttcaccttagaggctttcacataacctttg |
4513652 |
T |
|
| Q |
122 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgatggttt |
221 |
Q |
| |
|
| ||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
4513653 |
ttaacaccgaatacaatcacaaacgtttgctcaaatcaagaggtcctaatgcttttgatggtttcaccgattttcgctttgagactattcctgatggttt |
4513752 |
T |
|
| Q |
222 |
aactccaacagatggtgatgg |
242 |
Q |
| |
|
|||||||| ||||| ||||| |
|
|
| T |
4513753 |
aactccaatggatggcgatgg |
4513773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 22 - 219
Target Start/End: Original strand, 4612292 - 4612489
Alignment:
| Q |
22 |
ccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttg |
121 |
Q |
| |
|
|||||||||||||||| |||| |||||||||||||||||||||| |||| | ||||||| |||||| |||||||||||||||||| ||||||| || | |
|
|
| T |
4612292 |
ccacatgcagtgttaattccatatccagttcaaggccatatcaatccattaatcaaactagcaaaacttcttcaccttagaggctttcacataacattcg |
4612391 |
T |
|
| Q |
122 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgatggt |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||| || |||||| |
|
|
| T |
4612392 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgttggtttcactgattttacctttgaggctataccagatggt |
4612489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 22 - 250
Target Start/End: Complemental strand, 4507465 - 4507237
Alignment:
| Q |
22 |
ccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttg |
121 |
Q |
| |
|
|||||||| ||||| | |||| |||| |||||||||||||||| ||||||| ||||||| || || ||||||||| |||||||| |||||||||||| |
|
|
| T |
4507465 |
ccacatgctgtgttgattccatatccaactcaaggccatatcaatccattgttcaaactagctaagcttcttcaccttcgaggctttcacataacctttg |
4507366 |
T |
|
| Q |
122 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgatggttt |
221 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| | || |||||||| |
|
|
| T |
4507365 |
ttaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtgaaaatgcctttgatggtttcactgattttaactttgagactctaccagatggttt |
4507266 |
T |
|
| Q |
222 |
aactccaacagatggtgatggcgatgtta |
250 |
Q |
| |
|
|||||||| ||||||||||| ||||||| |
|
|
| T |
4507265 |
aactccaatggatggtgatggtgatgtta |
4507237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 18 - 459
Target Start/End: Original strand, 4265627 - 4266068
Alignment:
| Q |
18 |
aaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacc |
117 |
Q |
| |
|
|||||||||||| ||||| | ||| |||| ||||||||||||||||||||||||| || |||||||| || |||||||||||||||||| |||||||| |
|
|
| T |
4265627 |
aaagccacatgctgtgttgattccagctccatttcaaggccatatcaatgcattgttcaatctaggaaagcttcttcaccttagaggctttcacataacc |
4265726 |
T |
|
| Q |
118 |
tttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgatg |
217 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||| |||| |||||||| || || |||| |
|
|
| T |
4265727 |
tttgtcaacactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaattctcttgatggtttcagtgactttaagtttgagaccataccagatg |
4265826 |
T |
|
| Q |
218 |
gtttaactccaacagatggtgatggcgatgttagtcaagatttacgtgctctttgtctatcaatcatgaacaattttccccaattctttggtgtatttct |
317 |
Q |
| |
|
|| ||||||||| || || |||| |||| || |||||| || ||||| | ||||||||||| || || | ||| ||||| || | |||| |
|
|
| T |
4265827 |
gtctaactccaatggaaggcaatggtgatgctactcaagacatataccctcttgtgcaatcaatcatgacgaacttccttcaaccctttgatgaacttct |
4265926 |
T |
|
| Q |
318 |
tgctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgattgcaatatggcatttacagtagatgctgctgaagaa |
417 |
Q |
| |
|
| ||| |||| || | ||||| | || |||| |||| || ||| |||||||||| ||||| ||||| | ||| | |||||| |||||||||| |||||| |
|
|
| T |
4265927 |
tactagacttcatcaatctgccaatgatggttttattccaccaattacttgcttggtttccgattgttacatgccttttacaatagatgctgcggaagaa |
4266026 |
T |
|
| Q |
418 |
catgcactcccaattgttctcttttccccatgtagtgcatct |
459 |
Q |
| |
|
|||||||||||||| || ||||||| ||||| | ||||||| |
|
|
| T |
4266027 |
catgcactcccaatccttttcttttctccatgcaatgcatct |
4266068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 17 - 440
Target Start/End: Original strand, 4258745 - 4259168
Alignment:
| Q |
17 |
aaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataac |
116 |
Q |
| |
|
||||||||||||| ||||| | |||| ||||| |||||||||||||||| ||||||| ||||||| || || |||||| ||| ||| ||| ||||||| |
|
|
| T |
4258745 |
aaaagccacatgctgtgttgattccatatccagctcaaggccatatcaatccattgttcaaactagctaagcttcttcactttaaaggttttcacataac |
4258844 |
T |
|
| Q |
117 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgat |
216 |
Q |
| |
|
|||||||||||| ||||| ||||||||||| |||||||||||||||||| ||||||| |||||||||||| |||||||| |||||||||||||| ||| |
|
|
| T |
4258845 |
ctttgtcaacactgaatataatcacaaacgtttgctcaaatcaagaggtgaaaatgccgttgatggtttcattgattttacctttgagactattcaagat |
4258944 |
T |
|
| Q |
217 |
ggtttaactccaacagatggtgatggcgatgttagtcaagatttacgtgctctttgtctatcaatcatgaacaattttccccaattctttggtgtatttc |
316 |
Q |
| |
|
||| | |||||| || |||||||||||||||| |||||| ||| | |||| || ||| || | || || || | || |||||||| | ||| |
|
|
| T |
4258945 |
ggtctgactccagtggaaggtgatggcgatgttactcaagacgtaccctccctttctcaatctataagaaagaacttccttcagccctttggtgaacttc |
4259044 |
T |
|
| Q |
317 |
ttgctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgattgcaatatggcatttacagtagatgctgctgaaga |
416 |
Q |
| |
|
||||||||||| | ||||| || ||| ||||| || | || || ||||||||||||||||||||||| | ||| |||||| || | ||||||||||| |
|
|
| T |
4259045 |
ttgctaaacttcaagactcagccactactggtattgttccacctgttacttgcttagtttctgattgttacatgtcatttagtatacaagctgctgaaga |
4259144 |
T |
|
| Q |
417 |
acatgcactcccaattgttctctt |
440 |
Q |
| |
|
|||||||||||||||||| |||| |
|
|
| T |
4259145 |
gcatgcactcccaattgttttctt |
4259168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 40 - 203
Target Start/End: Complemental strand, 4603646 - 4603483
Alignment:
| Q |
40 |
ccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaatacaatc |
139 |
Q |
| |
|
|||| |||| ||||||||||||||||| || |||||||||||| ||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
4603646 |
ccatatccacttcaaggccatatcaatccaatgttgaaactagcaaaactatttcaccttagaggatttcacataacctttgtcaacaccgaatacaatc |
4603547 |
T |
|
| Q |
140 |
acaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttga |
203 |
Q |
| |
|
||||||| |||||||||||||||||||| |||||||| || || |||||||||||||||||||| |
|
|
| T |
4603546 |
acaaacgtttgctcaaatcaagaggtcctaatgccttagacggcttcactgattttagctttga |
4603483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 45 - 257
Target Start/End: Complemental strand, 4594541 - 4594329
Alignment:
| Q |
45 |
tccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaatacaatcacaaa |
144 |
Q |
| |
|
|||| ||||||| ||||| ||| ||||||| ||||| | |||||| |||||||||||||| ||| ||||||||||||||||||| ||||||||||| ||| |
|
|
| T |
4594541 |
tccacttcaaggacatataaatccattgttcaaacttgcaaaacttcttcaccttagaggatttcacataacctttgtcaacactgaatacaatcataaa |
4594442 |
T |
|
| Q |
145 |
cgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgatggtttaactccaacagatggtgatggcg |
244 |
Q |
| |
|
|| ||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||| || || || |||||| |||| |||| || |||||||| | |
|
|
| T |
4594441 |
cgtttgctcaaatcaagaggtccaaatgccttagatggtttccctggttttagctttgaaaccataccagatggtctaacaccaatggaaggtgatggtg |
4594342 |
T |
|
| Q |
245 |
atgttagtcaaga |
257 |
Q |
| |
|
||||||||||||| |
|
|
| T |
4594341 |
atgttagtcaaga |
4594329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 18 - 221
Target Start/End: Complemental strand, 4462765 - 4462562
Alignment:
| Q |
18 |
aaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacc |
117 |
Q |
| |
|
|||||||||||| ||||| | |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
4462765 |
aaagccacatgctgtgttgattccatgtccatcccaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggttttcacataacc |
4462666 |
T |
|
| Q |
118 |
tttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgatg |
217 |
Q |
| |
|
||||||||||| |||||||||||||| |||||||||| ||||||||||| ||| | | |||||||||||||| |||| ||||||||| ||||| ||| |
|
|
| T |
4462665 |
tttgtcaacactgaatacaatcacaattgcttgctcaattcaagaggtcctaattctctagatggtttcactgactttaactttgagaccattccaaatg |
4462566 |
T |
|
| Q |
218 |
gttt |
221 |
Q |
| |
|
|||| |
|
|
| T |
4462565 |
gttt |
4462562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 91 - 441
Target Start/End: Complemental strand, 4599648 - 4599299
Alignment:
| Q |
91 |
cttcaccttagaggcttttacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactg |
190 |
Q |
| |
|
|||||||||||||| |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||| ||| | | |||||||||||| |
|
|
| T |
4599648 |
cttcaccttagaggattttacataaccttcgtgaacaccgagtacaatcacaaacgcttgctcaaatcaagaggtcctaattctcgtaatggtttcactg |
4599549 |
T |
|
| Q |
191 |
attttagctttgagactattcctgatggtttaactccaacagatggtgatggcgatgttagtcaagatttacgtgctctttgtctatcaatcatgaacaa |
290 |
Q |
| |
|
||||| ||| ||||||||||| |||||||||||||||| |||||||||||| ||||||| || || || | |||| ||| |||||||| || || |
|
|
| T |
4599548 |
atttttccttcgagactattccagatggtttaactccaatagatggtgatggtgatgttacacaggacataaattctctctgtaaatcaatcagaaataa |
4599449 |
T |
|
| Q |
291 |
ttttccccaattctttggtgtatttcttgctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgattgcaatatg |
390 |
Q |
| |
|
|| | |||| ||| | | | ||||||||| ||| |||| ||| |||||||||||||||||||||||||||||||||||| || |||||| || ||| |
|
|
| T |
4599448 |
cttcctccaaccatttcgcgaacttcttgctagactctatgagtcttctactgctggtcttatccctccagttacttgcttag-ttatgattggaacatg |
4599350 |
T |
|
| Q |
391 |
gcatttacagtagatgctgctgaagaacatgcactcccaattgttctcttt |
441 |
Q |
| |
|
| ||||| || | | ||||||||||| | |||| || |||||||||||| |
|
|
| T |
4599349 |
tcctttactatacaagttgctgaagaactttcacttcctattgttctcttt |
4599299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 122 - 442
Target Start/End: Original strand, 4298172 - 4298492
Alignment:
| Q |
122 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgatggttt |
221 |
Q |
| |
|
|||||||||||||||||||||||| | ||||| ||||||| |||||||| || |||||||||||||| | |||||||||||||||||||| |||||| | |
|
|
| T |
4298172 |
tcaacaccgaatacaatcacaaacacctgctcgaatcaaggggtccaaaagcttttgatggtttcaccaactttagctttgagactattccagatggtct |
4298271 |
T |
|
| Q |
222 |
aactccaacagatggtgatggcgatgttagtcaagatttacgtgctctttgtctatcaatcatgaacaattttccccaattctttggtgtatttcttgct |
321 |
Q |
| |
|
|||||||| || |||||||| ||||||| |||||| ||| |||||| | |||||||| || || || | || |||||||| | |||||||| |
|
|
| T |
4298272 |
gactccaacggaaggtgatggagatgttactcaagacataccatctctttcccaatcaatcagaaagaacttccttcagccctttggtgaacttcttgct |
4298371 |
T |
|
| Q |
322 |
aaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgattgcaatatggcatttacagtagatgctgctgaagaacatg |
421 |
Q |
| |
|
|||||| ||| ||||| |||||||||||| | || |||||||||||||||||| |||||| ||| ||||||| || | ||||| |||||||||| |
|
|
| T |
4298372 |
aaacttcgtgattctgccactgctggtcttgtaccaccagttacttgcttagttgctgattttttaatgtcatttaccatacaagctgcggaagaacatg |
4298471 |
T |
|
| Q |
422 |
cactcccaattgttctctttt |
442 |
Q |
| |
|
||||||||||| ||||||||| |
|
|
| T |
4298472 |
cactcccaattattctctttt |
4298492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 324 - 566
Target Start/End: Complemental strand, 4462462 - 4462218
Alignment:
| Q |
324 |
acttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgattgcaatatggcatttacagtagatgctgctgaagaacatgca |
423 |
Q |
| |
|
|||| ||| |||||| ||||| | |||||||||||| ||||||||| ||||||||||||| | ||| |||||||||| ||||| |||||| ||| |||| |
|
|
| T |
4462462 |
acttgatgcctctgccactgccgatcttatccctccggttacttgcatagtttctgattgttacatgccatttacagtggatgccgctgaacaacgtgca |
4462363 |
T |
|
| Q |
424 |
ctcccaattgttctcttttccccatgtagtgcatcttacttctactctacttttcacattactaaattgtttcagaatggtgtgctaccactcaaaggta |
523 |
Q |
| |
|
|||||||| |||||||||||||| ||||||| || || | |||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4462362 |
ctcccaatcgttctcttttccccggtcagtgcatgttgctcactcactacttctcacattcctaaattgtttcagaatggtgtgctgccactcaaaggta |
4462263 |
T |
|
| Q |
524 |
-atcat-tatgttccctttttcatcctaagggaggtatgttgtgt |
566 |
Q |
| |
|
||||| | ||||||||||||| ||||||| ||||| |||||||| |
|
|
| T |
4462262 |
tatcatctttgttccctttttcttcctaagagaggtttgttgtgt |
4462218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 45 - 258
Target Start/End: Complemental strand, 4565560 - 4565347
Alignment:
| Q |
45 |
tccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaatacaatcacaaa |
144 |
Q |
| |
|
|||| ||||||| ||||| ||| ||||||| ||||| | |||||| |||||||||||||| ||| | ||||||||||||||||| ||||||||||| ||| |
|
|
| T |
4565560 |
tccatttcaaggacatataaatccattgttcaaacttgcaaaacttcttcaccttagaggatttcatataacctttgtcaacactgaatacaatcataaa |
4565461 |
T |
|
| Q |
145 |
cgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgatggtttaactccaacagatggtgatggcg |
244 |
Q |
| |
|
|| ||||| ||||||||||||||||||||||| ||||||| | || |||| ||||||| || || || |||||| |||| || | ||| |||||||| | |
|
|
| T |
4565460 |
cgattgctaaaatcaagaggtccaaatgccttagatggttcccgtggtttttgctttgaaaccataccagatggtctaacaccgatagaaggtgatggtg |
4565361 |
T |
|
| Q |
245 |
atgttagtcaagat |
258 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
4565360 |
atgttagtcaagat |
4565347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 4497814 - 4497899
Alignment:
| Q |
17 |
aaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttaga |
102 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| || |||||||||||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
4497814 |
aaaagccacatgcagtgttaactccatttccaatttaaggccatatcaatccattgttgaaactaggaaaattacttcaccttaga |
4497899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 21 - 189
Target Start/End: Original strand, 4255394 - 4255550
Alignment:
| Q |
21 |
gccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataaccttt |
120 |
Q |
| |
|
||||||||| ||||| | |||| |||||||||||||||||||||| ||| || ||||||| |||| ||||||| |||| ||||||| |
|
|
| T |
4255394 |
gccacatgctgtgttgattccatatccagttcaaggccatatcaatctattattcaaactagcaaaattacttcatcttaaaggcttt------------ |
4255481 |
T |
|
| Q |
121 |
gtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcact |
189 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||| |
|
|
| T |
4255482 |
gtcaacaccgaatacaatcacaaacgcttgctcgaatcaagaggtccaaaagcctttgatggttccact |
4255550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 360 - 447
Target Start/End: Original strand, 4255551 - 4255638
Alignment:
| Q |
360 |
agttacttgcttagtttctgattgcaatatggcatttacagtagatgctgctgaagaacatgcactcccaattgttctcttttcccca |
447 |
Q |
| |
|
|||||||||||||||||||||||| | ||| ||||||| || | ||||||||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
4255551 |
agttacttgcttagtttctgattgttacatgtcatttaccatacaagctgctgaagagcatgcactcccaattgttctcctttcccca |
4255638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 319 - 431
Target Start/End: Original strand, 4513853 - 4513965
Alignment:
| Q |
319 |
gctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgattgcaatatggcatttacagtagatgctgctgaagaac |
418 |
Q |
| |
|
|||||||||||||||||||| | || |||||||| ||| ||||||||||||||||||||||| | |||| ||||||| | | | ||||||||||| |
|
|
| T |
4513853 |
gctaaacttaatgactctgcaaaagccggtcttataccttttgttacttgcttagtttctgattgtattatgccatttactacacaagttgctgaagaac |
4513952 |
T |
|
| Q |
419 |
atgcactcccaat |
431 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4513953 |
ttgcactcccaat |
4513965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 166
Target Start/End: Original strand, 4483534 - 4483569
Alignment:
| Q |
131 |
aatacaatcacaaacgcttgctcaaatcaagaggtc |
166 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| |
|
|
| T |
4483534 |
aatacaatcacaaacgtttgctcaaatcaagaggtc |
4483569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 4493459 - 4493401
Alignment:
| Q |
22 |
ccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaact |
80 |
Q |
| |
|
|||||||||||||| | |||||||||| |||||| |||||||||||| || ||||||| |
|
|
| T |
4493459 |
ccacatgcagtgttgattccatttccagctcaaggtcatatcaatgcaatgctgaaact |
4493401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 383
Target Start/End: Complemental strand, 4507173 - 4507104
Alignment:
| Q |
314 |
ttcttgctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgattg |
383 |
Q |
| |
|
|||| |||| |||| |||||||||| | |||||||| | ||||| ||||||||||||||||||||||| |
|
|
| T |
4507173 |
ttctagctagacttgatgactctgcgaaatctggtcttgtgcctcctgttacttgcttagtttctgattg |
4507104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 151; Significance: 1e-79; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 40 - 457
Target Start/End: Original strand, 2043 - 2463
Alignment:
| Q |
40 |
ccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaatacaatc |
139 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||| ||||||| ||| || |||||||||||||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
2043 |
ccatatccagttcaaggccatatcaatccattgttcaaactagcaaagcttcttcaccttagaggctttcacataacctttgtcaacactgaatacaatc |
2142 |
T |
|
| Q |
140 |
acaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgatggtttaactcca---acagatgg |
236 |
Q |
| |
|
| |||||||||||||||||||||||||| ||||| ||||||||||| |||||||| |||| ||||||||||| ||||||||||||||| ||||| |
|
|
| T |
2143 |
ataaacgcttgctcaaatcaagaggtcctaatgctcttgatggtttcgctgatttttgcttcgagactattcccgatggtttaactccagtggaagatga |
2242 |
T |
|
| Q |
237 |
tgatggcgatgttagtcaagatttacgtgctctttgtctatcaatcatgaacaattttccccaattctttggtgtatttcttgctaaacttaatgactct |
336 |
Q |
| |
|
|||||| ||||||||||||| ||| |||||||| |||||||| || || || | || |||||| | | | ||||||||| |||| | || ||| |
|
|
| T |
2243 |
tgatggtaatgttagtcaagacatactctctctttgtaaatcaatcagaaaaaacttccttcacttctttcgcgaacttcttgctagacttgacgagtct |
2342 |
T |
|
| Q |
337 |
gctactgctggtcttatccctccagttacttgcttagtttctgattgcaatatggcatttacagtagatgctgctgaagaacatgcactcccaattgttc |
436 |
Q |
| |
|
|| | | ||||||||||||||||||| ||| |||||||||||||||| | ||| ||||||| || | |||||||||||| ||||||||||||| ||| |
|
|
| T |
2343 |
gccaattctggtcttatccctccagtaactagcttagtttctgattgttacatgtcatttaccatacaagctgctgaagaatatgcactcccaatccttc |
2442 |
T |
|
| Q |
437 |
tcttttccccatgtagtgcat |
457 |
Q |
| |
|
| | ||| ||| ||||||||| |
|
|
| T |
2443 |
tttattcgccaggtagtgcat |
2463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 137; Significance: 3e-71; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 22 - 274
Target Start/End: Complemental strand, 1282987 - 1282735
Alignment:
| Q |
22 |
ccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttg |
121 |
Q |
| |
|
|||||||| ||||| | |||| ||||| |||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1282987 |
ccacatgctgtgttgattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaactacttcaccttagaggcttttacataacctttg |
1282888 |
T |
|
| Q |
122 |
tcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgatggttt |
221 |
Q |
| |
|
| || || ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| || || || |||||| | |
|
|
| T |
1282887 |
ttaatactgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgccctagatggtttcactgattttagctttgaaaccatcccagatggtct |
1282788 |
T |
|
| Q |
222 |
aactccaacagatggtgatggcgatgttagtcaagatttacgtgctctttgtc |
274 |
Q |
| |
|
||| || ||| |||||||| |||||||||||| || ||| | ||||||||| |
|
|
| T |
1282787 |
aacatcactagaaggtgatggtgatgttagtcaacatgtaccttctctttgtc |
1282735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 136; Significance: 1e-70; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 17 - 383
Target Start/End: Complemental strand, 2383 - 2014
Alignment:
| Q |
17 |
aaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataac |
116 |
Q |
| |
|
|||| |||||||| ||||| | |||| |||||||||||||||||||||| |||| || ||||||| ||| || |||||||||||||||||| ||||||| |
|
|
| T |
2383 |
aaaaaccacatgctgtgttgattccatatccagttcaaggccatatcaatccattattcaaactagcaaagcttcttcaccttagaggctttcacataac |
2284 |
T |
|
| Q |
117 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgat |
216 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| |||||||| |||| ||||||||||| ||| |
|
|
| T |
2283 |
ctttgtcaacactgaatacaatcataaacgcttgctcaaatcaagaggtcctaatgctcttgatggtttcgctgatttttgcttcgagactattcccgat |
2184 |
T |
|
| Q |
217 |
ggtttaactcca---acagatggtgatggcgatgttagtcaagatttacgtgctctttgtctatcaatcatgaacaattttccccaattctttggtgtat |
313 |
Q |
| |
|
|||||||||||| ||||| |||||| ||||||||||||| ||| |||||||| |||||||| || || || | || |||||| | | | |
|
|
| T |
2183 |
ggtttaactccagtggaagatgatgatggtaatgttagtcaagacatactctctctttgtaaatcaatcagaaaaaacttccttcacttctttcgcgaac |
2084 |
T |
|
| Q |
314 |
ttcttgctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgattg |
383 |
Q |
| |
|
||||||||| |||| | || ||||| | | ||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
2083 |
ttcttgctagacttgacgagtctgccaattctggtcttatccctccagtaactagcttagtttctgattg |
2014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 113; Significance: 7e-57; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 23 - 255
Target Start/End: Complemental strand, 1311 - 1079
Alignment:
| Q |
23 |
cacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgt |
122 |
Q |
| |
|
||||||| ||||| | |||| ||||| |||||||||||||||| ||||||| ||||||| |||||| ||||||||||||||| | | |||||| ||| |
|
|
| T |
1311 |
cacatgctgtgttcattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaacttattcaccttagaggctctcatgtaacctatgt |
1212 |
T |
|
| Q |
123 |
caacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgatggttta |
222 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||| || || || |||||| || |
|
|
| T |
1211 |
caacactgaatacaatcacaaacgtttgctcaaatcaagaggtccaactgccttggatggtttcactgattttagctttgaaaccatcccagatggtcta |
1112 |
T |
|
| Q |
223 |
actccaacagatggtgatggcgatgttagtcaa |
255 |
Q |
| |
|
|| ||| ||| |||||||| |||||||||||| |
|
|
| T |
1111 |
acaccactagaaggtgatggtgatgttagtcaa |
1079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 113; Significance: 7e-57; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 23 - 255
Target Start/End: Complemental strand, 1676074 - 1675842
Alignment:
| Q |
23 |
cacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgt |
122 |
Q |
| |
|
||||||| ||||| | |||| ||||| |||||||||||||||| ||||||| ||||||| |||||| ||||||||||||||| | | |||||| ||| |
|
|
| T |
1676074 |
cacatgctgtgttcattccatatccagctcaaggccatatcaatccattgttcaaactagcaaaacttattcaccttagaggctctcatgtaacctatgt |
1675975 |
T |
|
| Q |
123 |
caacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgatggttta |
222 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||| || || || |||||| || |
|
|
| T |
1675974 |
caacactgaatacaatcacaaacgtttgctcaaatcaagaggtccaactgccttggatggtttcactgattttagctttgaaaccatcccagatggtcta |
1675875 |
T |
|
| Q |
223 |
actccaacagatggtgatggcgatgttagtcaa |
255 |
Q |
| |
|
|| ||| ||| |||||||| |||||||||||| |
|
|
| T |
1675874 |
acaccactagaaggtgatggtgatgttagtcaa |
1675842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 17 - 225
Target Start/End: Original strand, 20862379 - 20862587
Alignment:
| Q |
17 |
aaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataac |
116 |
Q |
| |
|
|||| ||||||||||||||||| |||| |||| ||||||| ||||||||| || |||| ||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
20862379 |
aaaaaccacatgcagtgttaactccatatccacttcaaggtcatatcaatccaatgttaaaactagcaaaactacttcaccttagaggcttttacataac |
20862478 |
T |
|
| Q |
117 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgat |
216 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||| || |||| ||||||| ||||||||||||||||||| ||| |||||||||| |||| ||| |
|
|
| T |
20862479 |
atttgtcaatactgaatacaatcacaaacgcttgcttaagtcaatgggtccaataccctttgatggtttcactgactttcgctttgagaccgttccagat |
20862578 |
T |
|
| Q |
217 |
ggtttaact |
225 |
Q |
| |
|
|||| |||| |
|
|
| T |
20862579 |
ggttcaact |
20862587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 190 - 283
Target Start/End: Original strand, 16685029 - 16685122
Alignment:
| Q |
190 |
gattttagctttgagactattcctgatggtttaactccaacagatggtgatggcgatgttagtcaagatttacgtgctctttgtctatcaatca |
283 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||| ||| ||||||||| |||||||| |
|
|
| T |
16685029 |
gattttagctttgagactattccatatggtttacctccaacggatggtgatggcgatgttagtcaagacatacacgctctttgtaaatcaatca |
16685122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 314 - 455
Target Start/End: Original strand, 20862670 - 20862811
Alignment:
| Q |
314 |
ttcttgctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgattgcaatatggcatttacagtagatgctgctga |
413 |
Q |
| |
|
||||||| |||||| |||||||| | | |||||||||| ||||| ||||||||||||||||||||| | ||| || |||| || | | |||||| |
|
|
| T |
20862670 |
ttcttgccaaacttcatgactcttccaaatctggtcttatacctcctgttacttgcttagtttctgatagtttcatgtcagttaccatacaagttgctga |
20862769 |
T |
|
| Q |
414 |
agaacatgcactcccaattgttctcttttccccatgtagtgc |
455 |
Q |
| |
|
||||| ||||||||||||||||||| || ||||| |||||| |
|
|
| T |
20862770 |
agaacttgcactcccaattgttctccttatcccatctagtgc |
20862811 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 381
Target Start/End: Original strand, 16685190 - 16685227
Alignment:
| Q |
344 |
ctggtcttatccctccagttacttgcttagtttctgat |
381 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
16685190 |
ctggtcttgtccctccagttacttgcatagtttctgat |
16685227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 106; Significance: 1e-52; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 45 - 459
Target Start/End: Complemental strand, 24104626 - 24104208
Alignment:
| Q |
45 |
tccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataacctttgtcaacaccgaatacaatcacaaa |
144 |
Q |
| |
|
|||| ||||||| ||||||||||||||||| ||||||||||| || |||||||||||||||||| |||||||||| || ||||||||||||||||||||| |
|
|
| T |
24104626 |
tccatttcaaggtcatatcaatgcattgttcaaactaggaaagcttcttcaccttagaggctttcacataaccttcgtgaacaccgaatacaatcacaaa |
24104527 |
T |
|
| Q |
145 |
cgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgatggtttaactccaacagatggtgatggcg |
244 |
Q |
| |
|
||||||||| ||||||||| ||| ||| | |||||||||||| ||| |||| ||||||||| || || |||||| ||||||||| || || |||| | |
|
|
| T |
24104526 |
cgcttgctcgaatcaagagatcctaattctcttgatggtttcaatgactttaactttgagaccataccagatggtctaactccaatggaaggcaatggtg |
24104427 |
T |
|
| Q |
245 |
atgttagtcaagatttacgtgctctttgtctatcaatcatgaacaattttccccaattctttggtgtatttcttgctaaacttaatgactctgctactgc |
344 |
Q |
| |
|
|||||| |||||| || ||||| | ||||||||||| || || | || ||||| || | ||||| ||| |||| || | ||||| | || |
|
|
| T |
24104426 |
atgttactcaagacatataccctcttgtgcaatcaatcatgacgaacttccttcagccctttgatgaacttcttactagacttcatcaatctgccaatga |
24104327 |
T |
|
| Q |
345 |
tggtcttatccctccagttacttgcttagtttctgattgcaatatggcatttacag----tagatgctgctgaagaacatgcactcccaattgttctctt |
440 |
Q |
| |
|
|||| |||| || ||| |||||||||||||||| ||||| | ||| ||||||||| | ||||||| |||||||||||||||||||||| || |||| |
|
|
| T |
24104326 |
tggtgttattccaccaattacttgcttagtttcggattgttacatgccatttacagttgatcgatgctgttgaagaacatgcactcccaattcttttctt |
24104227 |
T |
|
| Q |
441 |
ttccccatgtagtgcatct |
459 |
Q |
| |
|
||| ||||| | ||||||| |
|
|
| T |
24104226 |
ttctccatgcaatgcatct |
24104208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 105; Significance: 4e-52; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 17 - 257
Target Start/End: Complemental strand, 3088304 - 3088064
Alignment:
| Q |
17 |
aaaagccacatgcagtgttaacaccatttccagttcaaggccatatcaatgcattgttgaaactaggaaaactacttcaccttagaggcttttacataac |
116 |
Q |
| |
|
||||||||||||| ||||| | |||| |||| ||||||| ||||| ||| ||||||| ||||||| |||||| |||||||||| ||||||| ||||||| |
|
|
| T |
3088304 |
aaaagccacatgctgtgttgattccatatccacttcaaggtcatataaatccattgttaaaactagcaaaacttcttcaccttaaaggctttcacataac |
3088205 |
T |
|
| Q |
117 |
ctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatgcctttgatggtttcactgattttagctttgagactattcctgat |
216 |
Q |
| |
|
||||||||| ||||||||||||||||| || ||||| |||||||||||| | ||| | |||||||||||||||||||| |||||||||||| | ||| |
|
|
| T |
3088204 |
ctttgtcaataccgaatacaatcacaaccgtttgcttaaatcaagaggttctaattctcttgatggtttcactgattttgtctttgagactatccaagat |
3088105 |
T |
|
| Q |
217 |
ggtttaactccaacagatggtgatggcgatgttagtcaaga |
257 |
Q |
| |
|
||| ||||||||| || ||| |||| |||||||||||||| |
|
|
| T |
3088104 |
ggtctaactccaatggaaggtaatggtgatgttagtcaaga |
3088064 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 329 - 443
Target Start/End: Complemental strand, 3087992 - 3087878
Alignment:
| Q |
329 |
atgactctgctactgctggtcttatccctccagttacttgcttagtttctgattgcaatatggcatttacagtagatgctgctgaagaacatgcactccc |
428 |
Q |
| |
|
|||||||||| |||||||||||| || ||||||||||||||||| |||||| | ||| ||||||| || | | ||||||||| |||||||||| |
|
|
| T |
3087992 |
atgactctgccgatgctggtcttattccaccagttacttgcttagtagctgatttttacatgccatttaccatacaagttgctgaagagaatgcactccc |
3087893 |
T |
|
| Q |
429 |
aattgttctcttttc |
443 |
Q |
| |
|
||| |||||||||| |
|
|
| T |
3087892 |
aatccttctcttttc |
3087878 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 314 - 444
Target Start/End: Original strand, 3388 - 3518
Alignment:
| Q |
314 |
ttcttgctaaacttaatgactctgctactgctggtcttatccctccagttacttgcttagtttctgattgcaatatggcatttacagtagatgctgctga |
413 |
Q |
| |
|
|||||| ||||||| |||||||||| |||||||||||| | || | |||||||||| |||| ||||||| | ||| ||||||| || | |||||||| |
|
|
| T |
3388 |
ttcttgttaaacttcatgactctgccactgctggtcttgttccacaagttacttgcatagtcgctgattgttacatgccatttaccatacaagctgctga |
3487 |
T |
|
| Q |
414 |
agaacatgcactcccaattgttctcttttcc |
444 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
3488 |
agaacatgcactcccaattgttctcttttcc |
3518 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 1349571 - 1349641
Alignment:
| Q |
102 |
aggcttttacataacctttgtcaacaccgaatacaatcacaaacgcttgctcaaatcaagaggtccaaatg |
172 |
Q |
| |
|
|||||| |||||||| ||||||||||| |||| ||| ||||||||||| |||||||| | |||||| |||| |
|
|
| T |
1349571 |
aggcttctacataacatttgtcaacactgaattcaaccacaaacgcttactcaaatccataggtcctaatg |
1349641 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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